Cp4.1LG12g07280 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07280
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Photosynthetic NDH subunit of subcomplex B 1
Location	Cp4.1LG12: 7020793 .. 7028561 (+)
RNA-Seq Expression	Cp4.1LG12g07280
Synteny	Cp4.1LG12g07280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGTTAGGTGAGTGGTTAAAGTGCAGCGAACACTTTCCTTATAAAATGGTACCAAAACTTCCGTGTTGTTCGCTGTATTCCAATAGAAACTTGGAGATTCTTCCTTCTCATTTTCTCTCTGTTTCACCAAACCATTTCCACTTACTCTCTCTCTTTACGGAACTATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGGTTTGATCTTGATTTTAACCTAATTTTTATTTCCATATCGAAATCGTCGAATAGTGAAATGTCGATGAAATCTGCGGAAGTGATTCTGGAATGGATCTGGATTATTAGGAGTTTTTGTTTCTGTGATTTTTGAGATTTACAGAGGATCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGTGATTTGCTCTTCTCATTCTTTTTCTTTTTTCCTTTTTTTGTTAAGTTCCCGGGAAAATTAAAATTTGGATGAAAATGGTACGAGAGAATCGAAGAATATATTGTTTCTTTTTATTGCATGCGTGTATCATCTTCATTAATGGTTGGGCCCCACTTGAAATTTGAGTCATCACTGGGACCCACTAAATCCACGTCATACCATCATCACATACACGTCATGTCATACACACATTGTATTGGATTTGAGTAGCCTAAAATTATTATTATTTTTAATTTAATTTAATTTTTTCATCTACATAATATTAATTATTTCAAGATGAAAAATTAAAAGTTTAAAATAATAATGTGATAAAAAAAATATTTTCGTGTTTGATATTATTACGTAAAAAAAAAAGGAAAATTCTATTCTTTAAATTTAAAAATTACACGAGAAGATAAAAGAAGTTGCACAGTTGGCAAGACGTAAATTTTCTCTTTTTATTATTTACTATATAGCTCTTTTTATTATTTATATAAAAAGCTATTTTACGAGACAGTATTATTTAATTATAAATCCATGATTACTATATAGCTCTTTTATTATGTATATAATATTTTTTATTATAAATCTAAGATTATTCTCTAAATTAGCGGACGTGAGATTTTCATCCACGTCTCCCCCTTAATCGAGGCTCACAATACTTTTGTTCAACGTTTGAGAATTTTATTGACATGACTAAGTTTAGGGCATAACTCTGATACCATGTTAGATGAACACGACTCTTCACAATGGAATGATATTGTCCACTTTGAACATAAGCTATCATGACTTTGCTTCGGACTTCTCCGAAAGGCCTCGTAACAATGGAGATAGTATTCATTGATTATAAACGCATGATCGATTATAAACTCATGTTCATTCCCTAAATTAGCAGTTAGACCTTCTTTCAACAACCGAGTAAAACCATTACATTTTTTCATAAAGGAAGTCTTGATGAAATGAGACCATTTTTTAAAGCTGATTAACAACATTATTATTATAGAATGCTCATTGATAATATTTGTTAGTAGGTTCATTAAATTTTAGTTAGGCTTTGGGAAGGTAACAGAAATGGCGGTTGTGGTATTGCTAAACTTTTGCAGGAGCAAATGGTGGAACCGGCGGTCAATGGCACGAAGAATGTTATAATCGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAGCCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGGTTTAATAATTCCCTAATACATATGTCCAATTGGAGTGTTTTTGTTTTTGCCCACAAAATTTTGAGGTGAAACATGAAAATTTGGGGATTTGCAGAATTGGTATTGCTATGGAAAAGCTGTCGCAGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCACTTGCACATATCCTCGTGTACGAGAACCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCATAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTATTCCCACCAAGTAAGTTCTTGTCCTTCTAACCTCTCCATTTTTATTAACTCAAGTATCTATTTAGTCTCCATGCCTGCAACGTTACTAATTAGTTCTAAATTCATTATATGTTCCGGTGGGATCCCACACGTCTGTTAGGAGGAGAACGAATCATTATTTATAAAAATGTGTACATCTTTCTCTAGCAAATGTGTTTTAAAAATCTTGTGTAAAAATTCGAAAAGAAAAATTAAAAAAGACAATATTTACGACTCAAGTCGTTAAGTCAAAATTAATTCACCAAATGGGTTTGAAATAATAAATTGAAAGGATTTGAGTGAGGTGTAGTAGGTGTACCAACTCTGAATAGTTGATCAATGATAGAAGCGGCTAACCTTAACTTGTAAAAGAATGGATGGACCAGAAGTGGCCATTTACCAACCAAGAATATTGAAATATGCTTGTGGAGCTGAAAGCTTCTCACCAAACCCCATCCTTTGTGATCCTTATCACTTATTGTTGGAATGACCCAATTATTCATCACGGTGACCATGATGAACACTTACCACTGCTCATGATTTTAAAATGCGTTTAATAGGAAGAGGGTTTCCACACCTTTTATAACGAATGCTTTGTTCTCATTTCCAACTGACATGAGATCTGATACTTATGGGATTTGTGCCACCATTCAAACACTTTCATCATATTTAGTTCCAAGAACGTTCTTAAGTGTCTGAGAAGCACTCGTAATAGTGTTTCAGAGGGACCTATGAGTTAAGTTATTATGTATATTTATGATTTAGGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGGTCATCTCACGATCCCCACTTCTACCCAACCAGCAGACTCCATTCGAATTCAATCTTAAATCATAGTGTTATAGAACTGAATGCATTGGTTTGGGTACTAAATGCATCGCAATATGTATAAGCTCTTTAAGCTTTGAATGTTTTCCCCACGTTGTTCCTATACTTTAAACAACGTGAATGCATGTAAGTTTCTCTTTAAAAGTGTATGTGATTGATTTTTGCAGTCATGACTTTGATATTTATCTATCAAGTAATTTTGACTGTATTTTATCAAGTTTGGTGGCGTGCTCCTTTGTCCTTTCGCTGAATCGGTTAGTGGTCTACTAGAGAGGTCGTGATAATATCATCTACTGTCTATACCACTTCTTGTGGAGTAGATCGTGCATCCAACCAAGTCTTTGATCAGGGAAATAAGAGAATTCCACTATCGTCGATAGGCCAACTGGGTTACACCTAACGAAATAGGCTTCCTAAAAAGTCAACTCGAAGATGAAGTCGACATAAAATGAAGAACTCCGTTCTTCGAAACCTAGCTATCTTGTCTTTAAATGTATTTTTTTAAAAAAATTACTTCAAAAATATATATAGAGGTTTTTTAACGTTTTAAAGTTTAGCGGGAGAGGTAGGCTTATCCAAATCCAAACCTTCCTTCCACACATTTTGAAGATCATATTGCCTTAACGTTATGGAATCTCAATCCAATCCTCCCAAAAAACCAACTCCCAAGAACCATCCATGGCTACTTCTTCTCTTCCCACCAAATCCCTCCCGCCATTTTTGCCGGCATCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACTAAGCCGCCATTCCTAGCCCCACCTGACATTTCTCTCTCCACCTCTTCCTCATCGCCCTGTAAACTTCATATTCCCAGTTGTGCCAAGAAGAATCCCTGGCTCGACCCTTTCGACGATGGCGATGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCACCGGACAACCCGAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTTGCATCTCTAGGTCTTAAACTTCGGGGAGATGTACGGCGGTGCTGCTGCGTGATTTCCGGCGGGGTGTATGAAAATCTACTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGTAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCGGCCGATTACACTGACATGGTTGGATTGCTCAAGGTTGGTTCATTTTCTCGCCAATAATTGACCTAGAAATTGATAGAACAATATTGATAGTGATTCTACCATGTATGAAAGACTTCAAATATTGGATCCCACTTCGATTTAGAGGAGAATAGATAGGAGTCATGATACTACCACTTCCATTTAGAACTTCGATGATACTTAGAAACTTTGATAGCCATATTAGTGATTTGTTTGGAGATCTCTTAGAAAAATATTTAGTGCCCATTTGAAACAATGGTTTCATTGTTGTTGCAGGGTAGATATTATGATATGGTCTTGTCAACAAAGCTAGCTGGGTTTGGGCATGCAGCGTTTTTGTTCATGACAACAGCTAGAGACAGAGTTAGCTACATTTACCCTGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTCAAACATTTAAACCAGATAGCTCTAATCTTTCCGAGGGAGGGTTCAATATGTGAGAATATTTTATACTTTTGTTTTGAATCTGTACAAAAGTTTTCATATAAGCTTTTGAGTTTAGTATTAGTTTGACATAGCATTGGAGTGGGAGCTACTTTACGTAACGGTCCAAACTCACCGCTAATAGATATTATCCTTTTTGAGTTTTCCCTCAAAGTTTTTCAAACGCGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAAGAATGTTTTGTTCTCCTCCTCAACTGATGTGGGATCTCAAAATTCATCCCCCTTCGGGGCCAAGCATCCTCATTGGCACTCGTTCCCTTCTCCAATCGATGTGGAACCCCCAAATCCACACCCCCTTCGGGCTAGTGTCCTTGTTGGCACACCGCCTCGTGTCCATCCTCTTTCAGGACTCAGCCTCCTCGCTGGCACACCGCCTGGTATTTGGCTTTGATATCATTTGTAACGGCCCAAGCCGCCGCTAGTAGATATTACCCCTTTGGGTTTTCCCTTCCAGGTCTCCCCTCAAAGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACCCTTATCAAGAATGTTTCGTTCTCCTCTCCAATCGATGTGGGATCTCACACTTTATCTGTTTAAGTTCTTAGCAATCTTGTTTGCTTTTCAGTTTATATCGATAGTCACTCGTTGCGTTCTTGTGCTTATTTCCTAAGCCACAAGGAGGATGTCAAGAATGTATATAAAAGATTACATACTCCATAACTCATCAATATAAGTTTTTACTGTTTAGTATTAGTTTGATATAGGGTGCAGTTTTTGCCACTAAATGAGTGAAGTATGGCTTTTATCAGAGGACACTAAGTAATTTCTACGTGAAAGCTGAAGAACAAAATAGAAATAGCAAGCTCAAACTTCTACTTTTTTGATGCCTTGAAGGCTGATTTTCATGATTTAGGTATCATCAAATGGTTGATTGGTTAGGGAGACCATTTCGTAGCGTTCCCAGGCATCTCGTTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGATTGTAAAGGAAAAGTATAATCAAGCAGGTGTTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGTAGGTATTATGTCAATATCTTGCTTTATCAGAAAAAAATGATGAACTATAGGCAAAAGTAACATAATGCAGCTTTTTCTTTCACTATTTTCTGATGATAACACTTATTGAATCTAAATACAGGGGATTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGGGAAAACGTCGAGGAGGAGGTCGGAGATAACGCGAGCATCGTATTTATCACTACCCCAGGACAGGTACTCATAACTATCCATCTTTCTCTTTGAGTATAGAAGAGTGAACTGTGAAAAGGATGAAAAAACAGTTTTAAGTAAGAAAGCAAGGATTGAAGAAAGGGAAATTAATGTTTTGAAGAAGTTGATAAATGTGAGATCTCACATTGGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACGTCTACGACGTGTTTTAAAACTGTGAGGGAAAGCCCAAAGAGGATAATATGTACTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCCAAGCATCGAATGGTGTGCTAGTGAGGACGTTGGGCCCCGCAAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAGGGGAATGAAACATTTCTTATAGGGTGTGGAAACCTCTCCTTAGTAGACGTGTTTTAAAAACCTTGAGGGAAAGCCTAAAGAGGATAATATCTGTTAGCGGTGGGCTTTGGCTATTACAAATGGTATCATAGCTAGGCACCAAACGGTGTGCCAGCAAGGATGCTAGGCCTGCTGGGGGTGGGTTGTGAGATCTCACATTTGTTGGAGAGGGGAACGAAACATTCCTTGTAAAGGTGTGGAAACCTCTCTCTAATAGACATATTTTAAAACTTTGAGAGAGCCTAAAAAATGATAATATTTGCTAGCGGTAGGCTTTGGGCTATTACAAATGGTACCAGAGCCAAGCATCGAACAGTGTACCATCGAGGATGCTGGGCCTCGTAGGGAGTGGATTATGAGATCCCACATTGGTTGGAGAAGCATTCCTTATAAAAGTGTGGAAACCTCTCTCTAGTAGACGCGTTTTAAAACCTTAAGAGAAAGCTCAAGAGATAATATCTGCTAGCTGTGAGCTTGGGCTGTTACAATAAAAGTGAAGTACTTAAAAGCACATCATTCTTAACTTCAATCTGCAGTTAGCTGCTCTCATTAACGACTCGGCCGGTGTAATAGCTACCAACACAGCTGCGATCCAACTCGCCATTGCTCGCGAAAAACCGAGGTCTTGATCTGTTTCTCCTTCACAGAAACTCAGTAGTTTGCTTATTGATCTTAAAATCTCCCATTTGCTAGTAGTACGAAAATAACAGTGCTATGCATCTATAATGCCTATGTGTTTGCAGCATTGCATTGTTTTGCTCTGAAGAGAAAGCAAAACTATTTGTTCCGGAAGCCGAAGCAAAGAGATGCATTGCAGTTTCATCGACAACGGGACGACTAATCGACATCGATATGGGCACAGTTAAAAGGGCGATACAGAGCTTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA

mRNA sequence

ATGGAGAAACTTGGAGATTCTTCCTTCTCATTTTCTCTCTGTTTCACCAAACCATTTCCACTTACTCTCTCTCTTTACGGAACTATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTCAATGGCACGAAGAATGTTATAATCGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAGCCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCTGTCGCAGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCACTTGCACATATCCTCGTGTACGAGAACCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCATAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTATTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGAACCATCCATGGCTACTTCTTCTCTTCCCACCAAATCCCTCCCGCCATTTTTGCCGGCATCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACTAAGCCGCCATTCCTAGCCCCACCTGACATTTCTCTCTCCACCTCTTCCTCATCGCCCTGTAAACTTCATATTCCCAGTTGTGCCAAGAAGAATCCCTGGCTCGACCCTTTCGACGATGGCGATGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCACCGGACAACCCGAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTTGCATCTCTAGGTCTTAAACTTCGGGGAGATGTACGGCGGTGCTGCTGCGTGATTTCCGGCGGGGTGTATGAAAATCTACTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGTAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCGGCCGATTACACTGACATGGTTGGATTGCTCAAGCTAGCTGGGTTTGGGCATGCAGCGTTTTTGTTCATGACAACAGCTAGAGACAGAGTTAGCTACATTTACCCTGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTCAAACATTTAAACCAGATAGCTCTAATCTTTCCGAGGGAGGGTTCAATATGTATCATCAAATGGTTGATTGGTTAGGGAGACCATTTCGTAGCGTTCCCAGGCATCTCGTTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGATTGTAAAGGAAAAGTATAATCAAGCAGGTGTTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGGGAAAACGTCGAGGAGGAGGTCGGAGATAACGCGAGCATCGTATTTATCACTACCCCAGGACAGCTACCAACACAGCTGCGATCCAACTCGCCATTGCTCGCGAAAAACCGAGAGAAAGCAAAACTATTTGTTCCGGAAGCCGAAGCAAAGAGATGCATTGCAGTTTCATCGACAACGGGACGACTAATCGACATCGATATGGGCACAGTTAAAAGGGCGATACAGAGCTTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA

Coding sequence (CDS)

ATGGAGAAACTTGGAGATTCTTCCTTCTCATTTTCTCTCTGTTTCACCAAACCATTTCCACTTACTCTCTCTCTTTACGGAACTATGCCGGTCGACGGTTCTTCAACCACCGCCCCCACCGTCTGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATAGTTAAGCTTCTTCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACGGCCATTTGAAAGAATTTGAAGGCGCGGCGGAGCGATTCAGTTTGTATAAAGCCGATCTTCTCGATTTCGAGAGCCTTAGGGCGGCGATTAACGGATGCGATGGCGTTTTCCACACGGCGTCGCCTGTAACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTCAATGGCACGAAGAATGTTATAATCGCGGCGGCCGAAGCCAAAGTCCGTCGCGTGGTTTTCACTTCGTCGATTGGTGCAGTCTACATGGACCCCAGCCGTGGTCCAGACGAGATCGTAGACGAGTCCTGCTGGAGCGATCTAGAGTTCTGCAAGAACACCAAGAATTGGTATTGCTATGGAAAAGCTGTCGCAGAGCAGGCGGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGACTTGGTGGTGGTGAATCCGGTGCTGGTGCTGGGCCCACTGTTGCAACCCACCATTAATGCCAGCATTATCCACATACTCAAGTACTTGACTGGATCAGCTAAGACGTACGCCAATTCCGTTCAGGCGTACGTCCACGTGAAGGATGTTGCACTTGCACATATCCTCGTGTACGAGAACCCCTCCGCCTCCGGCCGGTACCTCTGCGCCGAGAGTGTTCTCCATAGAGGGGAGATCGTTGAGATTCTTGCCAAATTGTTCCCGGAATACCCTATTCCCACCAAGTGCTCAGATGAAGTGAACCCAAGGAAGAAGGCATACAAATTCTCAAACCAGAAGCTGAAGGACTTAGGATTGGAGTTCACTCCAGTGAAGCAGTGTCTATATGAAACCGTTAAGAACTTACAGGAGAAAGAACCATCCATGGCTACTTCTTCTCTTCCCACCAAATCCCTCCCGCCATTTTTGCCGGCATCAAGCTTTCCACCTTCTTCTCCTTCAACCCACTTCACTAAGCCGCCATTCCTAGCCCCACCTGACATTTCTCTCTCCACCTCTTCCTCATCGCCCTGTAAACTTCATATTCCCAGTTGTGCCAAGAAGAATCCCTGGCTCGACCCTTTCGACGATGGCGATGATCCGGACATGGAATACGGCTCTCTCTTCGCCGACGGGAAGCAGGAAGAGGACCCTCGCCCACCGGACAACCCGAACAATCCGTATGGGTTCTTGAAATTTCCTCAGGGTTACATGGTGGAAGTTGCATCTCTAGGTCTTAAACTTCGGGGAGATGTACGGCGGTGCTGCTGCGTGATTTCCGGCGGGGTGTATGAAAATCTACTCTTCTTTCCGGCGATTCAATTGCTCAAGGATCGGTACCCGGGTGTTCAAATCGACGTGGTGGCTTCGGCGAGGGGTAAACAGACTTATGAATTGAATAAGAATGTGCGATGGTCTAATGTCTATGATCCGGATGATTATTTTCCTGAACCGGCCGATTACACTGACATGGTTGGATTGCTCAAGCTAGCTGGGTTTGGGCATGCAGCGTTTTTGTTCATGACAACAGCTAGAGACAGAGTTAGCTACATTTACCCTGATGTGAATGCTGCTGGAGCAGGGCTTTTCTTGTCTCAAACATTTAAACCAGATAGCTCTAATCTTTCCGAGGGAGGGTTCAATATGTATCATCAAATGGTTGATTGGTTAGGGAGACCATTTCGTAGCGTTCCCAGGCATCTCGTTCCTCCGCTCAAAGTTTCGATTTCAAGAAAATTGAAGGAGATTGTAAAGGAAAAGTATAATCAAGCAGGTGTTGAGAAAGGAAAATATATTGTGATTCATGGAATAGAATCAGATTCAAAAGCCTCAATGCAGTCCAAAGGTGATACTGATAGCTTGCTACCCATTCAAGCCTGGGCTGAAATAGCCAATGCTATAAGGGGATTCAAGCCAGTTTTTGTCATTCCACACGAAAAAGAAAGGGAAAACGTCGAGGAGGAGGTCGGAGATAACGCGAGCATCGTATTTATCACTACCCCAGGACAGCTACCAACACAGCTGCGATCCAACTCGCCATTGCTCGCGAAAAACCGAGAGAAAGCAAAACTATTTGTTCCGGAAGCCGAAGCAAAGAGATGCATTGCAGTTTCATCGACAACGGGACGACTAATCGACATCGATATGGGCACAGTTAAAAGGGCGATACAGAGCTTTGAAGTGCCTCTAGCTCTTGCTTTTCAGTGA

Protein sequence

MEKLGDSSFSFSLCFTKPFPLTLSLYGTMPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYETVKNLQEKEPSMATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKKNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKLRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFPEPADYTDMVGLLKLAGFGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIVKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKNREKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ

Homology

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot
Match: Q9S9N6 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSB1 PE=2 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 1.6e-162
Identity = 297/461 (64.43%), Postives = 349/461 (75.70%), Query Frame = 0


Query: 367 ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPCKLHIPSCAKKNPWLDPFD 426
           ASS P  P   S  F  PPF  + P + L+     TS SS   +++    K NPWLDPFD
Sbjct: 2   ASSLPLLPKPISPFFKTPPFSTSKPLVFLNFQTRLTSRSSDVSVNLKK--KNNPWLDPFD 61

Query: 427 DGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKLRGDVRRCC 486
            G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGDVRRCC
Sbjct: 62  SGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDVRRCC 121

Query: 487 CVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFP 546
           CVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++P
Sbjct: 122 CVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPDDHWP 181

Query: 547 EPADYTDMVGLL-----------KLAGFGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLS 606
           EPA+YTDM+GLL           KLAG GHAAFLFMTTARDRVSYIYP+VN+AGAGL LS
Sbjct: 182 EPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGAGLMLS 241

Query: 607 QTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIVKEKYNQAG 666
           +TF  +++NLSE G++MY QM DWLGRPFRSVPR  + PL+VSISRK+KE+V  KY  AG
Sbjct: 242 ETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKYRNAG 301

Query: 667 VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENV 726
              GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENV
Sbjct: 302 AVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKERENV 361

Query: 727 EEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN--------------------REKAKLF 786
           E+ VGD+ SIVFITTPGQL   +  ++ ++A N                     EK KLF
Sbjct: 362 EDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEKGKLF 421

Query: 787 VPEAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL 788
           VP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 422 VPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot
Match: A0A059TC02 (Cinnamoyl-CoA reductase 1 OS=Petunia hybrida OX=4102 GN=CCR1 PE=1 SV=1)

HSP 1 Score: 542.0 bits (1395), Expect = 1.1e-152
Identity = 261/313 (83.39%), Postives = 284/313 (90.73%), Query Frame = 0


Query: 35  STTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYK 94
           S +   VCVTGAGGFIASW+VK+LL+KGY VRGTVRNP+DPKNGHL+E EGA ER +L K
Sbjct: 3   SVSGQVVCVTGAGGFIASWLVKILLEKGYTVRGTVRNPDDPKNGHLRELEGAKERLTLCK 62

Query: 95  ADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTS 154
           ADLLD++SLR AINGCDGVFHTASPVTDDPEQMVEPAV GTKNVI AAAEA VRRVVFTS
Sbjct: 63  ADLLDYQSLREAINGCDGVFHTASPVTDDPEQMVEPAVIGTKNVINAAAEANVRRVVFTS 122

Query: 155 SIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVV 214
           SIGAVYMDP+R P+ +VDE+CWSD +FCKNTKNWYCYGK VAEQAAWE AKEKGVDLVV+
Sbjct: 123 SIGAVYMDPNRDPETVVDETCWSDPDFCKNTKNWYCYGKMVAEQAAWEEAKEKGVDLVVI 182

Query: 215 NPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASG 274
           NPVLV GPLLQ T+NAS++HILKYLTGSAKTYANSVQAYV VKDVALAHIL+YE P ASG
Sbjct: 183 NPVLVQGPLLQTTVNASVLHILKYLTGSAKTYANSVQAYVDVKDVALAHILLYETPEASG 242

Query: 275 RYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVK 334
           RYLCAESVLHRG++VEIL+K FPEYPIPTKCSD   PR K YKFSNQKLKDLGLEFTPVK
Sbjct: 243 RYLCAESVLHRGDVVEILSKFFPEYPIPTKCSDVTKPRVKPYKFSNQKLKDLGLEFTPVK 302

Query: 335 QCLYETVKNLQEK 348
           QCLYETVK+LQEK
Sbjct: 303 QCLYETVKSLQEK 315

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot
Match: Q9S9N9 (Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CCR1 PE=1 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 3.2e-147
Identity = 253/319 (79.31%), Postives = 281/319 (88.09%), Query Frame = 0


Query: 29  MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAE 88
           MPVD +S    TVCVTGAGG+IASWIVK+LL++GY V+GTVRNP+DPKN HL+E EG  E
Sbjct: 1   MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKE 60

Query: 89  RFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVR 148
           R  L KADL D+E+L+AAI+GCDGVFHTASPVTDDPEQMVEPAVNG K VI AAAEAKV+
Sbjct: 61  RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVK 120

Query: 149 RVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKG 208
           RVV TSSIGAVYMDP+R P+ +VDESCWSDL+FCKNTKNWYCYGK VAEQAAWE AKEKG
Sbjct: 121 RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKG 180

Query: 209 VDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYE 268
           VDLVV+NPVLVLGP LQPTINAS+ H+LKYLTGSAKTYAN  QAYV V+DVALAH+LVYE
Sbjct: 181 VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYE 240

Query: 269 NPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGL 328
            PSASGRYL AES  HRGE+VEILAKLFPEYP+PTKC DE NPR K YKF+NQK+KDLGL
Sbjct: 241 APSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGL 300

Query: 329 EFTPVKQCLYETVKNLQEK 348
           EFT  KQ LY+TVK+LQEK
Sbjct: 301 EFTSTKQSLYDTVKSLQEK 319

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot
Match: Q9SAH9 (Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=CCR2 PE=1 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 2.7e-138
Identity = 239/319 (74.92%), Postives = 273/319 (85.58%), Query Frame = 0


Query: 29  MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAE 88
           M VDG       VCVTGAGG+IASWIVKLLL++GY VRGTVRNP DPKN HL+E +GA E
Sbjct: 1   MLVDGK-----LVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKE 60

Query: 89  RFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVR 148
           R +L+ ADLLD+E+L A I+GCDGVFHTASP+TDDPE M+EPAVNG K VI AAA+AKV+
Sbjct: 61  RLTLHSADLLDYEALCATIDGCDGVFHTASPMTDDPETMLEPAVNGAKFVIDAAAKAKVK 120

Query: 149 RVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKG 208
           RVVFTSSIGAVYM+P+R    IVDE+CWSDL+FCKNTKNWYCYGK +AEQ+AWE AK KG
Sbjct: 121 RVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKG 180

Query: 209 VDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYE 268
           VDLVV+NPVLVLGP LQ  INAS++HILKYLTGSAKTYAN  Q YV V+DVAL H+LVYE
Sbjct: 181 VDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYE 240

Query: 269 NPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGL 328
            PSASGRY+ AE+ LHRGE+VEILAK FPEYP+PTKCSDE NPR K YKF+ QK+KDLGL
Sbjct: 241 APSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGL 300

Query: 329 EFTPVKQCLYETVKNLQEK 348
           EF P+KQ LYE+VK+LQEK
Sbjct: 301 EFKPIKQSLYESVKSLQEK 314

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot
Match: Q6K9A2 (Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCR1 PE=1 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 4.1e-102
Identity = 183/307 (59.61%), Postives = 229/307 (74.59%), Query Frame = 0


Query: 41  VCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAERFSLYKADLLDF 100
           VCVTGAGGFI SW+VK LL +GY VRGT R+P D KN HL E EGA ER SL +AD+LD 
Sbjct: 18  VCVTGAGGFIGSWVVKELLIRGYHVRGTARDPADSKNAHLLELEGADERLSLCRADVLDA 77

Query: 101 ESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVRRVVFTSSIGAVY 160
            SLRAA +GC GVFH ASPV++DP+ +V  AV GT+NVI AAA+  VRRVVFTSS GAV+
Sbjct: 78  ASLRAAFSGCHGVFHVASPVSNDPD-LVPVAVEGTRNVINAAADMGVRRVVFTSSYGAVH 137

Query: 161 MDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVL 220
           M+P+R PD ++DE+CWSD EFCK T N YC  K +AE  A E A ++G++L VV P + +
Sbjct: 138 MNPNRSPDAVLDETCWSDYEFCKQTDNLYCCAKMMAEMTATEEAAKRGLELAVVVPSMTM 197

Query: 221 GPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYENPSASGRYLCAE 280
           GP+LQ T+N S  H+ +YL G+ K+Y N+V AYV V+DVA AH+LVYE P A GRYLC  
Sbjct: 198 GPMLQQTLNFSTNHVARYLMGTKKSYPNAVAAYVDVRDVARAHVLVYERPEARGRYLCIG 257

Query: 281 SVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGLEFTPVKQCLYET 340
           +VLHR E++ +L +LFP YP   KC D+  P  K YKFSNQ+LKDLGLEFTP+++ L E 
Sbjct: 258 TVLHRAELLRMLRELFPRYPATAKCEDDGKPMAKPYKFSNQRLKDLGLEFTPLRKSLNEA 317

Query: 341 VKNLQEK 348
           V  +Q+K
Sbjct: 318 VLCMQQK 323

[Close]

BLAST of Cp4.1LG12g07280 vs. NCBI nr
Match: XP_023548446.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 843 bits (2177), Expect = 2.44e-301
Identity = 427/471 (90.66%), Postives = 432/471 (91.72%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAGFGHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGFGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. NCBI nr
Match: KAG6575629.1 (Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014183.1 Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 833 bits (2151), Expect = 2.17e-297
Identity = 423/471 (89.81%), Postives = 429/471 (91.08%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAG GHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. NCBI nr
Match: XP_022953552.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 830 bits (2143), Expect = 3.57e-296
Identity = 421/471 (89.38%), Postives = 428/471 (90.87%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAG GHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP++EAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. NCBI nr
Match: XP_022992479.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 826 bits (2133), Expect = 1.18e-294
Identity = 418/471 (88.75%), Postives = 426/471 (90.45%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAG GHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRH VPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. NCBI nr
Match: XP_038896546.1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 777 bits (2006), Expect = 2.19e-275
Identity = 396/471 (84.08%), Postives = 414/471 (87.90%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPF P SSF PSSPSTHFTKP FLAPPDISLSTSSSS  KL IPS +KK
Sbjct: 1   MATSSLPTKSLPPFSPTSSFSPSSPSTHFTKPLFLAPPDISLSTSSSSSSKLLIPS-SKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           N WLDPFDDGDDP+MEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NQWLDPFDDGDDPEMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCV+SGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVMSGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPA+YTDMVGLLK           LAG GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPAEYTDMVGLLKGRYYDMVLSTKLAGLGHAVFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSISRKLKE+V
Sbjct: 241 AGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEVV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
            EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANA+RGFKPVFVIP
Sbjct: 301 AEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAVRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGD+ASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDDASIVFITTPGQLAALINDSAGVIATNTAAVQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCI VSS TGRL DID+GTVK+AIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCITVSSATGRLTDIDLGTVKKAIQSFEVPLALAFQ 470

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL
Match: A0A6J1GNJ2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111456057 PE=4 SV=1)

HSP 1 Score: 830 bits (2143), Expect = 1.73e-296
Identity = 421/471 (89.38%), Postives = 428/471 (90.87%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAG GHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP++EAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDSEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL
Match: A0A6J1JXN2 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111488799 PE=4 SV=1)

HSP 1 Score: 826 bits (2133), Expect = 5.70e-295
Identity = 418/471 (88.75%), Postives = 426/471 (90.45%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSP KLHIPSCAKK
Sbjct: 1   MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPSKLHIPSCAKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFP IQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPTIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPADYTDMVGLLK           LAG GHAAFLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPADYTDMVGLLKGRYYDMVLSTKLAGIGHAAFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLSQTFKP+SSNLSEGGFNMYHQM DWLGRPFRSVPRH VPPLKVSISRKLKEIV
Sbjct: 241 AGAGLFLSQTFKPESSNLSEGGFNMYHQMADWLGRPFRSVPRHPVPPLKVSISRKLKEIV 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
           KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP
Sbjct: 301 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVGDNASIVFITTPGQL   +  ++ ++A N                   
Sbjct: 361 HEKERENVEEEVGDNASIVFITTPGQLAALINDSAGVIATNTAAIQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCIAVSS TGRLIDIDMGTVKRAIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCIAVSSATGRLIDIDMGTVKRAIQSFEVPLALAFQ 471

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL
Match: A0A6J1CV27 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111014527 PE=4 SV=1)

HSP 1 Score: 771 bits (1990), Expect = 2.95e-273
Identity = 391/471 (83.01%), Postives = 413/471 (87.69%), Query Frame = 0


Query: 350 SMATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAK 409
           +MATSSLPTKSLPPFLP+S+ PPSSPSTHFTKP FLAPPDIS  +++ SP K HIP+ AK
Sbjct: 2   AMATSSLPTKSLPPFLPSSASPPSSPSTHFTKPLFLAPPDISPLSTTPSPPKSHIPT-AK 61

Query: 410 KNPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLK 469
           KNPW DPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLK
Sbjct: 62  KNPWFDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLK 121

Query: 470 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 529
           LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN
Sbjct: 122 LRGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSN 181

Query: 530 VYDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVN 589
           VYDPDDYFPEPA+YTDMVGLLK           LAG GHA FLFMTTARDRVSYIYPDVN
Sbjct: 182 VYDPDDYFPEPAEYTDMVGLLKSRYYDMVLSTKLAGVGHAVFLFMTTARDRVSYIYPDVN 241

Query: 590 AAGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEI 649
           AAGAGLFLS+TFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKV ISRKLKE+
Sbjct: 242 AAGAGLFLSETFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVLISRKLKEV 301

Query: 650 VKEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVI 709
           V+EKY +AG EKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIA+ IRGFKPVFVI
Sbjct: 302 VEEKYKKAGAEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIASTIRGFKPVFVI 361

Query: 710 PHEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKNR----------------- 769
           PHEKERENVEEEVGD+A I+FITTPGQL   +  ++ L+A N                  
Sbjct: 362 PHEKERENVEEEVGDDAGILFITTPGQLAALINDSAGLIATNTAAIQLAIAREKPSIALF 421

Query: 770 ---EKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAF 789
              EKAKLFVP+AE+KRCI VSS TGRLIDIDMGTVKRAIQSFEVPLALAF
Sbjct: 422 SSDEKAKLFVPDAESKRCITVSSATGRLIDIDMGTVKRAIQSFEVPLALAF 471

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL
Match: A0A5A7UYW0 (Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001650 PE=4 SV=1)

HSP 1 Score: 769 bits (1986), Expect = 9.90e-273
Identity = 391/471 (83.01%), Postives = 414/471 (87.90%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+P  ISLSTSS    KL IP C+KK
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISLSTSS----KLRIP-CSKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPW DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPA+YTDMVG+LK           LAG GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSI+RKLKE++
Sbjct: 241 AGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
            EKY +AGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIP
Sbjct: 301 AEKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
           HEKERENVEEEVG+NASIVFITTPGQL   +  ++ L+A N                   
Sbjct: 361 HEKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCI VSSTTGRLIDIDMGT+K+AIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAFQ 466

[Close]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL
Match: A0A1S3CEK1 (photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103499839 PE=4 SV=1)

HSP 1 Score: 766 bits (1978), Expect = 1.62e-271
Identity = 390/471 (82.80%), Postives = 413/471 (87.69%), Query Frame = 0


Query: 351 MATSSLPTKSLPPFLPASSFPPSSPSTHFTKPPFLAPPDISLSTSSSSPCKLHIPSCAKK 410
           MATSSLPTKSLPPFLP SSFPPSSPSTHFTKP FL+P  ISLSTSS    KL IP C+KK
Sbjct: 1   MATSSLPTKSLPPFLPTSSFPPSSPSTHFTKPLFLSPLLISLSTSS----KLRIP-CSKK 60

Query: 411 NPWLDPFDDGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKL 470
           NPW DPFDDG+DP+MEYGSLF+DGKQEEDPRPPDNPNNPYGFLKFPQGYMVE+ASLGLKL
Sbjct: 61  NPWFDPFDDGEDPEMEYGSLFSDGKQEEDPRPPDNPNNPYGFLKFPQGYMVEIASLGLKL 120

Query: 471 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 530
           RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV
Sbjct: 121 RGDVRRCCCVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNV 180

Query: 531 YDPDDYFPEPADYTDMVGLLK-----------LAGFGHAAFLFMTTARDRVSYIYPDVNA 590
           YDPDDYFPEPA+YTDMVG+LK           LAG GHA FLFMTTARDRVSYIYPDVNA
Sbjct: 181 YDPDDYFPEPAEYTDMVGVLKGRYYDMVLSTKLAGIGHAVFLFMTTARDRVSYIYPDVNA 240

Query: 591 AGAGLFLSQTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIV 650
           AGAGLFLS+TFKP+SSNLSEGGFNMYHQMVDWLGRPFRSVPRH VPPLKVSI+RKLKE++
Sbjct: 241 AGAGLFLSETFKPESSNLSEGGFNMYHQMVDWLGRPFRSVPRHPVPPLKVSIARKLKEVI 300

Query: 651 KEKYNQAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIP 710
            EKY +AGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPI+AWAEIAN IRGFKPVFVIP
Sbjct: 301 AEKYKKAGVEKGKYIVIHGIESDSKASMQSKGDTDSLLPIRAWAEIANCIRGFKPVFVIP 360

Query: 711 HEKERENVEEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN------------------- 770
            EKERENVEEEVG+NASIVFITTPGQL   +  ++ L+A N                   
Sbjct: 361 REKERENVEEEVGNNASIVFITTPGQLAALINDSAGLIATNTAAVQLAIAREKPSIALFC 420

Query: 771 -REKAKLFVPEAEAKRCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLALAFQ 790
             EKAKLFVP+AEAKRCI VSSTTGRLIDIDMGT+K+AIQSFEVPLALAFQ
Sbjct: 421 SEEKAKLFVPDAEAKRCITVSSTTGRLIDIDMGTIKKAIQSFEVPLALAFQ 466

[Close]

BLAST of Cp4.1LG12g07280 vs. TAIR 10
Match: AT1G15980.1 (NDH-dependent cyclic electron flow 1 )

HSP 1 Score: 574.7 bits (1480), Expect = 1.1e-163
Identity = 297/461 (64.43%), Postives = 349/461 (75.70%), Query Frame = 0


Query: 367 ASSFP--PSSPSTHFTKPPF-LAPPDISLS-----TSSSSPCKLHIPSCAKKNPWLDPFD 426
           ASS P  P   S  F  PPF  + P + L+     TS SS   +++    K NPWLDPFD
Sbjct: 2   ASSLPLLPKPISPFFKTPPFSTSKPLVFLNFQTRLTSRSSDVSVNLKK--KNNPWLDPFD 61

Query: 427 DGDDPDMEYGSLFADGKQEEDPRPPDNPNNPYGFLKFPQGYMVEVASLGLKLRGDVRRCC 486
            G+DPD EYGSLFADGKQ+EDPRPPDNP+NPYGFLKFP+GY VE+ASL LK+RGDVRRCC
Sbjct: 62  SGEDPDNEYGSLFADGKQDEDPRPPDNPDNPYGFLKFPKGYTVELASLPLKIRGDVRRCC 121

Query: 487 CVISGGVYENLLFFPAIQLLKDRYPGVQIDVVASARGKQTYELNKNVRWSNVYDPDDYFP 546
           CVISGGVYENLLFFP IQL+KDRYPGVQ+D++ + RGKQTYELNKNVRW+NVYDPDD++P
Sbjct: 122 CVISGGVYENLLFFPTIQLIKDRYPGVQVDILTTERGKQTYELNKNVRWANVYDPDDHWP 181

Query: 547 EPADYTDMVGLL-----------KLAGFGHAAFLFMTTARDRVSYIYPDVNAAGAGLFLS 606
           EPA+YTDM+GLL           KLAG GHAAFLFMTTARDRVSYIYP+VN+AGAGL LS
Sbjct: 182 EPAEYTDMIGLLKGRYYDMVLSTKLAGLGHAAFLFMTTARDRVSYIYPNVNSAGAGLMLS 241

Query: 607 QTFKPDSSNLSEGGFNMYHQMVDWLGRPFRSVPRHLVPPLKVSISRKLKEIVKEKYNQAG 666
           +TF  +++NLSE G++MY QM DWLGRPFRSVPR  + PL+VSISRK+KE+V  KY  AG
Sbjct: 242 ETFTAENTNLSELGYSMYTQMEDWLGRPFRSVPRTPLLPLRVSISRKVKEVVAAKYRNAG 301

Query: 667 VEKGKYIVIHGIESDSKASMQSKGDTDSLLPIQAWAEIANAIRGFKPVFVIPHEKERENV 726
              GK+IVIHGIESDSKASMQSKGD DSLL ++ WA+I   +RGFKPVFVIPHEKERENV
Sbjct: 302 AVTGKFIVIHGIESDSKASMQSKGDADSLLSLEKWAKIIKGVRGFKPVFVIPHEKERENV 361

Query: 727 EEEVGDNASIVFITTPGQLPTQLRSNSPLLAKN--------------------REKAKLF 786
           E+ VGD+ SIVFITTPGQL   +  ++ ++A N                     EK KLF
Sbjct: 362 EDFVGDDTSIVFITTPGQLAALINDSAGVIATNTAAIQLANARDKPCIGLFSSEEKGKLF 421

Query: 787 VPEAEAK-RCIAVSSTTGRLIDIDMGTVKRAIQSFEVPLAL 788
           VP AE K  C+ ++S TG+L DID+GTVK A+Q FE  LAL
Sbjct: 422 VPYAEEKSNCVIIASKTGKLADIDIGTVKNAMQVFEGSLAL 460

[Close]

BLAST of Cp4.1LG12g07280 vs. TAIR 10
Match: AT1G15950.1 (cinnamoyl coa reductase 1 )

HSP 1 Score: 523.9 bits (1348), Expect = 2.3e-148
Identity = 253/319 (79.31%), Postives = 281/319 (88.09%), Query Frame = 0


Query: 29  MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAE 88
           MPVD +S    TVCVTGAGG+IASWIVK+LL++GY V+GTVRNP+DPKN HL+E EG  E
Sbjct: 1   MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKE 60

Query: 89  RFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVR 148
           R  L KADL D+E+L+AAI+GCDGVFHTASPVTDDPEQMVEPAVNG K VI AAAEAKV+
Sbjct: 61  RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVK 120

Query: 149 RVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKG 208
           RVV TSSIGAVYMDP+R P+ +VDESCWSDL+FCKNTKNWYCYGK VAEQAAWE AKEKG
Sbjct: 121 RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKG 180

Query: 209 VDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYE 268
           VDLVV+NPVLVLGP LQPTINAS+ H+LKYLTGSAKTYAN  QAYV V+DVALAH+LVYE
Sbjct: 181 VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYE 240

Query: 269 NPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGL 328
            PSASGRYL AES  HRGE+VEILAKLFPEYP+PTKC DE NPR K YKF+NQK+KDLGL
Sbjct: 241 APSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGL 300

Query: 329 EFTPVKQCLYETVKNLQEK 348
           EFT  KQ LY+TVK+LQEK
Sbjct: 301 EFTSTKQSLYDTVKSLQEK 319

[Close]

BLAST of Cp4.1LG12g07280 vs. TAIR 10
Match: AT1G15950.2 (cinnamoyl coa reductase 1 )

HSP 1 Score: 512.7 bits (1319), Expect = 5.3e-145
Identity = 247/312 (79.17%), Postives = 274/312 (87.82%), Query Frame = 0


Query: 29  MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAE 88
           MPVD +S    TVCVTGAGG+IASWIVK+LL++GY V+GTVRNP+DPKN HL+E EG  E
Sbjct: 1   MPVDVASPAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKE 60

Query: 89  RFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVR 148
           R  L KADL D+E+L+AAI+GCDGVFHTASPVTDDPEQMVEPAVNG K VI AAAEAKV+
Sbjct: 61  RLILCKADLQDYEALKAAIDGCDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEAKVK 120

Query: 149 RVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKG 208
           RVV TSSIGAVYMDP+R P+ +VDESCWSDL+FCKNTKNWYCYGK VAEQAAWE AKEKG
Sbjct: 121 RVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKG 180

Query: 209 VDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYE 268
           VDLVV+NPVLVLGP LQPTINAS+ H+LKYLTGSAKTYAN  QAYV V+DVALAH+LVYE
Sbjct: 181 VDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLVYE 240

Query: 269 NPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGL 328
            PSASGRYL AES  HRGE+VEILAKLFPEYP+PTKC DE NPR K YKF+NQK+KDLGL
Sbjct: 241 APSASGRYLLAESARHRGEVVEILAKLFPEYPLPTKCKDEKNPRAKPYKFTNQKIKDLGL 300

Query: 329 EFTPVKQCLYET 341
           EFT  KQ LY+T
Sbjct: 301 EFTSTKQSLYDT 312

[Close]

BLAST of Cp4.1LG12g07280 vs. TAIR 10
Match: AT1G80820.1 (cinnamoyl coa reductase )

HSP 1 Score: 494.2 bits (1271), Expect = 2.0e-139
Identity = 239/319 (74.92%), Postives = 273/319 (85.58%), Query Frame = 0


Query: 29  MPVDGSSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNGHLKEFEGAAE 88
           M VDG       VCVTGAGG+IASWIVKLLL++GY VRGTVRNP DPKN HL+E +GA E
Sbjct: 1   MLVDGK-----LVCVTGAGGYIASWIVKLLLERGYTVRGTVRNPTDPKNNHLRELQGAKE 60

Query: 89  RFSLYKADLLDFESLRAAINGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEAKVR 148
           R +L+ ADLLD+E+L A I+GCDGVFHTASP+TDDPE M+EPAVNG K VI AAA+AKV+
Sbjct: 61  RLTLHSADLLDYEALCATIDGCDGVFHTASPMTDDPETMLEPAVNGAKFVIDAAAKAKVK 120

Query: 149 RVVFTSSIGAVYMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKG 208
           RVVFTSSIGAVYM+P+R    IVDE+CWSDL+FCKNTKNWYCYGK +AEQ+AWE AK KG
Sbjct: 121 RVVFTSSIGAVYMNPNRDTQAIVDENCWSDLDFCKNTKNWYCYGKMLAEQSAWETAKAKG 180

Query: 209 VDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYE 268
           VDLVV+NPVLVLGP LQ  INAS++HILKYLTGSAKTYAN  Q YV V+DVAL H+LVYE
Sbjct: 181 VDLVVLNPVLVLGPPLQSAINASLVHILKYLTGSAKTYANLTQVYVDVRDVALGHVLVYE 240

Query: 269 NPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDLGL 328
            PSASGRY+ AE+ LHRGE+VEILAK FPEYP+PTKCSDE NPR K YKF+ QK+KDLGL
Sbjct: 241 APSASGRYILAETALHRGEVVEILAKFFPEYPLPTKCSDEKNPRAKPYKFTTQKIKDLGL 300

Query: 329 EFTPVKQCLYETVKNLQEK 348
           EF P+KQ LYE+VK+LQEK
Sbjct: 301 EFKPIKQSLYESVKSLQEK 314

[Close]

BLAST of Cp4.1LG12g07280 vs. TAIR 10
Match: AT5G19440.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 303.9 bits (777), Expect = 3.7e-82
Identity = 162/321 (50.47%), Postives = 218/321 (67.91%), Query Frame = 0


Query: 34  SSTTAPTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDP-KNGHLKEFEGAAERFSL 93
           +S     VCVTGA G+IASW+VK LL +GY V+ +VR+P DP K  HL   EGA ER  L
Sbjct: 3   NSGEGKVVCVTGASGYIASWLVKFLLSRGYTVKASVRDPSDPKKTQHLVSLEGAKERLHL 62

Query: 94  YKADLLDFESLRAAINGCDGVFHTASPVTDDPE----QMVEPAVNGTKNVIIAAAEA-KV 153
           +KADLL+  S  +AI+GC GVFHTASP  +D +    ++++PAV GT NV+ + A+A  V
Sbjct: 63  FKADLLEQGSFDSAIDGCHGVFHTASPFFNDAKDPQAELIDPAVKGTLNVLNSCAKASSV 122

Query: 154 RRVVFTSSIGAV-YMDPSRGPDEIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKE 213
           +RVV TSS+ AV Y    R PD  VDE+ +SD E C+ +K WY   K +AE AAW++AKE
Sbjct: 123 KRVVVTSSMAAVGYNGKPRTPDVTVDETWFSDPELCEASKMWYVLSKTLAEDAAWKLAKE 182

Query: 214 KGVDLVVVNPVLVLGPLLQPTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILV 273
           KG+D+V +NP +V+GPLLQPT+N S   IL  + G AKT+ N    +V+VKDVA AHI  
Sbjct: 183 KGLDIVTINPAMVIGPLLQPTLNTSAAAILNLING-AKTFPNLSFGWVNVKDVANAHIQA 242

Query: 274 YENPSASGRYLCAESVLHRGEIVEILAKLFPEYPIPTKCSDEVNPRKKAYKFSNQKLKDL 333
           +E PSA+GRY   E V+H  EIV IL +L+P  P+P +C DE NP    Y+ S  K + L
Sbjct: 243 FEVPSANGRYCLVERVVHHSEIVNILRELYPNLPLPERCVDE-NPYVPTYQVSKDKTRSL 302

Query: 334 GLEFTPVKQCLYETVKNLQEK 348
           G+++ P+K  + ETV++L+EK
Sbjct: 303 GIDYIPLKVSIKETVESLKEK 321

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S9N6	1.6e-162	64.43	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Arabidopsis thali...	[more]
A0A059TC02	1.1e-152	83.39	Cinnamoyl-CoA reductase 1 OS=Petunia hybrida OX=4102 GN=CCR1 PE=1 SV=1	[more]
Q9S9N9	3.2e-147	79.31	Cinnamoyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=CCR1 PE=1 SV=1	[more]
Q9SAH9	2.7e-138	74.92	Cinnamoyl-CoA reductase 2 OS=Arabidopsis thaliana OX=3702 GN=CCR2 PE=1 SV=1	[more]
Q6K9A2	4.1e-102	59.61	Cinnamoyl-CoA reductase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCR1 PE=1 ...	[more]

BLAST of Cp4.1LG12g07280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548446.1	2.44e-301	90.66	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita pepo subs...	[more]
KAG6575629.1	2.17e-297	89.81	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic, partial [Cucurbita ...	[more]
XP_022953552.1	3.57e-296	89.38	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita moschata]	[more]
XP_022992479.1	1.18e-294	88.75	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Cucurbita maxima]	[more]
XP_038896546.1	2.19e-275	84.08	photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g07280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GNJ2	1.73e-296	89.38	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita moschat...	[more]
A0A6J1JXN2	5.70e-295	88.75	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucurbita maxima ...	[more]
A0A6J1CV27	2.95e-273	83.01	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Momordica charant...	[more]
A0A5A7UYW0	9.90e-273	83.01	Photosynthetic NDH subunit of subcomplex B 1 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3CEK1	1.62e-271	82.80	photosynthetic NDH subunit of subcomplex B 1, chloroplastic OS=Cucumis melo OX=3...	[more]

BLAST of Cp4.1LG12g07280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15980.1	1.1e-163	64.43	NDH-dependent cyclic electron flow 1	[more]
AT1G15950.1	2.3e-148	79.31	cinnamoyl coa reductase 1	[more]
AT1G15950.2	5.3e-145	79.17	cinnamoyl coa reductase 1	[more]
AT1G80820.1	2.0e-139	74.92	cinnamoyl coa reductase	[more]
AT5G19440.1	3.7e-82	50.47	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001509	NAD-dependent epimerase/dehydratase	PFAM	PF01370	Epimerase	coord: 41..272 e-value: 3.3E-27 score: 95.5
None	No IPR available	GENE3D	3.40.50.720		coord: 32..357 e-value: 5.6E-145 score: 484.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 425..447
None	No IPR available	CDD	cd08958	FR_SDR_e	coord: 41..328 e-value: 1.46865E-157 score: 457.807
None	No IPR available	SUPERFAMILY	53756	UDP-Glycosyltransferase/glycogen phosphorylase	coord: 488..710
IPR044983	Photosynthetic NDH subunit of subcomplex B 1, chloroplastic	PANTHER	PTHR37698	PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 1, CHLOROPLASTIC	coord: 740..788 coord: 351..732
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 39..344

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07280.1	Cp4.1LG12g07280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009773	photosynthetic electron transport in photosystem I
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0010598	NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003824	catalytic activity