Cp4.1LG12g06700 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g06700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	C2H2-type zinc finger family protein
Location	Cp4.1LG12: 7326664 .. 7328783 (-)
RNA-Seq Expression	Cp4.1LG12g06700
Synteny	Cp4.1LG12g06700

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCATCCAAACATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGCTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGCCACCGCAAGCTCTCCCTCTCCTCAACACCTTCTCGGCGGAAACCACCGATCATCCCTCCTCTTCCACCAGCTACGAACACGACTCTCCGCCACTAGCTCTCGACTTCAGCCTCTCTTGCCCTAGCTCCAACTACTCTCGTTCCATCTCGCCGGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGGTAAATTTCTTTTCAAAAACCCTTTTTTTTCCCCTTTTGATCCATTTTGATTCCTTTTTGTATTGTAATTTTGTTTTGGGGTTTTGATTTAACGGGTCGTGAAATGTTCTTCCTGTCCCTTGGTACTTATATTGGAAGGAAGATCGAGTTCTTGCATTCAAACCATGACTTCTTCATTTTTTATTTTTATTTTTTGGTTAATTTCATAATAATAATTTATAATTTTTTAAGAACATGTTTCAGTTATATTATATCTTTTTTTAAAATTATTATTTTTAATTTCCATTTTTTGCAGAAAAATTAACAACATTTGAAGGTGTTTTCTTCAGAAAATAATAATTAAGAACAAAAACATGTTTTCCTTCTTCTATTAACTCTTTTAACCTAAAACTTACATTTAATTACACACCATTTAAGTAATTGTTCTAAGCAATATCAAATATTTTTAATCTAATTTTTATTGAATTTGGTTAATGAACGGTTAGAAATTACGATCATTTACAATGATATGATATTGTCCACTTTGAGTATTAGTTCTTATTGTTTTACTTTGGTTTCTCCAAAATACTTTATTCCGATAGACATAATATTTTTTTACTTATAAACCCATGATGTTCTCCTTAATCGAGGCTCGATTCTTTCTTTCTCTCGAGCCCTTGAATAAAGTACACCCATTGTTCGATACTTCAGCCATTTTTACTACACTTTTGAGACTCACAACTTCATTGTTCGACACTTGAGGATTCTGTAGACACGACTAAGTTAAATGCATGATTCTGATACCTTGTTAGGTACCACGAACATTCACAGTGATATGATATTGTCCACTTTGAGCATAAATTCTTCCTAGAATGCCTCATTCTAACCCTCTCGTGCTAAAACTTGAATCGAAAAATAATTCCTTTAGTGGGTTTGTGATATAATTAAATTTCCATCGGTTTAAGCTTTTGGGTTGATGTTGTCGTGCTATAATTTGTCGGGTAATGTCATTTCATGTTTCGTGTTTTCGATTGATATTGATAGTATTTGAATGTGTAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCCCGACCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCGTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCTCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTTGGCCTTGACTACTTTGACGACGACAATGAACCTGGGTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATTAATGACATCCTTTTTTTTGTTGTTGTCGTTTTTGTGTCGTGTGTGTGTTAAATAAGGCGTTGAACGATCGATGTTCATCGTCGTTATGTTCTGTGTATACGAAGCTGCAAATCATTTAGTTGTAAAGTTCTTGGATGGACATTGTGTTTTAGCATTCCTTTTGATTTTTTTAATATGACAATATCTTTTT

mRNA sequence

CATCATCCAAACATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGCTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGCCACCGCAAGCTCTCCCTCTCCTCAACACCTTCTCGGCGGAAACCACCGATCATCCCTCCTCTTCCACCAGCTACGAACACGACTCTCCGCCACTAGCTCTCGACTTCAGCCTCTCTTGCCCTAGCTCCAACTACTCTCGTTCCATCTCGCCGGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCCCGACCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCGTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCTCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTTGGCCTTGACTACTTTGACGACGACAATGAACCTGGGTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATTAATGACATCCTTTTTTTTGTTGTTGTCGTTTTTGTGTCGTGTGTGTGTTAAATAAGGCGTTGAACGATCGATGTTCATCGTCGTTATGTTCTGTGTATACGAAGCTGCAAATCATTTAGTTGTAAAGTTCTTGGATGGACATTGTGTTTTAGCATTCCTTTTGATTTTTTTAATATGACAATATCTTTTT

Coding sequence (CDS)

ATGACAGACCCTAATCACTCCAATTCCTTCAACTTCATCCCTCTCCCATCCTCTCCGCCTTCAAATTCCGGCTTCTCCCAATGCCGCCACCGTCCTCCTCCTCCTCCGCCACCGCAAGCTCTCCCTCTCCTCAACACCTTCTCGGCGGAAACCACCGATCATCCCTCCTCTTCCACCAGCTACGAACACGACTCTCCGCCACTAGCTCTCGACTTCAGCCTCTCTTGCCCTAGCTCCAACTACTCTCGTTCCATCTCGCCGGACCCCACTGGGAAAACCCTCGACGGCGATATTTCCGACCACCCTTTGCCGATCTCCGGCAAAGGTCAGTTCTGGATTCCGACCCCATCTCAGATCCTCATCGGTCCTACTCAGTTCTCTTGCCCTCTTTGTTCTAAAGCATTCAATAGATACAATAATCTTCAGATGCACATGTGGGGGCATGGTTCGCAATACAGAAAAGGACCAGAGTCACTAAAAGGAACACAGCCAACGGCAATGCTTAAGCTGCCATGCTATTGCTGCGCGCCAGGGTGCAAACACAACATCGACAACCCTCGGTCCCGACCGCTCAAGGACTTCCGCACCCTCCAAACGCATTACAAGCGAAAGCATGGAATCAAGCCGTTCACTTGTAGAAAATGCACCAAAGCCTTCGCGGTCAAAGGCGATTGGCGAACCCACGAGAAGAATTGTGGCAAGATTTGGTATTGCTTTTGTGGCTCGGACTTCAAACATAAGCGCTCTCTCAAGGACCACATTAAGGCCTTCGGTCGTGGACATGGTGCACTTGGCCTTGACTACTTTGACGACGACAATGAACCTGGGTCTGAACTTGAACACGAACAACACGAACCTCAACTCCTCTTCCATCTCCATTAA

Protein sequence

MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTSYEHDSPPLALDFSLSCPSSNYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH

Homology

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot
Match: Q9SVY1 (Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 2.2e-93
Identity = 159/257 (61.87%), Postives = 190/257 (73.93%), Query Frame = 0


Query: 34  PPPPPQALPLLNTFSAETTDHPSSSTSYEHDSPPLALDFSLSCPSSNYSRSISPDPTGKT 93
           P P  Q +  L   S+ ++   SS T++ H+               N+ + +  + +   
Sbjct: 131 PSPSAQEMASLLMMSSSSS---SSRTTHHHE-------------DMNHKKDLDHEYSHGA 190

Query: 94  LDGDISDHPLPISG----------KGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQM 153
           + G   D    + G          KGQ+WIPTPSQILIGPTQFSCP+C K FNRYNN+QM
Sbjct: 191 VGGGEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQM 250

Query: 154 HMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKR 213
           HMWGHGSQYRKGPESL+GTQPT ML+LPCYCCAPGC++NID+PR++PLKDFRTLQTHYKR
Sbjct: 251 HMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKR 310

Query: 214 KHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA 273
           KHGIKPF CRKC KAFAV+GDWRTHEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHGA
Sbjct: 311 KHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGA 370

Query: 274 LGLDYFDDDNEPGSELE 281
            G+D FD+++EP SE+E
Sbjct: 371 YGIDGFDEEDEPASEVE 371

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot
Match: Q8W031 (Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1)

HSP 1 Score: 324.3 bits (830), Expect = 1.4e-87
Identity = 160/272 (58.82%), Postives = 185/272 (68.01%), Query Frame = 0


Query: 32  PPPPPPPQALPLLNTFSAETTD----------HPSSSTSYEHDSPPLALDFSLSCPSSNY 91
           P  PP  +ALPLL+       +          H  SS+++  D P + +D  L  P+   
Sbjct: 56  PNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQISSSNF-LDDPLVTVDLHLGLPNYGV 115

Query: 92  SRS----ISPDPTGKTLD---------------GDISDHPLPISGKGQFWIPTPSQILIG 151
             S    I+PD T    D                D  DH   +     +WIPTPSQILIG
Sbjct: 116 GESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIG 175

Query: 152 PTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHN 211
           PTQF+CPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPT ML+LPC+CCAPGCK+N
Sbjct: 176 PTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNN 235

Query: 212 IDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGS 271
           ID+PR++PLKDFRTLQTHYKRKHG KPF CR C KAFAVKGDWRTHEKNCGK+WYC CGS
Sbjct: 236 IDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGS 295

Query: 272 DFKHKRSLKDHIKAFGRGHGALGLDYFDDDNE 275
           DFKHKRSLKDH+KAFG GH   G+D F  D+E
Sbjct: 296 DFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHE 326

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot
Match: Q8W030 (Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 4.1e-87
Identity = 168/298 (56.38%), Postives = 197/298 (66.11%), Query Frame = 0


Query: 32  PPPPPPPQALPLLNT----------------FSAETTDHPSSST-------SYEHDSPPL 91
           P  PP  +ALPLL+                 +  ETT+  S+S        SY HD   +
Sbjct: 120 PDSPPLREALPLLSLSPIHKHQEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHD---V 179

Query: 92  ALDFSLSCPSSNYSRSISPDPTGKTLDGD----------------ISDHPLPISG--KG- 151
            +D  L  P+     S S D    + D                   SDH     G  +G 
Sbjct: 180 TVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGN 239

Query: 152 ---QFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTA 211
               FWIPTPSQIL+GPTQFSCPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTA
Sbjct: 240 HLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTA 299

Query: 212 MLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWR 271
           MLKLPCYCCAPGCK+NID+PR+RPLKDFRTLQTHYKRKHG++PF CR+C KAFAVKGDWR
Sbjct: 300 MLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWR 359

Query: 272 THEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGH-GALGLDYFDDDNEPGSELEHEQ 284
           THEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E  S++E ++
Sbjct: 360 THEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQQE 412

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot
Match: Q9SGD1 (Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.5e-78
Identity = 129/184 (70.11%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 95  DGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 154
           D +I D  + + GK +FWIP+P+QI +GP QF+C +CSK FNRYNN+QMHMWGHGS++RK
Sbjct: 150 DEEIIDSDVEVCGK-RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRK 209

Query: 155 GPESLKGT-QPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCR 214
           G +SLKGT QP A+L+LPCYCCA GCK+NI++PRS+PLKDFRTLQTHYKRKHG KPF+C 
Sbjct: 210 GADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCG 269

Query: 215 KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHG---ALGLDYFD 274
           KC KA AVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDHI++FG GH    +L  D F+
Sbjct: 270 KCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFE 329

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot
Match: Q9FX68 (Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 5.9e-78
Identity = 147/263 (55.89%), Postives = 185/263 (70.34%), Query Frame = 0


Query: 36  PPPQALPLLNTFSAETTDHPSSSTSYEHDSPPLALDFSLSCPSS-NYSRSISPDPTGK-T 95
           PP Q  P   + +  T+  PSS   + H          L+ P+    +  I P  + K T
Sbjct: 22  PPGQQYP---SHNKPTSTKPSSDHEFNH---------PLTNPNGVTVALHIGPPSSDKET 81

Query: 96  LDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYR 155
           L G  +   L  + +GQ+WIP+ SQIL+GPTQFSC +C+K FNR+NN+QMHMWGHGSQYR
Sbjct: 82  LSGGNNQEGL-TARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYR 141

Query: 156 KGPESLKGTQ-PTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTC 215
           KGPESL+GT+  +++L+LPCYCCA GCK+NID+PRS+PLKDFRTLQTHYKRKHG KPF C
Sbjct: 142 KGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRC 201

Query: 216 R-KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA-------L 275
           R KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH A       +
Sbjct: 202 RKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTVSDRVV 261

Query: 276 GLDYFDDDNEPGSELEHEQHEPQ 288
           G+   D+D+E   E E +  E +
Sbjct: 262 GIGDADEDDEEEEEEEEDDVEEE 271

[Close]

BLAST of Cp4.1LG12g06700 vs. NCBI nr
Match: XP_023547954.1 (zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 635 bits (1639), Expect = 1.17e-230
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSNYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQIL 120
           YEHDSPPLALDFSLSCPSSNYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQIL
Sbjct: 61  YEHDSPPLALDFSLSCPSSNYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQIL 120

Query: 121 IGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCK 180
           IGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCK
Sbjct: 121 IGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCK 180

Query: 181 HNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFC 240
           HNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFC
Sbjct: 181 HNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFC 240

Query: 241 GSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           GSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 GSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293

[Close]

BLAST of Cp4.1LG12g06700 vs. NCBI nr
Match: XP_022954072.1 (zinc finger protein WIP2-like [Cucurbita moschata])

HSP 1 Score: 627 bits (1618), Expect = 2.09e-227
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPP PPPPQALPLLNTFSAETTDHPSSSTS
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPSPPPPQALPLLNTFSAETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]

BLAST of Cp4.1LG12g06700 vs. NCBI nr
Match: KAG6575684.1 (Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014239.1 Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 625 bits (1613), Expect = 1.21e-226
Identity = 291/295 (98.64%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPP PQALPLLNTFSAETTDHPSSST 
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPSPQALPLLNTFSAETTDHPSSSTR 60

Query: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]

BLAST of Cp4.1LG12g06700 vs. NCBI nr
Match: XP_022991919.1 (zinc finger protein WIP2-like [Cucurbita maxima])

HSP 1 Score: 616 bits (1588), Expect = 7.58e-223
Identity = 288/295 (97.63%), Postives = 288/295 (97.63%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSF FIPLPSSPPSNS FSQC  RPPPPPPPQALPLLNTFS ETTDHPSSSTS
Sbjct: 1   MTDPNHSNSFIFIPLPSSPPSNSPFSQCCRRPPPPPPPQALPLLNTFSPETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]

BLAST of Cp4.1LG12g06700 vs. NCBI nr
Match: XP_038897310.1 (zinc finger protein WIP2-like [Benincasa hispida])

HSP 1 Score: 508 bits (1309), Expect = 2.65e-180
Identity = 252/302 (83.44%), Postives = 260/302 (86.09%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPP-------QALPLLNTFSAETTD 60
           MTDPN+SNSFNFIPLP     N  FSQCR   PPPPPP       QALPLLNT S +T D
Sbjct: 1   MTDPNYSNSFNFIPLPP----NFPFSQCRRPLPPPPPPPPPSSPPQALPLLNTLSPDTAD 60

Query: 61  HPSSSTS-YEHDSPPLALDFSLSCPSSNYSRSISPDP-TGKTLDGDISDHPLPISGKGQF 120
           HPSS+TS Y+ +S  LALDFSLSCPSS+   S SPDP TGK LDG ISDHPL IS KGQF
Sbjct: 61  HPSSTTSSYDDESAALALDFSLSCPSSDLD-SFSPDPGTGKILDGRISDHPLSISCKGQF 120

Query: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLP 180
           WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+LP
Sbjct: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLP 180

Query: 181 CYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240
           CYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN
Sbjct: 181 CYCCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240

Query: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFH 293
           CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  E EH Q +  LL H
Sbjct: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPEPEH-QPQHGLLVH 296

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL
Match: A0A6J1GQ04 (zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111456445 PE=3 SV=1)

HSP 1 Score: 627 bits (1618), Expect = 1.01e-227
Identity = 292/295 (98.98%), Postives = 292/295 (98.98%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPP PPPPQALPLLNTFSAETTDHPSSSTS
Sbjct: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPSPPPPQALPLLNTFSAETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL
Match: A0A6J1JW58 (zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111488414 PE=3 SV=1)

HSP 1 Score: 616 bits (1588), Expect = 3.67e-223
Identity = 288/295 (97.63%), Postives = 288/295 (97.63%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPPPPQALPLLNTFSAETTDHPSSSTS 60
           MTDPNHSNSF FIPLPSSPPSNS FSQC  RPPPPPPPQALPLLNTFS ETTDHPSSSTS
Sbjct: 1   MTDPNHSNSFIFIPLPSSPPSNSPFSQCCRRPPPPPPPQALPLLNTFSPETTDHPSSSTS 60

Query: 61  YEHDSPPLALDFSLSCPSSN--YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120
           YEHDSPPLALDFSLSCPSSN  YSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ
Sbjct: 61  YEHDSPPLALDFSLSCPSSNLDYSRSISPDPTGKTLDGDISDHPLPISGKGQFWIPTPSQ 120

Query: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180
           ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG
Sbjct: 121 ILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPG 180

Query: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240
           CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC
Sbjct: 181 CKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYC 240

Query: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 293
           FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH
Sbjct: 241 FCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELEHEQHEPQLLFHLH 295

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL
Match: A0A0A0K6L1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428260 PE=3 SV=1)

HSP 1 Score: 502 bits (1293), Expect = 3.14e-178
Identity = 246/288 (85.42%), Postives = 255/288 (88.54%), Query Frame = 0


Query: 1   MTDPNHS-NSFNFIPLPSSPPSNSGFSQCRHRPPPPPP---PQALPLLNTFSAETTDHPS 60
           MTDPN+S NSFNFI LP   PSN   SQCR   PPPPP   PQALPLLNT S ET DHPS
Sbjct: 1   MTDPNYSSNSFNFIHLP---PSNFLLSQCRRPTPPPPPSSPPQALPLLNTLSPETADHPS 60

Query: 61  SST---SYEHDSPPLALDFSLSCPSSNYSRSISPDP-TGKTLDGDISDHPLPISGKGQFW 120
           SST   SY+ +S  LALD SLSCPSS+   S SPDP TGK +DGD+SDHPLPISGKGQ+W
Sbjct: 61  SSTTTRSYDDESAVLALDISLSCPSSDLD-SFSPDPGTGKIIDGDVSDHPLPISGKGQYW 120

Query: 121 IPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPC 180
           IPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+LPC
Sbjct: 121 IPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLPC 180

Query: 181 YCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNC 240
           YCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNC
Sbjct: 181 YCCAVGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNC 240

Query: 241 GKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELE 280
           GKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+
Sbjct: 241 GKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELD 284

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL
Match: A0A1S3CFK3 (zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103499917 PE=3 SV=1)

HSP 1 Score: 496 bits (1277), Expect = 8.61e-176
Identity = 244/289 (84.43%), Postives = 253/289 (87.54%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPP-----PPQALPLLNTFSAETTDHP 60
           MTDPN+SNSFNFI LP   PSN   SQCR RP PPP     PPQALPLLNT S ET DHP
Sbjct: 1   MTDPNYSNSFNFIHLP---PSNFLLSQCR-RPLPPPSPPSSPPQALPLLNTLSPETADHP 60

Query: 61  SSST---SYEHDSPPLALDFSLSCPSSNYSRSISPDPTG-KTLDGDISDHPLPISGKGQF 120
           SSST   SY+ +S  LALD  LSCPSS+   S SPDP   K +DG+ISDHPLPISGKGQ+
Sbjct: 61  SSSTTTCSYDDESAVLALDIGLSCPSSDLD-SFSPDPGNRKIIDGEISDHPLPISGKGQY 120

Query: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLP 180
           WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+LP
Sbjct: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLP 180

Query: 181 CYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240
           CYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN
Sbjct: 181 CYCCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240

Query: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELE 280
           CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+
Sbjct: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELD 284

[Close]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL
Match: A0A5A7UWS5 (Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00910 PE=3 SV=1)

HSP 1 Score: 494 bits (1271), Expect = 7.06e-175
Identity = 243/289 (84.08%), Postives = 252/289 (87.20%), Query Frame = 0


Query: 1   MTDPNHSNSFNFIPLPSSPPSNSGFSQCRHRPPPPP-----PPQALPLLNTFSAETTDHP 60
           MTDPN+SNSFNFI LP   PSN   SQCR RP PPP     PPQALPLLNT S ET DHP
Sbjct: 1   MTDPNYSNSFNFIHLP---PSNFLLSQCR-RPLPPPSPPSSPPQALPLLNTLSPETADHP 60

Query: 61  SSST---SYEHDSPPLALDFSLSCPSSNYSRSISPDPTG-KTLDGDISDHPLPISGKGQF 120
           SSST   SY+ +S  LALD  LSCPSS+     SPDP   K +DG+ISDHPLPISGKGQ+
Sbjct: 61  SSSTTTCSYDDESAVLALDIGLSCPSSDLDF-FSPDPGNRKIIDGEISDHPLPISGKGQY 120

Query: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLP 180
           WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAML+LP
Sbjct: 121 WIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLRLP 180

Query: 181 CYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240
           CYCCA GCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN
Sbjct: 181 CYCCAAGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKN 240

Query: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPGSELE 280
           CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEP  EL+
Sbjct: 241 CGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGALGLDYFDDDNEPSPELD 284

[Close]

BLAST of Cp4.1LG12g06700 vs. TAIR 10
Match: AT3G57670.1 (C2H2-type zinc finger family protein )

HSP 1 Score: 343.6 bits (880), Expect = 1.6e-94
Identity = 159/257 (61.87%), Postives = 190/257 (73.93%), Query Frame = 0


Query: 34  PPPPPQALPLLNTFSAETTDHPSSSTSYEHDSPPLALDFSLSCPSSNYSRSISPDPTGKT 93
           P P  Q +  L   S+ ++   SS T++ H+               N+ + +  + +   
Sbjct: 131 PSPSAQEMASLLMMSSSSS---SSRTTHHHE-------------DMNHKKDLDHEYSHGA 190

Query: 94  LDGDISDHPLPISG----------KGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQM 153
           + G   D    + G          KGQ+WIPTPSQILIGPTQFSCP+C K FNRYNN+QM
Sbjct: 191 VGGGEDDDEDSVGGDGGCRISRLNKGQYWIPTPSQILIGPTQFSCPVCFKTFNRYNNMQM 250

Query: 154 HMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKR 213
           HMWGHGSQYRKGPESL+GTQPT ML+LPCYCCAPGC++NID+PR++PLKDFRTLQTHYKR
Sbjct: 251 HMWGHGSQYRKGPESLRGTQPTGMLRLPCYCCAPGCRNNIDHPRAKPLKDFRTLQTHYKR 310

Query: 214 KHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA 273
           KHGIKPF CRKC KAFAV+GDWRTHEKNCGK+WYC CGSDFKHKRSLKDHIKAFG GHGA
Sbjct: 311 KHGIKPFMCRKCGKAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGNGHGA 370

Query: 274 LGLDYFDDDNEPGSELE 281
            G+D FD+++EP SE+E
Sbjct: 371 YGIDGFDEEDEPASEVE 371

[Close]

BLAST of Cp4.1LG12g06700 vs. TAIR 10
Match: AT1G51220.1 (WIP domain protein 5 )

HSP 1 Score: 324.3 bits (830), Expect = 9.9e-89
Identity = 160/272 (58.82%), Postives = 185/272 (68.01%), Query Frame = 0


Query: 32  PPPPPPPQALPLLNTFSAETTD----------HPSSSTSYEHDSPPLALDFSLSCPSSNY 91
           P  PP  +ALPLL+       +          H  SS+++  D P + +D  L  P+   
Sbjct: 56  PNSPPLREALPLLSLSPIRHQEQQDQHYFMDTHQISSSNF-LDDPLVTVDLHLGLPNYGV 115

Query: 92  SRS----ISPDPTGKTLD---------------GDISDHPLPISGKGQFWIPTPSQILIG 151
             S    I+PD T    D                D  DH   +     +WIPTPSQILIG
Sbjct: 116 GESIRSNIAPDATTDEQDQDHDRGVEVTVESHLDDDDDHHGDLHRGHHYWIPTPSQILIG 175

Query: 152 PTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTAMLKLPCYCCAPGCKHN 211
           PTQF+CPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPT ML+LPC+CCAPGCK+N
Sbjct: 176 PTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNN 235

Query: 212 IDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWRTHEKNCGKIWYCFCGS 271
           ID+PR++PLKDFRTLQTHYKRKHG KPF CR C KAFAVKGDWRTHEKNCGK+WYC CGS
Sbjct: 236 IDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNCGKLWYCSCGS 295

Query: 272 DFKHKRSLKDHIKAFGRGHGALGLDYFDDDNE 275
           DFKHKRSLKDH+KAFG GH   G+D F  D+E
Sbjct: 296 DFKHKRSLKDHVKAFGNGHVPCGIDSFGGDHE 326

[Close]

BLAST of Cp4.1LG12g06700 vs. TAIR 10
Match: AT3G20880.1 (WIP domain protein 4 )

HSP 1 Score: 322.8 bits (826), Expect = 2.9e-88
Identity = 168/298 (56.38%), Postives = 197/298 (66.11%), Query Frame = 0


Query: 32  PPPPPPPQALPLLNT----------------FSAETTDHPSSST-------SYEHDSPPL 91
           P  PP  +ALPLL+                 +  ETT+  S+S        SY HD   +
Sbjct: 120 PDSPPLREALPLLSLSPIHKHQEPTANHHEYYFMETTETSSNSNFLDQCQDSYRHD---V 179

Query: 92  ALDFSLSCPSSNYSRSISPDPTGKTLDGD----------------ISDHPLPISG--KG- 151
            +D  L  P+     S S D    + D                   SDH     G  +G 
Sbjct: 180 TVDLHLGLPNLGDGGSSSSDVVLDSTDHQEGHHDHHQDQGLEVTMASDHDDEHGGLQRGN 239

Query: 152 ---QFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRKGPESLKGTQPTA 211
               FWIPTPSQIL+GPTQFSCPLC K FNRYNN+QMHMWGHGSQYRKGPESL+GTQPTA
Sbjct: 240 HLHHFWIPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTA 299

Query: 212 MLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCRKCTKAFAVKGDWR 271
           MLKLPCYCCAPGCK+NID+PR+RPLKDFRTLQTHYKRKHG++PF CR+C KAFAVKGDWR
Sbjct: 300 MLKLPCYCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWR 359

Query: 272 THEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGH-GALGLDYFDDDNEPGSELEHEQ 284
           THEKNCGK+WYC CGSDFKHKRSLKDH+KAFG GH    G+D+  ++ E  S++E ++
Sbjct: 360 THEKNCGKLWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGIDH--EEEEAASDVEQQE 412

[Close]

BLAST of Cp4.1LG12g06700 vs. TAIR 10
Match: AT1G08290.1 (WIP domain protein 3 )

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-79
Identity = 129/184 (70.11%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 95  DGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYRK 154
           D +I D  + + GK +FWIP+P+QI +GP QF+C +CSK FNRYNN+QMHMWGHGS++RK
Sbjct: 150 DEEIIDSDVEVCGK-RFWIPSPAQIHVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFRK 209

Query: 155 GPESLKGT-QPTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTCR 214
           G +SLKGT QP A+L+LPCYCCA GCK+NI++PRS+PLKDFRTLQTHYKRKHG KPF+C 
Sbjct: 210 GADSLKGTIQPAAILRLPCYCCAEGCKNNINHPRSKPLKDFRTLQTHYKRKHGSKPFSCG 269

Query: 215 KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHG---ALGLDYFD 274
           KC KA AVKGDWRTHEKNCGK+WYC CGSDFKHKRSLKDHI++FG GH    +L  D F+
Sbjct: 270 KCGKALAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGSGHSPHPSLLFDGFE 329

[Close]

BLAST of Cp4.1LG12g06700 vs. TAIR 10
Match: AT1G13290.1 (C2H2-like zinc finger protein )

HSP 1 Score: 292.4 bits (747), Expect = 4.2e-79
Identity = 147/263 (55.89%), Postives = 185/263 (70.34%), Query Frame = 0


Query: 36  PPPQALPLLNTFSAETTDHPSSSTSYEHDSPPLALDFSLSCPSS-NYSRSISPDPTGK-T 95
           PP Q  P   + +  T+  PSS   + H          L+ P+    +  I P  + K T
Sbjct: 22  PPGQQYP---SHNKPTSTKPSSDHEFNH---------PLTNPNGVTVALHIGPPSSDKET 81

Query: 96  LDGDISDHPLPISGKGQFWIPTPSQILIGPTQFSCPLCSKAFNRYNNLQMHMWGHGSQYR 155
           L G  +   L  + +GQ+WIP+ SQIL+GPTQFSC +C+K FNR+NN+QMHMWGHGSQYR
Sbjct: 82  LSGGNNQEGL-TARQGQYWIPSLSQILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYR 141

Query: 156 KGPESLKGTQ-PTAMLKLPCYCCAPGCKHNIDNPRSRPLKDFRTLQTHYKRKHGIKPFTC 215
           KGPESL+GT+  +++L+LPCYCCA GCK+NID+PRS+PLKDFRTLQTHYKRKHG KPF C
Sbjct: 142 KGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRC 201

Query: 216 R-KCTKAFAVKGDWRTHEKNCGKIWYCFCGSDFKHKRSLKDHIKAFGRGHGA-------L 275
           R KC K FAV+GDWRTHEKNCGK+W+C CGSDFKHKRSLKDH++AFG GH A       +
Sbjct: 202 RKKCEKTFAVRGDWRTHEKNCGKLWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTVSDRVV 261

Query: 276 GLDYFDDDNEPGSELEHEQHEPQ 288
           G+   D+D+E   E E +  E +
Sbjct: 262 GIGDADEDDEEEEEEEEDDVEEE 271

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g06700 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVY1	2.2e-93	61.87	Zinc finger protein WIP2 OS=Arabidopsis thaliana OX=3702 GN=WIP2 PE=1 SV=1	[more]
Q8W031	1.4e-87	58.82	Zinc finger protein WIP5 OS=Arabidopsis thaliana OX=3702 GN=WIP5 PE=2 SV=1	[more]
Q8W030	4.1e-87	56.38	Zinc finger protein WIP4 OS=Arabidopsis thaliana OX=3702 GN=WIP4 PE=2 SV=1	[more]
Q9SGD1	1.5e-78	70.11	Zinc finger protein WIP3 OS=Arabidopsis thaliana OX=3702 GN=WIP3 PE=2 SV=1	[more]
Q9FX68	5.9e-78	55.89	Zinc finger protein WIP6 OS=Arabidopsis thaliana OX=3702 GN=WIP6 PE=2 SV=1	[more]

BLAST of Cp4.1LG12g06700 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547954.1	1.17e-230	100.00	zinc finger protein WIP2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022954072.1	2.09e-227	98.98	zinc finger protein WIP2-like [Cucurbita moschata]	[more]
KAG6575684.1	1.21e-226	98.64	Zinc finger protein WIP2, partial [Cucurbita argyrosperma subsp. sororia] >KAG70...	[more]
XP_022991919.1	7.58e-223	97.63	zinc finger protein WIP2-like [Cucurbita maxima]	[more]
XP_038897310.1	2.65e-180	83.44	zinc finger protein WIP2-like [Benincasa hispida]	[more]

BLAST of Cp4.1LG12g06700 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GQ04	1.01e-227	98.98	zinc finger protein WIP2-like OS=Cucurbita moschata OX=3662 GN=LOC111456445 PE=3...	[more]
A0A6J1JW58	3.67e-223	97.63	zinc finger protein WIP2-like OS=Cucurbita maxima OX=3661 GN=LOC111488414 PE=3 S...	[more]
A0A0A0K6L1	3.14e-178	85.42	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G428260 P...	[more]
A0A1S3CFK3	8.61e-176	84.43	zinc finger protein WIP2-like OS=Cucumis melo OX=3656 GN=LOC103499917 PE=3 SV=1	[more]
A0A5A7UWS5	7.06e-175	84.08	Zinc finger protein WIP2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of Cp4.1LG12g06700 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57670.1	1.6e-94	61.87	C2H2-type zinc finger family protein	[more]
AT1G51220.1	9.9e-89	58.82	WIP domain protein 5	[more]
AT3G20880.1	2.9e-88	56.38	WIP domain protein 4	[more]
AT1G08290.1	1.1e-79	70.11	WIP domain protein 3	[more]
AT1G13290.1	4.2e-79	55.89	C2H2-like zinc finger protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 210..230 e-value: 65.0 score: 6.0 coord: 126..148 e-value: 0.11 score: 21.6
IPR013087	Zinc finger C2H2-type	PFAM	PF00096	zf-C2H2	coord: 126..145 e-value: 0.0015 score: 18.9
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 128..148
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 126..153 score: 10.865721
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 125..148 e-value: 3.3E-6 score: 28.8
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 188..261 e-value: 5.5E-6 score: 28.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..65
None	No IPR available	PANTHER	PTHR45878:SF14	ZINC FINGER PROTEIN WIP2-LIKE	coord: 2..282
IPR043584	Zinc finger protein WIP	PANTHER	PTHR45878	ZINC FINGER PROTEIN WIP2	coord: 2..282
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 119..148
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 193..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g06700.1	Cp4.1LG12g06700.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048856	anatomical structure development
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity