Cp4.1LG12g06070 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g06070
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Multifunctional methyltransferase subunit TRM112-like protein
Location	Cp4.1LG12: 7753827 .. 7758204 (-)
RNA-Seq Expression	Cp4.1LG12g06070
Synteny	Cp4.1LG12g06070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTTCATATATTTTCATATTAAATAAATCCTGCCGCGAACGCTACTCTCTCTCTCTCCCCCAACAGGCTGCTTCAAGTGAAGCTTACTCTCCCAATATTGAACCCTAAACCCTCCCAGATCGCGAAGCGCAAATTTAGACGAGTTTCCACCGGTAGATGGTGGCGGCCGCAATCAGAACACCATAAGCAGTTCCTATCATCTTGTACCATCCGATCGCTTCGATCTTCTTCGGTAAGAACTCTGAGTTCTTTTCTAGATCCACCGTTTTCTTTGATTTTCGATTTTTTTTCGTTGGATTGTACGTATGTTTAATGTATGCGTTCTCTTTTGTCTCTTATTTGTTGAATTGGTGATTTGTACTCTTTCCGTTTTGGATTTTTTGGATTTGAATTTGATTTCGGGTAGGTGCAAGGGCTGGTTTTCTGTGCATTTTTTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGGGGATGGATTTGAGAGACTGCGATGGATGGTGTGGTGTTGAGTTTGATTGTATTTCATGGGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGAAAATAAGCCAAAAAGGAGCAATCCATCAGAGCCGTTTTACTGGAATGGGGTGTTGGATGATGGAAGTCTCACATCGATTACTTTAGGGAATGATCATGAGTTTATAAGTGAGGAATACTAACTCCATTGGCATGAGGCATTTTGGGGAAGCCCAAAGCAAAGCCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGAAGAGTCATGTTCGTCTAACCTGGGGTGCTCCATACAGCAGAGGAGGGGAGGATTAGATTAGTATATTAGCAGAGATACATAACAATATGAATAAAAAGATAGCATAAGAACCAAAATCAATGAGTTTCTGTGATACATTACTTCAAAGATGAGGGAGGTTACAATTCCTTTTGGGTGTTTGGAACTAGAAAATTTTATGGTTATTTCTTATTTTAAACCATTCAAGCCCTTTTGCTGTAGAATAGATCAACCCAGTTCCCGCTTTTTCGGTGCACTCGCTTTATATCTCCGACACACAAGGAAGGACGCGGTGGGAAGAAAGCAGCCCTAGCCTCTGTCTGGCCGATCATTCCGCTGGCATCTTGCATTCACGCCTCTGTTTGACTGCCGCTCGGGGTTATATTTGTAGATTATATTAAGGAGATATTTCATCGAGTTGAAATTTGCCTGATTCATTAGATACATGTTAGTCAAAACAGGTTTTGAGATAATTTGTTTGATTTATAGATATCCAATAGACTTTTCATGGAATAAATGCTCTCATAAATGATTAGATTGTGTGTTAACACTCTTTTTTAGACAGGAATTTTGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGAAAAAGATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGGTATCCCCAATTTGCTTCTTCACGAGGACGAAGTATGAGTTCGAGTTCCATAATGTATGAATTCCTCCGTTATATTCAGTGAGAGAAAGCAAGTTTCCAGAATTCATATCTGGATGTTTATGTGAATTGGAAAATTAGGATTGAAGCTAATTTATTATTTACTAAAAATAGTCCATTTTTATTTTAACTTTTCAGCTGTGTGACATTTTTTAACGGTTGAATTTGATGAAATTAAAAGTTTATGATAAAAATGGATATAACGTGACAAGTTCATCAATTTTTACTTTAAGCTTTTATAAACTTACTAATTTTATATAATATCATATTTTGTAAACTATATATATAATAAAATTTTAGTTTTTATTTTTTAACTAATTTTTTAAAAATTAAATCAAAGGGTAAAAATGGTAATATATATATATATATATTAAAAAAAAAAAACTAATTTTTGATATATTTTAATACTAAATAAAAGCTTGTTGACGTGTTCAAGTGGACCCTACTCTCTCTTATAGGCGCAAATTGGGACTCAAGTTTCCACCGATAAAAAGCCGAAGGCCGCACTCCGAAGACCATAACAGTTCCTATCATCTGGCGCCATCCGGTTGCTTCTCGATCTCCCTGGTAAGAACTCGGAGTTCTCTAGATCCATCCTTCTCTTTGATTTTCGATCTTTTGTCTCTACCTTGTTTATTTTTTAATCTTTGGTGTGTGATTTCGTGCTTTAATTTGGTCTGATTATACGTACGTTGAATGAATGGGTTTTCTTTTGTCTCTTATTTGTTGAAATGGGGATTTGTACTCTTTTCGTTTTGGATTTTCTGGATTTGAATTTGATTTGGGGTATATGCAAGGGCTGGTTTTCTGTGCTTTTTGTTTTTCTTTTTTCGGCAAAACCTAGTTTCGATTTTCCTGGTATAGATTTGAGAGACTGCGATGGATGGTGTGGTGTTTAGTTTGATGGAATTTCATGGGTTTGGAGATGTTGAATGGAAATTTGGTGTCCTTTAGTGTAAATAAGCCAAAAGGCAGCAATCCATCTGAGCCCTTTTACTGGAACGGGGAACGTAGTACAGCAGAGGAGGGGAGGATGAGAAATTTAGTCCACAGCTGCAAGAAAGAGGGTAGATTAGTATATTACCAGAGATACATAATAGCATCAATAAAGATAGCTTGATTAAGATGGCCAGCCATCATCCGTTGTTGCTTTTTCTTCATTTCCCATAAGAACCAAAATCAATGAGTTTCTGTGATAGATTACTTTCAAAGATGAGAAGGTGTCTCGTAGATGATGACCCCTTTTGGCTATTTTGTAGTGCATTTGACTTGATGGAAACAGCAACGACTTTTAGGGGATCAATATAACTTGGGAGGAGGTTTGATCTCTAGGGAGGCCACACTTCCTTTTGGGTGTTTGTAACTATTAAATTTTATGGTTATTTCTTCTTATAAACCATTGGAGCCCTTTTTCTGTAAGGCTTTTGCCTTTTGTCTTGGCCTTTGGCTTGGGCTGATTTCTTTTGTGTTGTGTATTGCCCATTTGCATATTCTTTCATTTTCTTCGTTTAATCATTTATGATGATCATAACAATAAATGAAGCCTAGTTTCCTTCACTTCGTTTCCTAAGTAGGGAGGGATGTTATTGCTTTTTAAAGGATGAGAGTCCTCTTTGAACTTGCCCTTGCCCTTGCCCTTGCAAATATTGTGTTCAAGTTTCCTTGTTCTAATAAGTGTTCGCCTTCGATATCTTGGGCAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAGATCTTACACTCTATCATGATATTGTTGAACACATTCACCAGTTTGTTTATCATTTTTTGAAAACCTCTTTGTTTTGCTCTTTGGATTAGAGATGATGACCTGTTTATCTTTTGCATCAGTTTCTACAAATAAGATATGAGAGAGATTTTGGTGGACTTAATAATAAACCTTATTTCATGATTTATTAGTCTTTTGTGCATCATCAGAGCCAAAAGGCTATCCTGGAATTGTGCAATGCAGTGATGTTTATGGAGGGCATAGAGTATTTGTTATGATTTGCTAGACATTTGTGGATCCCTTCCAGCGTTCGACCTTGGTGGAGTGCTTGATTTGGTCAAATGAACATTGGTTGTGAAATCAATCCATATATTTCAATGCATACAATTTCTTTTCCCTATGGAATTATTGCTTAGCTCAGACGGGAGAAAATGTGAACTTTATTTGTGCATTTAGAACCAGAAATGTTAGCTGTTTGTCGAATTCTTCCTTGATTATGAAATGATGAACGATATATGCAGCACTTGTGTGTCGCTTTTGAGTGGTTTGGCTAAGAATCGTGTAACTCGATTGCAATCATGATAACCTAGAACAAAAATTGAAATTTGAATTGTCAAAGTTGTGAGGATTGTTTATTCGATTTT

mRNA sequence

TTTTTCATATATTTTCATATTAAATAAATCCTGCCGCGAACGCTACTCTCTCTCTCTCCCCCAACAGGCTGCTTCAAGTGAAGCTTACTCTCCCAATATTGAACCCTAAACCCTCCCAGATCGCGAAGCGCAAATTTAGACGAGTTTCCACCGGTAGATGGTGGCGGCCGCAATCAGAACACCATAAGCAGTTCCTATCATCTTGTACCATCCGATCGCTTCGATCTTCTTCGGAATTTTGAATTTGGTAACGATCATTGCAAGAGTGGCGCTTGCAAGCGAAAGGGCTGAAAAAGATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAGATCTTACACTCTATCATGATATTGTTGAACACATTCACCAGTTTGTTTATCATTTTTTGAAAACCTCTTTGTTTTGCTCTTTGGATTAGAGATGATGACCTGTTTATCTTTTGCATCAGTTTCTACAAATAAGATATGAGAGAGATTTTGGTGGACTTAATAATAAACCTTATTTCATGATTTATTAGTCTTTTGTGCATCATCAGAGCCAAAAGGCTATCCTGGAATTGTGCAATGCAGTGATGTTTATGGAGGGCATAGAGTATTTGTTATGATTTGCTAGACATTTGTGGATCCCTTCCAGCGTTCGACCTTGGTGGAGTGCTTGATTTGGTCAAATGAACATTGGTTGTGAAATCAATCCATATATTTCAATGCATACAATTTCTTTTCCCTATGGAATTATTGCTTAGCTCAGACGGGAGAAAATGTGAACTTTATTTGTGCATTTAGAACCAGAAATGTTAGCTGTTTGTCGAATTCTTCCTTGATTATGAAATGATGAACGATATATGCAGCACTTGTGTGTCGCTTTTGAGTGGTTTGGCTAAGAATCGTGTAACTCGATTGCAATCATGATAACCTAGAACAAAAATTGAAATTTGAATTGTCAAAGTTGTGAGGATTGTTTATTCGATTTT

Coding sequence (CDS)

ATGAGGCTACTTACACACAACATGCTCTCCTCCAACATCAAGGGCGTTGTCAATGGCTTCCCTCTCCGAATCGAAGTTGAGAAAGTTGTCGAGAAGCAGGTCGACTTCAACCCAGACTTCCTCAAGAACATGTTCTCCAAGATTGAATGGAAGCCCCTTGTCGATGCCTCTCGCACTATGGGCTATGCCGAACTTCCCGAGGAGGCGGAGTCGTCAATGCTCGATTCCCATGACTTTTTGCAACGATTCCACCATGCGCTTTTGGAGCTACATCTCGAGGAAGGCGCTCTTATTTGCCCGGAGACGGGCCGCCGATTCCCCGTCAATAAAGATTTTCTTACCGTCTTAAAACTAGAAAAGAAAATGGCTGCTGGAAGGGTAGCTCACGTCACGCTTAAAGGACCGAGTGTCGTCAAGGAGATATTGACTGGAATGGGAGTGGCTTTGTTTGCTGGTAGCTTTTGGAAAATGCATCAGTGGAATGAGCAGAGGAAAGTGAGAGCTTTCTATGATCTACTCGAGAAGGGTGAGATCGGTGTCGTTGTCGATGAAGAATAG

Protein sequence

MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTMGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEKKMAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE

Homology

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot
Match: Q8LFJ5 (Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thaliana OX=3702 GN=TRM112A PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.8e-41
Identity = 81/124 (65.32%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPETGR+FPVNK    +L  
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot
Match: Q9C9R3 (Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thaliana OX=3702 GN=TRM112B PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.9e-38
Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+K    +L  
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot
Match: Q9DCG9 (Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX=10090 GN=Trmt112 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 9.0e-24
Identity = 52/117 (44.44%), Postives = 77/117 (65.81%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW  LV A+ T
Sbjct: 1   MKLLTHNLLSSHVRGVGTRGFPLRLQATEVRINPVEFNPEFVARMIPKVEWAALVQAADT 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVL 117
           +  AE+P+E          FL++ HH LLE+ + EG L CPE+GR FP+++    +L
Sbjct: 61  LNLAEVPKEPTEGYEHDETFLRKMHHVLLEVDVLEGTLQCPESGRLFPISRGIPNML 117

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot
Match: Q2KIA2 (Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9913 GN=TRMT112 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.7e-22
Identity = 50/117 (42.74%), Postives = 78/117 (66.67%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           MRLLTHN+LSS+++GV   GFPLR++  +V    V+FNPDF+  M  K+EW  L++A+  
Sbjct: 1   MRLLTHNLLSSHVRGVGPRGFPLRLQATEVRINPVEFNPDFIVRMIPKVEWAALLEAADH 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVL 117
           +   ++P+E       + +FL++ HH LLE+ + EG L CPE+GR FP+++    +L
Sbjct: 61  LHLIQVPKEPIQGYEHNEEFLRKMHHVLLEVEVLEGTLQCPESGRVFPISRGIPNML 117

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot
Match: Q9UI30 (Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX=9606 GN=TRMT112 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.3e-21
Identity = 47/122 (38.52%), Postives = 79/122 (64.75%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGV-VNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRT 60
           M+LLTHN+LSS+++GV   GFPLR++  +V    V+FNP+F+  M  K+EW   ++A+  
Sbjct: 1   MKLLTHNLLSSHVRGVGSRGFPLRLQATEVRICPVEFNPNFVARMIPKVEWSAFLEAADN 60

Query: 61  MGYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLE 120
           +   ++P+       ++ +FL+  HH LLE+ + EG L CPE+GR FP+++    +L  E
Sbjct: 61  LRLIQVPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPISRGIPNMLLSE 120

Query: 121 KK 122
           ++
Sbjct: 121 EE 122

[Close]

BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: KAG6575770.1 (Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 348 bits (892), Expect = 1.70e-120
Identity = 175/185 (94.59%), Postives = 176/185 (95.14%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK        EK
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK--------EK 120

Query: 121 KMAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGV 180
           KMAAGRVAHVTL+GPSVVKEIL GMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGV
Sbjct: 121 KMAAGRVAHVTLQGPSVVKEILIGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGV 177

Query: 181 VVDEE 185
           VVDEE
Sbjct: 181 VVDEE 177

[Close]

BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: KAG7014318.1 (Multifunctional methyltransferase subunit TRM112-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 333 bits (855), Expect = 2.92e-114
Identity = 173/216 (80.09%), Postives = 176/216 (81.48%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDF+KNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFVKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVL---- 120
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICP TGRRFPVNK    +L    
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPGTGRRFPVNKGIPNLLLHED 120

Query: 121 ---------------------------KLEKKMAAGRVAHVTLKGPSVVKEILTGMGVAL 180
                                       +  KMAAGRVAHVTLKGPSVVKEIL GMGVAL
Sbjct: 121 EFPPIKSRRPHSEDHNSSYHLAPSGCFSISLKMAAGRVAHVTLKGPSVVKEILIGMGVAL 180

Query: 181 FAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE 185
           FAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE
Sbjct: 181 FAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVVVDEE 216

[Close]

BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: XP_023548932.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 227 bits (579), Expect = 1.31e-73
Identity = 112/122 (91.80%), Postives = 115/122 (94.26%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: XP_022991525.1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 [Cucurbita maxima])

HSP 1 Score: 225 bits (573), Expect = 1.07e-72
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESS LDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. NCBI nr
Match: KAG6575766.1 (Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 226 bits (576), Expect = 1.37e-72
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK 110
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK 110

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL
Match: A0A6J1JT67 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488115 PE=3 SV=1)

HSP 1 Score: 225 bits (573), Expect = 5.20e-73
Identity = 111/122 (90.98%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESS LDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL
Match: A0A6J1GPK5 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455975 PE=3 SV=1)

HSP 1 Score: 224 bits (572), Expect = 7.38e-73
Identity = 110/122 (90.16%), Postives = 114/122 (93.44%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLR+EVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRVEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAES MLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESLMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL
Match: A0A6J1JUC5 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucurbita maxima OX=3661 GN=LOC111487970 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 3.00e-72
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASR M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL
Match: A0A6J1GQW1 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucurbita moschata OX=3662 GN=LOC111456646 PE=3 SV=1)

HSP 1 Score: 223 bits (568), Expect = 3.00e-72
Identity = 110/122 (90.16%), Postives = 113/122 (92.62%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASR M
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRAM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKLEK 120
           GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPET RRFPVNK    +L  E 
Sbjct: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETARRFPVNKGIPNLLLHED 120

Query: 121 KM 122
           ++
Sbjct: 121 EV 122

[Close]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL
Match: A0A6J1JWG7 (multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488115 PE=3 SV=1)

HSP 1 Score: 224 bits (570), Expect = 4.15e-72
Identity = 109/110 (99.09%), Postives = 109/110 (99.09%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM
Sbjct: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60

Query: 61  GYAELPEEAESSMLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK 110
           GYAELPEEAESS LDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK
Sbjct: 61  GYAELPEEAESSKLDSHDFLQRFHHALLELHLEEGALICPETGRRFPVNK 110

[Close]

BLAST of Cp4.1LG12g06070 vs. TAIR 10
Match: AT1G22270.1 (Trm112p-like protein )

HSP 1 Score: 169.9 bits (429), Expect = 2.0e-42
Identity = 81/124 (65.32%), Postives = 105/124 (84.68%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+THNMLS NIKGV +GFPLRIE   V+EK+VDFNPDF+++MF+KIEWK LV+ +R+M
Sbjct: 1   MRLITHNMLSCNIKGVTSGFPLRIEAGNVIEKEVDFNPDFIRHMFAKIEWKALVEGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
           GYAELPEE+ ++++L S + FL++ HHALLELHLEEGAL+CPETGR+FPVNK    +L  
Sbjct: 61  GYAELPEESPDAAVLKSDEPFLKKLHHALLELHLEEGALVCPETGRKFPVNKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]

BLAST of Cp4.1LG12g06070 vs. TAIR 10
Match: AT1G78190.1 (Trm112p-like protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.5e-39
Identity = 78/124 (62.90%), Postives = 100/124 (80.65%), Query Frame = 0


Query: 1   MRLLTHNMLSSNIKGVVNGFPLRIEVEKVVEKQVDFNPDFLKNMFSKIEWKPLVDASRTM 60
           MRL+ HNMLS NIKGVVN FPLRIE EKV  K+VDFNPDFL+ MF+KI+WK LVD +R+M
Sbjct: 1   MRLIVHNMLSCNIKGVVNKFPLRIEAEKVTVKEVDFNPDFLRYMFAKIDWKALVDGARSM 60

Query: 61  GYAELPEEA-ESSMLDSHD-FLQRFHHALLELHLEEGALICPETGRRFPVNKDFLTVLKL 120
            Y ELP+ A +++ L+S + FL++FHHALLELHLEEG+L+CPETGR+F V+K    +L  
Sbjct: 61  EYTELPDNAPDTTTLESDETFLRKFHHALLELHLEEGSLVCPETGRKFSVSKGIPNMLLH 120

Query: 121 EKKM 123
           E ++
Sbjct: 121 EDEV 124

[Close]

BLAST of Cp4.1LG12g06070 vs. TAIR 10
Match: AT5G61310.1 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 122 MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 181
           MA  ++AH TLKGPSVVKE++ G+ + L AG  WKMH WNEQRK R FYDLLE+GEIGVV
Sbjct: 1   MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 182 VDEE 186
           V EE
Sbjct: 61  VTEE 64

[Close]

BLAST of Cp4.1LG12g06070 vs. TAIR 10
Match: AT5G61310.2 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 122 MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 181
           MA  ++AH TLKGPSVVKE++ G+ + L AG  WKMH WNEQRK R FYDLLE+GEIGVV
Sbjct: 1   MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 182 VDEE 186
           V EE
Sbjct: 61  VTEE 64

[Close]

BLAST of Cp4.1LG12g06070 vs. TAIR 10
Match: AT5G61310.3 (Cytochrome c oxidase subunit Vc family protein )

HSP 1 Score: 97.8 bits (242), Expect = 9.5e-21
Identity = 44/64 (68.75%), Postives = 51/64 (79.69%), Query Frame = 0


Query: 122 MAAGRVAHVTLKGPSVVKEILTGMGVALFAGSFWKMHQWNEQRKVRAFYDLLEKGEIGVV 181
           MA  ++AH TLKGPSVVKE++ G+ + L AG  WKMH WNEQRK R FYDLLE+GEIGVV
Sbjct: 1   MAGHKIAHATLKGPSVVKELVIGLTLGLAAGGLWKMHHWNEQRKTRVFYDLLERGEIGVV 60

Query: 182 VDEE 186
           V EE
Sbjct: 61  VTEE 64

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g06070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFJ5	2.8e-41	65.32	Multifunctional methyltransferase subunit TRM112 homolog A OS=Arabidopsis thalia...	[more]
Q9C9R3	4.9e-38	62.90	Multifunctional methyltransferase subunit TRM112 homolog B OS=Arabidopsis thalia...	[more]
Q9DCG9	9.0e-24	44.44	Multifunctional methyltransferase subunit TRM112-like protein OS=Mus musculus OX...	[more]
Q2KIA2	1.7e-22	42.74	Multifunctional methyltransferase subunit TRM112-like protein OS=Bos taurus OX=9...	[more]
Q9UI30	9.3e-21	38.52	Multifunctional methyltransferase subunit TRM112-like protein OS=Homo sapiens OX...	[more]

BLAST of Cp4.1LG12g06070 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6575770.1	1.70e-120	94.59	Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argy...	[more]
KAG7014318.1	2.92e-114	80.09	Multifunctional methyltransferase subunit TRM112-like protein, partial [Cucurbit...	[more]
XP_023548932.1	1.31e-73	91.80	multifunctional methyltransferase subunit TRM112-like protein At1g22270 [Cucurbi...	[more]
XP_022991525.1	1.07e-72	90.98	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
KAG6575766.1	1.37e-72	100.00	Multifunctional methyltransferase subunit TRM112-like B, partial [Cucurbita argy...	[more]

BLAST of Cp4.1LG12g06070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JT67	5.20e-73	90.98	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
A0A6J1GPK5	7.38e-73	90.16	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]
A0A6J1JUC5	3.00e-72	90.16	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucur...	[more]
A0A6J1GQW1	3.00e-72	90.16	multifunctional methyltransferase subunit TRM112-like protein At1g22270 OS=Cucur...	[more]
A0A6J1JWG7	4.15e-72	99.09	multifunctional methyltransferase subunit TRM112-like protein At1g22270 isoform ...	[more]

BLAST of Cp4.1LG12g06070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22270.1	2.0e-42	65.32	Trm112p-like protein	[more]
AT1G78190.1	3.5e-39	62.90	Trm112p-like protein	[more]
AT5G61310.1	9.5e-21	68.75	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.2	9.5e-21	68.75	Cytochrome c oxidase subunit Vc family protein	[more]
AT5G61310.3	9.5e-21	68.75	Cytochrome c oxidase subunit Vc family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.20.25.10		coord: 1..122 e-value: 2.3E-32 score: 113.8
None	No IPR available	PANTHER	PTHR12773:SF5	BNAA09G30730D PROTEIN	coord: 1..117
IPR005651	Trm112-like	PFAM	PF03966	Trm112p	coord: 3..110 e-value: 2.8E-14 score: 53.5
IPR039127	Multifunctional methyltransferase subunit Trm112	PANTHER	PTHR12773	UPF0315 PROTEIN-RELATED	coord: 1..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g06070.1	Cp4.1LG12g06070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018364	peptidyl-glutamine methylation
biological_process	GO:0070476	rRNA (guanine-N7)-methylation
biological_process	GO:0030488	tRNA methylation
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0046982	protein heterodimerization activity