Cp4.1LG12g07340 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07340
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	PPPDE domain-containing protein
Location	Cp4.1LG12: 6995924 .. 6998418 (-)
RNA-Seq Expression	Cp4.1LG12g07340
Synteny	Cp4.1LG12g07340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGGGAGCCAGCTAAAAAGCTCTCAGTGGCATTTATGTAATTGGAGCCAAAAACCGAGCCCGATGGTATACCCTCACCAAACTAGGATCGTCCACGGTCCAGATCATTTCTACGGTGTTCAACAACGAGTCGCCGCCGGTGACGCCCGTTAGAATTAGAAACTAAGAAACAAGAGTTTCCGTTCTTCTCCACAGATTTTGAATTTCAAAATTTCCGTTTCTCGAGGACTTCACGCTACGTTTTATCGGTTCCGTCTTTTGAGAGTTCTTGGCCATGAATTGAGACGGAATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGGTCAGTAATGGTAGTAATTGCTTCCGTTTGATCTTCGTTTTCTAAGGCGTTTCCTGAGTTTTTTCTGTTTTCTCTTGGCCGAATCTCTATTGCTGCTTTTGCGTTTTTTTTTCTTATTTTTTTTTTGTGATCTTGCTAATTCGTTGATGCGATGTGATGCGATATGCGACATTCTTTTTTAATTTTGTGTTTGGATGGGAAGAAGATTTCAGTGACTGTTAACTGTGTGTACTGTGAATCGTGAGATGCATCGGGTGTGAGAAAATGTTCTGATTAGCCAAACGCTTTTCGTGAACTGCCAACTTGTTCTACGGCAAGTTTTCATCTCGATTCTGCATTTTTTTTCTATCAATTAGACTACCAAAAAGCTATCGAACTTCGAGCCCGATTAGGCAGAATTTTATTAAAAGGCATATACTCGTATCTGATTTCGCTACTATTTCCGGCTTTTCGTTTGAATGAACCAACTCGTTTCTTTATAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCGAACTCGATTTGACATTTCTTCTGTGGATTTCGATTGTAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGTAAGAAAGTACCTCTTTCTTTTTATTCATTCATGACCTGTTTAGCATATCAGATTCTCTTTTCCGTTTGTGCATTTCTACTGATTTCAAGTCCATTTAAGAGTTTCACATAATTTTCTGATGAACATGAACACGACCCAAATTGAGCTTTCCAGTTCATCATTTTTCTTGAAATGATCGTGGGTCGTGAGTTCATAAGTAAGTAATACATCTCCACTTGTATGATGGAGAGCCCAAAACAAAGTCATGGGAGCTTAGGCTCAAAATGGACAATATCATACCATTCGGGAGAGTCGTAATTCCTAACTGTTCTTTAGTAGTAAGATGATCTAGCTGAGATATTATTTGTTGAGACCGTTATAACAATTTTGATAGTTTTGTTGGATCCGAGAAAGTAACTGAAAAAGTATTTCGAATTTGTATCTAGTTTACGTGCCTACTTGGTTTTGTGCTGCACCATTTTGGATCAATTGGGCTGTTTCTTTTTTTCTGTTCATTTTTCAGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTGAATTCCACCAGAATCCGCCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTGACAAATGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCGGTTTGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGAGGAACAGACATGATTGGAACCTCAGCAGCTCCATTGGAAGTGCTGGAAGAAGGTGAGACAGTCACAATTCTTAGCTTTTCCTCTATAATATTCTTCTTTATGATCTTGGAAGATCAAATTCAAATCAGAAGCCATTGATTTGCATGCTTTCAATTCCCTTCATTTGCCTCTGAATTGTTTTCTTGTATTATTTCTACTTCTTGTAAAAGTTAATATCATTGTGAAGTTAAAATCACAATTCATACTCTCATAATTTAAACAAAGTGTGGACTTTTTGTTACTTGAAATTTAAGTAATCACAATCTTCTTGTCAAAGTGAAGAAAAAATCACTTGAGATGATTGGACAAGAAGTTACAATCATGGAGACATTTTATTATTTATTTTCTCTCTCTTTCTCTCTCTCTTTTATTTATTTATTTTTAGGTAGAAAATAA

mRNA sequence

TAGGGAGCCAGCTAAAAAGCTCTCAGTGGCATTTATGTAATTGGAGCCAAAAACCGAGCCCGATGGTATACCCTCACCAAACTAGGATCGTCCACGGTCCAGATCATTTCTACGGTGTTCAACAACGAGTCGCCGCCGGTGACGCCCGTTAGAATTAGAAACTAAGAAACAAGAGTTTCCGTTCTTCTCCACAGATTTTGAATTTCAAAATTTCCGTTTCTCGAGGACTTCACGCTACGTTTTATCGGTTCCGTCTTTTGAGAGTTCTTGGCCATGAATTGAGACGGAATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCGAACTCGATTTGACATTTCTTCTGTGGATTTCGATTGTAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTGAATTCCACCAGAATCCGCCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTGACAAATGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCGGTTTGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGAGGAACAGACATGATTGGAACCTCAGCAGCTCCATTGGAAGTGCTGGAAGAAGGTGAGACAGTCACAATTCTTAGCTTTTCCTCTATAATATTCTTCTTTATGATCTTGGAAGATCAAATTCAAATCAGAAGCCATTGATTTGCATGCTTTCAATTCCCTTCATTTGCCTCTGAATTGTTTTCTTGTATTATTTCTACTTCTTGTAAAAGTTAATATCATTGTGAAGTTAAAATCACAATTCATACTCTCATAATTTAAACAAAGTGTGGACTTTTTGTTACTTGAAATTTAAGTAATCACAATCTTCTTGTCAAAGTGAAGAAAAAATCACTTGAGATGATTGGACAAGAAGTTACAATCATGGAGACATTTTATTATTTATTTTCTCTCTCTTTCTCTCTCTCTTTTATTTATTTATTTTTAGGTAGAAAATAA

Coding sequence (CDS)

ATGATGTTGTTGTTTAAGAAACCAATCGAAGAACGCACCGGAGGATCCGTGCCGGTGTATCTGAATGTCTACGATCTAACCGCGATCAATGGCTACGCTTACTGGTTTGGCCTCGGCGTTTTCCATTCCGGAGTTCAAGTATGCGATTTCGTGGTCGATGTCGGTGGAGTTCTTATGCTCAATCTGGTAGATCTTTCAGTTAAATTTGTCGAACTCGATTTGACATTTCTTCTGTGGATTTCGATTGTAGTTCATGGTGTGGAATACGCATTTGGAGCTCACGAGCGCTCAACAACGGGAATTTTTGAAGGAGTGCCGAAGCAATGCGACGGATTTCGATTTAGGAAGACAGTTTTGGTAGGCAAAACAGATATGAAACCAACAGAGGTGAGAGCTTTAATGGATGAACTTGCCCAATCCTACAAGGGAAATGCTTACAATTTGATCACCAAAAACTGCAACCATTTTTGCAATGATGCTTGTGTTAAACTCACAGGGAATTCCATCCCAAACTGGGTTAATCGCCTTGCTAGAATTGGCTTTCTTTGCAATTGTGTTCTACCAGTGACCTTGAATTCCACCAGAATCCGCCACCACAACAGAATAGAAGACAAGGTTGTAACCATGGAAACAAAGAAGGAATTGACAAATGAATCAACAAAAACTCCCAGTTCTGATTCTACTTCATCTCCTTCCTCGGCGGTTTGCCGAGGAAGAACTCGGACGAGACGAGCTCCTCCTCCGTGTTCTCCATTGCCTTCTCATTCTTTATCCTCGTCTTCATGA

Protein sequence

MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRTRTRRAPPPCSPLPSHSLSSSS

Homology

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BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot
Match: Q93VG8 (DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-41
Identity = 75/179 (41.90%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 18  PVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDLTFL 77
           PVYLNVYDLT +N Y YWFG+G+FHSG++                               
Sbjct: 27  PVYLNVYDLTPVNNYLYWFGIGIFHSGIE------------------------------- 86

Query: 78  LWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALMDEL 137
                  H +EY +GAHE  T+G++E  P+ C GF FR++VL+G T M  ++ R+ M++L
Sbjct: 87  ------AHNLEYCYGAHEYPTSGVYEVEPRNCPGFIFRRSVLLGTTSMSRSDFRSYMEKL 146

Query: 138 AQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTLNSTRI 197
           ++ Y G+ Y+LI KNCNHF  + C++LTG  IP W+NRLAR+G  CNC+LP ++  T +
Sbjct: 147 SRKYHGDTYHLIAKNCNHFTEEVCLQLTGKPIPGWINRLARVGSFCNCLLPESIQLTAV 168

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot
Match: H2KZK4 (Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4.5 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 8.2e-23
Identity = 58/176 (32.95%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 19  VYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDLTFLL 78
           V LNVYD+  +N YA   G+G+FHSG++                                
Sbjct: 32  VRLNVYDMYWLNDYASNIGVGIFHSGIE-------------------------------- 91

Query: 79  WISIVVHGVEYAFGAHERSTTGIFEGVPKQC----DGFRFRKTVLVGKTDMKPTEVRALM 138
                V GVEYA+G H    +G+FE  P+      + F+F+++++VG+T+   +++R L+
Sbjct: 92  -----VFGVEYAYGGHPYQFSGVFENSPQDAEELGETFKFKESIVVGETERSTSDIRKLI 151

Query: 139 DELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLAR----IGFLCNCV 187
             L + ++G+ Y+LI++NCNHF      +LTG  IP W+NRLA     I FL  C+
Sbjct: 152 KSLGEDFRGDRYHLISRNCNHFSAVLARELTGKDIPGWINRLANLSGSIPFLEKCI 170

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot
Match: Q5PQ09 (Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 2.0e-21
Identity = 70/221 (31.67%), Postives = 104/221 (47.06%), Query Frame = 0


Query: 18  PVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDLTFL 77
           P+ LNVYD+  IN Y    G+GVFHSG+Q                               
Sbjct: 5   PIILNVYDMYWINEYTSSLGIGVFHSGIQ------------------------------- 64

Query: 78  LWISIVVHGVEYAFGAHERSTTGIFEGVPKQC----DGFRFRKTVLVGKTDMKPTEVRAL 137
                 V+G E+A+G H    +G+FE  P       D F+F++ + +G TD    ++  +
Sbjct: 65  ------VYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKI 124

Query: 138 MDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLAR----IGFLCNCVLPV 197
           ++EL + YKGNAY+L+ KNCNHF +     L G  IP WVNRLA     + FL +C+   
Sbjct: 125 IEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKE 180

Query: 198 TLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSS 231
            L    ++         ++ E + EL  E+    +S STS+
Sbjct: 185 WLTPAALQ-------SSISQELQDEL-EEAEDAAASASTST 180

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot
Match: Q5XIT6 (Deubiquitinase DESI2 OS=Rattus norvegicus OX=10116 GN=Desi2 PE=2 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.7e-21
Identity = 70/235 (29.79%), Postives = 109/235 (46.38%), Query Frame = 0


Query: 14  GGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELD 73
           G +  V LNVYD+  +N Y    G+GVFHSG++                           
Sbjct: 2   GANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIE--------------------------- 61

Query: 74  LTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQC----DGFRFRKTVLVGKTDMKPTE 133
                     V+G E+A+G H    +GIFE  P       + F+F++ V++G TD    +
Sbjct: 62  ----------VYGREFAYGGHPYPFSGIFEISPGNAAELGETFKFKEAVVLGSTDFLEDD 121

Query: 134 VRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLAR----IGFLCNC 193
           +  +++EL + YKGNAY+L+ KNCNHF +     L G  IP W+NRLA     I FL +C
Sbjct: 122 IEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSC 181

Query: 194 VLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 241
           +    L    ++               +EL +E  +   + ++++ +SA   GRT
Sbjct: 182 LPKEWLTPAALQ-----------SSVSQELQDELEEAEDAAASTAMASAAAGGRT 188

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot
Match: Q9D291 (Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.7e-20
Identity = 70/235 (29.79%), Postives = 108/235 (45.96%), Query Frame = 0


Query: 14  GGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELD 73
           G +  V LNVYD+  +N Y    G+GVFHSG++                           
Sbjct: 2   GANQLVVLNVYDMYWMNEYTSSIGIGVFHSGIE--------------------------- 61

Query: 74  LTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQC----DGFRFRKTVLVGKTDMKPTE 133
                     V+G E+A+G H    +GIFE  P       + F+F++ V++G TD    +
Sbjct: 62  ----------VYGREFAYGGHPYPFSGIFEISPGNASELGETFKFKEAVVLGSTDFLEDD 121

Query: 134 VRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLAR----IGFLCNC 193
           +  +++EL + YKGNAY+L+ KNCNHF +     L G  IP W+NRLA     I FL +C
Sbjct: 122 IEKIVEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWINRLAYFSSCIPFLQSC 181

Query: 194 VLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 241
           +    L    ++               +EL +E  +   + ++S+ +SA    RT
Sbjct: 182 LPKEWLTPAALQ-----------SSVSQELQDELEEAEDAAASSAMASAAAGART 188

[Close]

BLAST of Cp4.1LG12g07340 vs. NCBI nr
Match: KAG7014173.1 (DeSI-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 509 bits (1310), Expect = 1.43e-181
Identity = 257/261 (98.47%), Postives = 258/261 (98.85%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
           NLVDLSVKFV+LDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  NLVDLSVKFVKLDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVT NSTRIRHHNRIEDKVVTMETKKELT ESTKTPSSDSTSSPSSAV RGRT
Sbjct: 181 FLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTTESTKTPSSDSTSSPSSAVRRGRT 240

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 261

[Close]

BLAST of Cp4.1LG12g07340 vs. NCBI nr
Match: XP_023549100.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 435 bits (1118), Expect = 6.83e-153
Identity = 224/261 (85.82%), Postives = 224/261 (85.82%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT
Sbjct: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 224

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 224

[Close]

BLAST of Cp4.1LG12g07340 vs. NCBI nr
Match: XP_022954103.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita moschata] >KAG6575623.1 DeSI-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426 bits (1096), Expect = 1.54e-149
Identity = 221/261 (84.67%), Postives = 221/261 (84.67%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVT NSTRIRHHNRIEDKVVTMETKKELT ESTKTPSSDSTSSPSSAV RGRT
Sbjct: 181 FLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTTESTKTPSSDSTSSPSSAVRRGRT 224

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 224

[Close]

BLAST of Cp4.1LG12g07340 vs. NCBI nr
Match: XP_022991646.1 (deSI-like protein At4g17486 isoform X1 [Cucurbita maxima])

HSP 1 Score: 417 bits (1073), Expect = 4.92e-146
Identity = 216/260 (83.08%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEG+PKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGLPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVT NSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSS V RGRT
Sbjct: 181 FLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSMVRRGRT 223

Query: 241 RTRRAPPPCSPLPSHSLSSS 260
           +TRRAPPPCSPL SHS SSS
Sbjct: 241 QTRRAPPPCSPLSSHSSSSS 223

[Close]

BLAST of Cp4.1LG12g07340 vs. NCBI nr
Match: XP_023549101.1 (deSI-like protein At4g17486 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406 bits (1043), Expect = 1.33e-141
Identity = 215/261 (82.38%), Postives = 215/261 (82.38%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI 
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI- 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
                   VTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT
Sbjct: 181 --------VTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 215

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 215

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL
Match: A0A6J1GQ68 (deSI-like protein At4g17486 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456472 PE=3 SV=1)

HSP 1 Score: 426 bits (1096), Expect = 7.45e-150
Identity = 221/261 (84.67%), Postives = 221/261 (84.67%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVT NSTRIRHHNRIEDKVVTMETKKELT ESTKTPSSDSTSSPSSAV RGRT
Sbjct: 181 FLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTTESTKTPSSDSTSSPSSAVRRGRT 224

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 224

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL
Match: A0A6J1JRC0 (deSI-like protein At4g17486 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488202 PE=3 SV=1)

HSP 1 Score: 417 bits (1073), Expect = 2.38e-146
Identity = 216/260 (83.08%), Postives = 218/260 (83.85%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEG+PKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGLPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
           FLCNCVLPVT NSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSS V RGRT
Sbjct: 181 FLCNCVLPVTFNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSMVRRGRT 223

Query: 241 RTRRAPPPCSPLPSHSLSSS 260
           +TRRAPPPCSPL SHS SSS
Sbjct: 241 QTRRAPPPCSPLSSHSSSSS 223

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL
Match: A0A6J1GRX9 (deSI-like protein At4g17486 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456472 PE=3 SV=1)

HSP 1 Score: 397 bits (1021), Expect = 1.44e-138
Identity = 212/261 (81.23%), Postives = 212/261 (81.23%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI 
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI- 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
                   VT NSTRIRHHNRIEDKVVTMETKKELT ESTKTPSSDSTSSPSSAV RGRT
Sbjct: 181 --------VTFNSTRIRHHNRIEDKVVTMETKKELTTESTKTPSSDSTSSPSSAVRRGRT 215

Query: 241 RTRRAPPPCSPLPSHSLSSSS 261
           RTRRAPPPCSPLPSHSLSSSS
Sbjct: 241 RTRRAPPPCSPLPSHSLSSSS 215

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL
Match: A0A6J1JMF4 (deSI-like protein At4g17486 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488202 PE=3 SV=1)

HSP 1 Score: 389 bits (998), Expect = 4.60e-135
Identity = 207/260 (79.62%), Postives = 209/260 (80.38%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ              
Sbjct: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHERSTTGIFEG+PKQCDGFRFRKTVLV
Sbjct: 61  -----------------------VHGVEYAFGAHERSTTGIFEGLPKQCDGFRFRKTVLV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI 
Sbjct: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARI- 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRT 240
                   VT NSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSS V RGRT
Sbjct: 181 --------VTFNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSMVRRGRT 214

Query: 241 RTRRAPPPCSPLPSHSLSSS 260
           +TRRAPPPCSPL SHS SSS
Sbjct: 241 QTRRAPPPCSPLSSHSSSSS 214

[Close]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL
Match: A0A5A7UYX3 (DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001770 PE=3 SV=1)

HSP 1 Score: 377 bits (968), Expect = 2.71e-130
Identity = 199/265 (75.09%), Postives = 210/265 (79.25%), Query Frame = 0


Query: 1   MMLLFKKPIEERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 60
           M+ L KKPI + TGGSVPVYLNVYDLTAINGYAYW GLGVFHSGVQ              
Sbjct: 1   MVFLLKKPIGKTTGGSVPVYLNVYDLTAINGYAYWLGLGVFHSGVQ-------------- 60

Query: 61  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 120
                                  VHGVEYAFGAHE STTGIFEGVPKQCDGFRFRKT+LV
Sbjct: 61  -----------------------VHGVEYAFGAHEYSTTGIFEGVPKQCDGFRFRKTILV 120

Query: 121 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 180
           GKTDMKPTEVRALM+ELAQ YKGNAYNLITKNCNHFCNDAC+KLTGNSIPNWVNRLARIG
Sbjct: 121 GKTDMKPTEVRALMEELAQIYKGNAYNLITKNCNHFCNDACIKLTGNSIPNWVNRLARIG 180

Query: 181 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCR--- 240
           FLCNCVLPVTLNSTRIRHH RIEDKVVTMETKKELT+ESTKTPSS+S+SS SS+ C    
Sbjct: 181 FLCNCVLPVTLNSTRIRHHQRIEDKVVTMETKKELTSESTKTPSSNSSSSASSSPCLTFR 228

Query: 241 -GRTRTRRAPPPCSPLPSHSLSSSS 261
            GR++TRRAPPP SPL SHS SSSS
Sbjct: 241 PGRSQTRRAPPPSSPLFSHSSSSSS 228

[Close]

BLAST of Cp4.1LG12g07340 vs. TAIR 10
Match: AT1G80690.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 251.1 bits (640), Expect = 9.5e-67
Identity = 141/256 (55.08%), Postives = 174/256 (67.97%), Query Frame = 0


Query: 15  GSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDL 74
           G+VPVYLNVYDLT INGYAYW GLGV+HSGV+                            
Sbjct: 13  GNVPVYLNVYDLTPINGYAYWLGLGVYHSGVE---------------------------- 72

Query: 75  TFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALM 134
                    VHG+EYA+GAHE  +TGIFEG PKQC+GF FRK++L+GKTD+ P EVRA M
Sbjct: 73  ---------VHGIEYAYGAHEYPSTGIFEGEPKQCEGFTFRKSILIGKTDLGPLEVRATM 132

Query: 135 DELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTLNST 194
           ++LA +YKG++YNLITKNCNHFC++ C+KLTGN IP+WVNRLARIGF+CNCVLP T+N+T
Sbjct: 133 EQLADNYKGSSYNLITKNCNHFCDETCIKLTGNPIPSWVNRLARIGFMCNCVLPATINAT 192

Query: 195 RIRHHNRIEDKVVTMET-KKELTNESTK------TPSSDSTSSPSSAVCRGRTRTR--RA 254
           R  ++   +DK    E  KK+LT+ S++      TPSS S+SSPS  V RGR+R R  RA
Sbjct: 193 RFGNNRVNQDKSCEAENEKKKLTSVSSRERSTIATPSS-SSSSPSVQV-RGRSRKRRPRA 226

Query: 255 PPPCSPLPSHSLSSSS 262
             P SPL   +L SSS
Sbjct: 253 LQPSSPL---TLGSSS 226

[Close]

BLAST of Cp4.1LG12g07340 vs. TAIR 10
Match: AT5G25170.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 232.6 bits (592), Expect = 3.5e-61
Identity = 123/240 (51.25%), Postives = 148/240 (61.67%), Query Frame = 0


Query: 15  GSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDL 74
           GSVPVYLNVYDLT INGYAYW GLG++HSGV+                            
Sbjct: 16  GSVPVYLNVYDLTPINGYAYWLGLGIYHSGVE---------------------------- 75

Query: 75  TFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALM 134
                    VHGVEY FGAH+ STTGIFE  PKQC GF FRK++L+G+TD+ P  VR  M
Sbjct: 76  ---------VHGVEYGFGAHDHSTTGIFEVEPKQCPGFTFRKSILIGRTDLDPENVRVFM 135

Query: 135 DELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTLNST 194
           ++LA+ Y GN+Y+LITKNCNHFCND CV+LT  SIP+WVNRLAR G  CNCVLP  LN T
Sbjct: 136 EKLAEEYSGNSYHLITKNCNHFCNDVCVQLTRRSIPSWVNRLARFGLFCNCVLPAELNET 195

Query: 195 RIRHHNRIEDKVVTMETKKELTNESTKTPSSDSTSSPSSAVCRGRTRTRRAPPPCSPLPS 254
           ++R     E+K+  +E KK+L + S++ P   S SS  S     R   RR   P SP  S
Sbjct: 196 KVRQVRSKEEKIPEVE-KKKLRSRSSRFPPGPSLSSSGSLNRSRRGERRRQCLPPSPTVS 217

[Close]

BLAST of Cp4.1LG12g07340 vs. TAIR 10
Match: AT2G25190.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.1e-57
Identity = 127/264 (48.11%), Postives = 158/264 (59.85%), Query Frame = 0


Query: 2   MLLFKKPIE-ERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLML 61
           ML FK  ++ ++  GSVPVYLNVYDLT +N Y YW GLGVFHSGV+              
Sbjct: 1   MLCFKGSVKRKKQSGSVPVYLNVYDLTPMNAYGYWLGLGVFHSGVE-------------- 60

Query: 62  NLVDLSVKFVELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLV 121
                                  VHGVEYAFGAHE S+TGIFE  PK+C GF FRK++LV
Sbjct: 61  -----------------------VHGVEYAFGAHESSSTGIFEVEPKKCPGFTFRKSILV 120

Query: 122 GKTDMKPTEVRALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIG 181
           GKTD+   EVR  M++LA+ Y+GN Y+LIT+NCNHFCN+ C+KL   SIP WVNRLAR+G
Sbjct: 121 GKTDLVAKEVRVFMEKLAEEYQGNKYHLITRNCNHFCNEVCLKLAQKSIPRWVNRLARLG 180

Query: 182 FLCNCVLPVTLNSTRIRHHNRIEDKVVTMETKKELTNESTKTP---SSDSTSSPSSAVCR 241
            LCNCVLP  LN  ++R   R+    ++   KK+L N S   P   SS S+S+P +   R
Sbjct: 181 VLCNCVLPPRLNEAKVR---RVGKGELSESEKKKLRNRSRSDPLLSSSPSSSTPDNH--R 218

Query: 242 GRTRTRRAPPPCSPLPSHSLSSSS 262
              R + +       PS S SSSS
Sbjct: 241 SHIRAKSS----GNHPSSSSSSSS 218

[Close]

BLAST of Cp4.1LG12g07340 vs. TAIR 10
Match: AT4G31980.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink). )

HSP 1 Score: 204.5 bits (519), Expect = 1.0e-52
Identity = 110/250 (44.00%), Postives = 148/250 (59.20%), Query Frame = 0


Query: 11  ERTGGSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFV 70
           ++  G+VPVYLNVYDLT +N Y YW G+G++HSG++                        
Sbjct: 11  KKNSGTVPVYLNVYDLTPMNVYGYWLGIGIYHSGLE------------------------ 70

Query: 71  ELDLTFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEV 130
                        VHGVEY +GAHE+S++GIFE  PK+C GF FRK++LVG+T+MK  EV
Sbjct: 71  -------------VHGVEYGYGAHEKSSSGIFEVEPKKCPGFTFRKSILVGETEMKAKEV 130

Query: 131 RALMDELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVT 190
           R+ M++L++ Y+GN Y+LIT+NCNHFCN   +KLT  SIP+WVNRLAR+GFLCNCVLP  
Sbjct: 131 RSFMEKLSEEYQGNKYHLITRNCNHFCNHVSLKLTHKSIPSWVNRLARLGFLCNCVLPAC 190

Query: 191 LNSTRIRHHNRIEDKVVTME-TKKELTNESTKTPSSDSTSSPSSAVCRGRTRTRR----- 250
           LN T+++   +    ++  E TKK+   +  +   S   SS SS      T T       
Sbjct: 191 LNETKVKRVGKDGKLLLEGENTKKKKRKKKIRRSRSGPLSSSSSNARLDNTPTHNRSIST 223

Query: 251 APPPCSPLPS 255
             PP S  PS
Sbjct: 251 GNPPLSASPS 223

[Close]

BLAST of Cp4.1LG12g07340 vs. TAIR 10
Match: AT1G47740.1 (PPPDE putative thiol peptidase family protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.1e-51
Identity = 92/184 (50.00%), Postives = 117/184 (63.59%), Query Frame = 0


Query: 15  GSVPVYLNVYDLTAINGYAYWFGLGVFHSGVQVCDFVVDVGGVLMLNLVDLSVKFVELDL 74
           G  PVYLNVYDLT INGY YW GLG+FHSGV+                            
Sbjct: 67  GRAPVYLNVYDLTPINGYIYWAGLGIFHSGVE---------------------------- 126

Query: 75  TFLLWISIVVHGVEYAFGAHERSTTGIFEGVPKQCDGFRFRKTVLVGKTDMKPTEVRALM 134
                    VHGVEYAFGAH+ +T+G+FE  P+QC GF+F+K++ +G T++ PT+VR  M
Sbjct: 127 ---------VHGVEYAFGAHDYATSGVFEVEPRQCPGFKFKKSIFIGTTNLNPTQVREFM 186

Query: 135 DELAQSYKGNAYNLITKNCNHFCNDACVKLTGNSIPNWVNRLARIGFLCNCVLPVTLNST 194
           +++A SY GN Y+LI KNCNHFC D C KLTG  IP WVNRLA+IG +C+C+LP +L  T
Sbjct: 187 EDMACSYYGNMYHLIVKNCNHFCQDVCYKLTGKKIPKWVNRLAQIGSVCSCILPESLKIT 213

Query: 195 RIRH 199
            + H
Sbjct: 247 AVCH 213

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93VG8	1.3e-41	41.90	DeSI-like protein At4g17486 OS=Arabidopsis thaliana OX=3702 GN=At4g17486 PE=2 SV...	[more]
H2KZK4	8.2e-23	32.95	Desumoylating isopeptidase 1 homolog OS=Caenorhabditis elegans OX=6239 GN=F36D4....	[more]
Q5PQ09	2.0e-21	31.67	Deubiquitinase DESI2 OS=Xenopus laevis OX=8355 GN=desi2 PE=2 SV=1	[more]
Q5XIT6	7.7e-21	29.79	Deubiquitinase DESI2 OS=Rattus norvegicus OX=10116 GN=Desi2 PE=2 SV=1	[more]
Q9D291	1.7e-20	29.79	Deubiquitinase DESI2 OS=Mus musculus OX=10090 GN=Desi2 PE=1 SV=1	[more]

BLAST of Cp4.1LG12g07340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014173.1	1.43e-181	98.47	DeSI-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023549100.1	6.83e-153	85.82	deSI-like protein At4g17486 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022954103.1	1.54e-149	84.67	deSI-like protein At4g17486 isoform X1 [Cucurbita moschata] >KAG6575623.1 DeSI-l...	[more]
XP_022991646.1	4.92e-146	83.08	deSI-like protein At4g17486 isoform X1 [Cucurbita maxima]	[more]
XP_023549101.1	1.33e-141	82.38	deSI-like protein At4g17486 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG12g07340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQ68	7.45e-150	84.67	deSI-like protein At4g17486 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JRC0	2.38e-146	83.08	deSI-like protein At4g17486 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1114882...	[more]
A0A6J1GRX9	1.44e-138	81.23	deSI-like protein At4g17486 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1JMF4	4.60e-135	79.62	deSI-like protein At4g17486 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1114882...	[more]
A0A5A7UYX3	2.71e-130	75.09	DeSI-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00...	[more]

BLAST of Cp4.1LG12g07340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80690.1	9.5e-67	55.08	PPPDE putative thiol peptidase family protein	[more]
AT5G25170.1	3.5e-61	51.25	PPPDE putative thiol peptidase family protein	[more]
AT2G25190.1	3.1e-57	48.11	PPPDE putative thiol peptidase family protein	[more]
AT4G31980.1	1.0e-52	44.00	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247,...	[more]
AT1G47740.1	1.1e-51	50.00	PPPDE putative thiol peptidase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008580	PPPDE peptidase domain	SMART	SM01179	DUF862_2a	coord: 17..192 e-value: 2.9E-43 score: 159.7
IPR008580	PPPDE peptidase domain	PFAM	PF05903	Peptidase_C97	coord: 18..188 e-value: 1.7E-40 score: 138.3
IPR008580	PPPDE peptidase domain	PANTHER	PTHR12378	DESUMOYLATING ISOPEPTIDASE	coord: 6..258
IPR008580	PPPDE peptidase domain	PROSITE	PS51858	PPPDE	coord: 17..191 score: 48.37133
IPR042266	PPPDE peptidase domain superfamily	GENE3D	3.90.1720.30	PPPDE domains	coord: 58..209 e-value: 1.8E-34 score: 120.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..237
None	No IPR available	PANTHER	PTHR12378:SF52	F23A5.4 PROTEIN	coord: 6..258

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07340.1	Cp4.1LG12g07340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0101005	deubiquitinase activity
molecular_function	GO:0008233	peptidase activity