Cp4.1LG13g02030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG13g02030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Nudix hydrolase domain-containing protein
Location	Cp4.1LG13: 1499025 .. 1502419 (-)
RNA-Seq Expression	Cp4.1LG13g02030
Synteny	Cp4.1LG13g02030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCCTTCAGATTTAGATCCTTCTCTTGCCGAATGTCGGCCGATTCTGCAAATCGAAGCCAATCCATCACCTTGCCCTGCCAACACGAGCAACCTGTGCAGATTCTCGCTGCACCCGGTCTCTCCGATTCCGATTTACGGCAAGTTCGATTCCCTTTTTCCACTCGTCTTTTTCTACAAGAGAATAACTATTTTGTTGAGGCACTATTTAATTCTTGATATTGCAGGAATGCTGTGGATTCATCGTTGTTCAAACAATGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCCCAGGGAGCCATGTCTCTGAAGCGCGTTCTTATTCAGGTGGTGGAAAATAAACTCANTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAATCCACTTTTGGTCGAATGTAATGGAGGAATTTTTTGTTCAGGGAGTTGATATGTTCGGAAGCAGAATTGGGTTTCTCAAATTTCAAGCCGATATCTACGATAAGCAAACCGGGAAGAAGGTATTTGGCGATTTTGATAGATAATCATTACTTGGGAAGTGAATTTTAGCAATGGTTGTTCAAAATAACTTTGGATTATTTGGACAACACTTTGTAAAGTGTGGAGCTGTTTAACTCATTTAGTAAGCAATCATAAATTATAATTAGATCACTGTTACTACTATCACTTATTAAAAAGTTCCTCTGAAATATGCTCTATTCTTATCTCTTCCCTTTATGTTAATCAGAATGAAGCCATATTTGTTGGTATTATGCTAAGGAAATCAATTAGGCACTAATGTAATTAGATTTACTCTCATGATAAACTTGGGGAAAAACAATGCCCTTGTTTATAAGGGTGTGGATTGTGAGATCTCACATCGGTTGAAGAGGGGAACGAAGCATTCTTTATATAAGGGTGTGAAAAGCATTTTAAAACCTTGAGGGAAAGCCCGAAAGGGAAAGTTCAAAGAGGACAATATCTGCTAGCAGTGGGCTTCGACTGTTACAAATGGTATCAGAGCCAGACACCAAGCGGTATGCCAGCGAGGATGCTGGGCCTCGAAGGGGGTGGACAACGGACAGTGTGCCAACGAAGACGTTGGGTCTCGAAGGGGGTGGATTGTGAGATCCCACGTTGGTTGGAGAGGGAAACAAAACCTTTTTTTACAAGGGTGTGGAAACCTCTCCTTGTTAGATGCATTTTAAAAACCTTGAGGGGAAGCCTGAAATGGAAAACCCAAAGAGGACAATATCTGCTAGCGGTGGACTTGGGCTGTTATAACATAGCTGTTGTTTTCCACGAACTAAATGTTGTATAGGTTCCAGGTATTGTTTTTGCGAGAGGACCTGCTGTTGCTGTGCTTATCCTTTTGAGTTGCGAAGGAGAAACTTATGCTGTCCTCACTGAGCAGGTAGATGTTTATTTCGTTTTATATGTTATATTTCTTTGAAGTTTATGAGTTTTGTTGAGAATAAATCGTTAGCCATGTAATTGGATGCTAATAACTATCAGAGGTCACAATTTTTTGGTTGTTTATATTGTGAAACACTGCTTGAAAGTTGAATCTTGATCACACAGAGTTGAAATTTTATGTTTAAGGTTAGAGTTCCGGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAGGGGGATTTTGTTGGCACTGCAGTTCGTGAGGTCCAATCTCTCTCTCTCTCGCTCTCGATGTGATGCAACTTTATGTTTTTGTAATGTGGAAAAAAAAAAGAAAAAAAAAAAGGTTCCCTGAGTTTATGCTGATATACTAATATGTATGGTAATTTGATTCTCTTTTCTATAGGAAATCTTTGTATTTTCTATAGAAGGGTGAAGGGTTTCTTTGGCTTTTGATGCGTGCTTTGACGTGGTAATCATATGGCAGGTTGAAGAAGAAATTGGCATTCGATTAAAGCTTGAGGACATGGTCGATCTTACTGGCTTCTTGGACCCATCGACGGGATGCAGAGTCTTTCCTTCTCCCGTAAGTTCGTTTTCACTGATATCAATGGTTCAAAATTTGCCAGTCGTGAGTAGGCTAGTCTTTTCCTCCGTAACAGTCAAAGCCTACTGTTAGCAGATATTGTCCACTTTGGGCCGTTACATATTGCCGTCAGCCTCATAGTTTTACAATGCGTTTCATAGAGAGAGGTTTCCACACCATTATGAAGAATGTTTATTTCCCCTCTGCAACTGACATAGGATCTCGTGGATTTTTAATCTGCTGTTTTACTGCAATGTTTTATTTATTAAGAGCTACTGTCTTTTGGGAATATAAGGTAGGCTGGCAAGAAACTTCTTAATCTAAGTTAAGTTTCTTGCCAAACAGAGTTATATGAGGAACTATTATCAGCTTTTCCTCTCTTTCCCTCCCAGGCTTTCCTTCAAGGTTTTTAAAATGCGTCTATTAGGAATAGGTTTTCACACCCTTGAATGTTTCGTTCTCCTCCCATCGATGTGAGATCTCATAATCTACTTTTTTCAGGGCCTAGCGTCCTCGCTGTCACCCATTCCTCTCTCCAATGGATGTGGAATCTCACATCCTCACACCAGCCTATAACATTCGATTGGGTCTCACTCTCTCCGCAGACGATGATTACCCAAAAAGTTTCCTCTCTTCTAACTAATTCACTTGTGACTTGCCCGTTTTTGCAACTTCTTGTGTACACGTCGACTCTTGAATGCTCTAAAGAAATCATTACACAAAAAGATATCCAAATATCATCCTTAATTTTGTACATTGTGGGTTGTTTTGTGTATGAGCAATACTAAACATTATGTTACACGTTGGTGGCTAGGGTGGATGTGATGAGGGAATTGGTCTGTTCTTGTACCGAGGATCTGCAAGTAAAGAGACAATTGCAGAGCTGCAAGGAAAGGAGACCGGACTCAGGGATCATGGTGAGCTGATTAAGGTTCATGTTGTTCCCTATGAAAAACTGTGGCGAGTTACAGCAGATGCGAAGGCTCTAATGGCCATTGGACTCTATGAAATGGCTAAGAAGGAAGGGCTTTTGCCTTCTTTGAAACAATGCTAGCGTCTTCTCTTCACCTTGAACCTTAGACACATGTTTTCCTTCTTCAATTCAACTTTTTCTGCTTAATGTAAAAGGTTAACTAGTTCCTTAAGGAAGACAATTGTGCTTCATGAAGTTGGACTCATTATTAGAAATGTCCATGTCTATGGGGCGGGGACGGAGATGAGGAACAGTTCCCCGTTCTGTACCTCATCCCCGCCTGCTATTTCATTCTCCTTTTGTGTGAAATTCTCCGTTTATTTTTTTGGAGATAGGGTTGGGAATTCCAGCTCTTCCCGAAATTGGACTTTGGTAATTTTTTTTCCATTTATCATCCTTTTAAAAAAATAGTTATTTTAAAG

mRNA sequence

GTTCCTTCAGATTTAGATCCTTCTCTTGCCGAATGTCGGCCGATTCTGCAAATCGAAGCCAATCCATCACCTTGCCCTGCCAACACGAGCAACCTGTGCAGATTCTCGCTGCACCCGGTCTCTCCGATTCCGATTTACGGCAAGAATGCTGTGGATTCATCGTTGTTCAAACAATGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCCCAGGGAGCCATGTCTCTGAAGCGCGTTCTTATTCAGGGAGTTGATATGTTCGGAAGCAGAATTGGGTTTCTCAAATTTCAAGCCGATATCTACGATAAGCAAACCGGGAAGAAGGTTAGAGTTCCGGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAGGGGGATTTTGTTGGCACTGCAGTTCGTGAGGTTGAAGAAGAAATTGGCATTCGATTAAAGCTTGAGGACATGGTCGATCTTACTGGCTTCTTGGACCCATCGACGGGATGCAGAGTCTTTCCTTCTCCCGGTGGATGTGATGAGGGAATTGGTCTGTTCTTGTACCGAGGATCTGCAAGTAAAGAGACAATTGCAGAGCTGCAAGGAAAGGAGACCGGACTCAGGGATCATGGTGAGCTGATTAAGGTTCATGTTGTTCCCTATGAAAAACTGTGGCGAGTTACAGCAGATGCGAAGGCTCTAATGGCCATTGGACTCTATGAAATGGCTAAGAAGGAAGGGCTTTTGCCTTCTTTGAAACAATGCTAGCGTCTTCTCTTCACCTTGAACCTTAGACACATGTTTTCCTTCTTCAATTCAACTTTTTCTGCTTAATGTAAAAGGTTAACTAGTTCCTTAAGGAAGACAATTGTGCTTCATGAAGTTGGACTCATTATTAGAAATGTCCATGTCTATGGGGCGGGGACGGAGATGAGGAACAGTTCCCCGTTCTGTACCTCATCCCCGCCTGCTATTTCATTCTCCTTTTGTGTGAAATTCTCCGTTTATTTTTTTGGAGATAGGGTTGGGAATTCCAGCTCTTCCCGAAATTGGACTTTGGTAATTTTTTTTCCATTTATCATCCTTTTAAAAAAATAGTTATTTTAAAG

Coding sequence (CDS)

GTTCCTTCAGATTTAGATCCTTCTCTTGCCGAATGTCGGCCGATTCTGCAAATCGAAGCCAATCCATCACCTTGCCCTGCCAACACGAGCAACCTGTGCAGATTCTCGCTGCACCCGGTCTCTCCGATTCCGATTTACGGCAAGAATGCTGTGGATTCATCGTTGTTCAAACAATGGCTGATGAACTTGCAAGGTGAGAGTGGGATTTTAGCCCAGGGAGCCATGTCTCTGAAGCGCGTTCTTATTCAGGGAGTTGATATGTTCGGAAGCAGAATTGGGTTTCTCAAATTTCAAGCCGATATCTACGATAAGCAAACCGGGAAGAAGGTTAGAGTTCCGGTTGGGAAGCTCATGTTGGAATTGCCTGCTGGTATGTTGGATGATGATAAGGGGGATTTTGTTGGCACTGCAGTTCGTGAGGTTGAAGAAGAAATTGGCATTCGATTAAAGCTTGAGGACATGGTCGATCTTACTGGCTTCTTGGACCCATCGACGGGATGCAGAGTCTTTCCTTCTCCCGGTGGATGTGATGAGGGAATTGGTCTGTTCTTGTACCGAGGATCTGCAAGTAAAGAGACAATTGCAGAGCTGCAAGGAAAGGAGACCGGACTCAGGGATCATGGTGAGCTGATTAAGGTTCATGTTGTTCCCTATGAAAAACTGTGGCGAGTTACAGCAGATGCGAAGGCTCTAATGGCCATTGGACTCTATGAAATGGCTAAGAAGGAAGGGCTTTTGCCTTCTTTGAAACAATGCTAG

Protein sequence

VPSDLDPSLAECRPILQIEANPSPCPANTSNLCRFSLHPVSPIPIYGKNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTGKKVRVPVGKLMLELPAGMLDDDKGDFVGTAVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAELQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC

Homology

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy Swiss-Prot
Match: Q9SZ63 (Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT14 PE=1 SV=2)

HSP 1 Score: 311.6 bits (797), Expect = 8.1e-84
Identity = 153/232 (65.95%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           ++A+DSSLF+ WL NL+ ESGILA G+M+LK+VLIQGVDMFG RIGFLKF+ADI+DK+TG
Sbjct: 71  RDAIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFLKFKADIFDKETG 130

Query: 108 KK-------------------------------VRVPVGKLMLELPAGMLDDDKGDFVGT 167
           +K                               VRVP GK++LELPAGMLDDDKGDFVGT
Sbjct: 131 QKVPGIVFARGPAVAVLILLESDGETYAVLTEQVRVPTGKIVLELPAGMLDDDKGDFVGT 190

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGI+LK EDMVDLT FLDPSTG R+FPSPGGCDE + +FLYRG   KETI +
Sbjct: 191 AVREVEEEIGIKLKKEDMVDLTAFLDPSTGYRIFPSPGGCDEEMSVFLYRGQVEKETIRQ 250

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPS 249
           LQGKETGLR+HGE IKV ++PY +LWR TADAK LM+IGLYEMA++EGL+ S
Sbjct: 251 LQGKETGLREHGEFIKVRLIPYRELWRKTADAKVLMSIGLYEMAQREGLVSS 302

[Close]

BLAST of Cp4.1LG13g02030 vs. NCBI nr
Match: KAG6579460.1 (Nudix hydrolase 14, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 4.20e-135
Identity = 203/236 (86.02%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRV+IQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 36  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVVIQGVDMFGSRIGFLKFQADIYDKQTG 95

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 96  KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 155

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 156 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 215

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC
Sbjct: 216 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 271

[Close]

BLAST of Cp4.1LG13g02030 vs. NCBI nr
Match: XP_022969883.1 (nudix hydrolase 14, chloroplastic [Cucurbita maxima])

HSP 1 Score: 392 bits (1008), Expect = 5.99e-135
Identity = 204/236 (86.44%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 76  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. NCBI nr
Match: XP_023549705.1 (nudix hydrolase 14, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 392 bits (1008), Expect = 5.99e-135
Identity = 204/236 (86.44%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 76  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. NCBI nr
Match: XP_022922115.1 (nudix hydrolase 14, chloroplastic [Cucurbita moschata])

HSP 1 Score: 389 bits (998), Expect = 1.99e-133
Identity = 201/236 (85.17%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 76  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMV+LTGFLDPSTGCR+FPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIRLKLEDMVNLTGFLDPSTGCRIFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMA GLYEMAKKEGLLPSLKQC
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAFGLYEMAKKEGLLPSLKQC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. NCBI nr
Match: XP_038876088.1 (nudix hydrolase 14, chloroplastic [Benincasa hispida])

HSP 1 Score: 369 bits (948), Expect = 8.01e-126
Identity = 191/236 (80.93%), Postives = 199/236 (84.32%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NA+DSSLFKQWLMNLQ ESGILA+GAMSLK VLIQGVDMFG++IGFLKF+ADIYDKQTG
Sbjct: 76  RNAIDSSLFKQWLMNLQSESGILAKGAMSLKSVLIQGVDMFGNKIGFLKFKADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGI+LKLEDMVDLTGFLDP+TGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIQLKLEDMVDLTGFLDPATGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPY KLWRVTADAKALMAI LYEMA KEGLLPSLK C
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYGKLWRVTADAKALMAIALYEMALKEGLLPSLKPC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL
Match: A0A6J1I286 (nudix hydrolase 14, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468947 PE=4 SV=1)

HSP 1 Score: 392 bits (1008), Expect = 2.90e-135
Identity = 204/236 (86.44%), Postives = 205/236 (86.86%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 76  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL
Match: A0A6J1E7S8 (nudix hydrolase 14, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430183 PE=4 SV=1)

HSP 1 Score: 389 bits (998), Expect = 9.64e-134
Identity = 201/236 (85.17%), Postives = 204/236 (86.44%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG
Sbjct: 76  RNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGIRLKLEDMV+LTGFLDPSTGCR+FPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIRLKLEDMVNLTGFLDPSTGCRIFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLKQC 252
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMA GLYEMAKKEGLLPSLKQC
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAFGLYEMAKKEGLLPSLKQC 311

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL
Match: A0A1S3ATD5 (nudix hydrolase 14, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482685 PE=4 SV=1)

HSP 1 Score: 367 bits (943), Expect = 2.16e-125
Identity = 189/234 (80.77%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NA+DSSLFKQWLMNLQ ESGIL +GAMSLKRVLIQGVDMFG++IGFLKF+AD+YDKQTG
Sbjct: 76  RNAIDSSLFKQWLMNLQSESGILTKGAMSLKRVLIQGVDMFGNKIGFLKFKADVYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGI+L+LEDMVDLTGFLD STGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIQLRLEDMVDLTGFLDQSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLK 250
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAI LYEMA+KEGLLPSLK
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIALYEMAQKEGLLPSLK 309

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL
Match: A0A5A7TN73 (Nudix hydrolase 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003260 PE=4 SV=1)

HSP 1 Score: 364 bits (934), Expect = 5.04e-124
Identity = 188/234 (80.34%), Postives = 198/234 (84.62%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           +NA+DSSLFKQWLMNLQ ESGIL +GAMSLKRVLIQGVDMFG++IGFLKF+AD+YDKQTG
Sbjct: 76  RNAIDSSLFKQWLMNLQSESGILTKGAMSLKRVLIQGVDMFGNKIGFLKFKADVYDKQTG 135

Query: 108 KKV-------------------------------RVPVGKLMLELPAGMLDDDKGDFVGT 167
           KKV                               RVPVGKLMLELPAGMLDDDKGDFVGT
Sbjct: 136 KKVPGIVFARGPAVAVLILLSCEGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGT 195

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGI+L+LEDMVDLTGFLD STGCRVFPSPGGCDEGIGLFLYRGSASKETIAE
Sbjct: 196 AVREVEEEIGIQLRLEDMVDLTGFLDQSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 255

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPSLK 250
           LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAI L EMA+KEGLLPSLK
Sbjct: 256 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIALNEMAQKEGLLPSLK 309

[Close]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL
Match: A0A6J1BP72 (nudix hydrolase 14, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004513 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 7.68e-123
Identity = 193/274 (70.44%), Postives = 210/274 (76.64%), Query Frame = 0


Query: 13  RPILQIEANPSPCPANTSNLCRFSLHPVSPIPIYG------KNAVDSSLFKQWLMNLQGE 72
           RP     +  SP P+ +  L      PV  +   G      +NA+DSSLFKQWLMNLQGE
Sbjct: 37  RPFSSKMSADSPAPSQSITLPCQIQQPVQIVAAPGVSDSDFRNAIDSSLFKQWLMNLQGE 96

Query: 73  SGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTGKKV---------------- 132
           SGILA+G MSLKRVLIQGVDMFGS+IGFLKF+ADIYDK++GKKV                
Sbjct: 97  SGILAKGTMSLKRVLIQGVDMFGSKIGFLKFKADIYDKESGKKVPGIVFARGPAVAVLIL 156

Query: 133 ---------------RVPVGKLMLELPAGMLDDDKGDFVGTAVREVEEEIGIRLKLEDMV 192
                          RVPVGKLMLELPAGMLDDDKGDFVGTAVREVEEEIGI+LKLEDMV
Sbjct: 157 LDCGGETYAVLTEQVRVPVGKLMLELPAGMLDDDKGDFVGTAVREVEEEIGIKLKLEDMV 216

Query: 193 DLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAELQGKETGLRDHGELIKVHV 249
           DLT FLDPSTGCRVFPSPGGCDEGIGLF YRGSASKETI+ELQG+ETGLR+HGELIKVHV
Sbjct: 217 DLTSFLDPSTGCRVFPSPGGCDEGIGLFFYRGSASKETISELQGRETGLREHGELIKVHV 276

[Close]

BLAST of Cp4.1LG13g02030 vs. TAIR 10
Match: AT4G11980.1 (nudix hydrolase homolog 14 )

HSP 1 Score: 311.6 bits (797), Expect = 5.7e-85
Identity = 153/232 (65.95%), Postives = 180/232 (77.59%), Query Frame = 0


Query: 48  KNAVDSSLFKQWLMNLQGESGILAQGAMSLKRVLIQGVDMFGSRIGFLKFQADIYDKQTG 107
           ++A+DSSLF+ WL NL+ ESGILA G+M+LK+VLIQGVDMFG RIGFLKF+ADI+DK+TG
Sbjct: 71  RDAIDSSLFRNWLRNLESESGILADGSMTLKQVLIQGVDMFGKRIGFLKFKADIFDKETG 130

Query: 108 KK-------------------------------VRVPVGKLMLELPAGMLDDDKGDFVGT 167
           +K                               VRVP GK++LELPAGMLDDDKGDFVGT
Sbjct: 131 QKVPGIVFARGPAVAVLILLESDGETYAVLTEQVRVPTGKIVLELPAGMLDDDKGDFVGT 190

Query: 168 AVREVEEEIGIRLKLEDMVDLTGFLDPSTGCRVFPSPGGCDEGIGLFLYRGSASKETIAE 227
           AVREVEEEIGI+LK EDMVDLT FLDPSTG R+FPSPGGCDE + +FLYRG   KETI +
Sbjct: 191 AVREVEEEIGIKLKKEDMVDLTAFLDPSTGYRIFPSPGGCDEEMSVFLYRGQVEKETIRQ 250

Query: 228 LQGKETGLRDHGELIKVHVVPYEKLWRVTADAKALMAIGLYEMAKKEGLLPS 249
           LQGKETGLR+HGE IKV ++PY +LWR TADAK LM+IGLYEMA++EGL+ S
Sbjct: 251 LQGKETGLREHGEFIKVRLIPYRELWRKTADAKVLMSIGLYEMAQREGLVSS 302

The following BLAST results are available for this feature:

BLAST of Cp4.1LG13g02030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZ63	8.1e-84	65.95	Nudix hydrolase 14, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT14 PE=1...	[more]

BLAST of Cp4.1LG13g02030 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6579460.1	4.20e-135	86.02	Nudix hydrolase 14, chloroplastic, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022969883.1	5.99e-135	86.44	nudix hydrolase 14, chloroplastic [Cucurbita maxima]	[more]
XP_023549705.1	5.99e-135	86.44	nudix hydrolase 14, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022922115.1	1.99e-133	85.17	nudix hydrolase 14, chloroplastic [Cucurbita moschata]	[more]
XP_038876088.1	8.01e-126	80.93	nudix hydrolase 14, chloroplastic [Benincasa hispida]	[more]

BLAST of Cp4.1LG13g02030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I286	2.90e-135	86.44	nudix hydrolase 14, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111468947 PE...	[more]
A0A6J1E7S8	9.64e-134	85.17	nudix hydrolase 14, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111430183 ...	[more]
A0A1S3ATD5	2.16e-125	80.77	nudix hydrolase 14, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482685 PE=4 S...	[more]
A0A5A7TN73	5.04e-124	80.34	Nudix hydrolase 14 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00...	[more]
A0A6J1BP72	7.68e-123	70.44	nudix hydrolase 14, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004513...	[more]

BLAST of Cp4.1LG13g02030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11980.1	5.7e-85	65.95	nudix hydrolase homolog 14	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 119..223 e-value: 2.3E-9 score: 37.4
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 61..238 score: 11.387361
None	No IPR available	GENE3D	3.90.79.10	Nucleoside Triphosphate Pyrophosphohydrolase	coord: 106..242 e-value: 4.8E-24 score: 86.7
None	No IPR available	PANTHER	PTHR11839:SF18	NUDIX HYDROLASE 14, CHLOROPLASTIC	coord: 109..248
None	No IPR available	PANTHER	PTHR11839	UDP/ADP-SUGAR PYROPHOSPHATASE	coord: 109..248 coord: 46..110
None	No IPR available	PANTHER	PTHR11839:SF18	NUDIX HYDROLASE 14, CHLOROPLASTIC	coord: 46..110
None	No IPR available	CDD	cd03424	ADPRase_NUDT5	coord: 111..239 e-value: 1.74025E-23 score: 90.2417
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	55811	Nudix	coord: 108..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG13g02030.1	Cp4.1LG13g02030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006753	nucleoside phosphate metabolic process
biological_process	GO:0019693	ribose phosphate metabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0080042	ADP-glucose pyrophosphohydrolase activity
molecular_function	GO:0080041	ADP-ribose pyrophosphohydrolase activity