Cp4.1LG12g07040 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g07040
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Ecotropic viral integration site protein
Location	Cp4.1LG12: 7204820 .. 7209566 (-)
RNA-Seq Expression	Cp4.1LG12g07040
Synteny	Cp4.1LG12g07040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAATTGGTCAATGCGTATTCCGTGGTTCATGCAAACGATAGAACGTGTCACATCGGCAACAATAATCGCCGATCCATCGTCAAAGGGATCAGATTGGTCGTCGTTCGTTCTACAAGTACCGAAATCCCGAAACATCTCTCAGTAAATTCCGAAGCCGATCACAGAAAAACATGGATCAGGAAGGGAAGGCAGACGAGCAACTGTTCAACCTTCTTGCCAGTCTTCTCCACCAGGTCGCAATTTCGCACGACTTTCCTCCTGATTCATCAATTTTTCAATGTTTAGTTCATATATCCTATTCGATTTTATAATTCTATTCGTGATTGAAGAGTATTTATGGATTGGAATTGACTAGTTTGTCATCTAGGTATTGTCGAGACGTTCCATTAGAACGACGAGTTAGGTTGATTGTGGATTTTTAGATGTTTGGAAAAGTGAGTAAATAATCAGGCTCGAGTTCGATGGTGCTTGCTCGATGACCGATGTTGCGTTGCGTCGATATTTTATTCTCTAGTATTTATTTTGGGAAATTTTTAATTACAGAGAAATAGGTGTTGGGGCTCCATGACGGCGAATTTTGGGGCTGTAGTGTTTCCTGTTATGTGTTATTGATTAAACCTTCTCTCATCTTTAATTTCATTCGAACATTGATCCTTGAGTGCTGGGTGGTTGAAGATTGGTTGGATCGTGTTTTATCGGGCACTGCGTATAGCTAAATTGTTCTAAGCATGTAAGAATTCTGTGTATGCTTAAGAAACATAGAAGAAGGTAATTGGCATTTCAATTATTTATAAATGACGTTGGGGCATTGTTGCAGTAGAAGATAATGGTCTATGCAAAAAGTAGCAAGCAAGAGGGGTCTTACTATGCAATTGGTTATTGATGTACACTGCCCTAGTTTGAACTTTAATTCAGTGTTAGGAAGTATACATTTAAGAGAACCATAGTGATCTAACTCCTGAACTCGGTTTTTACCAACCAAATTTTCCCTTACTACCCTTGTTCTGCGTTAATTGTCTGCTGAGGATTATTACGAGGCCTTTTGGGGAAGGCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGATTCCTAACATTGTCATGTTCATGGATCATGTATCATGTTTTTCTTTTGTGTTTTACCTACCAAACTCGCCACAATACTTATATTGGTAATGCCTTCTACGGTGATAAGTAACCAACACCTCTCAGTTCACACATTTTGATTTCTCTTCCAAAACCGGCTCAAATTTTATTTTTCATAACATTGACATGGGGTTGGGTCAAGGAATACTCCTTCAAGTCTTATTTATATTCTCACAGTCACACTACACTTTTATTATTATGCACCGAGCCTCATTCATGGGATGTGAAATCTCTAAGTTTGCGTCTTCATTCCCCTCAATGACAAAAAATTGTCTCGTCGTGAATCAAGATATTCTCCATCCATCAACTAATTGTACTTTATCCAGTGTTTGAACTTTCTTCATGTTACTGGAAACTACGAAGGTTAGTAGCACCGATTATAAAAAGGAAAGTGAGATTTTTTATGGGTAACAAGTGTCGAAAAGTTGAGCCATCTTGTTAACCAGCACATTGAAGCTGTACACTAGAGTTGGGAAGGGCTTGGAATGGATAACTTAGGGAGGGGAACATAATCTCTTGATAAAATGGCCACGAAGACTCCCTCCAAAGATTAAAGAACTTTGGAATAGAAGTGACTACCAGTTACTACAGGAAGAAGGAGGGGGATGGTTGGCCATACAGAGACAGTGTGAAGTACATGTAATCCTTGGAACATATCTAACCTAATAGAGTGCTTTTCTTCAATTAAAGTGTCTAATGCGTTAGATTCACCCTTTTGGAACAATTTTTGGGTTGGGATTAGCCTCTGTCAATGGTTTTTACCATTTGGCATAGTGACATCTAATAAGGAATGTGACAATCCAATGGGCATGGGGGAGAATTCTAGTTATTGGAAGGAAGGTACTTTCTAGAAATTCTTCTACCGTTTTTTGGGTAAGAGGAGGTGAGCGAGCTTCAAGATCTGAATGAACTACATCCAGAGCGGAGGACAATCAATTTCCCCCGTATTTAATTAGCCATTAAAGACTCGATCATGTTACCATTCCTAGGAATGTAATGATGCAAACACAATGTTGAGTTCTGCTATCACTTGGACATGATGTGCAACCTGGACTACCGTACAATTGCGTTGATCTTTAGTACCCTCCGGTCATTTCATCTCAGCTTCTAGCTTCACAGTTCGATCTCTAGACATCTCAACCAGTGAGGATATTTGCAAAAATCAAGCTCGTACATCTGGTTGGAAGAAAAACTTATACACTGATCTTAGTATTAAGAATCATTAAAAAAGACTAGCCTCTATCCAGCCAGCCTACAACATACCAACTACGAAAGACTTGAGAACAATTACTTGTAAAAGACATAGTCATTGATGCAAAACTAAAGTTATTTGTTGAACATGCGGATGAGTGTGGCTGTAGGATAGGACAGGGGCATGATATTGTGAAGGGCGTTTGGCCAATGATACTTGATGCGAAAAGGAAACTTCAAGTGCAAGAGGGCATAGAACCAAAAGCACACTTTGAACAAAAATTTACAATGGTGTTGGAGAGATTCCTCATAGATATGGGTTCATACTTGAGGCATTGTGTGTTTCACTCCATGGGCAGGTGGATTGATATATCTAAGAGGCAATACAAAATTTTGGTTTTAATCGTTATAGGTGAGCACATGCTAAAGGACTGGAGTTTTGGGAGCTATTTCTTCCATTGAAGTCAAGTTGAATTGCCATGGTAGCAGTGAAAAGTCTGAGAAGTAGTTTACTATCTTGTTGTTCAAAATTGAAAATAATAAATTCTTCAGTTTCTTCATCCTTGCTTGGAGCTGATTGAGAAATGCTATCTAAATTTGCTATCTGTAACCAGAAATGAGAAGATTTTTTTTTTCTTTACTTAAACTTCAAAAGTTCTTCTATATTATAAAGAAGACATTTTACGAGGTCAAGAAATTTTGTTCATACTTATGTTGGAGTTATTAATATTTGGCTCTTTATTTCTCTATTTCATGCTTTGCAATTATATCTATATTTCAATGTTATTTACCAAATTGAAACTTACATGCATGGTTCATTATGATACACGATATACTAAAATTTAATTTTGACACTCTTCTGTTTCACGAGTTAACAACCTTGGTTATGATATCATTTGATACAAAGTACATACAGAATCTAAATTTTTGTTGCACCATTCCCTTTGGGAATTGCACTGGGAAGCAGTTACAAGATTCTCCAGTTCTCGTTTGTTTGCCATTTACTAAATGCATTGTGCATTGAGTAGAAAACTTTTGGGCAAAAATGGTGAACGTCTTTGTCTATTATTGACCATGGAATGAGAAGAGCTAATTTCATAAAATTGTTATGAACTTATGATATCATTTAACGGAAGCACATGCTTTTAGATAAACATGGGTTCCTTCTCTAAACCAATTAGCAATGAGGGGAGTAATTCATCTTTCCAATGTGGAATCCTCAACATGCCCCTCAAGATGGGACCTCTTTGGATTTGCCACTCTTGAATCCGATCCCAATTTGTTTTTAGACTGAATATTCATTAGAGCTTTATAGGCTCTGATACCATGTTAGATACATATGGAGTTTTATCTCAAAATCCATTGACAATGAGAGACGTAATCCATTTATTTTATAAAGATTGTGTGGTCTCTTCATTTTTCTGATGTGGGATTGACACCATGCCCTCTCAAGACGTACACAAAATCAAGATCAACATGAAGACTGCAGTTGCACCACCCCCTTTGGAAGCTGGTGGGGGAAGCAGCGACAAGTTTCTTCAAGCTCTTGTTTGAACTATGTTTGTTTCAGAGAGTACCCATTGTTTAATATAATGCAATCAATTATTTGCTCGATATGTCTATCCATTCCTGGAAATTCAGGGAACTTATCTGCACTTTTCATTCCTAAACATACATTTATTTGTAGGTGGAATCACTCACTAACCAGGAAGAAGTTGAATTGCGTACAAAGATCGAAGCCCTTGGTCTTGAAGTTACGAAAGTACCCTCGAAGTCCTTAAAGCAGCTTGATGAAGTCAGTCTAGTTATCATTATACATTCATTGCATTTATCTCTGCCCAATTGCCAACACTTTCTTGAAGAGATTGATTTTTATGTCTAATTTTTTGCGTTCTACTCAGTTGGAAATTGCCAAGGAGTTGGATAAGCTATCTGAAAAGCTAGATGATGTGGATGAAATGATATCTTCAGCAATGGCTGCAGACCCACAGGTGCAGTCTCTGTTGAGCGATACTGCTGATATTTGGATGCCTGTGATAACTGCTTCCGCTGATGAACGACGAAAATTCACAGCTTCTGTTGGAGAAAATTCAGAAACAGAAGAGAATTGTGGCAGTTAGATATATATATTTAATTTTTTGCTTATTTATTTAAGGAATAAGTATAGTAATTTCATTGCTATATCACAATTTTGTTATATTTGACAAAGAATATGTCTTTACGCCAGCATTTACATTGGTTGGAATGTACTGTTTCCACTGGATAATTTATTGTGCCATCTTGTCTGTAGTAATCCTTCATAATTCTCTAGAGATTGAAGTTGCGAAGCCTTTTTATTGACGTAAAGTAACATCAAGTATGCTAATTATTGTATTTATC

mRNA sequence

TAATTGGTCAATGCGTATTCCGTGGTTCATGCAAACGATAGAACGTGTCACATCGGCAACAATAATCGCCGATCCATCGTCAAAGGGATCAGATTGGTCGTCGTTCGTTCTACAAGTACCGAAATCCCGAAACATCTCTCAGTAAATTCCGAAGCCGATCACAGAAAAACATGGATCAGGAAGGGAAGGCAGACGAGCAACTGTTCAACCTTCTTGCCAGTCTTCTCCACCAGGTGGAATCACTCACTAACCAGGAAGAAGTTGAATTGCGTACAAAGATCGAAGCCCTTGGTCTTGAAGTTACGAAAGTACCCTCGAAGTCCTTAAAGCAGCTTGATGAATTGGAAATTGCCAAGGAGTTGGATAAGCTATCTGAAAAGCTAGATGATGTGGATGAAATGATATCTTCAGCAATGGCTGCAGACCCACAGGTGCAGTCTCTGTTGAGCGATACTGCTGATATTTGGATGCCTGTGATAACTGCTTCCGCTGATGAACGACGAAAATTCACAGCTTCTGTTGGAGAAAATTCAGAAACAGAAGAGAATTGTGGCAGTTAGATATATATATTTAATTTTTTGCTTATTTATTTAAGGAATAAGTATAGTAATTTCATTGCTATATCACAATTTTGTTATATTTGACAAAGAATATGTCTTTACGCCAGCATTTACATTGGTTGGAATGTACTGTTTCCACTGGATAATTTATTGTGCCATCTTGTCTGTAGTAATCCTTCATAATTCTCTAGAGATTGAAGTTGCGAAGCCTTTTTATTGACGTAAAGTAACATCAAGTATGCTAATTATTGTATTTATC

Coding sequence (CDS)

ATGGATCAGGAAGGGAAGGCAGACGAGCAACTGTTCAACCTTCTTGCCAGTCTTCTCCACCAGGTGGAATCACTCACTAACCAGGAAGAAGTTGAATTGCGTACAAAGATCGAAGCCCTTGGTCTTGAAGTTACGAAAGTACCCTCGAAGTCCTTAAAGCAGCTTGATGAATTGGAAATTGCCAAGGAGTTGGATAAGCTATCTGAAAAGCTAGATGATGTGGATGAAATGATATCTTCAGCAATGGCTGCAGACCCACAGGTGCAGTCTCTGTTGAGCGATACTGCTGATATTTGGATGCCTGTGATAACTGCTTCCGCTGATGAACGACGAAAATTCACAGCTTCTGTTGGAGAAAATTCAGAAACAGAAGAGAATTGTGGCAGTTAG

Protein sequence

MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGENSETEENCGS

Homology

[Close]

BLAST of Cp4.1LG12g07040 vs. NCBI nr
Match: XP_022953424.1 (uncharacterized protein LOC111455983 [Cucurbita moschata] >XP_023547946.1 uncharacterized protein LOC111806741 [Cucurbita pepo subsp. pepo] >KAG6575661.1 hypothetical protein SDJN03_26300, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237 bits (604), Expect = 2.76e-78
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN
Sbjct: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120

Query: 121 SETEENCGS 129
           SETEENCGS
Sbjct: 121 SETEENCGS 129

[Close]

BLAST of Cp4.1LG12g07040 vs. NCBI nr
Match: XP_022991943.1 (uncharacterized protein LOC111488434 [Cucurbita maxima])

HSP 1 Score: 234 bits (598), Expect = 2.27e-77
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           +KELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN
Sbjct: 61  SKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120

Query: 121 SETEENCG 128
           SETEENCG
Sbjct: 121 SETEENCG 128

[Close]

BLAST of Cp4.1LG12g07040 vs. NCBI nr
Match: KAG7014211.1 (hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 231 bits (590), Expect = 4.16e-76
Identity = 129/132 (97.73%), Postives = 129/132 (97.73%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE--- 60
           MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDE   
Sbjct: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDEVSL 60

Query: 61  LEIAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASV 120
           LEIAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASV
Sbjct: 61  LEIAKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASV 120

Query: 121 GENSETEENCGS 129
           GENSETEENCGS
Sbjct: 121 GENSETEENCGS 132

[Close]

BLAST of Cp4.1LG12g07040 vs. NCBI nr
Match: XP_038899531.1 (uncharacterized protein LOC120086812 [Benincasa hispida])

HSP 1 Score: 224 bits (570), Expect = 2.53e-72
Identity = 122/127 (96.06%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           M QEGKADEQLF LLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 55  MAQEGKADEQLFQLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 114

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FTAS+GEN
Sbjct: 115 AKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTASIGEN 174

Query: 121 SETEENC 127
           SETEENC
Sbjct: 175 SETEENC 181

[Close]

BLAST of Cp4.1LG12g07040 vs. NCBI nr
Match: XP_004135903.1 (uncharacterized protein LOC101220647 [Cucumis sativus] >KGN45171.1 hypothetical protein Csa_015557 [Cucumis sativus])

HSP 1 Score: 217 bits (553), Expect = 1.65e-70
Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           M  EGKADEQLF LLA+LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MAHEGKADEQLFQLLANLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FT SVGEN
Sbjct: 61  AKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTPSVGEN 120

Query: 121 SETEENCGS 129
           SETE NC S
Sbjct: 121 SETEANCES 129

[Close]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL
Match: A0A6J1GPL7 (uncharacterized protein LOC111455983 OS=Cucurbita moschata OX=3662 GN=LOC111455983 PE=4 SV=1)

HSP 1 Score: 237 bits (604), Expect = 1.34e-78
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN
Sbjct: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120

Query: 121 SETEENCGS 129
           SETEENCGS
Sbjct: 121 SETEENCGS 129

[Close]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL
Match: A0A6J1JXP7 (uncharacterized protein LOC111488434 OS=Cucurbita maxima OX=3661 GN=LOC111488434 PE=4 SV=1)

HSP 1 Score: 234 bits (598), Expect = 1.10e-77
Identity = 127/128 (99.22%), Postives = 128/128 (100.00%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           +KELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN
Sbjct: 61  SKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120

Query: 121 SETEENCG 128
           SETEENCG
Sbjct: 121 SETEENCG 128

[Close]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL
Match: A0A0A0KBJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429570 PE=4 SV=1)

HSP 1 Score: 217 bits (553), Expect = 8.00e-71
Identity = 120/129 (93.02%), Postives = 122/129 (94.57%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           M  EGKADEQLF LLA+LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MAHEGKADEQLFQLLANLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLD+VDEMISSAMAADPQVQSLLSDTADIWMPVITASADERR FT SVGEN
Sbjct: 61  AKELDKLSEKLDNVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRNFTPSVGEN 120

Query: 121 SETEENCGS 129
           SETE NC S
Sbjct: 121 SETEANCES 129

[Close]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL
Match: A0A5A7UWV6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001220 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 3.80e-69
Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           M  EGKADEQLF LLA LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MAHEGKADEQLFQLLAGLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLD+VDEMISSAMA+DPQVQSLLSDTADIWMPVITASADERR FT+SVGEN
Sbjct: 61  AKELDKLSEKLDNVDEMISSAMASDPQVQSLLSDTADIWMPVITASADERRNFTSSVGEN 120

Query: 121 SETEENCGS 129
            ETE N GS
Sbjct: 121 PETEANRGS 129

[Close]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL
Match: A0A1S3CEA0 (uncharacterized protein LOC103499886 OS=Cucumis melo OX=3656 GN=LOC103499886 PE=4 SV=1)

HSP 1 Score: 213 bits (542), Expect = 3.80e-69
Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0


Query: 1   MDQEGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60
           M  EGKADEQLF LLA LLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI
Sbjct: 1   MAHEGKADEQLFQLLAGLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEI 60

Query: 61  AKELDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGEN 120
           AKELDKLSEKLD+VDEMISSAMA+DPQVQSLLSDTADIWMPVITASADERR FT+SVGEN
Sbjct: 61  AKELDKLSEKLDNVDEMISSAMASDPQVQSLLSDTADIWMPVITASADERRNFTSSVGEN 120

Query: 121 SETEENCGS 129
            ETE N GS
Sbjct: 121 PETEANRGS 129

[Close]

BLAST of Cp4.1LG12g07040 vs. TAIR 10
Match: AT2G44360.1 (unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 169.1 bits (427), Expect = 2.3e-42
Identity = 91/119 (76.47%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 4   EGKADEQLFNLLASLLHQVESLTNQEEVELRTKIEALGLEVTKVPSKSLKQLDELEIAKE 63
           EGK DEQLF LL+ LL QVESLTN EEVELR+KIEALGLEVTKVPSKS + L+E+EIAKE
Sbjct: 3   EGKPDEQLFQLLSGLLQQVESLTNTEEVELRSKIEALGLEVTKVPSKSAQHLNEVEIAKE 62

Query: 64  LDKLSEKLDDVDEMISSAMAADPQVQSLLSDTADIWMPVITASADERRKFTASVGENSE 123
           LDKLS KLDDVDEMISSA+A+DPQVQ+LLS TAD+WMPVITA A+ER  FTAS+ ++ +
Sbjct: 63  LDKLSAKLDDVDEMISSAIASDPQVQTLLSGTADVWMPVITAGAEERLNFTASLADDDD 121

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g07040 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG12g07040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022953424.1	2.76e-78	100.00	uncharacterized protein LOC111455983 [Cucurbita moschata] >XP_023547946.1 unchar...	[more]
XP_022991943.1	2.27e-77	99.22	uncharacterized protein LOC111488434 [Cucurbita maxima]	[more]
KAG7014211.1	4.16e-76	97.73	hypothetical protein SDJN02_24386 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038899531.1	2.53e-72	96.06	uncharacterized protein LOC120086812 [Benincasa hispida]	[more]
XP_004135903.1	1.65e-70	93.02	uncharacterized protein LOC101220647 [Cucumis sativus] >KGN45171.1 hypothetical ...	[more]

BLAST of Cp4.1LG12g07040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GPL7	1.34e-78	100.00	uncharacterized protein LOC111455983 OS=Cucurbita moschata OX=3662 GN=LOC1114559...	[more]
A0A6J1JXP7	1.10e-77	99.22	uncharacterized protein LOC111488434 OS=Cucurbita maxima OX=3661 GN=LOC111488434...	[more]
A0A0A0KBJ8	8.00e-71	93.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G429570 PE=4 SV=1	[more]
A0A5A7UWV6	3.80e-69	91.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEA0	3.80e-69	91.47	uncharacterized protein LOC103499886 OS=Cucumis melo OX=3656 GN=LOC103499886 PE=...	[more]

BLAST of Cp4.1LG12g07040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44360.1	2.3e-42	76.47	unknown protein; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 64..84
None	No IPR available	PANTHER	PTHR37727	ECOTROPIC VIRAL INTEGRATION SITE PROTEIN	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g07040.1	Cp4.1LG12g07040.1	mRNA