Cp4.1LG12g10030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g10030
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	coiled-coil domain-containing protein SCD2-like
Location	Cp4.1LG12: 9735246 .. 9744592 (-)
RNA-Seq Expression	Cp4.1LG12g10030
Synteny	Cp4.1LG12g10030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTATCGTTTAAGTCCCTCTAGTCTACGTACTTTTTTTTTTTTTTTCTTTTTTTCTTAATACAGAAAATAAGAAAATCTGCGGCGGCTGTTTTCTTCCCCTTTTCAATGTTAGTTGCAGCGTCCATAAACTGCGTTGGCTCTGTTTCTCTCGCGATTCTTCCCTCCAAATTCCCTCACTTCCCAGAACTTGGAACTCTTCTTACCATTTCTTACTAAATCTTTGTGCTTCTCCGATCTCTTTCACCAAGCTGCTGCTACTGTAGATGGATGTGAAACGGACTGAGAGCCCGATTTATGCTCGCCAATGGAGCAGCGAATCAGGCAGCACAGGTGGTCCCGCGTCACCGGCCATGTCGCCGGCGCGCGGCCATCACGCTCGATCCTCCTCCGTTTCTGGAATTTCCAACATTAAGCGCACACAGAACTTCGCTGCAAAAGCTGCGGCTCAGCGGCTAGCTCAGGTTATGGCTTCTCAGACCGCCGTTGACGACGAAGACGATCAGGACGATTTAGGATTTCGTTATAGTGCTCCTCCTCCTATTTCGTTGTCTAGGAATGTTAATAACGGTGGTAGACTTGCTGTTCCTACTGCGAAAACCACTAGATCTCCCTCCCCTGGGGTAAGTTAAATGCCTTGTGCTCTAGTCTGATTGATTTCTATTGTAACTGAAGCGGACTACTTCTGTTTTCTGCTTCTTTGCACATTGTCTTCTGCTCTCTGCTCCCGGCTCAATTTTTCTTCAAGTAGGTCTGCTCGGTGTAAATGTTGGTTAATATCTGTTCTGAGTAACTTGATTTGGAATTCTTTACAAAAAAGATATATAGATTCACGGATCCTTCCTTTCACGAATTGAATGCCATTTTTCGTTAAATTAGCAGGTCTTCCTAATAAATGTTCCTCCGGTGCTTTACACTCCATTTGTTCTAGAAAGGCGATAGCCAGTTATCTTTTCCGGAATGAGAACACCGCTGAGCTGATTTCTGACGACTAATCGAATTTCTCTTTTGCGACTTCTAATTAGTTAGCCAGAAATTTTTTAGAAGACATTCCTTCAGTTCGTTCCACTTCAGCAGGAAGATCGTCAATATCTCACCTTTCACTGCCAGTGGCTCCACCCAAAACAACACTGAGGACGGCAACTTCAATGCCACCCCTAGATCCGCCTACTCAAAGAGGAAAAAGGTAAATCATTTTGACTACGACGTAGATTAGAAAATCAAATTGGTGGTTCGGACTGTATGAACACAATGCAAGTTACTTATCTGGTTTTGACATCTATACTTTTTTCTGTTTTTTATAGTTTTTCTCTTTGTTTGGAATTGAAACAAAGCCTAAACAAGTTTAATAATGAATTGGTGGTGGTTGGGAGGTGAAATAAGTTTGTTCTTGCTACCTTTTGTTTTGGCGGTAAAATTGCCCACTGGCCCCAACAAAAATGTAAAAAATAGATAAAAAGAAAAGAAATTGAACTTTAAGATTCCTTTAGTTTCCTCAATATCTAGGAAAAGAAATATTATTTCTTGCTGGGAGATGCTTGAAAATCTCCTTCATAGTTACCTGAGTTGTTGACTAATTTGATTATCCTGCTCAAGTCAATGATTTGTTATTCTGGGTAATGATTAAGTTAAGAGTACTGTTAGAAACTTAAAAATCTTGTTTGCCCCTTACATTGATAGCTGCTACATCTCTGGACATGTAGCCTATATTTTCCATACGTTGCTTTTTCCTGGTATCTGCTGATGAGAGTGGGATAGTTCTGAGGATAACTACTATGGTATAGTATATCAAAAAATTGGTGATTGATAAATGTAATACTGCAGATTCTCATCAGATACAGTGCGTTTTAATACTAAAGATTCAGGAGATCAGCGAGAAGCATCTGGCCTTCGTGATGAAGTATGTCCATAGCATTATTGTTTCATATCTGAATGGTTTGATTGACTGTGTGACTGTAAACCAGCATGTCCGTGACAATGCTCCTTTTCCAGTCTTCGAGTACTTAAAGGTTTTCAATTCTCTGTGCTGTAGCTTGATATTCTACAAGAGGAGAACGAGAACATTCTTGTGAAGGTGCTTTGATTTTTCATTTTTTTCTTTCTTTTTCACTGGTTTTGAGCATTTTATTAAATATCCTTTGTGCTTAAATTTTGTACTTGGGTATTGTTTACAGCTCAGGCTTGAGGAAGAGAGATGTAAAGAAGCAGAAACAAGAGTTAGGGAACTTGAGAAGCAGGTAATGGATACATCATTTCAATATAATGTTCATTACTTGTGCTTGTCTTTTTCTTTGCCATGGAAAATCTTTTCTCAGAAGCAATTTGGACGTGTAATGTGCTTCAGATTTGTATAACAGCATCAAGTGTAGCCACCCACCCGTGAAGAAAGAAAATGAATGAGAAATTAAGCGTAGCCACCTAGAAAGGACAGGAAGTGAGAAAATTTTGATATTTTGTCATGTGGTGAGAAACTAAAAGGAGTAAACAGATCTGAGGACAAATAAAAAGCTTAAGAGGAATGTTGGTTGTGTAAGAAAATGAGTAAAGAAAGCATTGTGTAAAAATGCGCACAGCTCTTCTAGAAATGCCCGGCCTGATAGGAGAAGTGATAATATGGTTCGTTTTAGGATGGTACTGGCCATGGAACCAATAAGAGAACACGTAAGATTAGGTAGTAAACTGAAATGAAAGAGAAAAGGAAAAAGAACAATGTACTACATTGATGTTCAACAAAGTGTGAGCTTGAGTGAGGTTCCTTCACCAGGTTAAACATCAAAGTCAGCCTGTGACCAATAGAGCCCAAGCGTAGGTCTTCGAAATGGAAGTCTTTGTATTCTGGATTATTTACTTTTGTCTTTACTGTTTGTTTTGGTGTTCCAATTTTCGGCTGGAACTTTAGTTTCACTTTTGTACTACGGTGACAAAATACATGTGACTGATGTGTTTCTAAGTTATCAGGTTGCTTCTCTGGGAGAAGGTGTTTCTTTAGAAGCCAAACTTTTGAGCAGGTCAATGCAAGTTTAAGTTAATTTCATTGGATTGTTTTCCTTCTTGATGTCTGTATAATATGTTGTCTGTGCTATTAATAATGCAGGAAGGAAGCTGCATTACGTCAGAGAGAGGTATTTACAGCACCAGATGTGTAAGACTTATGATCGAGAACATAGGGAAGCTTAGTTATAACCATTGAAATATTTAATGTACTCAGGTTGCTAAGTTGTGAGATTTTTCAAAGTTACCTAGGTAGAATTTTAAAGATCAAATGGCTTATTTAGATATTGCTTGCAGAATGATGGAAGTTATTGTCTATATTTGATCATTTGTTCCTACACATGAAGCAGCAAAGAAAAAGGCATTATTTCTGATTGTACTTTCAATTTCACAGGCTGCACTTAAAGAAGCAAAACAATCGAAGGATGGGGGGGACAAGGAAATTGAATCCCTTAAATCTGAAGTTAAGGTTATATTCCTTGCTTCCTTTTACGTCCAAAAAATTAAACATGGTTATCCTTTACTGATTTAAAATAGTGCTATTTCTTATTTCTTACTTGAATTAGAAAGCAAAAGAAGAGACTATAAGTGTTGTTCAACACCTTCATGGAGTTGAACATGATGTGAAAGCCCTTCGATCTATGACGCAAAGAATGATTTTGACTCCGAAGGAGATGGTCCGTACTTGCTTTAATTAAAGTAGCTTGTCATGTTAGTTTGCATTTAGAGATGAATTATTCAACATTTTTTATTTCAGGAAGAAGTCGTTCTAAAAAGGTGTTGGCTTGCTCGCTACTGGGGACTGGCTGCAAAATATGGTAAATCAGATGACATGCCTCTTTCATTTATTACTTTGAATTCTACATAGTTCTTTTTCAAATGCTGAAGTCCTTAGTTGAATCTAACTGAAATACTATGTTTCTTGCTTTTTTGCATTATATCACCCCATTGTCGGAAATGTAAAATATCATGAAAGATTTTAATATTTCGAAAATTTTACTTAGACCTCTATCAAGTTATGAACTATTGCAGAACCTCGGCCTCCCTGTATGTGTGAAACTTTTTACTTGTCCTTTCATTTTGATGTCTAGCAGGTGGCTAATAGCTTCTTGCAGTTCATTAATCTTGATATATCTATTTTCGTGGTTTTCAGGCATTTGTTTGGATATTGCTGTGACTAAGTACGAACACTGGTCATCTTTAGCACCACTGCCATTTGAGATTGTTATTTCTGCGGGACAAAAGGCTAAGGAAGAATTTTCTCAAAAAGGCTAGTTCCTGTTCGGTGCTTGTACTTTATTTATTGATCTTCCTGCCACTGCCCACCAACAAAAATGGGCCCTTTTTTTTTGTGGTTGCATTATCTAAGTCAATATGATTTTATCCCATCCCATAATGCCATTTACATTTACCAGGAGACCTGGATCCTGAGAAAAGGAGCCACTTTGTTCTTGATATAAGTGATCTAACCGGAGAAGGAAATATTGAAAGCATGCTATCTGTTGAAATGGGATTGAAAGAACTTGCTTCTTTGAAGGTTTCTTTATGATACGTTACTCTCTCTCTCTTCTTTTTTTGGGTTGGGGTGATGGAGGGGGGGATGTTGGGAACTTTAATCATCAAGTATAAATTCTGTTGTGTTCCGTTTCTTTTCTTTTCTAAACTATGTTCTTTGTTGTCATCTTGTGATTGCTATTACTGTTTAAATTAAGTTTAAGCTTGATTTGGAAAACAAAGGTGGAGGAGGCTCTTGTGCTTGCTCTGGCTCAACAGAGGCGACCAAATTCTGCGCGACAGTCTCTCTCAGGTGTGAATTGTTAGTATGACATTCATTTTATTATACTCTAATTAGCTTATATTTAAATCCTAAATGATTATTTGTATGAACTAAAGGTTGCCAAAAAGAAATTTTTAGCCTCGTCCCTGCTTTGGACCTCATGTAATCATTAGATTGACATTGCTAAATTTGTCTAATTTGTCTTGTCTTGCTTGAGTACGCTTGCATCTTATCATCCCTCTATTTTTTTTCCCCATAAAGTTATTGCTTCTTATCTACTAAAAAAAAAAAACAGGCAAGACTGCGGGCTTTTTTTTGTTACTTGTTCTATTAATTCTCAATATAAATGAATGCCTCTTCTGGAACCCATCATTGCCTGCCAATTCTCATTACAGTTGATCATGAAGACCAATTATTGTCTTTGCTCAAGTGCTCATGGACTCTCAACTTTGCTCGAGGATCATTTTAGTGTCGTCAATTTCAATTTTCCACGTCACCTATCATTTATCAGTTCGTTCGGTGTGTGTCCATAATGCTATTGCAAATGCCATTCAATCAATTGAGCATTCCAGCCATAAATAATTTTAGCCTTTTGAAGATGTCTATTGATAGGTTATTTGATGAGAAACGCGACTAGTGTTATTATTGTTTTAGTGAAAGTTTTTTTTATCTTTGAATCTGTATGATAAAATAGAAAAGTTATGTTATAACCAATTCCTCCAAGGATGCATGAATTACCAACTTTAAAGTACCAATTCTAGCACTTGGTAGTATCCATTGCTGAACACTTTCCAAATCAATTTAATGTTGCAGATATCAAATCGCCAGTTGATCCGAAGTTCATGGAGGCATTTGGTATGTCATTTTTGTTGCCCATCACTTTTCGATAGTTATGAAGTTTGGAAGGGATAAAGCTTGCTAAAATTTCTCATTGAATTGCTCCTGCTTAATTCTCTGAATTTGATAACAATCAGGACTGCATTTCATTTCCATGGGATGCTAGTATACTCTAATACTTTTCGTTTTATGCTGTCTTCTTTAATTTTGATGCATGAAACAATAATTGAGCATGTACTGAAGCATTTTATATATTCTTCATCACTTTAATATTCGGTGAGTGTTTTATTTCAGAATTGAGCCCAGAGGAATCTGAAGATGTTCTTTTCAAAGAGGTCTTTCCATTTCCCCTAATTTGTTCTCTTTTTGTAACCTAATTTTCTGTTGCATGATATATAGGTGGTATTTTTTAATGATTAGTACATTGCTTTCCCTGTTAGAATTTTCTTTCTTAGCACACCAAAATACGAAAACGCCCTTCATACATCCATATGCTTCCTGGCCCTTAACGAGAACAACTCTCTTTGACCTTTGTCTGGTCATAGAACCTTTGTTCAGACGATGTCAGTTCTCTTTTACAGGTCTTATCTACTGGATGAGAGCCAACAAATCCCTCCATCAGCTGCAAATGTTATGACTTCCTTGTCACTAATGATTTAACTGTTAGGTTTTGTACTGACATTTCGTGTAGATGATGGTTAGAGTGAAATTTTTTGAGGTGCCATTAGAATTTCTTACATTTGATCAGGAAGATGAGGGAAATTATTTCACCATCTCTTCTTTTGAAGAAACAAACTTTCATGAAAAAAATAAAAGCCTCTCACCCTTGCCGTCAAGGGCTTGAATTTATGGGGCCAATGCTTTTAGTATTTGGCACTGCCTGGCTCTGATCAGAAACAATCAATGTTGTTGGTGGTTCTCTGGAATCCGAAACAGTAGCCTTGTTGTCTAGTTCCTCGAGACAGGTGGTGGTTCCAAAAAATCTTTGTTAAGCAGCCATCGTACAAGCTATCTATAGTAAAACCTTCTGGTGGTAAACGAGTGGAACTGTATGAACTTATGTCACATTTACGCTGTGGTACTAATACCTGTATAAAAATGTGTTCCATATTTTGCTCTTCAACTTCTGTATTGCATGCTTACGTCATAAACAATCTGATTATACATCTGAAATACTCTTGGTCTCCAGGCATGGCTTACATATTTTTGGAGAAGAGCCAAAGCTCATGGTATTGAAGAAGATATTGCGAATGAACGACTTCAGTTCTGGATTAGTCGCAGTGCTCACTCTCCTTCATCACATGATGCTGTTGATGGTAAGTTTTGCAAAACAAGTTGACTACTTGTATCGTATACTTATGCCTCCTTTCATTTTCTTACCTTCCTCTTCTTCTTTTATCCCCCTTGTGTGGGTGAACGCCAATTTTCAGTTGAGCAAGGCCTCACAGAGCTCAGGAAGTTGGGAATTGAGCGTAGAATGTGGGAAGCATCACGTAAAGAGAGTGCTTGAACTCAATTACATAACCTTAGATAATGTGTCGCTCTGATTTCAAGTTCTTGTTTCCAATGTCACAACGCTGGCTAAAAGTTCAGTGCCTTCATATCAGCCGTTTTTTTTTTTTGGGGGGGGGGGGGGCAAATCCTCTCATGTTCTATATATATGTTGGTTACCTTGTTTCTGCTAATATAATGTAAGTCTCATGCACTGAACTACTGATATGAAAGTCACTTTCTGCATTCTAGAGAGGTGGGGCGGAAGAATCACCTCCTGGTTCAAGTACACAATGTTCTTTACTATCCTGGAAAAAAAAATAGGGAATACAAAGAAATTGATAGGTCTAGCTGGGTTGGAAAGTCGGTGTTCTGGTGGTTATAAACATTTGTGAATTTTCCATTGAAGAAGAAATTGATAGGTCTATGCAGCACTTGGTGGTGATTTTACAAGTTTAAGAGTTTCTGCAGGAGAGTTTATATCGTTCATACTATCTCAGTGATCAAATTGTAGGTTCTACGTCGTATGCAGTACTCATAGAATCCAAAATCTGTTTGCCCTCTCTTACAAAGCCTGAATGGCTGCAAGCAGTCAGTACTGCAATAAAGCTATACAATACAGTTCTATTGCAAGCAGCATTCCATCGAGCAGTTTTCATATAAACCAAACATTGCGACGAAAACATAGAATACGTTCAAAATATGTCCGAAATCTCCTAGATAAAAACCTAATTGGGGAAAAAATTGAAGAACCACAGCTGAAAATGTGTTTTGTGCATGCGAAAATCTGTCAGAAAGTTTACCTTAAAACTGTGAAACACAGGAATTTTCCACTTCACTTTTGCCAACGTTAAATTACACCATGATACTCACTTGACTTTCTCTGTCTATTTAATTCTCAACTGAAGTGTTTCAATTTGTTTTTAAAATATTTAAGAGACTTTTAAAAAAAAATTGAAGTTTATAAACCTAAAAAATGTCGTATCTTTTTTAGCCTTAGCCATGGCTTATGCAGTCTGATACTCTTCACAGTCTGTATTCTCTAATTCTGAATTCCAAGGTATTTGGAGGACGACGAAGGATTTTAAGACGTATTTCTCAGCGTTTCGCCATCTCGTTAAAACACGATGTCAACAAAAATGCGTTAATCCTCGTGGATGAGACTTAGCAATAGAGCAAACTGATTGTGTGGCCTTCATGATTGTTAACTGATATGCCATTTTGACCTTCTGTCATTGAGTTAATTGTGGTTAATGTTGCAGGTGATGGATCTTGATGGTTCATCTTGAGAAGTATTAACAATCTTGGCACCTTCAGCGCTTCATTTGTAAGTGATTAATTGCTGTCTGTATATTCTTACTATTCACAATCAATCGAGTATTTCGATGTCCCAATCTTGAAACAGTTTGAGTGCTGTTTTGGGAAGATTATTGCCTTTCAGATGATCACAAAAAACTCAGATAGTTTTTTATGTTGTTGGAGAGTATCAAGTATTGCTCAGTATTGAAGAACTTCGTAGTCTACTAATCATTTACAAGCATAATAGGAAGTCAGTAAAGAGGGGAGGAAAAGAAAACAACTGGAAGCTCCTTTTCCCAACAAGTTTTTTCTAGTAAACTCCCTTTTGATACTCTGGATCACAGAATTCACCACCCAGATCATCACAAGCCTCCGCAGGAAAGACTCTGCAGCAATCATTAAAAACCAAGATTATCAATGCATATTCAAGCATGAAACAGTGTTGTTTCATAGGAAATGAGAGATCTTACGTCTTAGGACTGTCATATTGTAGATACTCTCTATCAACTGCCTCTGAGACACTGCCTCCCTTTTTAGCCTCTGGTTTTAGCTTTACTTCAGGATACATTTCGACATCACAAGCTTCACCTCCAACAGTTTCACAAGCCTCTGCTGGAAAAACACTTCCAAAAACCAACACAGAAGGGCAAATGAAGGTATTGAATTTGATATATTGTTGTGTAACAATGAGAACTAAAATGATTTAGCTTACGAGGACACGGAGCTGTAGTCAACCGTTGAAGGGTCTTGTCCAACCGCACTTGCCTTCGCTTTTAGGATGGGGCGATGAGTTTGTGAAGTGGGGTGCCTTCGCTTGGACCTAGATGGGATTGAGAACGCCATCAATTTGGTAGTTGGTGGGAGAAGGTAGCATGAGGATGGATGTGCCAGGGAAGGAGCTGCCTGCAACTGCATGATGAACAATGGCTGTCTGCTGCGAACTTGATGCCTGG

mRNA sequence

ATCTATCGTTTAAGTCCCTCTAGTCTACGTACTTTTTTTTTTTTTTTCTTTTTTTCTTAATACAGAAAATAAGAAAATCTGCGGCGGCTGTTTTCTTCCCCTTTTCAATGTTAGTTGCAGCGTCCATAAACTGCGTTGGCTCTGTTTCTCTCGCGATTCTTCCCTCCAAATTCCCTCACTTCCCAGAACTTGGAACTCTTCTTACCATTTCTTACTAAATCTTTGTGCTTCTCCGATCTCTTTCACCAAGCTGCTGCTACTGTAGATGGATGTGAAACGGACTGAGAGCCCGATTTATGCTCGCCAATGGAGCAGCGAATCAGGCAGCACAGGTGGTCCCGCGTCACCGGCCATGTCGCCGGCGCGCGGCCATCACGCTCGATCCTCCTCCGTTTCTGGAATTTCCAACATTAAGCGCACACAGAACTTCGCTGCAAAAGCTGCGGCTCAGCGGCTAGCTCAGGTTATGGCTTCTCAGACCGCCGTTGACGACGAAGACGATCAGGACGATTTAGGATTTCGTTATAGTGCTCCTCCTCCTATTTCGTTGTCTAGGAATGTTAATAACGGTGGTAGACTTGCTGTTCCTACTGCGAAAACCACTAGATCTCCCTCCCCTGGGTTAGCCAGAAATTTTTTAGAAGACATTCCTTCAGTTCGTTCCACTTCAGCAGGAAGATCGTCAATATCTCACCTTTCACTGCCAGTGGCTCCACCCAAAACAACACTGAGGACGGCAACTTCAATGCCACCCCTAGATCCGCCTACTCAAAGAGGAAAAAGATTCTCATCAGATACAGTGCGTTTTAATACTAAAGATTCAGGAGATCAGCGAGAAGCATCTGGCCTTCGTGATGAACTTGATATTCTACAAGAGGAGAACGAGAACATTCTTGTGAAGCTCAGGCTTGAGGAAGAGAGATGTAAAGAAGCAGAAACAAGAGTTAGGGAACTTGAGAAGCAGGTTGCTTCTCTGGGAGAAGGTGTTTCTTTAGAAGCCAAACTTTTGAGCAGGAAGGAAGCTGCATTACGTCAGAGAGAGGCTGCACTTAAAGAAGCAAAACAATCGAAGGATGGGGGGGACAAGGAAATTGAATCCCTTAAATCTGAAGTTAAGAAAGCAAAAGAAGAGACTATAAGTGTTGTTCAACACCTTCATGGAGTTGAACATGATGTGAAAGCCCTTCGATCTATGACGCAAAGAATGATTTTGACTCCGAAGGAGATGGAAGAAGTCGTTCTAAAAAGGTGTTGGCTTGCTCGCTACTGGGGACTGGCTGCAAAATATGGCATTTGTTTGGATATTGCTGTGACTAAGTACGAACACTGGTCATCTTTAGCACCACTGCCATTTGAGATTGTTATTTCTGCGGGACAAAAGGCTAAGGAAGAATTTTCTCAAAAAGGAGACCTGGATCCTGAGAAAAGGAGCCACTTTGTTCTTGATATAAGTGATCTAACCGGAGAAGGAAATATTGAAAGCATGCTATCTGTTGAAATGGGATTGAAAGAACTTGCTTCTTTGAAGGTGGAGGAGGCTCTTGTGCTTGCTCTGGCTCAACAGAGGCGACCAAATTCTGCGCGACAGTCTCTCTCAGATATCAAATCGCCAGTTGATCCGAAGTTCATGGAGGCATTTGAATTGAGCCCAGAGGAATCTGAAGATGTTCTTTTCAAAGAGGCATGGCTTACATATTTTTGGAGAAGAGCCAAAGCTCATGGTATTGAAGAAGATATTGCGAATGAACGACTTCAGTTCTGGATTAGTCGCAGTGCTCACTCTCCTTCATCACATGATGCTGTTGATGTTGAGCAAGGCCTCACAGAGCTCAGGAAGTTGGGAATTGAGCGTAGAATGTGGGAAGCATCACGTAAAGAGAGTGCTTGAACTCAATTACATAACCTTAGATAATGTGTCGCTCTGATTTCAAGTTCTTGTTTCCAATGTCACAACGCTGGCTAAAAGTTCAGTGCCTTCATATCAGCCGTTTTTTTTTTTTGGGGGGGGGGGGGGCAAATCCTCTCATGTTCTATATATATGTTGGTTACCTTGTTTCTGCTAATATAATGTAAGTCTCATGCACTGAACTACTGATATGAAAGTCACTTTCTGCATTCTAGAGAGGTGGGGCGGAAGAATCACCTCCTGGTTCAAGTACACAATGTTCTTTACTATCCTGGAAAAAAAAATAGGGAATACAAAGAAATTGATAGGTCTAGCTGGGTTGGAAAGTCGGTGTTCTGGTGGTTATAAACATTTGTGAATTTTCCATTGAAGAAGAAATTGATAGGTCTATGCAGCACTTGGTGGTGATTTTACAAGTTTAAGAGTTTCTGCAGGAGAGTTTATATCGTTCATACTATCTCAGTGATCAAATTGTAGGTTCTACGTCGTATGCAGTACTCATAGAATCCAAAATCTGTTTGCCCTCTCTTACAAAGCCTGAATGGCTGCAAGCAGTCAGTACTGCAATAAAGCTATACAATACAGTTCTATTGCAAGCAGCATTCCATCGAGCAGTTTTCATATAAACCAAACATTGCGACGAAAACATAGAATACGTTCAAAATATGTCCGAAATCTCCTAGATAAAAACCTAATTGGGGAAAAAATTGAAGAACCACAGCTGAAAATGTGTTTTGTGCATGCGAAAATCTGTCAGAAAGTTTACCTTAAAACTGTGAAACACAGGAATTTTCCACTTCACTTTTGCCAACGTTAAATTACACCATGATACTCACTTGACTTTCTCTGTCTATTTAATTCTCAACTGAAGTGTTTCAATTTGTTTTTAAAATATTTAAGAGACTTTTAAAAAAAAATTGAAGTTTATAAACCTAAAAAATGTCGTATCTTTTTTAGCCTTAGCCATGGCTTATGCAGTCTGATACTCTTCACAGTCTGTATTCTCTAATTCTGAATTCCAAGGTATTTGGAGGACGACGAAGGATTTTAAGACGTATTTCTCAGCGTTTCGCCATCTCGTTAAAACACGATGTCAACAAAAATGCGTTAATCCTCGTGGATGAGACTTAGCAATAGAGCAAACTGATTGTGTGGCCTTCATGATTGTTAACTGATATGCCATTTTGACCTTCTGTCATTGAGTTAATTGTGGTTAATGTTGCAGGTGATGGATCTTGATGGTTCATCTTGAGAAGTATTAACAATCTTGGCACCTTCAGCGCTTCATTTGTAAGTGATTAATTGCTGTCTGTATATTCTTACTATTCACAATCAATCGAGTATTTCGATGTCCCAATCTTGAAACAGTTTGAGTGCTGTTTTGGGAAGATTATTGCCTTTCAGATGATCACAAAAAACTCAGATAGTTTTTTATGTTGTTGGAGAGTATCAAGTATTGCTCAGTATTGAAGAACTTCGTAGTCTACTAATCATTTACAAGCATAATAGGAAGTCAGTAAAGAGGGGAGGAAAAGAAAACAACTGGAAGCTCCTTTTCCCAACAAGTTTTTTCTAGTAAACTCCCTTTTGATACTCTGGATCACAGAATTCACCACCCAGATCATCACAAGCCTCCGCAGGAAAGACTCTGCAGCAATCATTAAAAACCAAGATTATCAATGCATATTCAAGCATGAAACAGTGTTGTTTCATAGGAAATGAGAGATCTTACGTCTTAGGACTGTCATATTGTAGATACTCTCTATCAACTGCCTCTGAGACACTGCCTCCCTTTTTAGCCTCTGGTTTTAGCTTTACTTCAGGATACATTTCGACATCACAAGCTTCACCTCCAACAGTTTCACAAGCCTCTGCTGGAAAAACACTTCCAAAAACCAACACAGAAGGGCAAATGAAGGTATTGAATTTGATATATTGTTGTGTAACAATGAGAACTAAAATGATTTAGCTTACGAGGACACGGAGCTGTAGTCAACCGTTGAAGGGTCTTGTCCAACCGCACTTGCCTTCGCTTTTAGGATGGGGCGATGAGTTTGTGAAGTGGGGTGCCTTCGCTTGGACCTAGATGGGATTGAGAACGCCATCAATTTGGTAGTTGGTGGGAGAAGGTAGCATGAGGATGGATGTGCCAGGGAAGGAGCTGCCTGCAACTGCATGATGAACAATGGCTGTCTGCTGCGAACTTGATGCCTGG

Coding sequence (CDS)

ATGGATGTGAAACGGACTGAGAGCCCGATTTATGCTCGCCAATGGAGCAGCGAATCAGGCAGCACAGGTGGTCCCGCGTCACCGGCCATGTCGCCGGCGCGCGGCCATCACGCTCGATCCTCCTCCGTTTCTGGAATTTCCAACATTAAGCGCACACAGAACTTCGCTGCAAAAGCTGCGGCTCAGCGGCTAGCTCAGGTTATGGCTTCTCAGACCGCCGTTGACGACGAAGACGATCAGGACGATTTAGGATTTCGTTATAGTGCTCCTCCTCCTATTTCGTTGTCTAGGAATGTTAATAACGGTGGTAGACTTGCTGTTCCTACTGCGAAAACCACTAGATCTCCCTCCCCTGGGTTAGCCAGAAATTTTTTAGAAGACATTCCTTCAGTTCGTTCCACTTCAGCAGGAAGATCGTCAATATCTCACCTTTCACTGCCAGTGGCTCCACCCAAAACAACACTGAGGACGGCAACTTCAATGCCACCCCTAGATCCGCCTACTCAAAGAGGAAAAAGATTCTCATCAGATACAGTGCGTTTTAATACTAAAGATTCAGGAGATCAGCGAGAAGCATCTGGCCTTCGTGATGAACTTGATATTCTACAAGAGGAGAACGAGAACATTCTTGTGAAGCTCAGGCTTGAGGAAGAGAGATGTAAAGAAGCAGAAACAAGAGTTAGGGAACTTGAGAAGCAGGTTGCTTCTCTGGGAGAAGGTGTTTCTTTAGAAGCCAAACTTTTGAGCAGGAAGGAAGCTGCATTACGTCAGAGAGAGGCTGCACTTAAAGAAGCAAAACAATCGAAGGATGGGGGGGACAAGGAAATTGAATCCCTTAAATCTGAAGTTAAGAAAGCAAAAGAAGAGACTATAAGTGTTGTTCAACACCTTCATGGAGTTGAACATGATGTGAAAGCCCTTCGATCTATGACGCAAAGAATGATTTTGACTCCGAAGGAGATGGAAGAAGTCGTTCTAAAAAGGTGTTGGCTTGCTCGCTACTGGGGACTGGCTGCAAAATATGGCATTTGTTTGGATATTGCTGTGACTAAGTACGAACACTGGTCATCTTTAGCACCACTGCCATTTGAGATTGTTATTTCTGCGGGACAAAAGGCTAAGGAAGAATTTTCTCAAAAAGGAGACCTGGATCCTGAGAAAAGGAGCCACTTTGTTCTTGATATAAGTGATCTAACCGGAGAAGGAAATATTGAAAGCATGCTATCTGTTGAAATGGGATTGAAAGAACTTGCTTCTTTGAAGGTGGAGGAGGCTCTTGTGCTTGCTCTGGCTCAACAGAGGCGACCAAATTCTGCGCGACAGTCTCTCTCAGATATCAAATCGCCAGTTGATCCGAAGTTCATGGAGGCATTTGAATTGAGCCCAGAGGAATCTGAAGATGTTCTTTTCAAAGAGGCATGGCTTACATATTTTTGGAGAAGAGCCAAAGCTCATGGTATTGAAGAAGATATTGCGAATGAACGACTTCAGTTCTGGATTAGTCGCAGTGCTCACTCTCCTTCATCACATGATGCTGTTGATGTTGAGCAAGGCCTCACAGAGCTCAGGAAGTTGGGAATTGAGCGTAGAATGTGGGAAGCATCACGTAAAGAGAGTGCTTGA

Protein sequence

MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAAAQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGLARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVRFNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWRRAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA

Homology

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy Swiss-Prot
Match: Q8RWD5 (Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana OX=3702 GN=SCD2 PE=1 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 2.1e-158
Identity = 335/565 (59.29%), Postives = 403/565 (71.33%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MD +R  SP+Y RQWS  S ST    SPAMSPA  H  +   + G S +KRTQN AAKAA
Sbjct: 1   MDRRRAGSPVYGRQWSESSNSTEA-TSPAMSPA--HRKQLGGIGGFSTVKRTQNVAAKAA 60

Query: 61  AQRLAQVMASQTA----VDDEDDQDDLGFRYS---------APPPI-SLSRNVNNGGR-- 120
           AQRLA+VMA Q       DDED+ +DL  R++         AP  I S   N +NG    
Sbjct: 61  AQRLAKVMALQNKDNGDEDDEDEDEDLSLRFASASLKPARHAPSSISSTGSNSSNGNNNL 120

Query: 121 LAVPTAKTTRSPSPGLARNFLEDIP-SVRSTSAGRSSISHLS-----LP--VAPPKTTLR 180
            AV  A  TRSPSP L RNF E +P SVRS SAGR S+S  S     +P  + P + +++
Sbjct: 121 PAVSFAPRTRSPSPALGRNFAEQVPSSVRSASAGRPSMSARSTTPTPIPNLMPPSRVSVK 180

Query: 181 TATSMPPLDPPTQ-RGKRFSSDTVRFNTKDSGDQREASGLRDELDILQEENENILVKLRL 240
           T  S+PPLDPPT+ R KRF +D    N+K+ GDQREAS LRDELD+LQEENEN+L KLR 
Sbjct: 181 TPVSIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENENVLEKLRR 240

Query: 241 EEERCKEAETRVRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKE 300
            EE+  EAE R +ELEKQVASLGEGVSLEAKLLSRKEAALRQREAAL  AKQ K G D+E
Sbjct: 241 AEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEE 300

Query: 301 IESLKSEVKKAKEETISVVQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYW 360
           I SL+SE++  K+E  +  + L   E + K+LR+MTQRMILT  EMEEVVLKRCWLARYW
Sbjct: 301 IVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYW 360

Query: 361 GLAAKYGICLDIAVTKYEHWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDI 420
           GLA ++GIC DIA ++ EHWS LAPLPFE+V SA QKAKE    KG  D   RS    D+
Sbjct: 361 GLAVQHGICADIAPSRQEHWSKLAPLPFELVTSAAQKAKELSWDKGGND---RSKAARDL 420

Query: 421 SDLTGEGNIESMLSVEMGLKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFM 480
           SDLTGEGNIESMLSVEMGL+ELASLKVE+A+VL  AQQR+ +  R ++SD K   + +F+
Sbjct: 421 SDLTGEGNIESMLSVEMGLRELASLKVEDAVVLIFAQQRKLSLVRHTVSDSKGHGESRFI 480

Query: 481 EAFELSPEESEDVLFKEAWLTYFWRRAKAHGIEEDIANERLQFWISRSA--HSPSSHDAV 539
           +A+EL   E EDV FK+AWL YFW RAK HG+E+DIA ER+Q WISRS+     +SHDA+
Sbjct: 481 DAYELGEAEQEDVAFKQAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTTSHDAL 540

[Close]

BLAST of Cp4.1LG12g10030 vs. NCBI nr
Match: XP_023547462.1 (coiled-coil domain-containing protein SCD2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1023 bits (2646), Expect = 0.0
Identity = 540/540 (100.00%), Postives = 540/540 (100.00%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG
Sbjct: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. NCBI nr
Match: KAG6576102.1 (Coiled-coil domain-containing protein SCD2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1015 bits (2624), Expect = 0.0
Identity = 535/540 (99.07%), Postives = 539/540 (99.81%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDT+R
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTLR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG
Sbjct: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIE+LKSEVKKAKEETISVVQ+LHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIEALKSEVKKAKEETISVVQNLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFV DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. NCBI nr
Match: XP_022953554.1 (coiled-coil domain-containing protein SCD2-like [Cucurbita moschata])

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 532/540 (98.52%), Postives = 536/540 (99.26%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHH RSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHTRSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FN KDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG
Sbjct: 181 FNAKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIE+LKSEVKKAKEETISVVQ+LHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIEALKSEVKKAKEETISVVQNLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALR MTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRCMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFV DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFM+AFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMDAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. NCBI nr
Match: XP_022991988.1 (coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1001 bits (2587), Expect = 0.0
Identity = 530/540 (98.15%), Postives = 532/540 (98.52%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISN KRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNFKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSP  GL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPFSGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKR SSD VR
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRCSSDAVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGE 
Sbjct: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGED 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKG LDPEKRSHFV DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGYLDPEKRSHFVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWI+RSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWINRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. NCBI nr
Match: XP_038906784.1 (coiled-coil domain-containing protein SCD2 [Benincasa hispida])

HSP 1 Score: 972 bits (2512), Expect = 0.0
Identity = 513/540 (95.00%), Postives = 524/540 (97.04%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQW+SESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWTSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTA DDEDDQDDLGFRYSAPPPISLSRNVNNG RLAVPTAKTTRSPSPGL
Sbjct: 61  AQRLAQVMASQTADDDEDDQDDLGFRYSAPPPISLSRNVNNGSRLAVPTAKTTRSPSPGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLED PSVRS+S GRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQR KRFSSDTVR
Sbjct: 121 ARNFLEDTPSVRSSSTGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQREKRFSSDTVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FNTKDSG+QREAS LRDELDILQEENENIL KLRLEEERCKEAETRVRELEKQVA+LGEG
Sbjct: 181 FNTKDSGNQREASALRDELDILQEENENILEKLRLEEERCKEAETRVRELEKQVAALGEG 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKE+KQSKDGGDKEIESLKSEVKK KEET+SVVQHLHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKESKQSKDGGDKEIESLKSEVKKEKEETMSVVQHLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALRSMTQRMILT KEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKGDLDPE RS+ V DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGDLDPESRSNLVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEA+VLALAQQRRPNSARQSLSD+K PVDPKFMEAFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEAIVLALAQQRRPNSARQSLSDMKPPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIA ERLQFWISRSAHSPSSHDAV+VEQGL ELRKLGIE RMWEASRKESA
Sbjct: 481 RAKAHGIEEDIAKERLQFWISRSAHSPSSHDAVEVEQGLIELRKLGIEHRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL
Match: A0A6J1GQ12 (coiled-coil domain-containing protein SCD2-like OS=Cucurbita moschata OX=3662 GN=LOC111456059 PE=4 SV=1)

HSP 1 Score: 1009 bits (2610), Expect = 0.0
Identity = 532/540 (98.52%), Postives = 536/540 (99.26%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHH RSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHTRSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FN KDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG
Sbjct: 181 FNAKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIE+LKSEVKKAKEETISVVQ+LHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIEALKSEVKKAKEETISVVQNLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALR MTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRCMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFV DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFM+AFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMDAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL
Match: A0A6J1JXT4 (coiled-coil domain-containing protein SCD2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488474 PE=4 SV=1)

HSP 1 Score: 1001 bits (2587), Expect = 0.0
Identity = 530/540 (98.15%), Postives = 532/540 (98.52%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISN KRTQNFAAKAA
Sbjct: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNFKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSP  GL
Sbjct: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPFSGL 120

Query: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTVR 180
           ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKR SSD VR
Sbjct: 121 ARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRCSSDAVR 180

Query: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEG 240
           FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGE 
Sbjct: 181 FNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGED 240

Query: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300
           VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV
Sbjct: 241 VSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGV 300

Query: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAP 360
           EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLAP
Sbjct: 301 EHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLAP 360

Query: 361 LPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASL 420
           LPFEIVISAGQKAKEEFSQKG LDPEKRSHFV DISDLTGEGNIESMLSVEMGLKELASL
Sbjct: 361 LPFEIVISAGQKAKEEFSQKGYLDPEKRSHFVPDISDLTGEGNIESMLSVEMGLKELASL 420

Query: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480
           KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR
Sbjct: 421 KVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWR 480

Query: 481 RAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540
           RAKAHGIEEDIANERLQFWI+RSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA
Sbjct: 481 RAKAHGIEEDIANERLQFWINRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKESA 540

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL
Match: A0A5A7T8V1 (Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001270 PE=4 SV=1)

HSP 1 Score: 958 bits (2476), Expect = 0.0
Identity = 508/541 (93.90%), Postives = 521/541 (96.30%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRT+SPIY RQWSSESGSTGGPASPAMSPARGHH+RSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTQSPIYGRQWSSESGSTGGPASPAMSPARGHHSRSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDD-QDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPG 120
           AQRLAQVMASQTA DD+DD QDDLGFRYSAPPPISLSRNVNNG RLAVP+AKTTRSPSPG
Sbjct: 61  AQRLAQVMASQTADDDDDDDQDDLGFRYSAPPPISLSRNVNNGSRLAVPSAKTTRSPSPG 120

Query: 121 LARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTV 180
           LARNFLED PSVRSTS GRSS+SH SLPVAPPKTTLRTATSMPPLDPPTQR KRFSSDTV
Sbjct: 121 LARNFLEDTPSVRSTSTGRSSVSHHSLPVAPPKTTLRTATSMPPLDPPTQRDKRFSSDTV 180

Query: 181 RFNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGE 240
           RF+TKDSG+QREAS LRDELDILQEENENIL KLRLEEERCK+AETRVRELEKQVA+LGE
Sbjct: 181 RFSTKDSGNQREASALRDELDILQEENENILEKLRLEEERCKDAETRVRELEKQVAALGE 240

Query: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHG 300
           GVSLEAKLLSRKEAALRQREAALKEAKQSK GGDKEIESLKSEVKKAKEET SVVQ LHG
Sbjct: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKGGGDKEIESLKSEVKKAKEETTSVVQQLHG 300

Query: 301 VEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLA 360
           VEHDVKALRSMTQRMILT KEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLA
Sbjct: 301 VEHDVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLA 360

Query: 361 PLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELAS 420
           PLPFEIVISAGQKAKEEFSQKGDLDPE RS+ V DISDLTGEGNIESMLSVEMGLKELAS
Sbjct: 361 PLPFEIVISAGQKAKEEFSQKGDLDPESRSNLVPDISDLTGEGNIESMLSVEMGLKELAS 420

Query: 421 LKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW 480
           LKVEEA+VLALAQ RRPNSARQSLSD+KSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW
Sbjct: 421 LKVEEAIVLALAQLRRPNSARQSLSDVKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW 480

Query: 481 RRAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKES 540
           RRAKAHGIEEDIA ERLQFWISRSAHSPSSHDAVDVEQGL ELRKLGIERRMWEASRKES
Sbjct: 481 RRAKAHGIEEDIAKERLQFWISRSAHSPSSHDAVDVEQGLVELRKLGIERRMWEASRKES 540

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL
Match: A0A1S3CBD0 (coiled-coil domain-containing protein SCD2 OS=Cucumis melo OX=3656 GN=LOC103498889 PE=4 SV=1)

HSP 1 Score: 956 bits (2470), Expect = 0.0
Identity = 507/541 (93.72%), Postives = 520/541 (96.12%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MDVKRT+SPIY RQWSSESGSTGGPASPAMSPARGHH+RSSSVSGISNIKRTQNFAAKAA
Sbjct: 1   MDVKRTQSPIYGRQWSSESGSTGGPASPAMSPARGHHSRSSSVSGISNIKRTQNFAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDD-QDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPG 120
           AQRLAQVMASQTA DD+DD QDDLGFRYSAPPPISL RNVNNG RLAVP+AKTTRSPSPG
Sbjct: 61  AQRLAQVMASQTADDDDDDDQDDLGFRYSAPPPISLYRNVNNGSRLAVPSAKTTRSPSPG 120

Query: 121 LARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTV 180
           LARNFLED PSVRSTS GRSS+SH SLPVAPPKTTLRTATSMPPLDPPTQR KRFSSDTV
Sbjct: 121 LARNFLEDTPSVRSTSTGRSSVSHHSLPVAPPKTTLRTATSMPPLDPPTQRDKRFSSDTV 180

Query: 181 RFNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGE 240
           RF+TKDSG+QREAS LRDELDILQEENENIL KLRLEEERCK+AETRVRELEKQVA+LGE
Sbjct: 181 RFSTKDSGNQREASALRDELDILQEENENILEKLRLEEERCKDAETRVRELEKQVAALGE 240

Query: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHG 300
           GVSLEAKLLSRKEAALRQREAALKEAKQSK GGDKEIESLKSEVKKAKEET SVVQ LHG
Sbjct: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKGGGDKEIESLKSEVKKAKEETTSVVQQLHG 300

Query: 301 VEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLA 360
           VEHDVKALRSMTQRMILT KEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLA
Sbjct: 301 VEHDVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLA 360

Query: 361 PLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELAS 420
           PLPFEIVISAGQKAKEEFSQKGDLDPE RS+ V DISDLTGEGNIESMLSVEMGLKELAS
Sbjct: 361 PLPFEIVISAGQKAKEEFSQKGDLDPESRSNLVPDISDLTGEGNIESMLSVEMGLKELAS 420

Query: 421 LKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW 480
           LKVEEA+VLALAQ RRPNSARQSLSD+KSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW
Sbjct: 421 LKVEEAIVLALAQLRRPNSARQSLSDVKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW 480

Query: 481 RRAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKES 540
           RRAKAHGIEEDIA ERLQFWISRSAHSPSSHDAVDVEQGL ELRKLGIERRMWEASRKES
Sbjct: 481 RRAKAHGIEEDIAKERLQFWISRSAHSPSSHDAVDVEQGLVELRKLGIERRMWEASRKES 540

[Close]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL
Match: A0A0A0KDG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091900 PE=4 SV=1)

HSP 1 Score: 954 bits (2466), Expect = 0.0
Identity = 508/541 (93.90%), Postives = 519/541 (95.93%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGG-PASPAMSPARGHHARSSSVSGISNIKRTQNFAAKA 60
           MDVKRTESPIY RQWSSESG+TGG PASPAMSPARGHH+RSSSVSGISNIKRTQNFAAKA
Sbjct: 1   MDVKRTESPIYGRQWSSESGTTGGGPASPAMSPARGHHSRSSSVSGISNIKRTQNFAAKA 60

Query: 61  AAQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPG 120
           AAQRLAQVMASQTA DD+DDQDDLGFRYSAPPPISLSRNVNNG RLA P+AKTTRSPSPG
Sbjct: 61  AAQRLAQVMASQTADDDDDDQDDLGFRYSAPPPISLSRNVNNGSRLAAPSAKTTRSPSPG 120

Query: 121 LARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKRFSSDTV 180
           LARNFLED  SVRSTS GRSSISH SLPVAPPKTTLRTATSMPPLDPPTQR KRFSSDTV
Sbjct: 121 LARNFLEDTSSVRSTSTGRSSISHHSLPVAPPKTTLRTATSMPPLDPPTQRDKRFSSDTV 180

Query: 181 RFNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGE 240
           RF+TKDSG+QREAS LRDELDILQEENENIL KLRLEEERCKEAETRVRELEKQVA+LGE
Sbjct: 181 RFSTKDSGNQREASALRDELDILQEENENILEKLRLEEERCKEAETRVRELEKQVAALGE 240

Query: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHG 300
           GVSLEAKLLSRKEAALRQREAALKEAKQSK GGDKEIESLKSEVKKAKEET SVVQHLHG
Sbjct: 241 GVSLEAKLLSRKEAALRQREAALKEAKQSKGGGDKEIESLKSEVKKAKEETTSVVQHLHG 300

Query: 301 VEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLA 360
           VEHDVKALRSMTQRMILT KEMEEVVLKRCWLARYWGLAAKYGIC+DIAVTKYEHWSSLA
Sbjct: 301 VEHDVKALRSMTQRMILTQKEMEEVVLKRCWLARYWGLAAKYGICMDIAVTKYEHWSSLA 360

Query: 361 PLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELAS 420
           PLPFEIVISAGQKAKEEFSQKGDLDPE RS+ V DISDLTGEGNIESMLSVEMGLKELAS
Sbjct: 361 PLPFEIVISAGQKAKEEFSQKGDLDPESRSNLVPDISDLTGEGNIESMLSVEMGLKELAS 420

Query: 421 LKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFW 480
           LKVEEA+VLALAQ RRPNSARQSLSD+KSPVDPKFMEAFELS EESEDVLFKEAWLTYFW
Sbjct: 421 LKVEEAIVLALAQLRRPNSARQSLSDLKSPVDPKFMEAFELSAEESEDVLFKEAWLTYFW 480

Query: 481 RRAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKES 540
           RRAKAHGIEEDIA ERLQFWISRSAHSPSSHDAVDVEQGL ELRKLGIERRMWEASRKES
Sbjct: 481 RRAKAHGIEEDIAKERLQFWISRSAHSPSSHDAVDVEQGLIELRKLGIERRMWEASRKES 540

[Close]

BLAST of Cp4.1LG12g10030 vs. TAIR 10
Match: AT5G13260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 612.1 bits (1577), Expect = 4.4e-175
Identity = 347/543 (63.90%), Postives = 407/543 (74.95%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           M+  RTESP Y RQWS +SG+T   A    SPAR HHARSSSV+ +SN+KR QN AAKAA
Sbjct: 1   MERARTESPSYFRQWSGDSGTTNAAAVAPSSPARHHHARSSSVTNMSNVKRAQNVAAKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQ-------DDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTT 120
           AQRLA+VMASQT  DD+DD        DDLGFRY APPP+S +RN ++      P A + 
Sbjct: 61  AQRLAKVMASQTNNDDDDDDDDDEVGGDDLGFRYGAPPPLSFTRNPSSTIAKPKPVASSA 120

Query: 121 RSPSPGLARNFLEDIPSVRSTSAGRSSISHLSLPVAPPKTTLRTATSMPPLDPPTQRGKR 180
             P P ++R       S    ++   S+     PV P K   +T   +P   P T+  KR
Sbjct: 121 VVPPPKISR-------SSSPANSPAVSVRASQPPVPPSKLRNQTTNPLPVATPKTE--KR 180

Query: 181 FSSDTVRFNTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQ 240
             +D   FN KDS DQ EAS LRDELD+LQEEN++IL KLRLE+E+CKEAE RVRELEKQ
Sbjct: 181 VLADIGHFNGKDSKDQHEASALRDELDMLQEENDSILEKLRLEDEKCKEAEARVRELEKQ 240

Query: 241 VASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISV 300
           V SLGEGVSLEAKLLSRKEAALRQREAALK+A+Q++DG ++E  +L+S+V+ AK ET ++
Sbjct: 241 VTSLGEGVSLEAKLLSRKEAALRQREAALKDARQNRDGTNRETTALRSQVETAKLETAAI 300

Query: 301 VQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYE 360
           V  L G E +V  LR+MT RMILT KEMEEVVLKRCWLARYWGLA++YGIC DIA +KYE
Sbjct: 301 VAQLQGAESEVNGLRTMTHRMILTQKEMEEVVLKRCWLARYWGLASRYGICSDIATSKYE 360

Query: 361 HWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMG 420
           +WSSLAPLPFEIV+SAGQKAKEE  +K   + EKRS  V DI+DLTGEGNIESMLSVEMG
Sbjct: 361 YWSSLAPLPFEIVLSAGQKAKEESWEKESEENEKRSQLVQDINDLTGEGNIESMLSVEMG 420

Query: 421 LKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEA 480
           LKEL SLKVE A+ + LAQ R  N+ R S  ++KSP  PK  E  ELS EESEDVLFKEA
Sbjct: 421 LKELTSLKVEVAITITLAQLRLANTTRLSDIELKSPGGPKITETLELSQEESEDVLFKEA 480

Query: 481 WLTYFWRRAKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWE 537
           WLTYFWRRA++ GIE D A ERL+FWISRSAHSPSSHDA++VEQGLTELRKL IERR+WE
Sbjct: 481 WLTYFWRRAQSLGIEVDTARERLRFWISRSAHSPSSHDAMEVEQGLTELRKLRIERRLWE 534

[Close]

BLAST of Cp4.1LG12g10030 vs. TAIR 10
Match: AT3G48860.2 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12429 Blast hits to 9751 proteins in 897 species: Archae - 180; Bacteria - 1190; Metazoa - 6552; Fungi - 1361; Plants - 886; Viruses - 50; Other Eukaryotes - 2210 (source: NCBI BLink). )

HSP 1 Score: 560.5 bits (1443), Expect = 1.5e-159
Identity = 335/565 (59.29%), Postives = 403/565 (71.33%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MD +R  SP+Y RQWS  S ST    SPAMSPA  H  +   + G S +KRTQN AAKAA
Sbjct: 1   MDRRRAGSPVYGRQWSESSNSTEA-TSPAMSPA--HRKQLGGIGGFSTVKRTQNVAAKAA 60

Query: 61  AQRLAQVMASQTA----VDDEDDQDDLGFRYS---------APPPI-SLSRNVNNGGR-- 120
           AQRLA+VMA Q       DDED+ +DL  R++         AP  I S   N +NG    
Sbjct: 61  AQRLAKVMALQNKDNGDEDDEDEDEDLSLRFASASLKPARHAPSSISSTGSNSSNGNNNL 120

Query: 121 LAVPTAKTTRSPSPGLARNFLEDIP-SVRSTSAGRSSISHLS-----LP--VAPPKTTLR 180
            AV  A  TRSPSP L RNF E +P SVRS SAGR S+S  S     +P  + P + +++
Sbjct: 121 PAVSFAPRTRSPSPALGRNFAEQVPSSVRSASAGRPSMSARSTTPTPIPNLMPPSRVSVK 180

Query: 181 TATSMPPLDPPTQ-RGKRFSSDTVRFNTKDSGDQREASGLRDELDILQEENENILVKLRL 240
           T  S+PPLDPPT+ R KRF +D    N+K+ GDQREAS LRDELD+LQEENEN+L KLR 
Sbjct: 181 TPVSIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENENVLEKLRR 240

Query: 241 EEERCKEAETRVRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKE 300
            EE+  EAE R +ELEKQVASLGEGVSLEAKLLSRKEAALRQREAAL  AKQ K G D+E
Sbjct: 241 AEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEE 300

Query: 301 IESLKSEVKKAKEETISVVQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYW 360
           I SL+SE++  K+E  +  + L   E + K+LR+MTQRMILT  EMEEVVLKRCWLARYW
Sbjct: 301 IVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYW 360

Query: 361 GLAAKYGICLDIAVTKYEHWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDI 420
           GLA ++GIC DIA ++ EHWS LAPLPFE+V SA QKAKE    KG  D   RS    D+
Sbjct: 361 GLAVQHGICADIAPSRQEHWSKLAPLPFELVTSAAQKAKELSWDKGGND---RSKAARDL 420

Query: 421 SDLTGEGNIESMLSVEMGLKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFM 480
           SDLTGEGNIESMLSVEMGL+ELASLKVE+A+VL  AQQR+ +  R ++SD K   + +F+
Sbjct: 421 SDLTGEGNIESMLSVEMGLRELASLKVEDAVVLIFAQQRKLSLVRHTVSDSKGHGESRFI 480

Query: 481 EAFELSPEESEDVLFKEAWLTYFWRRAKAHGIEEDIANERLQFWISRSA--HSPSSHDAV 539
           +A+EL   E EDV FK+AWL YFW RAK HG+E+DIA ER+Q WISRS+     +SHDA+
Sbjct: 481 DAYELGEAEQEDVAFKQAWLMYFWGRAKLHGVEDDIAEERVQLWISRSSGKSQTTSHDAL 540

[Close]

BLAST of Cp4.1LG12g10030 vs. TAIR 10
Match: AT5G23700.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 484.2 bits (1245), Expect = 1.4e-136
Identity = 304/579 (52.50%), Postives = 375/579 (64.77%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MD++R  SP+Y RQWS  S  T    SP+MSPA  H  +   V G+S +KRTQN A KAA
Sbjct: 1   MDLRRPSSPVYGRQWSRSSNGTES-RSPSMSPA--HRNQIGGVGGLSTVKRTQNVATKAA 60

Query: 61  AQRLAQVMASQTAVDDEDDQDDLGFRYSAPPPISLSRNVNNGGRLAVPTAKTTRSPSPGL 120
           AQRLA+VMA Q   ++EDD DD      APP         + G +    A+  RS SP +
Sbjct: 61  AQRLAKVMALQNKDNEEDDDDDDHEFKFAPP---------SSGPINGSFARRNRSHSPAI 120

Query: 121 ARNFLEDIPSVRSTSAGR-SSISHLSLPVA-----PPKTTLRTATSMPPLDPP-TQRGKR 180
            RN  E + SVRS+S GR S+ S  S P A     PPK +L+    +PP+D     R +R
Sbjct: 121 GRNITEQVTSVRSSSTGRPSTFSRSSTPNASPLWMPPKASLKPPVIIPPIDHSFKDRDQR 180

Query: 181 FSSDTVRF-NTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEK 240
           +  D  R  N++D G QREAS LRDE+D+LQEENE +L KL   EE  + AE R RELEK
Sbjct: 181 YFGDVPRLVNSRDKGYQREASALRDEVDMLQEENEIVLEKLHRAEEMREAAEARARELEK 240

Query: 241 QVASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETIS 300
           QVASLGEGVSLEAKLLSRKEAALRQREAALK A + KDG  +E+ SL+SE++  K+E  +
Sbjct: 241 QVASLGEGVSLEAKLLSRKEAALRQREAALKAANEKKDGKKEEVVSLRSEIQILKDEAET 300

Query: 301 VVQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKY 360
             + L   E + KALR MTQRM+LT  EMEEV LKRCWLARYWGLA ++GIC DIA +++
Sbjct: 301 AAECLQEAESEAKALRIMTQRMVLTQDEMEEVALKRCWLARYWGLAVQHGICADIAPSRH 360

Query: 361 EHWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEM 420
           E WS+LAPLPFE+VISA QK K+        D  K + F   +SDL GEGNIESMLSVEM
Sbjct: 361 EKWSALAPLPFELVISAAQKTKD--------DQSKTARF---LSDLPGEGNIESMLSVEM 420

Query: 421 GLKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAF-------------- 480
           GL+ELASLKVE+A++LA AQ+R P+  RQ   D K   +  F+E++              
Sbjct: 421 GLRELASLKVEDAVMLAFAQKRTPSLVRQ---DSKGHGELSFVESYGKRRESKHAQYIIS 480

Query: 481 -----------------ELSPEESEDVLFKEAWLTYFWRRAKAHGIEEDIANERLQFWIS 540
                            E+   E EDV FK+AWL YFW RAK H +EEDIA+ER QFW S
Sbjct: 481 AVKLDEILTMLSHFSNAEIKEGEQEDVAFKQAWLMYFWGRAKLHSVEEDIADERFQFWTS 540

[Close]

BLAST of Cp4.1LG12g10030 vs. TAIR 10
Match: AT3G48860.1 (unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G23700.1); Has 12232 Blast hits to 9546 proteins in 892 species: Archae - 172; Bacteria - 1174; Metazoa - 6487; Fungi - 1343; Plants - 856; Viruses - 50; Other Eukaryotes - 2150 (source: NCBI BLink). )

HSP 1 Score: 449.5 bits (1155), Expect = 3.8e-126
Identity = 281/483 (58.18%), Postives = 337/483 (69.77%), Query Frame = 0


Query: 1   MDVKRTESPIYARQWSSESGSTGGPASPAMSPARGHHARSSSVSGISNIKRTQNFAAKAA 60
           MD +R  SP+Y RQWS  S ST    SPAMSPA  H  +   + G S +KRTQN AAKAA
Sbjct: 1   MDRRRAGSPVYGRQWSESSNSTEA-TSPAMSPA--HRKQLGGIGGFSTVKRTQNVAAKAA 60

Query: 61  AQRLAQVMASQTA----VDDEDDQDDLGFRYS---------APPPI-SLSRNVNNGGR-- 120
           AQRLA+VMA Q       DDED+ +DL  R++         AP  I S   N +NG    
Sbjct: 61  AQRLAKVMALQNKDNGDEDDEDEDEDLSLRFASASLKPARHAPSSISSTGSNSSNGNNNL 120

Query: 121 LAVPTAKTTRSPSPGLARNFLEDIP-SVRSTSAGRSSISHLS-----LP--VAPPKTTLR 180
            AV  A  TRSPSP L RNF E +P SVRS SAGR S+S  S     +P  + P + +++
Sbjct: 121 PAVSFAPRTRSPSPALGRNFAEQVPSSVRSASAGRPSMSARSTTPTPIPNLMPPSRVSVK 180

Query: 181 TATSMPPLDPPTQ-RGKRFSSDTVRFNTKDSGDQREASGLRDELDILQEENENILVKLRL 240
           T  S+PPLDPPT+ R KRF +D    N+K+ GDQREAS LRDELD+LQEENEN+L KLR 
Sbjct: 181 TPVSIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENENVLEKLRR 240

Query: 241 EEERCKEAETRVRELEKQVASLGEGVSLEAKLLSRKEAALRQREAALKEAKQSKDGGDKE 300
            EE+  EAE R +ELEKQVASLGEGVSLEAKLLSRKEAALRQREAAL  AKQ K G D+E
Sbjct: 241 AEEKRVEAEARAKELEKQVASLGEGVSLEAKLLSRKEAALRQREAALNVAKQKKSGKDEE 300

Query: 301 IESLKSEVKKAKEETISVVQHLHGVEHDVKALRSMTQRMILTPKEMEEVVLKRCWLARYW 360
           I SL+SE++  K+E  +  + L   E + K+LR+MTQRMILT  EMEEVVLKRCWLARYW
Sbjct: 301 IVSLRSELENLKDEATTAAERLQEAESEAKSLRTMTQRMILTQDEMEEVVLKRCWLARYW 360

Query: 361 GLAAKYGICLDIAVTKYEHWSSLAPLPFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDI 420
           GLA ++GIC DIA ++ EHWS LAPLPFE+V SA QKAKE    KG  D   RS    D+
Sbjct: 361 GLAVQHGICADIAPSRQEHWSKLAPLPFELVTSAAQKAKELSWDKGGND---RSKAARDL 420

Query: 421 SDLTGEGNIESMLSVEMGLKELASLKVEEALVLALAQQRRPNSARQSLSDIKSPVDPKFM 459
           SDLTGEGNIESMLSVEMGL+ELASLKVE+A+VL  AQQR+ +  R ++SD K   + +F+
Sbjct: 421 SDLTGEGNIESMLSVEMGLRELASLKVEDAVVLIFAQQRKLSLVRHTVSDSKGHGESRFI 477

[Close]

BLAST of Cp4.1LG12g10030 vs. TAIR 10
Match: AT4G25070.1 (unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48860.2); Has 14837 Blast hits to 10961 proteins in 1163 species: Archae - 189; Bacteria - 1924; Metazoa - 7665; Fungi - 1127; Plants - 653; Viruses - 80; Other Eukaryotes - 3199 (source: NCBI BLink). )

HSP 1 Score: 401.4 bits (1030), Expect = 1.2e-111
Identity = 209/357 (58.54%), Postives = 273/357 (76.47%), Query Frame = 0


Query: 182 NTKDSGDQREASGLRDELDILQEENENILVKLRLEEERCKEAETRVRELEKQVASLGEGV 241
           N+    D REAS LRDELD+LQEEN+NI+ KL+  EER + AE R +ELEKQVASLGEG 
Sbjct: 393 NSNQQEDDREASALRDELDMLQEENDNIMDKLQRAEERREAAEARAKELEKQVASLGEGA 452

Query: 242 SLEAKLLSRKEAALRQREAALKEAKQSKDGGDKEIESLKSEVKKAKEETISVVQHLHGVE 301
           + + KLL RKEAALRQREAAL+ A+Q +DG ++E  +L SE +  K+E     + L  VE
Sbjct: 453 NFDVKLLKRKEAALRQREAALRAAEQKRDGRNRETNALSSEFQSLKDEAEKSTEQLQEVE 512

Query: 302 HDVKALRSMTQRMILTPKEMEEVVLKRCWLARYWGLAAKYGICLDIAVTKYEHWSSLAPL 361
            ++K+LR+M  R IL+ +EMEEVVLKRCWLARYW LA ++GIC DI+ ++YEHWS+LAPL
Sbjct: 513 AEIKSLRTMIHRTILSQEEMEEVVLKRCWLARYWELAVQHGICEDISTSRYEHWSALAPL 572

Query: 362 PFEIVISAGQKAKEEFSQKGDLDPEKRSHFVLDISDLTGEGNIESMLSVEMGLKELASLK 421
           P E+V+SA QK+++ +   G       S  + + SDL GEGNIESML+VE GL+E+ASLK
Sbjct: 573 PSEVVLSAAQKSEDSWQTGG--SDRTWSKVISNFSDLNGEGNIESMLAVETGLREIASLK 632

Query: 422 VEEALVLALAQQRRPNSARQSLSDIKSPVDPKFMEAFELSPEESEDVLFKEAWLTYFWRR 481
           VE+A++LAL++ R+ N ARQ+++D +   +PKF E FELS +E +D+LFKEAWL YFW+R
Sbjct: 633 VEDAVMLALSRYRQTNVARQAVTDPRVQGEPKFSETFELSHDEQQDILFKEAWLLYFWKR 692

Query: 482 AKAHGIEEDIANERLQFWISRSAHSPSSHDAVDVEQGLTELRKLGIERRMWEASRKE 539
           AK HG+E DIA ERLQFWI+R     SSHDA+DVE+G+ ELRKLGIE+++WE SRKE
Sbjct: 693 AKIHGVESDIAEERLQFWINRLGQHSSSHDAIDVERGMRELRKLGIEQQLWETSRKE 747

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g10030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RWD5	2.1e-158	59.29	Coiled-coil domain-containing protein SCD2 OS=Arabidopsis thaliana OX=3702 GN=SC...	[more]

BLAST of Cp4.1LG12g10030 vs. NCBI nr


Match Name	Identity	Description
XP_023547462.1	100.00	coiled-coil domain-containing protein SCD2-like [Cucurbita pepo subsp. pepo]	[more]
KAG6576102.1	99.07	Coiled-coil domain-containing protein SCD2, partial [Cucurbita argyrosperma subs...	[more]
XP_022953554.1	98.52	coiled-coil domain-containing protein SCD2-like [Cucurbita moschata]	[more]
XP_022991988.1	98.15	coiled-coil domain-containing protein SCD2-like isoform X1 [Cucurbita maxima]	[more]
XP_038906784.1	95.00	coiled-coil domain-containing protein SCD2 [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g10030 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1GQ12	98.52	coiled-coil domain-containing protein SCD2-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JXT4	98.15	coiled-coil domain-containing protein SCD2-like isoform X1 OS=Cucurbita maxima O...	[more]
A0A5A7T8V1	93.90	Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CBD0	93.72	coiled-coil domain-containing protein SCD2 OS=Cucumis melo OX=3656 GN=LOC1034988...	[more]
A0A0A0KDG1	93.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091900 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g10030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G13260.1	4.4e-175	63.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G48860.2	1.5e-159	59.29	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem...	[more]
AT5G23700.1	1.4e-136	52.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G48860.1	3.8e-126	58.18	unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: plasma mem...	[more]
AT4G25070.1	1.2e-111	58.54	unknown protein; EXPRESSED IN: cultured cell; BEST Arabidopsis thaliana protein ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 192..240
None	No IPR available	COILS	Coil	Coil	coord: 248..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..55
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 177..196
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..196
None	No IPR available	PANTHER	PTHR31762:SF11	MYOSIN	coord: 1..539
IPR040321	Coiled-coil domain-containing protein SCD2-like	PANTHER	PTHR31762	FAS-BINDING FACTOR-LIKE PROTEIN	coord: 1..539

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g10030.1	Cp4.1LG12g10030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000911	cytokinesis by cell plate formation