Cp4.1LG12g09260 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g09260
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Proteasome subunit alpha type
Location	Cp4.1LG12: 5854802 .. 5859359 (+)
RNA-Seq Expression	Cp4.1LG12g09260
Synteny	Cp4.1LG12g09260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAGTTTCGAAGTCACTTTTGCCGGGTGCTGCTTGCCTGAGGGGTTTTCTTGGCGAGAAAGTTTTTTCGCGGCTCCCCTGCTATATTCTCCGAGCTCTCAATATCCATTTCCCCCACAGATCCTGAACCCGTTGAAGCCCTAATTCATCTGAATCAGAAGCCATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCCTATTTCAAGTCGGTATGTATGCAATTCCTCTTCGATCTCGTTTTTGTTTCGATCGAACTAGTTGAACTATATGCTAGGGCTTGACCTTTTCAATTAATGTTCAAGAATCATTGTTTCTGAAGTGATTTAGCTTGACCGTATTAGTTTGAATGGTGAAAACTCTCGTTAAAAGAAAGAAATATCTCCCTTGTGAAGTGTGAAGGTGTTTTTGCTGGAAGTATGGATGAGTGTGGTGTGGTAACGGTAGGGGCTCTGCTTTAATTAAATGTTTCGAGTGTTCATTTCACTTGGGATTACTGTCGAGTGAATGTGTTTAGTATCCATCGGACGGAATTTAGGGGAAACGCGGAATCTATAGTCATATTTGCTGCGGGGTAACGAGGGTTTTTTTCTTCTTCTCTCTTATAGGTAATTTAGTGTATTGCCTTTGATCTGTGCGAGTGTTAGCCTTTTCTTGAGTGCGGTGTATTTATTGAATATTTGGAAACCTTAGGCTGGAATCGCGAGGATTAACATTTAACACGTCTAGGATGCTGGCTTTGGTTTTAGTGACTCCTTGTATTAGAAAAGATAGCACAAGGAATTGTTTCCAATCAGTAAACTGTTGTAATATCCCAGACGCCTACATTTTGAACGAAGTTATGCTTATCAAACATTTTTCCATTTGGTTTTGAGTTTTAGCTTGTCAGCAATGTTATATCTTCATGAATTGTTCATTTTGAAATCATCAACTAGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTCCCGGTGAGTATTATTGGCTTGGCCATGCCATTTCCTCGGACTCTCCTGAGCTGAATATTTCGATTCACTTATAATAATGCCCATTGTTTTTGCAGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGGTTTCTTTTATGTCTTTTTGCCACTTATTGTTCAATAAAGAATCATGATTCAAGACAGATTTCTTGTCTTATGCTTGTATCAACCTCAGAATCAACTGATGGCGATGATGAAAGTGTACACATTGTGAGATGGCAGCTTATGATAAGTTGGTTCAAGAGGAATTCCTCGACTACATTCCCATATTAGTCTTTTTAGGTGTATGATACTCGTGTGTTTACTCAGGCTAGTGCTAATGATGTCTATCACAGCGATAATTTTTTTCTACACTACATTGTACTGTTTTTAGTTCAAAGTACCACATGCAGTTGCTTCATTGTAAAAATCTACTTTGCTCAAATTTGGACGATAGAATTCCTTATCCAATTTTTCTATACCACTCAGCTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGTATTCTGCTTATTTCTGTCTACAATATTTTCCTTGCCTTTTGAGTTATCAATTGCATAGGAAGTGCCGGTGATTTGTTTGTCTTCAGTTCTATGGCAATATTTAACTATGTTACGGTATTTCTTTTGAGTTTAGACAAGGCTTTTAAGCACAGACACTTTTGTTGATGTTACTTTCCAAGTTAGATACATGGACATCAATCATTGAGTTTTGGTATATCACAGCAGGCACTAGACTAATGATATCGGAATTAACTGTTTTGCAGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGGTTGGTTTCTGGTTTATTTCGTATTTTAGATCCACATAGTGCTTGCTTTAACCTATTATACTATTTGTCATCAGCTTTTGAACTGGTCATTATCCATCCTTTAAATTCTTTTCTCTCCCTTCTGAATTTTCTTTAGTGGCAATGGTTTTGGGGATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGTAAGTAACCTTCTTGAAGAAAAATTATTGGGACAGGAATTTAATGCCAATTTGCAGCATGTACCTATGTTCTAAATTTTATATTTTCCTTGAGGTGGATGCCACATTGGCAAAGATTTCCATTCAAATTCCTTTCCGGATGATGTTGCTAAAAAAAAAAAAAAGAAGAAGTCTTAGAATTATAGCTTTATAGACTTAGCTCATATTTAAATACATACAATTTGATTGGTGTGATTTCTTAAGCTACCAGAGGGTGGGTTGTGGAATATAAGGAAACAACTAGTTATTATATTGTCTTGCTTGTAGTTTGAAATTGTATTTATTTATACAAAAGTAGTATGGATATGTATTTTTTTATAAAAAATTTATTTAAATTATAGTAATTTGCTTTCAAATGTAAAATTTGTTGATCATCATCATTATAGTGATGCGTAGAGAACCTTTGCTATTTAGAGTGCACTGCACTTGAGCTGCTACACAATCTACCCGATTTGATAGTGGATGAAGGCATGGGTTGACTTTTGAAAAATGACTAATTCTTTCTTAAGATCTGAACAAAGGATTGTTTTAATTTCTCATTTCCTTTTATATTACCAACTATACTTGTTTGTTATGTGCTCCCTTGCTGTAGTTTCTTTTACCTTTTAAACTTGACATTAATATTTGGTTAACCATGCGAATAAGAATTCACAACTATGTGATTTAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGGTAGATCTCATTTAATTTCAAATGTTTAGACCTTGTACCAGTCACATTGTTTTAATAGTTGGGAGGCATCAATATATCTATATGCATACTTCCCGAAAGAAATTTTTACTCTTCATGTTTTAGTTATTCATAATTGTTAGACGAACACGACTCTGCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTTATGGTTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGAGAGTATTCTTTGTTTATAAACCCATGACCATTCCCTAAATTAGCCGTTGTGGGACTTTCATCATCCAACAAGAATAACCCATATTTTTCCCCAACTGTTTTGCTTAGAAAGAGAACTGAGGACTTAATTCAAAATATTCTCTGAAATTACTTTGGACCTAATATTCCTCGTTATTTTCATTTCATATTCCAAAACACGGTTTTGATACTGGTGGCAACATAGAAATGCAAATCTGATATGATTTTGACTATCTTTTTATGTGATAATCTTGTTTCTAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATCGAGGTACTTAAATTTCATCGTTTCTTCTTCAACAATTATGCTTGAGATTCTATCAAATAGAATGTTTAATCCAAATTCTGATTTGACGCGCTAGCTTCCACTATGTTGTTGACCATTAGTTATGTTATTGTCTGCAAAGGGTCACTGTATTCCACTGTATATATGTTACTTAAGTAAACTGCACCATAATTATGAACATAACACGAATGTATTTACAACGTTTACAGGTGGGAGTGGTTCGGGTGGAGAATCCCATCTTCAGAGTACTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGATTGACGCAAACCTCTCTGGAGAAGCATATTGAGAACGTCTAACGACTTCGTTTCAGATGTCGGTTATCGCCGAGTTGCGTGCTTTATATATGCAAGTCCTTGAGGTAGTAGTTGTACTTGCTTCTGAATTGCTGTAGACGGTGACATTCCCATTTTACTTAAAACACTACATCAAAAACAGTCATCTTTAGAATTTGTATCTCAGAGAAACTCATCATGTTACATTATTTAACTCCCAATTCCTGTGGCTATATAACATGATGGTAAGTAGATTATGAACCCTCTTTCTCTATTTCTTGTGATGCTAGAGATAAAACCTCGTAAAGCTTACGGTATTACATGGTAGTTTGTGTGATGTCCCACATTGATTGGGGAGGACAACAAAACACCATTTATGAGGGTATGGAAACCTTCCCCCTTCCCCTAGCATACGAGTTTTAGTCTGAAAGAGAAAGTCCAAAGAGGACAATATCTACTAGTAGTGGATCGAATAGTGGTGTAATTCTAGAATTGGCGGGGGTTTGAATAGATACTTGAGTTTACGTGGAGCATTCATTGATAAATTTAAATTATAGTCGTCGTTATCTGCATTGTATGGGGACAACTTG

mRNA sequence

CTAGTTTCGAAGTCACTTTTGCCGGGTGCTGCTTGCCTGAGGGGTTTTCTTGGCGAGAAAGTTTTTTCGCGGCTCCCCTGCTATATTCTCCGAGCTCTCAATATCCATTTCCCCCACAGATCCTGAACCCGTTGAAGCCCTAATTCATCTGAATCAGAAGCCATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCCTATTTCAAGTCGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTCCCGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGAATCAACTGATGGCGATGATGAAAGTGTACACATTGTGAGATGGCAGCTTATGATAACTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGTGGCAATGGTTTTGGGGATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATCGAGGTGGGAGTGGTTCGGGTGGAGAATCCCATCTTCAGAGTACTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGATTGACGCAAACCTCTCTGGAGAAGCATATTGAGAACGTCTAACGACTTCGTTTCAGATGTCGGTTATCGCCGAGTTGCGTGCTTTATATATGCAAGTCCTTGAGGTAGTAGTTGTACTTGCTTCTGAATTGCTGTAGACGGTGACATTCCCATTTTACTTAAAACACTACATCAAAAACAGTCATCTTTAGAATTTGTATCTCAGAGAAACTCATCATGTTACATTATTTAACTCCCAATTCCTGTGGCTATATAACATGATGGTAAGTAGATTATGAACCCTCTTTCTCTATTTCTTGTGATGCTAGAGATAAAACCTCGTAAAGCTTACGGTATTACATGGTAGTTTGTGTGATGTCCCACATTGATTGGGGAGGACAACAAAACACCATTTATGAGGGTATGGAAACCTTCCCCCTTCCCCTAGCATACGAGTTTTAGTCTGAAAGAGAAAGTCCAAAGAGGACAATATCTACTAGTAGTGGATCGAATAGTGGTGTAATTCTAGAATTGGCGGGGGTTTGAATAGATACTTGAGTTTACGTGGAGCATTCATTGATAAATTTAAATTATAGTCGTCGTTATCTGCATTGTATGGGGACAACTTG

Coding sequence (CDS)

ATGAGCCGTGGAAGTGGAGGAGGATACGATCGTCACATTACTATATTCTCACCCGAGGGCCGCCTATTTCAAGTCGAGTATGCGTTCAAGGCTGTGAAATCTGCTGGAATTACCTCGATTGGTGTCAAAGGAAAGGATTCGGTTTGTGTTGTGACTCAGAAGAAGGTCCCGGATAAACTTTTGGATCAGACAAGTGTCACTCACCTTTTCTCCATCACTAAGTATCTGGGCTTGCTCGCAACTGGCATTACAGAATCAACTGATGGCGATGATGAAAGTGTACACATTGTGAGATGGCAGCTTATGATAACTGATGCCAGATCACTGGTTCAACAAGCAAGGAATGAAGCAGCAGAGTTTCGATTCCGATATGGCTATGAGATGCCTGTGGATGTATTGGCTAAATGGATTGCTGATAAATCACAAGTCTATACCCAGCATGCTTATATGAGACCACTTGGAGTTGTGGCAATGGTTTTGGGGATTGATGATGAGTTTGGACCTCGCCTCTATAAATGTGATCCTGCCGGTCATTTTTTTGGTCACAAGGCCACTAGTGCTGGACTTAAGGAGCAGGAGGCTATTAATTTCTTGGAAAAGAAAATGAAGAATGATCCTGCTTTTACTTATGAGGAGACAGTGCAGACTGCAATTTCTGCACTTCAATCAGTGCTGCAAGAAGATTTCAAGGCCAATGAGATCGAGGTGGGAGTGGTTCGGGTGGAGAATCCCATCTTCAGAGTACTAAGTACTGAAGAAGTCGATGAGCATTTGACTGCCATCAGCGAGCGAGATTGA

Protein sequence

MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEFRFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRVENPIFRVLSTEEVDEHLTAISERD

Homology

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot
Match: Q9XG77 (Proteasome subunit alpha type-6 OS=Nicotiana tabacum OX=4097 GN=PAA1 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.1e-123
Identity = 224/265 (84.53%), Postives = 241/265 (90.94%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSV+HLF ITKYLGLLATG+T                    DAR+LVQQARNEAAEF
Sbjct: 61  LDQTSVSHLFPITKYLGLLATGMT-------------------ADARTLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF+YGYEMPVDVL+KWIADKSQVYTQHAYMRPLGVVAM+LGID+E GP+L+KCDPAGHFF
Sbjct: 121 RFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAG KEQEAINFLEKKMKNDPAF+YEETVQTAISALQSVLQEDFKA+EIEVGVV+
Sbjct: 181 GHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVK 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            E+PIFRVL+TEE+DEHLTAISERD
Sbjct: 241 KEDPIFRVLTTEEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot
Match: O48551 (Proteasome subunit alpha type-6 OS=Glycine max OX=3847 GN=PAA1 PE=2 SV=2)

HSP 1 Score: 443.4 bits (1139), Expect = 1.9e-123
Identity = 223/265 (84.15%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGY+RHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDS+CVVT KKVPDKL
Sbjct: 1   MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LD TSVTHLF ITKYLGLLATG+T                    DAR+LVQQARNEAAEF
Sbjct: 61  LDNTSVTHLFPITKYLGLLATGMT-------------------ADARTLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF YGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDE+GP+LYKCDPAGH+F
Sbjct: 121 RFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLK+QEAINFLEKKMKNDP+FTYEETVQTAISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            +NP FRVL+T+E+DEHLTAISERD
Sbjct: 241 KDNPEFRVLTTDEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot
Match: O81147 (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 4.3e-120
Identity = 216/265 (81.51%), Postives = 235/265 (88.68%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQ+SV+HLF +TKYLGLLATG+T                    D+RSLVQQARNEAAEF
Sbjct: 61  LDQSSVSHLFPVTKYLGLLATGMT-------------------ADSRSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVLGID+E GP LYKCDPAGHF+
Sbjct: 121 RFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFY 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAG+KEQEA+NFLEKKMK +PAFTY+ETVQTAISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            ++P+FR L TEE+DEHLTAISERD
Sbjct: 241 ADDPLFRSLRTEEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot
Match: O81146 (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 SV=2)

HSP 1 Score: 431.4 bits (1108), Expect = 7.3e-120
Identity = 215/265 (81.13%), Postives = 235/265 (88.68%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQ+SVTHLF ITKY+GL+ATGIT                    DARSLVQQARN+AAEF
Sbjct: 61  LDQSSVTHLFPITKYIGLVATGIT-------------------ADARSLVQQARNQAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+G+D+E GP LYKCDPAGHF+
Sbjct: 121 RFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFY 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAG+KEQEA+NFLEKKMK +P+FT++ETVQTAISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            ENP FR L+TEE++EHLTAISERD
Sbjct: 241 AENPEFRALTTEEIEEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot
Match: Q9LSU3 (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica OX=39947 GN=PAA1 PE=2 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 4.9e-116
Identity = 211/265 (79.62%), Postives = 231/265 (87.17%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRG+G GYDRHITIFSPEGRL+QVEYAFKAVKSAG+TSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LD TSVTHLF ITKY+GLLATG+T                    DARSLV QARNEAAEF
Sbjct: 61  LDHTSVTHLFPITKYIGLLATGLT-------------------ADARSLVYQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF++GYEMPVDVLAKWIADK+QVYTQHAYMRPLGVVAMVLG D+E   +L+KCDPAGHFF
Sbjct: 121 RFKWGYEMPVDVLAKWIADKAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMK+DP F+YEETVQ AISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            ++ +FR L+TEE+D+HLTAISERD
Sbjct: 241 KDDRVFRALTTEEIDQHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. NCBI nr
Match: XP_023549157.1 (proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 474 bits (1220), Expect = 5.07e-168
Identity = 245/265 (92.45%), Postives = 245/265 (92.45%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
           VENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 VENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. NCBI nr
Match: XP_022953432.1 (proteasome subunit alpha type-6 [Cucurbita moschata] >XP_022992374.1 proteasome subunit alpha type-6 [Cucurbita maxima] >KAG6575436.1 Proteasome subunit alpha type-6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472 bits (1214), Expect = 4.16e-167
Identity = 244/265 (92.08%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. NCBI nr
Match: XP_023000291.1 (proteasome subunit alpha type-6-like [Cucurbita maxima] >KAG6593559.1 Proteasome subunit alpha type-6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025900.1 Proteasome subunit alpha type-6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 469 bits (1207), Expect = 4.86e-166
Identity = 241/265 (90.94%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIF+VLSTEE+DEHLTAISERD
Sbjct: 241 SENPIFKVLSTEEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. NCBI nr
Match: XP_022151687.1 (proteasome subunit alpha type-6-like [Momordica charantia])

HSP 1 Score: 468 bits (1205), Expect = 9.80e-166
Identity = 241/265 (90.94%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQ+YTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQIYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. NCBI nr
Match: XP_023515312.1 (proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 468 bits (1203), Expect = 1.98e-165
Identity = 240/265 (90.57%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIF+VLSTEE++EHLTAISERD
Sbjct: 241 SENPIFKVLSTEEIEEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL
Match: A0A6J1JXD2 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111488701 PE=3 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 2.02e-167
Identity = 244/265 (92.08%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL
Match: A0A6J1GN74 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111455988 PE=3 SV=1)

HSP 1 Score: 472 bits (1214), Expect = 2.02e-167
Identity = 244/265 (92.08%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL
Match: A0A6J1KFH2 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111494566 PE=3 SV=1)

HSP 1 Score: 469 bits (1207), Expect = 2.35e-166
Identity = 241/265 (90.94%), Postives = 244/265 (92.08%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIF+VLSTEE+DEHLTAISERD
Sbjct: 241 SENPIFKVLSTEEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL
Match: A0A6J1DE63 (Proteasome subunit alpha type OS=Momordica charantia OX=3673 GN=LOC111019600 PE=3 SV=1)

HSP 1 Score: 468 bits (1205), Expect = 4.75e-166
Identity = 241/265 (90.94%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAAEF
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQ+YTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQIYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVLSTEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLSTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL
Match: A0A5D3BY44 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001350 PE=3 SV=1)

HSP 1 Score: 466 bits (1200), Expect = 2.74e-165
Identity = 240/265 (90.57%), Postives = 243/265 (91.70%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAG TSIGVKGKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGTTSIGVKGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQTSVTHLFSITKYLGLLATGIT                    DARSLVQQARNEAA+F
Sbjct: 61  LDQTSVTHLFSITKYLGLLATGIT-------------------ADARSLVQQARNEAADF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDE+GPRLYKCDPAGHFF
Sbjct: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPRLYKCDPAGHFF 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR
Sbjct: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 265
            ENPIFRVL+TEEVDEHLTAISERD
Sbjct: 241 SENPIFRVLTTEEVDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. TAIR 10
Match: AT2G05840.1 (20S proteasome subunit PAA2 )

HSP 1 Score: 432.2 bits (1110), Expect = 3.1e-121
Identity = 216/265 (81.51%), Postives = 235/265 (88.68%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQ+SV+HLF +TKYLGLLATG+T                    D+RSLVQQARNEAAEF
Sbjct: 61  LDQSSVSHLFPVTKYLGLLATGMT-------------------ADSRSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVLGID+E GP LYKCDPAGHF+
Sbjct: 121 RFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFY 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAG+KEQEA+NFLEKKMK +PAFTY+ETVQTAISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            ++P+FR L TEE+DEHLTAISERD
Sbjct: 241 ADDPLFRSLRTEEIDEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. TAIR 10
Match: AT5G35590.1 (proteasome alpha subunit A1 )

HSP 1 Score: 431.4 bits (1108), Expect = 5.2e-121
Identity = 215/265 (81.13%), Postives = 235/265 (88.68%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQ+SVTHLF ITKY+GL+ATGIT                    DARSLVQQARN+AAEF
Sbjct: 61  LDQSSVTHLFPITKYIGLVATGIT-------------------ADARSLVQQARNQAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF YGYEMPVD+LAKWIADKSQVYTQHAYMRPLGVVAMV+G+D+E GP LYKCDPAGHF+
Sbjct: 121 RFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFY 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVR 240
           GHKATSAG+KEQEA+NFLEKKMK +P+FT++ETVQTAISALQSVLQEDFKA EIEVGVVR
Sbjct: 181 GHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVR 240

Query: 241 VENPIFRVLSTEEVDEHLTAISERD 266
            ENP FR L+TEE++EHLTAISERD
Sbjct: 241 AENPEFRALTTEEIEEHLTAISERD 246

[Close]

BLAST of Cp4.1LG12g09260 vs. TAIR 10
Match: AT2G05840.2 (20S proteasome subunit PAA2 )

HSP 1 Score: 387.9 bits (995), Expect = 6.6e-108
Identity = 194/236 (82.20%), Postives = 209/236 (88.56%), Query Frame = 0


Query: 1   MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKL 60
           MSRGSG GYDRHITIFSPEGRLFQVEYAFKAVK+AGITSIGV+GKDSVCVVTQKKVPDKL
Sbjct: 1   MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60

Query: 61  LDQTSVTHLFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEF 120
           LDQ+SV+HLF +TKYLGLLATG+T                    D+RSLVQQARNEAAEF
Sbjct: 61  LDQSSVSHLFPVTKYLGLLATGMT-------------------ADSRSLVQQARNEAAEF 120

Query: 121 RFRYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFF 180
           RF+YGYEMP D+LAKWIADKSQVYTQHAYMRPLGVVAMVLGID+E GP LYKCDPAGHF+
Sbjct: 121 RFQYGYEMPADILAKWIADKSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFY 180

Query: 181 GHKATSAGLKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEV 237
           GHKATSAG+KEQEA+NFLEKKMK +PAFTY+ETVQTAISALQSVLQEDFKA EIEV
Sbjct: 181 GHKATSAGMKEQEAVNFLEKKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEV 217

[Close]

BLAST of Cp4.1LG12g09260 vs. TAIR 10
Match: AT1G16470.1 (proteasome subunit PAB1 )

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-33
Identity = 84/253 (33.20%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 9   YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTH 68
           Y   +T FSP G+L Q+E+A  AV S G TS+G+K  + V + T+KK+P  L+D+ SV  
Sbjct: 6   YSFSLTTFSPSGKLVQIEHALTAVGS-GQTSLGIKASNGVVIATEKKLPSILVDEASVQK 65

Query: 69  LFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEFRFRYGYEM 128
           +  +T  +G++ +G                   M  D R LV+++R +A ++   Y   +
Sbjct: 66  IQHLTPNIGVVYSG-------------------MGPDFRVLVRKSRKQAEQYLRLYKEPI 125

Query: 129 PVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFFGHKATSAG 188
           PV  L +  A   Q +TQ   +RP GV  +V G DD+ GP+LY+ DP+G +F  KA++ G
Sbjct: 126 PVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMG 185

Query: 189 LKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRVENPIFRV 248
                A  FLEK+   D     ++ + TAI  L+   + +  +  IE+G +  +  +FRV
Sbjct: 186 KNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADK-VFRV 234

Query: 249 LSTEEVDEHLTAI 262
           L+  E+D++L  +
Sbjct: 246 LTPAEIDDYLAEV 234

[Close]

BLAST of Cp4.1LG12g09260 vs. TAIR 10
Match: AT1G16470.2 (proteasome subunit PAB1 )

HSP 1 Score: 140.6 bits (353), Expect = 1.8e-33
Identity = 84/253 (33.20%), Postives = 137/253 (54.15%), Query Frame = 0


Query: 9   YDRHITIFSPEGRLFQVEYAFKAVKSAGITSIGVKGKDSVCVVTQKKVPDKLLDQTSVTH 68
           Y   +T FSP G+L Q+E+A  AV S G TS+G+K  + V + T+KK+P  L+D+ SV  
Sbjct: 6   YSFSLTTFSPSGKLVQIEHALTAVGS-GQTSLGIKASNGVVIATEKKLPSILVDEASVQK 65

Query: 69  LFSITKYLGLLATGITESTDGDDESVHIVRWQLMITDARSLVQQARNEAAEFRFRYGYEM 128
           +  +T  +G++ +G                   M  D R LV+++R +A ++   Y   +
Sbjct: 66  IQHLTPNIGVVYSG-------------------MGPDFRVLVRKSRKQAEQYLRLYKEPI 125

Query: 129 PVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEFGPRLYKCDPAGHFFGHKATSAG 188
           PV  L +  A   Q +TQ   +RP GV  +V G DD+ GP+LY+ DP+G +F  KA++ G
Sbjct: 126 PVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDK-GPQLYQVDPSGSYFSWKASAMG 185

Query: 189 LKEQEAINFLEKKMKNDPAFTYEETVQTAISALQSVLQEDFKANEIEVGVVRVENPIFRV 248
                A  FLEK+   D     ++ + TAI  L+   + +  +  IE+G +  +  +FRV
Sbjct: 186 KNVSNAKTFLEKRYTED--MELDDAIHTAILTLKEGFEGEISSKNIEIGKIGADK-VFRV 234

Query: 249 LSTEEVDEHLTAI 262
           L+  E+D++L  +
Sbjct: 246 LTPAEIDDYLAEV 234

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XG77	1.1e-123	84.53	Proteasome subunit alpha type-6 OS=Nicotiana tabacum OX=4097 GN=PAA1 PE=2 SV=1	[more]
O48551	1.9e-123	84.15	Proteasome subunit alpha type-6 OS=Glycine max OX=3847 GN=PAA1 PE=2 SV=2	[more]
O81147	4.3e-120	81.51	Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana OX=3702 GN=PAA2 PE=1 S...	[more]
O81146	7.3e-120	81.13	Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana OX=3702 GN=PAA1 PE=1 S...	[more]
Q9LSU3	4.9e-116	79.62	Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica OX=39947 GN=PAA1...	[more]

BLAST of Cp4.1LG12g09260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549157.1	5.07e-168	92.45	proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo]	[more]
XP_022953432.1	4.16e-167	92.08	proteasome subunit alpha type-6 [Cucurbita moschata] >XP_022992374.1 proteasome ...	[more]
XP_023000291.1	4.86e-166	90.94	proteasome subunit alpha type-6-like [Cucurbita maxima] >KAG6593559.1 Proteasome...	[more]
XP_022151687.1	9.80e-166	90.94	proteasome subunit alpha type-6-like [Momordica charantia]	[more]
XP_023515312.1	1.98e-165	90.57	proteasome subunit alpha type-6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG12g09260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JXD2	2.02e-167	92.08	Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111488701 PE=3 S...	[more]
A0A6J1GN74	2.02e-167	92.08	Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111455988 PE=3...	[more]
A0A6J1KFH2	2.35e-166	90.94	Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111494566 PE=3 S...	[more]
A0A6J1DE63	4.75e-166	90.94	Proteasome subunit alpha type OS=Momordica charantia OX=3673 GN=LOC111019600 PE=...	[more]
A0A5D3BY44	2.74e-165	90.57	Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Cp4.1LG12g09260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05840.1	3.1e-121	81.51	20S proteasome subunit PAA2	[more]
AT5G35590.1	5.2e-121	81.13	proteasome alpha subunit A1	[more]
AT2G05840.2	6.6e-108	82.20	20S proteasome subunit PAA2	[more]
AT1G16470.1	1.8e-33	33.20	proteasome subunit PAB1	[more]
AT1G16470.2	1.8e-33	33.20	proteasome subunit PAB1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000426	Proteasome alpha-subunit, N-terminal domain	SMART	SM00948	Proteasome_A_N_2	coord: 9..31 e-value: 1.1E-11 score: 54.8
IPR000426	Proteasome alpha-subunit, N-terminal domain	PFAM	PF10584	Proteasome_A_N	coord: 9..31 e-value: 3.3E-15 score: 55.4
IPR000426	Proteasome alpha-subunit, N-terminal domain	PROSITE	PS00388	PROTEASOME_ALPHA_1	coord: 9..31
IPR029055	Nucleophile aminohydrolases, N-terminal	GENE3D	3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	coord: 1..265 e-value: 3.3E-99 score: 333.2
IPR029055	Nucleophile aminohydrolases, N-terminal	SUPERFAMILY	56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	coord: 8..264
IPR001353	Proteasome, subunit alpha/beta	PFAM	PF00227	Proteasome	coord: 103..239 e-value: 1.1E-37 score: 129.4 coord: 35..84 e-value: 1.5E-7 score: 31.1
None	No IPR available	PANTHER	PTHR11599	PROTEASOME SUBUNIT ALPHA/BETA	coord: 102..262 coord: 1..85
None	No IPR available	PANTHER	PTHR11599:SF129	PROTEASOME SUBUNIT ALPHA TYPE-6	coord: 102..262
None	No IPR available	PANTHER	PTHR11599:SF129	PROTEASOME SUBUNIT ALPHA TYPE-6	coord: 1..85
IPR023332	Proteasome alpha-type subunit	PROSITE	PS51475	PROTEASOME_ALPHA_2	coord: 24..258 score: 73.888405
IPR034642	Proteasome subunit alpha6	CDD	cd03754	proteasome_alpha_type_6	coord: 8..239 e-value: 2.54237E-146 score: 406.235

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g09260.1	Cp4.1LG12g09260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051603	proteolysis involved in cellular protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0019773	proteasome core complex, alpha-subunit complex
cellular_component	GO:0005839	proteasome core complex