Cp4.1LG13g03510 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g03510
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	nudix hydrolase 17, mitochondrial-like
Location	Cp4.1LG13: 3512813 .. 3514286 (+)
RNA-Seq Expression	Cp4.1LG13g03510
Synteny	Cp4.1LG13g03510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGATATCAACGACACCACTTTGGGGCCGTGGCCGCATAGCCTTTGTGCGCTTTATACGCTATCTTTACGCTTATCGCACGCACTCAAAGACCCTTCTTCCATTTCCCCGCGTCTTTATCTCTTCTATATATACATACATACCTCTCTTTCTTTTCTCATCTTCATCAACCAACACAATTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCTCTGCTTTCATCACACTCTGTTTCCGAACATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGGTGGGTTTAATTTGTTTCTTAATTCCCACCATTGATTTGTTCCTCTTTGTTCTTTCCCTGGAATTTCATCGATTAACATTGAAAAATGTTGGATTCTTGCAGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGTACTTCCAAATAAACAATTTCTTACTTTCCCCAATTGGGCTCCTGTTCTTAATCAATTTGCTTCCCCATTTCAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGGTAGGTTCTGTTTTGGGAATCCCCTTGTAAGTAATCCCTGTTTTGGAACAACATCAATGAGTGGTGATTCTTTGTTATGTTACATACAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTCGACAAAGAATATGGGTATGTTCTTGATTCCTAAACAAAAAATCCACTGATTTACATACCATAAACAGTGTATTAAGTTTTTTTTTTTTTGTGTGTGTGTGGTCAGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGATAGAAAGCTTTCTTGTAAATATGGGAAGGAAAAATGATGATGGTTGGGTTGGGTTGGGTCTGTTCATGAGGCGATACCCAACTTTCTTTTGTTCTTCACATGTATCTTCTTCAATTTTGAAAGAATACAAATGGATATGATTGATACCCAATTTGGGGTTAGCTCTCTCAATCAATACTTTCACTTTTCCACACTTGTTTCTTTCCTTCAGCCAAACTCTCCATTCCTTTTTAAACACTTTTCTTACTACAAATTGAAGTTATCCAAACTATGTGATTGCATGTGACTTGTCGAACGTTCATACGTGTAAACTATACTCATTTAACTTTGACGTTTTCATTTCAGTTGTGT

mRNA sequence

TTTGATATCAACGACACCACTTTGGGGCCGTGGCCGCATAGCCTTTGTGCGCTTTATACGCTATCTTTACGCTTATCGCACGCACTCAAAGACCCTTCTTCCATTTCCCCGCGTCTTTATCTCTTCTATATATACATACATACCTCTCTTTCTTTTCTCATCTTCATCAACCAACACAATTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCCATCTCTCTGCTTTCATCACACTCTGTTTCCGAACATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTCGACAAAGAATATGGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGATAGAAAGCTTTCTTGTAAATATGGGAAGGAAAAATGATGATGGTTGGGTTGGGTTGGGTCTGTTCATGAGGCGATACCCAACTTTCTTTTGTTCTTCACATGTATCTTCTTCAATTTTGAAAGAATACAAATGGATATGATTGATACCCAATTTGGGGTTAGCTCTCTCAATCAATACTTTCACTTTTCCACACTTGTTTCTTTCCTTCAGCCAAACTCTCCATTCCTTTTTAAACACTTTTCTTACTACAAATTGAAGTTATCCAAACTATGTGATTGCATGTGACTTGTCGAACGTTCATACGTGTAAACTATACTCATTTAACTTTGACGTTTTCATTTCAGTTGTGT

Coding sequence (CDS)

ATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTCGACAAAGAATATGGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGA

Protein sequence

MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL

Homology

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BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot
Match: Q9ZU95 (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 6.0e-67
Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CL SRTGR+ QRYN  G RQVVGC+PYRFK S DG KI D  EVLVISSQKG  LMFP
Sbjct: 6   MVCLASRTGRQFQRYN-KGRRQVVGCVPYRFKLSNDG-KISDEVEVLVISSQKGHALMFP 65

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RE LEEAGV+G VE +LGKW F+SKS+GTYYEG MFP+ V EQLE
Sbjct: 66  KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 125

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTS-MGEQKD 167
           LWPE+HVRQRIWM V EARE CR WWMKEALD+LVERL+S M + K+
Sbjct: 126 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPKE 170

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot
Match: Q9LQU5 (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.9e-65
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CLVSRTGR+ QRYN  G RQVVGCIPYR K S DG  I D +EVLVISSQKG  LMFP
Sbjct: 1   MVCLVSRTGRQSQRYN-KGRRQVVGCIPYRLKISSDGT-ISDEFEVLVISSQKGHALMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RESLEEAGVVG VE +LGKW F+SKS+GT+YEG+MFP+ V+E+LE
Sbjct: 61  KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLT 160
           LWPE+H+RQRIWM V EAR+ CR WWMKEALD+LV+RL+
Sbjct: 121 LWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLS 157

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BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot
Match: Q9LE73 (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-50
Identity = 86/165 (52.12%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGG 63
           LVSRTGR+LQRY+H G+RQVVGC+PYR+K  E         +VL++S+QKG+G++FPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWP 123
           WE DES+E+AA RE++EEAGV G++E +LGKW++ SK     ++GYMF L V ++ E WP
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWP 162

Query: 124 EKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           E  +RQR W+ + EAREVC++WWM+EAL+  +       + + G+
Sbjct: 163 EAEMRQRRWVSLDEAREVCQNWWMREALEAFINLKCLADDDESGN 207

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot
Match: Q8VY81 (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.9e-46
Identity = 85/155 (54.84%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQ-KGQGLMFPKG 63
           LVSRTGR+LQRYN  G+RQVVGC+PYR+K    G       EVL+IS+Q KG+G++ PKG
Sbjct: 44  LVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGG-----EIEVLLISAQKKGKGMLLPKG 103

Query: 64  GWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELW 123
           GWE+DES+E+AA RE++EEAGV G++E  LGKW++ SK     ++G+MFPL V +Q E+W
Sbjct: 104 GWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIW 163

Query: 124 PEKHVRQRIWMGVGEAREVCRHWWMKEALDILVER 158
           PE   RQR W+ + EA E+C++ WM+EAL+  + R
Sbjct: 164 PESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot
Match: Q52K88 (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.4e-33
Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSED----GVKIRDAYEVLVISSQKGQG 60
           M+ L +RTGR+ QRY++  FR V GCIPYR    E+     V   +  +VL+ISS     
Sbjct: 1   MSNLSARTGRDHQRYDN-NFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHD 60

Query: 61  LMFPKGGWELDESLEQAACRESLEEAGVVGKV-ESELGKWRFISKSQ--------GTYYE 120
           L+FPKGGWE DE++ +AA RE++EEAGV G + E  LG W F SKS         G   +
Sbjct: 61  LVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCK 120

Query: 121 GYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKD 167
           GYMF L V+E+L +WPE+  R+R W+ V EA E+CR+ WM+ AL+  +  +   G  K+
Sbjct: 121 GYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEEGSTKE 178

[Close]

BLAST of Cp4.1LG13g03510 vs. NCBI nr
Match: XP_023550921.1 (nudix hydrolase 17, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG7016787.1 Nudix hydrolase 17, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 356 bits (913), Expect = 4.50e-124
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170

[Close]

BLAST of Cp4.1LG13g03510 vs. NCBI nr
Match: KAG6579272.1 (Nudix hydrolase 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 355 bits (910), Expect = 1.29e-123
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFS+DGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSQDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170

[Close]

BLAST of Cp4.1LG13g03510 vs. NCBI nr
Match: XP_022939350.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 354 bits (908), Expect = 2.61e-123
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQK+GDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKNGDDL 170

[Close]

BLAST of Cp4.1LG13g03510 vs. NCBI nr
Match: XP_022973557.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 348 bits (893), Expect = 5.24e-121
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK SEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKCSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL-TSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL TSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLATSMGEQKDGDDL 171

[Close]

BLAST of Cp4.1LG13g03510 vs. NCBI nr
Match: XP_023540937.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327 bits (838), Expect = 1.47e-112
Identity = 154/168 (91.67%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK+SEDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYSEDGMKIDNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+G+VES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGQVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 168
           LWPEKHVR+RIWM VGEAREVCRHWWMKEALDILVERLTSMGEQK+ D
Sbjct: 121 LWPEKHVRERIWMSVGEAREVCRHWWMKEALDILVERLTSMGEQKEDD 168

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL
Match: A0A6J1FMG6 (nudix hydrolase 17, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111445290 PE=4 SV=1)

HSP 1 Score: 354 bits (908), Expect = 1.26e-123
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQK+GDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKNGDDL 170

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL
Match: A0A6J1I7U6 (nudix hydrolase 17, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111472089 PE=4 SV=1)

HSP 1 Score: 348 bits (893), Expect = 2.54e-121
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK SEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKCSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL-TSMGEQKDGDDL 170
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL TSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLATSMGEQKDGDDL 171

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL
Match: A0A6J1JHF5 (nudix hydrolase 17, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111487037 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 2.04e-112
Identity = 154/168 (91.67%), Postives = 162/168 (96.43%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK+SEDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYSEDGMKIDNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+G+VES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGQVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 168
           LWPEKHVR+RIWM VGEAREVCRHWWMKEALDILVERLTSMGEQK  D
Sbjct: 121 LWPEKHVRERIWMSVGEAREVCRHWWMKEALDILVERLTSMGEQKKDD 168

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL
Match: A0A6J1GN40 (nudix hydrolase 17, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111455440 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 2.04e-112
Identity = 153/168 (91.07%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK++EDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYNEDGMKIDNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+G+VES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGQVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 168
           LWPEKHVR+RIWM VGEAREVCRHWWMKEALDILVERLTSMGEQK+ D
Sbjct: 121 LWPEKHVRERIWMSVGEAREVCRHWWMKEALDILVERLTSMGEQKEDD 168

[Close]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL
Match: A0A6J1CZ00 (nudix hydrolase 17, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111015550 PE=4 SV=1)

HSP 1 Score: 324 bits (830), Expect = 1.18e-111
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK  EDG+KI D YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKXGEDGMKIDDEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+GKVE++LG WRFISKSQGTYYEGYMFPL VEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGKVETQLGNWRFISKSQGTYYEGYMFPLLVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170
           LWPEKHVRQRIWM V EAREVCRHWWMKEALDILV+RLTSMGEQKD DDL
Sbjct: 121 LWPEKHVRQRIWMTVAEAREVCRHWWMKEALDILVKRLTSMGEQKDNDDL 170

[Close]

BLAST of Cp4.1LG13g03510 vs. TAIR 10
Match: AT2G01670.1 (nudix hydrolase homolog 17 )

HSP 1 Score: 255.0 bits (650), Expect = 4.3e-68
Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CL SRTGR+ QRYN  G RQVVGC+PYRFK S DG KI D  EVLVISSQKG  LMFP
Sbjct: 6   MVCLASRTGRQFQRYN-KGRRQVVGCVPYRFKLSNDG-KISDEVEVLVISSQKGHALMFP 65

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RE LEEAGV+G VE +LGKW F+SKS+GTYYEG MFP+ V EQLE
Sbjct: 66  KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 125

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTS-MGEQKD 167
           LWPE+HVRQRIWM V EARE CR WWMKEALD+LVERL+S M + K+
Sbjct: 126 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPKE 170

[Close]

BLAST of Cp4.1LG13g03510 vs. TAIR 10
Match: AT1G14860.1 (nudix hydrolase homolog 18 )

HSP 1 Score: 250.0 bits (637), Expect = 1.4e-66
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CLVSRTGR+ QRYN  G RQVVGCIPYR K S DG  I D +EVLVISSQKG  LMFP
Sbjct: 1   MVCLVSRTGRQSQRYN-KGRRQVVGCIPYRLKISSDGT-ISDEFEVLVISSQKGHALMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RESLEEAGVVG VE +LGKW F+SKS+GT+YEG+MFP+ V+E+LE
Sbjct: 61  KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLT 160
           LWPE+H+RQRIWM V EAR+ CR WWMKEALD+LV+RL+
Sbjct: 121 LWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLS 157

[Close]

BLAST of Cp4.1LG13g03510 vs. TAIR 10
Match: AT1G18300.1 (nudix hydrolase homolog 4 )

HSP 1 Score: 200.3 bits (508), Expect = 1.3e-51
Identity = 86/165 (52.12%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGG 63
           LVSRTGR+LQRY+H G+RQVVGC+PYR+K  E         +VL++S+QKG+G++FPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWP 123
           WE DES+E+AA RE++EEAGV G++E +LGKW++ SK     ++GYMF L V ++ E WP
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWP 162

Query: 124 EKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           E  +RQR W+ + EAREVC++WWM+EAL+  +       + + G+
Sbjct: 163 EAEMRQRRWVSLDEAREVCQNWWMREALEAFINLKCLADDDESGN 207

[Close]

BLAST of Cp4.1LG13g03510 vs. TAIR 10
Match: AT1G73540.1 (nudix hydrolase homolog 21 )

HSP 1 Score: 185.3 bits (469), Expect = 4.2e-47
Identity = 85/155 (54.84%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQ-KGQGLMFPKG 63
           LVSRTGR+LQRYN  G+RQVVGC+PYR+K    G       EVL+IS+Q KG+G++ PKG
Sbjct: 44  LVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGG-----EIEVLLISAQKKGKGMLLPKG 103

Query: 64  GWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELW 123
           GWE+DES+E+AA RE++EEAGV G++E  LGKW++ SK     ++G+MFPL V +Q E+W
Sbjct: 104 GWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIW 163

Query: 124 PEKHVRQRIWMGVGEAREVCRHWWMKEALDILVER 158
           PE   RQR W+ + EA E+C++ WM+EAL+  + R
Sbjct: 164 PESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]

BLAST of Cp4.1LG13g03510 vs. TAIR 10
Match: AT3G26690.1 (nudix hydrolase homolog 13 )

HSP 1 Score: 141.7 bits (356), Expect = 5.3e-34
Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSED----GVKIRDAYEVLVISSQKGQG 60
           M+ L +RTGR+ QRY++  FR V GCIPYR    E+     V   +  +VL+ISS     
Sbjct: 1   MSNLSARTGRDHQRYDN-NFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHD 60

Query: 61  LMFPKGGWELDESLEQAACRESLEEAGVVGKV-ESELGKWRFISKSQ--------GTYYE 120
           L+FPKGGWE DE++ +AA RE++EEAGV G + E  LG W F SKS         G   +
Sbjct: 61  LVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCK 120

Query: 121 GYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKD 167
           GYMF L V+E+L +WPE+  R+R W+ V EA E+CR+ WM+ AL+  +  +   G  K+
Sbjct: 121 GYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEEGSTKE 178

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g03510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZU95	6.0e-67	74.25	Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2...	[more]
Q9LQU5	1.9e-65	74.21	Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2...	[more]
Q9LE73	1.8e-50	52.12	Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1	[more]
Q8VY81	5.9e-46	54.84	Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2...	[more]
Q52K88	7.4e-33	44.69	Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1...	[more]

BLAST of Cp4.1LG13g03510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550921.1	4.50e-124	100.00	nudix hydrolase 17, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo] >...	[more]
KAG6579272.1	1.29e-123	99.41	Nudix hydrolase 17, mitochondrial, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022939350.1	2.61e-123	99.41	nudix hydrolase 17, mitochondrial-like [Cucurbita moschata]	[more]
XP_022973557.1	5.24e-121	98.83	nudix hydrolase 17, mitochondrial-like [Cucurbita maxima]	[more]
XP_023540937.1	1.47e-112	91.67	nudix hydrolase 17, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG13g03510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FMG6	1.26e-123	99.41	nudix hydrolase 17, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A6J1I7U6	2.54e-121	98.83	nudix hydrolase 17, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC1114720...	[more]
A0A6J1JHF5	2.04e-112	91.67	nudix hydrolase 17, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC1114870...	[more]
A0A6J1GN40	2.04e-112	91.07	nudix hydrolase 17, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CZ00	1.18e-111	90.59	nudix hydrolase 17, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC1110...	[more]

BLAST of Cp4.1LG13g03510 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01670.1	4.3e-68	74.25	nudix hydrolase homolog 17	[more]
AT1G14860.1	1.4e-66	74.21	nudix hydrolase homolog 18	[more]
AT1G18300.1	1.3e-51	52.12	nudix hydrolase homolog 4	[more]
AT1G73540.1	4.2e-47	54.84	nudix hydrolase homolog 21	[more]
AT3G26690.1	5.3e-34	44.69	nudix hydrolase homolog 13	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 41..141 e-value: 6.7E-10 score: 39.1
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 19..155 score: 13.505208
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 5..157 e-value: 2.2E-30 score: 107.3
None	No IPR available	PANTHER	PTHR12629:SF62	NUDIX HYDROLASE 17, MITOCHONDRIAL	coord: 1..166
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 1..166
None	No IPR available	CDD	cd04666	Nudix_Hydrolase_9	coord: 22..148 e-value: 1.03593E-45 score: 144.295
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 62..83
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 12..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g03510.1	Cp4.1LG13g03510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016787	hydrolase activity