
Cp4.1LG12g06500 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATAGTATTAAGAATTTTAAAAATATTACAAGAAATTGAAACTAGGAAAAGGAAATAGAACAAATATAATTTGCTTTTGAACATAAAGCAGCAGAAGAAAGAAAACACGAAAATCAATCATCAACTAACAACTCCCAGATATTTCTAGAATTGTAAGGAATTAGACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTATGTGTCGACGAAAACTGATAACGGCTCGGGCACACCGATGGCGTAAGAGACCTGGACAATGCACCTCCGTGCAAGCCCACTGGCAACTATGCTCTTAGCAGCCTGCCTGACGATGTAGGCACCACTCCTATCGACCTTGGTGGGATCCTTTCCGGAGAAAGCACCACCACCGTGGGCTCCCCAACCACCGTAGGTGTCGATGATGATCTTGCGTCCGGTAAGACCTGCATCACCATGGGGACCGCCAATGACAAATCGGCCTGAGGGGTTAAGGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAGGACATGGCTAAGGGGCATCAATTCAGGGGTCTCGTCAGTGGCATAGCCAAACATATGGCCTTGGTCACCAGCGCCAATCTCCTCAGGGCGCTTTGTGAAGTGGCCGTGAACACCCTGAGCAATATCTGGGCTCTGCTGCTCAATGTTAACCAGGACCTTGCAATTGTCAGCATCAAGACCAACATCGTCGGAAACGAATCCAATTTCTCGGCATGTGTCACGGACAATCTTTTCGTAGTCCACATTGGCCTTGGTAGTGATCTCTCCAAAGACCATGACCATGTTGGTCTTACTGCAGGTCTCACATGCGACCTTGCTGTCAGGGTCCTGAGCTAGGCAAGCGTCGAGCACCGCATCAGAGATCTGGTCACAGAGCTTGTCGGGGTGACCCTCATTTACGGATTCAGAGGTAAATAGAAAGGTCTCCATCTCTGAAACATAACAAACACCATATTAGATCGTGTACAAAAATATTCAGTTCATTCATTATGTCAATTGTTAACCTTTCTGTTCCAATTTAGTCACATCAATTAGGCAGAAACATCTTGTATGTTGTTAAAGATTGGAAACAATCATCAGTTACAAGAGCAAGCTCGACGCATACTCATCTTGAAATCAAAACAGGATTACAGAAATCTGGGTGATACAAGCACAGATCAAAGCAACTTTTCGAAATTTTTAATGAATGGAATGACGCCATGGTTCGAAAGTAGCCTTGACAAATCTGAACAGTCCAACAGGGTTCGAAGGTAGGGAAACAAAATCAAACTTGGAAAATTCAAGATCTGTCCTGAGGAATCCTTAACAATTCGACTGGATCTACAATTCGACCACAGAGATCGTTCGCTACCAAATCGAATTACCAGCAACAATAAGAAATTGAGAAAACAAAAACAAAAACAAAAATCTTTGATCTAACCATGGATCTAGGGAATCCTAAAATTGTTACACGAAAACCGCGGGAAACCAGTACGCCGACATGATCTTTTTTCTTTTACTTACAAATCGGATCGTGCTATTCAACAAACAGTTTGTGGTGACAAACAAAAGCTGACAACCAAAACAGAGCTACCAGAGAAACATAAAGAAAAAGCCCCAAACACCCGAGATCCCGAATCTCAGAGAGCACAAAACAGTATCGAAGTTACAATCACTAGTTCCAGATGAATTCTTTTTTTAAAAAATGTCAGATCTGCAAGATTTCACATCTCAGAAAAAGAGAAACAGAGTTCATAGCAACATACAAGCACCAGACACCCGATTCAAACAAAATGAGTACCACTAGCTTACATAGCAGAAAAAAAAAACCCCAAATTCGTTCAGAAACCAGGAGAAAAAAGGGGAAATGAAGAACCACAAGCATGCTCAAAGCCTCATGAAATTAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAGAAAGAAATGGCAATGAACGAGCGGTAGAACAGAGCTCGCAAACCTGGTGATATCGGCTGCGTAGATCTGGAAGAGAGAAAGAATTTGAGCTAATACGCCAACCGAACCAGACCTCTGTAAGAAGGCGAAGCTCAACGGTACAAGG ATGGATAACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAGGACATGGCTAAGGGGCATCAATTCAGGGGTCTCGTCAGTGGCATAGCCAAACATATGGCCTTGGTCACCAGCGCCAATCTCCTCAGGGCGCTTTGTGAAGTGGCCGTGAACACCCTGAGCAATATCTGGGCTCTGCTGCTCAATGTTAACCAGGACCTTGCAATTGTCAGCATCAAGACCAACATCGTCGGAAACGAATCCAATTTCTCGGCATGTGTCACGGACAATCTTTTCGTAGTCCACATTGGCCTTGGTAGTGATCTCTCCAAAGACCATGACCATGTTGGTCTTACTGCAGGTCTCACATGCGACCTTGCTGTCAGGGTCCTGAGCTAGGCAAGCGTCGAGCACCGCATCAGAGATCTGGTCACAGAGCTTGTCGGGGTGACCCTCATTTACGGATTCAGAGGTAAATAGAAAGGTCTCCATCTCTGAAACATAACAAACACCATATTAGATCGTGTACAAAAATATTCAGTTCATTCATTATGTCAATTGTTAACCTTTCTGTTCCAATTTAGTCACATCAATTAGGCAGAAACATCTTGTATGTTGTTAAAGATTGGAAACAATCATCAGTTACAAGAGCAAGCTCGACGCATACTCATCTTGAAATCAAAACAGGATTACAGAAATCTGGGTGATACAAGCACAGATCAAAGCAACTTTTCGAAATTTTTAATGAATGGAATGACGCCATGGTTCGAAAGTAGCCTTGACAAATCTGAACAGTCCAACAGGGTTCGAAGGTAGGGAAACAAAATCAAACTTGGAAAATTCAAGATCTGTCCTGAGGAATCCTTAACAATTCGACTGGATCTACAATTCGACCACAGAGATCGTTCGCTACCAAATCGAATTACCAGCAACAATAAGAAATTGAGAAAACAAAAACAAAAACAAAAATCTTTGATCTAACCATGGATCTAGGGAATCCTAAAATTGTTACACGAAAACCGCGGGAAACCAGTACGCCGACATGATCTTTTTTCTTTTACTTACAAATCGGATCGTGCTATTCAACAAACAGTTTGTGGTGACAAACAAAAGCTGACAACCAAAACAGAGCTACCAGAGAAACATAAAGAAAAAGCCCCAAACACCCGAGATCCCGAATCTCAGAGAGCACAAAACAGTATCGAAGTTACAATCACTAGTTCCAGATGAATTCTTTTTTTAAAAAATGTCAGATCTGCAAGATTTCACATCTCAGAAAAAGAGAAACAGAGTTCATAGCAACATACAAGCACCAGACACCCGATTCAAACAAAATGAGTACCACTAGCTTACATAGCAGAAAAAAAAAACCCCAAATTCGTTCAGAAACCAGGAGAAAAAAGGGGAAATGAAGAACCACAAGCATGCTCAAAGCCTCATGAAATTAAAAAAAAAAAAAAAAGAAGAAAAAAAAAGAAGAAAGAAATGGCAATGAACGAGCGGTAGAACAGAGCTCGCAAACCTGGTGATATCGGCTGCGTAGATCTGGAAGAGAGAAAGAATTTGAGCTAATACGCCAACCGAACCAGACCTCTGTAAGAAGGCGAAGCTCAACGGTACAAGG ATGGATAACCAACCGGATGGGATGATCTCTTTAAGATTGAGGCTTCTCCCACTTGAGTGGCTTGACAATCTCCCAGGTGAAGTCCGGGTCCTCCCTTCCGAAGTGTCCATATGCTGCTGTCTTCAAGAATCTCCCATTGCCACCCCTCTTCAGATCAAGGTTGATGGTGATCATTCCGGGCCTGAAGTCGAAGTTCTCCTTCACGATTTCCAGGATTTCCTTGTCGGGGATCTTACCGGTTTTGTGGAAGATGGTCTTCTCGTCGAGGTACTTCTCGGGGATGACGGGCTTGATGACATGCTCTTTGAGGTCTGCAGCGATCTCGTCGTTGGTGACGGTCTCATCGTGCTGGGTGGAGATCAGAACTGTGTGCACACGGACGGGTACCATGGCGCCATTGTCGTTGTAGTACTCGACAGTAACTTGGGTCTTGCCATCAGGTCTCAACCAGGGGCAGGTGCCATTCTTTCTAACTTCAGTGAGACGAGCGCCCAACTTGGTGGCTAG MDNQPDGMISLRLRLLPLEWLDNLPGEVRVLPSEVSICCCLQESPIATPLQIKVDGDHSGPEVEVLLHDFQDFLVGDLTGFVEDGLLVEVLLGDDGLDDMLFEVCSDLVVGDGLIVLGGDQNCVHTDGYHGAIVVVVLDSNLGLAIRSQPGAGAILSNFSETSAQLGG Homology
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: CAG1859014.1 (unnamed protein product [Musa acuminata subsp. malaccensis]) HSP 1 Score: 149 bits (376), Expect = 7.98e-40 Identity = 90/249 (36.14%), Postives = 122/249 (49.00%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: BAT76997.1 (hypothetical protein VIGAN_01507600 [Vigna angularis var. angularis]) HSP 1 Score: 141 bits (355), Expect = 1.61e-37 Identity = 92/248 (37.10%), Postives = 122/248 (49.19%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: KAB8081212.1 (hypothetical protein EE612_002221, partial [Oryza sativa] >BAS71861.1 Os01g0323775, partial [Oryza sativa Japonica Group]) HSP 1 Score: 143 bits (360), Expect = 2.52e-37 Identity = 95/246 (38.62%), Postives = 119/246 (48.37%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: BAT76999.1 (hypothetical protein VIGAN_01507800 [Vigna angularis var. angularis]) HSP 1 Score: 133 bits (335), Expect = 1.51e-34 Identity = 89/247 (36.03%), Postives = 119/247 (48.18%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. NCBI nr
Match: KRY05292.1 (hypothetical protein T12_14541, partial [Trichinella patagoniensis]) HSP 1 Score: 105 bits (262), Expect = 1.28e-24 Identity = 51/86 (59.30%), Postives = 68/86 (79.07%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. ExPASy TrEMBL
Match: A0A0S3R8M6 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G507600 PE=4 SV=1) HSP 1 Score: 141 bits (355), Expect = 7.80e-38 Identity = 92/248 (37.10%), Postives = 122/248 (49.19%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. ExPASy TrEMBL
Match: A0A0P0V1R5 (Os01g0323775 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0323775 PE=4 SV=1) HSP 1 Score: 143 bits (360), Expect = 1.22e-37 Identity = 95/246 (38.62%), Postives = 119/246 (48.37%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. ExPASy TrEMBL
Match: A0A0S3R8R5 (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G507800 PE=4 SV=1) HSP 1 Score: 133 bits (335), Expect = 7.31e-35 Identity = 89/247 (36.03%), Postives = 119/247 (48.18%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. ExPASy TrEMBL
Match: J3KZC6 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1) HSP 1 Score: 117 bits (292), Expect = 7.03e-28 Identity = 78/218 (35.78%), Postives = 96/218 (44.04%), Query Frame = 0
BLAST of Cp4.1LG12g06500 vs. ExPASy TrEMBL
Match: A0A7C9CRS8 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 108 bits (269), Expect = 4.53e-26 Identity = 53/87 (60.92%), Postives = 69/87 (79.31%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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