Cp4.1LG13g03810 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g03810
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	RING-CH-type domain-containing protein
Location	Cp4.1LG13: 4006183 .. 4007370 (-)
RNA-Seq Expression	Cp4.1LG13g03810
Synteny	Cp4.1LG13g03810

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGTAATGCTCGTGCAACAATTCATACAATGTATGTTTGTTCTGCTTCAACTTGAGAATGATTGACCCCTATTCCATTGCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTGTAAGTTTTCTTTCTCCCTTGACACATGAAGTTCTTTCCAAACGCACAATTTTTGTAATGGTGATCATAAGATGTTTTCGAAATAACACGTGTTTAAGTTCGTGTTAGGGGAATATCAAAATCTGAACCACATGTTTCTCTTTTTCTTTGTAGTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGGTGAGAAATCTCTACTTTCAAACAAATGCAAAACCAAGATTTGTGCACGAAGTTAAACTATTCCCTTTCAATGACAGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCGTAAGCGTTCGTATACAATTAGCAGACATTTACATGCCATCCTCTCAGTGATAACTCTATTGTATTAATGGTTTCTTGTGTTTGGATGACTATGATCAGCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCGTTCGGTCAGTTTCATAGCAGCAGAAGGTCTGAGAAATTGGACTGCGAGCTGAAGAATGGTGTTGGTATGGGGGGGATACATGGCAGTAGGCTTTGCTTTGTGTATAGATGGGTATAGATGTTTGAAGTCGTTATGCAGTTTAGTTTATTAAATGATTGGTTTGTGTTAGAAATTCTTTGTACAGAAAAGAAATGAATGAATGATATATGCACATAATATGTAAATCTCTTACTGTTCGTTAGTTANTTTTTTTTTTTTTTTTTATTATTTCTTTTAGTCACATAAAATGTATGTCTAA

mRNA sequence

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCTCACATAAAATGTATGTCTAA

Coding sequence (CDS)

CAATTCAAACCAGGTTACACAGCTTCTCCTCCATTATTCGAAATGGGGCGTATTCCAATGAGCTTCAGGGGGAACTGGGAGATTTCTCGAAGGAACTTGGATAGTTCTAGCTATATAGCAATGGTTTCTTCAAACCGCAATGTTGTTGATACCGACTATGATGAGTTCTCAGATTCTGCTGCAACCAGCGTGCTATGCTGCCATTCGTTTGCTATTGTTTTCATGGTTCTCCTGGTTTTGAGGCACTCTCTTCCCCTCATATTCAATGAAACCGGTGGTTACTCTTTCCCTCTGCTTCTGTCGATTTGCCTGCGAAGTTTACTGATCTTTCTACCAATATACGTTATGTTCAAAGTAGTCTCTGCAGTTCATCGCCGTCGACTTCTCCTGGCTACATCTTCTAGTTCATCCATTCATTCAACCAGCATAGTTAGGAGTTCGACATCCGTATCGTCCCAACCTCAGCCTTACATTATCCGCTCACATAAAATGTATGTCTAA

Protein sequence

QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVVSAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIRSHKMYV

Homology

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: XP_023551194.1 (uncharacterized protein LOC111809081 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297 bits (761), Expect = 1.22e-99
Identity = 160/162 (98.77%), Postives = 160/162 (98.77%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA
Sbjct: 93  QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 152

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV
Sbjct: 153 ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 212

Query: 121 SAVHRRRLL--LATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 160
           SAVHRRRLL  LATSSSSSIHSTSIVRSSTSVSSQPQPYIIR
Sbjct: 213 SAVHRRRLLVSLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 254

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: KAG6579246.1 (putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 295 bits (755), Expect = 1.54e-97
Identity = 157/160 (98.12%), Postives = 158/160 (98.75%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFS SA
Sbjct: 178 QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSASA 237

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHSFAIVFMVLLVLRHSLPLIFNE+ GYSFPLLLSICLRSLLIFLPIYVMFKVV
Sbjct: 238 ATSVLCCHSFAIVFMVLLVLRHSLPLIFNESDGYSFPLLLSICLRSLLIFLPIYVMFKVV 297

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 160
           SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR
Sbjct: 298 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 337

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: XP_022993991.1 (uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima] >XP_022993993.1 uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima] >XP_022993994.1 uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima])

HSP 1 Score: 281 bits (719), Expect = 1.58e-93
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDT+YDEFS SA
Sbjct: 75  QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASA 134

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLC HSFAIVFMVLLVLRH+LPLIFNE+GGYSFPLLLSICLRSLLI LPIYVM KVV
Sbjct: 135 ATSVLCFHSFAIVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVV 194

Query: 121 SAVHRRRLLLATSSSSSIHSTS-IVRSSTSVSSQPQPYIIR 160
           SAVHRRRLLLATSSSSSIHSTS IVRSSTSVSSQPQPYIIR
Sbjct: 195 SAVHRRRLLLATSSSSSIHSTSSIVRSSTSVSSQPQPYIIR 235

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: XP_022993989.1 (uncharacterized protein LOC111489819 isoform X1 [Cucurbita maxima] >XP_022993990.1 uncharacterized protein LOC111489819 isoform X1 [Cucurbita maxima])

HSP 1 Score: 281 bits (719), Expect = 4.04e-93
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDT+YDEFS SA
Sbjct: 103 QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASA 162

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLC HSFAIVFMVLLVLRH+LPLIFNE+GGYSFPLLLSICLRSLLI LPIYVM KVV
Sbjct: 163 ATSVLCFHSFAIVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVV 222

Query: 121 SAVHRRRLLLATSSSSSIHSTS-IVRSSTSVSSQPQPYIIR 160
           SAVHRRRLLLATSSSSSIHSTS IVRSSTSVSSQPQPYIIR
Sbjct: 223 SAVHRRRLLLATSSSSSIHSTSSIVRSSTSVSSQPQPYIIR 263

[Close]

BLAST of Cp4.1LG13g03810 vs. NCBI nr
Match: XP_023522107.1 (uncharacterized protein LOC111785983 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271 bits (694), Expect = 4.92e-91
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 15  MGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAATSVLCCHSFAIVF 74
           MGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAATSVLCCHSFAIVF
Sbjct: 1   MGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAATSVLCCHSFAIVF 60

Query: 75  MVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVVSAVHRRRLLLATSS 134
           MVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVVSAVHRRRLLLATSS
Sbjct: 61  MVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVVSAVHRRRLLLATSS 120

Query: 135 SSSIHSTSIVRSSTSVSSQPQPYIIR 160
           SSSIHSTSIVRSSTSVSSQPQPYIIR
Sbjct: 121 SSSIHSTSIVRSSTSVSSQPQPYIIR 146

[Close]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL
Match: A0A6J1K1P4 (uncharacterized protein LOC111489819 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111489819 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 7.67e-94
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDT+YDEFS SA
Sbjct: 75  QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASA 134

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLC HSFAIVFMVLLVLRH+LPLIFNE+GGYSFPLLLSICLRSLLI LPIYVM KVV
Sbjct: 135 ATSVLCFHSFAIVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVV 194

Query: 121 SAVHRRRLLLATSSSSSIHSTS-IVRSSTSVSSQPQPYIIR 160
           SAVHRRRLLLATSSSSSIHSTS IVRSSTSVSSQPQPYIIR
Sbjct: 195 SAVHRRRLLLATSSSSSIHSTSSIVRSSTSVSSQPQPYIIR 235

[Close]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL
Match: A0A6J1K1N8 (uncharacterized protein LOC111489819 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489819 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 1.96e-93
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDT+YDEFS SA
Sbjct: 103 QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTEYDEFSASA 162

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLC HSFAIVFMVLLVLRH+LPLIFNE+GGYSFPLLLSICLRSLLI LPIYVM KVV
Sbjct: 163 ATSVLCFHSFAIVFMVLLVLRHTLPLIFNESGGYSFPLLLSICLRSLLIVLPIYVMLKVV 222

Query: 121 SAVHRRRLLLATSSSSSIHSTS-IVRSSTSVSSQPQPYIIR 160
           SAVHRRRLLLATSSSSSIHSTS IVRSSTSVSSQPQPYIIR
Sbjct: 223 SAVHRRRLLLATSSSSSIHSTSSIVRSSTSVSSQPQPYIIR 263

[Close]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL
Match: A0A1S4DSC9 (uncharacterized protein LOC103504564 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 7.35e-84
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q++PGYTA PPLFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRNV D  YDEFS SA
Sbjct: 75  QYEPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASA 134

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+GGYSFPLLL+ICLR+  IFLP+YVMFKVV
Sbjct: 135 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVV 194

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 160
            AVHRRRLLLATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 195 FAVHRRRLLLATSHSSLISSSSIARSSTSQSPQPQPYIIR 234

[Close]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL
Match: A0A5A7TTY1 (DUF3675 domain-containing protein/RINGv domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00260 PE=4 SV=1)

HSP 1 Score: 258 bits (658), Expect = 7.92e-84
Identity = 136/165 (82.42%), Postives = 146/165 (88.48%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q++PGYTA PPLFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRNV D  YDEFS SA
Sbjct: 110 QYEPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+GGYSFPLLL+ICLR+  IFLP+YVMFKVV
Sbjct: 170 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIRSHKMY 165
            AVHRRRLLLATS SS I S+SI RSSTS S QPQPYIIR  K +
Sbjct: 230 FAVHRRRLLLATSHSSLISSSSIARSSTSQSPQPQPYIIRVRKFH 274

[Close]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL
Match: A0A1S3CST5 (uncharacterized protein LOC103504564 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103504564 PE=4 SV=1)

HSP 1 Score: 256 bits (653), Expect = 2.31e-83
Identity = 135/160 (84.38%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q++PGYTA PPLFEMGRIPM+FRGNWEISRRNLDS SYIAMVSSNRNV D  YDEFS SA
Sbjct: 110 QYEPGYTAPPPLFEMGRIPMNFRGNWEISRRNLDSPSYIAMVSSNRNVADPGYDEFSASA 169

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
           ATSVLCCHS AI+FMVLLVLRHSLPLIFNE+GGYSFPLLL+ICLR+  IFLP+YVMFKVV
Sbjct: 170 ATSVLCCHSVAIIFMVLLVLRHSLPLIFNESGGYSFPLLLTICLRTFGIFLPVYVMFKVV 229

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYIIR 160
            AVHRRRLLLATS SS I S+SI RSSTS S QPQPYIIR
Sbjct: 230 FAVHRRRLLLATSHSSLISSSSIARSSTSQSPQPQPYIIR 269

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR 10
Match: AT2G01275.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           +FKP YTA PPL E+G +P+ FRGNW IS+R      +I +V ++   +D  Y     S+
Sbjct: 107 EFKPDYTAPPPLLELGHVPLHFRGNWGISQR---EHRFITVVPADSTFIDQPYPL---SS 166

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
            TS +CC S  ++FM LL+LRH+LPL+   +  + FPL   + LR L I LPIYV+ K V
Sbjct: 167 TTSFICCRSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAV 226

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYII 160
           +   R    L TS S     +S   + +    Q Q YII
Sbjct: 227 ATCRRHSRTLDTSPSD---DSSDEETDSWRLPQTQSYII 256

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR 10
Match: AT2G01275.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 103.2 bits (256), Expect = 2.0e-22
Identity = 65/159 (40.88%), Postives = 90/159 (56.60%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           +FKP YTA PPL E+G +P+ FRGNW IS+R      +I +V ++   +D  Y     S+
Sbjct: 107 EFKPDYTAPPPLLELGHVPLHFRGNWGISQR---EHRFITVVPADSTFIDQPYPL---SS 166

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
            TS +CC S  ++FM LL+LRH+LPL+   +  + FPL   + LR L I LPIYV+ K V
Sbjct: 167 TTSFICCRSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRILGIMLPIYVVTKAV 226

Query: 121 SAVHRRRLLLATSSSSSIHSTSIVRSSTSVSSQPQPYII 160
           +   R    L TS S     +S   + +    Q Q YII
Sbjct: 227 ATCRRHSRTLDTSPSD---DSSDEETDSWRLPQTQSYII 256

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR 10
Match: AT5G38070.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.8e-13
Identity = 53/160 (33.12%), Postives = 84/160 (52.50%), Query Frame = 0


Query: 1   QFKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSA 60
           Q+KPGYTA   LF    I M+F  +W I   +L +  ++    +     D D+D +S  +
Sbjct: 102 QYKPGYTAPRQLFHYTGISMNFGSDWGIEGLDLRNPYFLTWGDA-----DDDHDLYSFHS 161

Query: 61  ATSVLCCHSFAIVFMVLLVLRHSLPLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKVV 120
            TS++CC   A++F++LL LRHSLP++      +S  LL+   +R+L I L  YV FK  
Sbjct: 162 PTSLICCRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVRTLGILLIAYVFFKSF 221

Query: 121 SAVHRRRLLLAT--SSSSSIHSTSIVRSSTSVSSQPQPYI 159
             + R R    T  S  SS   T+  R   ++  +P+ ++
Sbjct: 222 IVIQRCRQERDTRLSGFSSDEETAPPRILMALPERPELHV 256

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR 10
Match: AT1G14260.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 2   FKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAA 61
           ++ GYT+ PP  +     +   G W IS  +LD    +A+  + R +++++YD+++ S  
Sbjct: 106 YQAGYTSPPPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDT 165

Query: 62  TSVLCCHSFAIVFMVLLVLRHSL--PLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKV 121
           +      S A++ M LL+LRH+L  P   +        +L    LR+    LP Y+M   
Sbjct: 166 SGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASA 225

Query: 122 VSAVHRRR 128
           +S +HRRR
Sbjct: 226 ISILHRRR 233

[Close]

BLAST of Cp4.1LG13g03810 vs. TAIR 10
Match: AT1G14260.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 66.6 bits (161), Expect = 2.1e-11
Identity = 38/128 (29.69%), Postives = 66/128 (51.56%), Query Frame = 0


Query: 2   FKPGYTASPPLFEMGRIPMSFRGNWEISRRNLDSSSYIAMVSSNRNVVDTDYDEFSDSAA 61
           ++ GYT+ PP  +     +   G W IS  +LD    +A+  + R +++++YD+++ S  
Sbjct: 106 YQAGYTSPPPPPQSEETTIDIGGGWRISGLDLDDPRLLAIAEAERQILESEYDDYTASDT 165

Query: 62  TSVLCCHSFAIVFMVLLVLRHSL--PLIFNETGGYSFPLLLSICLRSLLIFLPIYVMFKV 121
           +      S A++ M LL+LRH+L  P   +        +L    LR+    LP Y+M   
Sbjct: 166 SGAAFFRSAALILMTLLLLRHALTIPDYSDSEDDDPSSILSLFLLRAASFLLPCYIMASA 225

Query: 122 VSAVHRRR 128
           +S +HRRR
Sbjct: 226 ISILHRRR 233

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g03810 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG13g03810 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551194.1	1.22e-99	98.77	uncharacterized protein LOC111809081 [Cucurbita pepo subsp. pepo]	[more]
KAG6579246.1	1.54e-97	98.13	putative E3 ubiquitin ligase SUD1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022993991.1	1.58e-93	95.03	uncharacterized protein LOC111489819 isoform X2 [Cucurbita maxima] >XP_022993993...	[more]
XP_022993989.1	4.04e-93	95.03	uncharacterized protein LOC111489819 isoform X1 [Cucurbita maxima] >XP_022993990...	[more]
XP_023522107.1	4.92e-91	100.00	uncharacterized protein LOC111785983 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG13g03810 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1P4	7.67e-94	95.03	uncharacterized protein LOC111489819 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1K1N8	1.96e-93	95.03	uncharacterized protein LOC111489819 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S4DSC9	7.35e-84	84.38	uncharacterized protein LOC103504564 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5A7TTY1	7.92e-84	82.42	DUF3675 domain-containing protein/RINGv domain-containing protein OS=Cucumis mel...	[more]
A0A1S3CST5	2.31e-83	84.38	uncharacterized protein LOC103504564 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG13g03810 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01275.1	2.0e-22	40.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G01275.2	2.0e-22	40.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT5G38070.1	3.8e-13	33.13	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.1	2.1e-11	29.69	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G14260.2	2.1e-11	29.69	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022143	Protein of unknown function DUF3675	PFAM	PF12428	DUF3675	coord: 4..119 e-value: 7.3E-36 score: 123.3
None	No IPR available	PANTHER	PTHR23012:SF93	OS01G0121200 PROTEIN	coord: 1..158
IPR033275	E3 ubiquitin-protein ligase MARCH-like	PANTHER	PTHR23012	RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g03810.1	Cp4.1LG13g03810.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008270	zinc ion binding