Cp4.1LG12g05880 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g05880
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Syntaxin, putative
Location	Cp4.1LG12: 7883999 .. 7887646 (-)
RNA-Seq Expression	Cp4.1LG12g05880
Synteny	Cp4.1LG12g05880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACAAGGCCCGCCTGAATCCTGATCTGTTTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCGCGAAATTTCTTCATTCCGGGGGGAGTTGTTCAATGTTCGATTCGAACATTGAATTCTTCAATTCATTTCATTTTTACGCAGGAACTGACTCGAGTTTTTCGATTCTGATCATTCTTGAACTCTCTACTCACTGATTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGGTATAGAGTCTTTTTTTTTGTTCTAGCTTTTCTTCCAAAGTTCTTTTGCATTTTTCTTTTATTAAATTTGGTCTAGTAAGTGCATAAATTGCTTGTGCTGAATTATTTTCTTAGCGATGTGGAGTATCTGGATGGAAAATTGAACTTCTACTCTGACATTCAATTAAAAGATTTTTCTTATTTGCGTCAGTGAAGTTTTCTTGCATCAAACGCGTATTTGTGACTTCCTTTTTCTAGAGTAGTTCTGGTGAAATTTTGAAGAGCAGATAAGAAGACATCATCAACGCATTCTTGCCACCCCGCCCCCCATACCTACTTGGAGTTGAAGAATTGTAATTCTTCGAACTGCTTGACAAAATCATACCTCAGCAGGAAATGCCAATATAGGTTTCTTGACAATATTTCATTAATTAACTGAGTGAATGGTGTCAAGACTCGGATAGTGAAGGTTAATGAATTAAGTTTACCAAAATGTCCGGTACTGAGCATTGAAGGCACACATTTCAAATGGTTGATGATCATAGGGAGGTTTAACTTTTAACTTACAATGGATCTGCTTAGAATTTGAAGGTTTCTGTCTGAGTAATTTAGCAAAATATTAACTCGTACTCTCCTGACTGTAATATTGTATCTGAGGTGCAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGGTATGCTTGATTCTCACTAATTTTTTTTGCTTAATACTATGAATGATCCGACTTTGTATCTGAGTCATAGTTGGTCTTTTAGTAATTGCTTTCTGTTATTGCGTTTTTTCTATCTGTTGTTCTTTGTCGTTGGACCTTTTTTGTGCCACCGGGAAACTAATGTATGAAGTTCCTATAGACTTTTCACCTCCCTGAGAGTGTTTCTTGATTCTGGTTTTCAGGGTCTTTTAACAATTTGTTCCTTTTTGTGATGGATTGACTCCTTTTCTTAACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGTTTGTGCCCTGTGTTCAAACGGACCTATGAAAACTTTCTGAAAAAAAGAAGATTTCATCTGATTAGTTGGCTTGGTAGTTGGGGTATTTAAAATGAGTTTCATCTTTTTGTTCCCACCTTATAATTTTCTTGTACTTGTCACCAATCTATTAAAAATGTGTTAGATATAGTATGAAGAAACTTCTTTTCTGTTATGACAACTCTCTTCTCATTTCATTTGTTCATTCGTCTATCATTCTAGGATTATACTTTTCTTGGTAAAATCTGTAATTTGGTCAATAGTAAGTAATCTTTCGGGAGTCTCATCAATTGAAACAGTGTTATTTTTAGTGAGGTTTGATTACTTTTGTATTGCAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGTATGTGCTGATCTCTTTGGTTACCTGGGAATTTCAAGTCTGAACTTTTCTTATGCAAGGGATGATTTTTGAGAACTCGAAGCACAAATTAACATGTTATTTTTTTTAACTCCAAATGTTTTTTACTGTCAAATCTTTTTGGATGTTCCATGTTGATAAGTGGATATTGCTTCAGTGGTTGGTTTTGTTAATCATATGCCTGAGTTAAATGTCATATTGTTTTGGATGCTAGGATAGCATATTGCCATTTGATAATTCTTTTGGGTGTGGTTTTTATGATACAATATATCATTGTCTCTCACTTCTCCTTGATTGGTACTTCTGTGTGGGATCAGGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTATGGAAGGTTCTTGTATCGGAGTTGCGAGACGAACTATTCACAATGTGATAAATATAAGTCTTTTTATTATGTGTAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGTAAAGACCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNGTTTGTCAATCTGGGTTTACAATCAACTAATGAACGTTGTGATTTTATCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGTGATCCAAAAACTGAGATATCAAATAGTTCAAGAGTTTTGAGAATTGTATTTGTTTCCTCACCGTTCTCTACCATAATTTTTATCTCTCTTAAAAAATTATTAGAATTCATAGCCAAATTCCGAAATAAAAGGTTTCGAAAACCCATTGTATAAAGTAGATGAGTTCTTAGGTAAAAGTAATGTTTATAAACTTCTAAAACTAAATGATTATCAAATGTGAGCCGAATTCCCAAAATAAAAAACAATTTAAGTTTTTTCTTTCAAAACTAGGCATGGGTTTAGAAAACCCATCGTATAATTTGATAAGTTCTTAGGTAAAAGTAATGTTTATAAACTTCTCAACCTAAATGAGTCGAACATTTCATATTATTGGTGGTTTAATGATGATTTTGGTGAAAAGATAAGGGATGATGGTGGGATGTTTTGCCATCTGCAGGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGATAGAATATCTCAATTAGTTGAGTGTTTTGTTGAGAATT

mRNA sequence

CAACAAGGCCCGCCTGAATCCTGATCTGTTTACTTCCGGCGAAGGTTAACGTGTAAAACCTCCGCGAAATTTCTTCATTCCGGGGGGAGTTGTTCAATGTTCGATTCGAACATTGAATTCTTCAATTCATTTCATTTTTACGCAGGAACTGACTCGAGTTTTTCGATTCTGATCATTCTTGAACTCTCTACTCACTGATTTCTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTCTATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGATAGAATATCTCAATTAGTTGAGTGTTTTGTTGAGAATT

Coding sequence (CDS)

ATGGCGACGAGGAATCGAACTGCACAGTTTAGAAGGCACAGGGACGCCGTGAAGAGCGTCCGTGCGCCTTTATCTTCCTCGGCAGCTGGTTCGAGCGGACCGGTTATTGAGATGGTGAGTTCGTCTCTTCTTCGTTCAAAGCGCTCTTCAGATTACGCTCCTCTTAGCACAGAAGATCCAGGACCTTCGAGCAGTGATGCATTGATGGTGGGTCTGCCTCCAGCTTGGGTGGATGATTCTGAAGAAATAACTGTTAATATACACCAAATTCGTAGGAAGATGGCAGAGTTAGTCAAAGCTCATTCTAAAGCTTTAATGCCTTCTTTTGCTGATGGCAAAGAAGATCAGAATACGATTGAGGCGCTTACGCAAGAAATTACCAATCTTTTGAAAGCCTCTGAGAAGAGGTTGAAGAAAATTTCTAGTACTGGGTCTTCAGAGGATATTAGCATCAGAAAAAATGTACAGCGTTCTCTTGCTACAGAGCTTCAGAATCTTTCAATGGATCTTCGTAGAAGACAGTCAATGTATCTGAAACATCTGCAGCAGCAAAAGGAGGGGCATGATGGAATTGATTTGGAGATAAATTTGAATGGAAGCAGAACTCTACAGGATGATGACCGATATGATGAATTTGGAACCAATGAACACCAAACGATGACATTTGGAATGGATGCGCAGCACATTCAGGGAAGGGAGAAAGAGATTAAACAGGTTGTGAAGTCAGTGAATGAACTCGCCCAAATCATGAAGGATCTCTCAACCCTTGTTATAGACCAGGGTACCATTGTCGATAGAATTGACCACAATATTCAGAATGTTGCTGCTTCAGTTGAAGAGGGCTATAAGCAGCTTCAAAAGGTTCTCTCTCTTTCAAAGATCACTGTCATTTGCAGAGAAGAGTCAGAAGAATGGAGGAATGGTGAAGTGTGCAACGGTGCTTGTTATTATGTGTTTCATAATGCTGGTTCTGTTGATACTGAAGGAGATAATTATGTAACAAATGTTGCCCTTTGGCTTGTTGCTGATAAGGATTTTGACAACTGCATGCGGCTGGTAAGCTCTAAGCAGGTGCCGTTCCTTTCGTGTATTATTCTCAGAGTCTCGAATGTGTCATTGTTGAAATGA

Protein sequence

MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSKITVICREESEEWRNGEVCNGACYYVFHNAGSVDTEGDNYVTNVALWLVADKDFDNCMRLVSSKQVPFLSCIILRVSNVSLLK

Homology

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BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot
Match: Q9SWH4 (Syntaxin-42 OS=Arabidopsis thaliana OX=3702 GN=SYP42 PE=1 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 1.6e-91
Identity = 190/290 (65.52%), Postives = 228/290 (78.62%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGS-SGPVIEMVSSSLLRSKRSSDYAPLSTED 60
           MATRNRT  +R+HRDA KS RAPLS SA+ S  GPVIEMVS S  RS  SS YAPL++ D
Sbjct: 1   MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSS-YAPLNSYD 60

Query: 61  PGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTI 120
           PGPSSSDA  +G+PPAWVDDSEEIT NI ++R KM EL KAHSKALMP+F D K     +
Sbjct: 61  PGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREV 120

Query: 121 EALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLK 180
           E LT EIT+LL+ SEKRL+ +S+ G SE+ ++RKNVQRSLAT+LQNLSM+LRR+QS YLK
Sbjct: 121 EMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLK 180

Query: 181 HLQQQKEGHDGIDLEINLNGSRT-LQDDDRYDEFGTNEHQTMTFGMDAQHIQG-REKEIK 240
            LQQQKEG D +DLE N+NG  + L ++D     G +EHQT+    + QH+   RE+EI+
Sbjct: 181 RLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKL-KEGQHVSAEREREIQ 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           QV+ SVN+LAQIMKDLS LVIDQGTIVDRID+N+QNV+ SVEEGYKQLQK
Sbjct: 241 QVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQK 288

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot
Match: O65359 (Syntaxin-41 OS=Arabidopsis thaliana OX=3702 GN=SYP41 PE=1 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 4.7e-88
Identity = 188/292 (64.38%), Postives = 233/292 (79.79%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSA-----AGSSGPVIEMVSSSLLRSKRSSDYAPL 60
           MATRNRT  FR++R++++SVRAPLSSS+     +G  GPVIEM S+SLL   RS  YAP+
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRS--YAPI 60

Query: 61  STEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKED 120
           STEDPG SS  A+ VGLPPAWVD SEEI+VNI + R KMAEL KAH+KALMPSF DGKED
Sbjct: 61  STEDPGTSSKGAITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 120

Query: 121 QNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQS 180
           Q+ IE+LTQEIT LLK SEK+L+++S++G SED ++RKNVQRSLAT+LQ LSM+LR++QS
Sbjct: 121 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 180

Query: 181 MYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKE 240
            YLK L+QQKE  DG+DLE+NL+ +R   ++D + +   NEHQ        +    REKE
Sbjct: 181 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 240

Query: 241 IKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           I+QVV+SVN+LAQIMKDLS LVIDQGTIVDRID+NI+NVA +VE+G KQLQK
Sbjct: 241 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot
Match: Q9SUJ1 (Syntaxin-43 OS=Arabidopsis thaliana OX=3702 GN=SYP43 PE=2 SV=2)

HSP 1 Score: 320.9 bits (821), Expect = 2.0e-86
Identity = 189/321 (58.88%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSS-------------AAGSSGPVIEMVSSSLLRSK 60
           MATRNRT  FR++R++++SVRAP+ SS             A    GPVIEM S+SLL   
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60

Query: 61  RSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMP 120
           RS  YAP+STEDPG SS   + VGLPP WVD SEEI+V I + R KMAEL KAH+KALMP
Sbjct: 61  RS--YAPVSTEDPGNSSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 120

Query: 121 SFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLS 180
           SF DGKEDQ+ IE LTQE+T LLK SEK+L+++S+ G SED ++RKNVQRSLAT+LQNLS
Sbjct: 121 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 180

Query: 181 MDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQ 240
           M+LR++QS YLK L+ QKE  DG DLE+NLNGSR   +DD +D+   +EHQ        +
Sbjct: 181 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 240

Query: 241 HIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 299
               REKEI+QVV+SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA++V++G KQLQK
Sbjct: 241 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 300

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot
Match: O14662 (Syntaxin-16 OS=Homo sapiens OX=9606 GN=STX16 PE=1 SV=3)

HSP 1 Score: 116.7 bits (291), Expect = 5.7e-25
Identity = 92/300 (30.67%), Postives = 150/300 (50.00%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAG--SSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATR  T  F   R+     R  L+   +   +S P+     ++ L        A +S  
Sbjct: 1   MATRRLTDAFLLLRNNSIQNRQLLAEQVSSHITSSPLHSRSIAAELDELADDRMALVSGI 60

Query: 61  DPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKAL-MPSFADGKEDQN 120
              P ++  +    PP WVD  +EI  ++ +I++KM EL   H K L  P+  D  E+++
Sbjct: 61  SLDPEAAIGVTKRPPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTG---SSEDISIRKNVQRSLATELQNLSMDLRRRQ 180
            IE  TQEIT L    ++ ++ + S     S ++  +  NV  SLA  LQ LS   R  Q
Sbjct: 121 AIEITTQEITQLFHRCQRAVQALPSRARACSEQEGRLLGNVVASLAQALQELSTSFRHAQ 180

Query: 181 SMYLKHLQQQKE-GHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGRE 240
           S YLK ++ ++E      D  + L       DD+     G  E Q +    +   ++ RE
Sbjct: 181 SGYLKRMKNREERSQHFFDTSVPLMDD---GDDNTLYHRGFTEDQLVLVEQNTLMVEERE 240

Query: 241 KEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 294
           +EI+Q+V+S+++L +I +DL  ++++QGT++DRID+N++      E+G KQL K     K
Sbjct: 241 REIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQK 297

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot
Match: Q8BVI5 (Syntaxin-16 OS=Mus musculus OX=10090 GN=Stx16 PE=1 SV=3)

HSP 1 Score: 116.3 bits (290), Expect = 7.4e-25
Identity = 91/301 (30.23%), Postives = 151/301 (50.17%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSS--SAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTE 60
           MATR  T  F   R+     R  L+   S+  +S P+     ++ L        A +S  
Sbjct: 1   MATRRLTDAFLLLRNNSIQTRQLLAEQVSSHTTSSPLHSRSIAAELDELADDRMALVSGI 60

Query: 61  DPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKAL-MPSFADGKEDQN 120
              P ++  +    PP WVD  +EI  ++ +I++KM EL   H K L  P+  D  E+++
Sbjct: 61  SLDPEAAIGVTKRSPPKWVDGVDEIQYDVGRIKQKMKELASLHDKHLNRPTLDDSSEEEH 120

Query: 121 TIEALTQEITNLLKASEKRLKKISSTG----SSEDISIRKNVQRSLATELQNLSMDLRRR 180
            IE  TQE+T L    ++ ++ + S      S ++  + +NV  SLA  LQ LS   R  
Sbjct: 121 AIEITTQEVTQLFHRCQRAVQALPSRARRACSEQEERLLRNVVASLAQALQELSTSFRHA 180

Query: 181 QSMYLKHLQQQKE-GHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGR 240
           QS YLK ++ ++E      D  + L       DD      G  + Q +    +   ++ R
Sbjct: 181 QSDYLKRMKNREERSQHFFDTPVPLMDD---GDDATLYGQGFTDDQLVLVEQNTLMVEER 240

Query: 241 EKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLS 294
           E+EI+Q+V+S+++L +I +DL  ++++QGT++DRID+N++      E+G KQL K     
Sbjct: 241 EREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCVKTEDGLKQLHKAEQYQ 298

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: XP_023548705.1 (syntaxin-42-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 534 bits (1375), Expect = 1.53e-188
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: KAG7014339.1 (Syntaxin-42, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 529 bits (1362), Expect = 1.46e-186
Identity = 283/287 (98.61%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK++S TGSSEDI IRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRVSCTGSSEDIGIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: XP_022953999.1 (syntaxin-41-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 528 bits (1361), Expect = 2.07e-186
Identity = 284/287 (98.95%), Postives = 286/287 (99.65%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRR+RDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRYRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: XP_023548706.1 (syntaxin-42-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528 bits (1359), Expect = 4.03e-186
Identity = 286/287 (99.65%), Postives = 286/287 (99.65%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSS DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSS-DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 286

[Close]

BLAST of Cp4.1LG12g05880 vs. NCBI nr
Match: KAG6575798.1 (Syntaxin-42, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 527 bits (1357), Expect = 8.43e-186
Identity = 283/287 (98.61%), Postives = 284/287 (98.95%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDI IR NVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDIGIRTNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL
Match: A0A6J1GRK4 (syntaxin-41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 SV=1)

HSP 1 Score: 528 bits (1361), Expect = 1.00e-186
Identity = 284/287 (98.95%), Postives = 286/287 (99.65%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRR+RDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRYRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL
Match: A0A6J1GR78 (syntaxin-41-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 SV=1)

HSP 1 Score: 522 bits (1345), Expect = 2.64e-184
Identity = 283/287 (98.61%), Postives = 285/287 (99.30%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRR+RDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP
Sbjct: 1   MATRNRTAQFRRYRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSS DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSS-DALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 286

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL
Match: A0A6J1JL77 (syntaxin-42-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=1)

HSP 1 Score: 522 bits (1344), Expect = 3.89e-184
Identity = 281/287 (97.91%), Postives = 283/287 (98.61%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPL SSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLYSSAAGSSGPVIEMVSSSLLRSKRSSAYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDALMV LPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSSSDALMVSLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDISIRKNVQRSLATELQNLS+DLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDISIRKNVQRSLATELQNLSLDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL
Match: A0A6J1JVK5 (syntaxin-42-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=1)

HSP 1 Score: 516 bits (1328), Expect = 1.02e-181
Identity = 280/287 (97.56%), Postives = 282/287 (98.26%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPL SSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLYSSAAGSSGPVIEMVSSSLLRSKRSSAYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSS DALMV LPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE
Sbjct: 61  GPSS-DALMVSLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALTQEITNLLKASEKRLK+IS TGSSEDISIRKNVQRSLATELQNLS+DLRRRQSMYLKH
Sbjct: 121 ALTQEITNLLKASEKRLKRISCTGSSEDISIRKNVQRSLATELQNLSLDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 287
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 286

[Close]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL
Match: A0A1S3BSG2 (syntaxin-42 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492782 PE=3 SV=1)

HSP 1 Score: 491 bits (1263), Expect = 7.64e-172
Identity = 268/293 (91.47%), Postives = 276/293 (94.20%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSDYAPLSTEDP 60
           MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSS YAPLSTEDP
Sbjct: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGSSGPVIEMVSSSLLRSKRSSSYAPLSTEDP 60

Query: 61  GPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTIE 120
           GPSSSDA MVGLPPAWVDDSEEITVNI +IRRKMAELVKAHSKALMPSFADGKED++TIE
Sbjct: 61  GPSSSDAFMVGLPPAWVDDSEEITVNIQKIRRKMAELVKAHSKALMPSFADGKEDEHTIE 120

Query: 121 ALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180
           ALT EITNLLK SEKRLKKISSTGSSEDI+IRKNVQRSLATELQNLSMDLRRRQSMYLKH
Sbjct: 121 ALTLEITNLLKTSEKRLKKISSTGSSEDINIRKNVQRSLATELQNLSMDLRRRQSMYLKH 180

Query: 181 LQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKEIKQVV 240
           LQQQKEGHDGIDLEINLNG+RT Q+DD YDEFGTNE+QTMT  +D QHIQGREKEIKQVV
Sbjct: 181 LQQQKEGHDGIDLEINLNGNRTFQEDDGYDEFGTNENQTMT--LDGQHIQGREKEIKQVV 240

Query: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQKVLSLSK 293
           KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVA SVEEG KQLQK     K
Sbjct: 241 KSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAVSVEEGLKQLQKAEKTQK 291

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR 10
Match: AT4G02195.1 (syntaxin of plants 42 )

HSP 1 Score: 337.8 bits (865), Expect = 1.1e-92
Identity = 190/290 (65.52%), Postives = 228/290 (78.62%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSAAGS-SGPVIEMVSSSLLRSKRSSDYAPLSTED 60
           MATRNRT  +R+HRDA KS RAPLS SA+ S  GPVIEMVS S  RS  SS YAPL++ D
Sbjct: 1   MATRNRTTVYRKHRDACKSARAPLSLSASDSFGGPVIEMVSGSFSRSNHSS-YAPLNSYD 60

Query: 61  PGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKEDQNTI 120
           PGPSSSDA  +G+PPAWVDDSEEIT NI ++R KM EL KAHSKALMP+F D K     +
Sbjct: 61  PGPSSSDAFTIGMPPAWVDDSEEITFNIQKVRDKMNELAKAHSKALMPTFGDNKGIHREV 120

Query: 121 EALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQSMYLK 180
           E LT EIT+LL+ SEKRL+ +S+ G SE+ ++RKNVQRSLAT+LQNLSM+LRR+QS YLK
Sbjct: 121 EMLTHEITDLLRKSEKRLQMLSTRGPSEESNLRKNVQRSLATDLQNLSMELRRKQSTYLK 180

Query: 181 HLQQQKEGHDGIDLEINLNGSRT-LQDDDRYDEFGTNEHQTMTFGMDAQHIQG-REKEIK 240
            LQQQKEG D +DLE N+NG  + L ++D     G +EHQT+    + QH+   RE+EI+
Sbjct: 181 RLQQQKEGQDEVDLEFNVNGKMSRLDEEDELGGMGFDEHQTIKL-KEGQHVSAEREREIQ 240

Query: 241 QVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           QV+ SVN+LAQIMKDLS LVIDQGTIVDRID+N+QNV+ SVEEGYKQLQK
Sbjct: 241 QVLGSVNDLAQIMKDLSALVIDQGTIVDRIDYNVQNVSTSVEEGYKQLQK 288

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR 10
Match: AT5G26980.1 (syntaxin of plants 41 )

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-89
Identity = 188/292 (64.38%), Postives = 233/292 (79.79%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSA-----AGSSGPVIEMVSSSLLRSKRSSDYAPL 60
           MATRNRT  FR++R++++SVRAPLSSS+     +G  GPVIEM S+SLL   RS  YAP+
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRS--YAPI 60

Query: 61  STEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKED 120
           STEDPG SS  A+ VGLPPAWVD SEEI+VNI + R KMAEL KAH+KALMPSF DGKED
Sbjct: 61  STEDPGTSSKGAITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 120

Query: 121 QNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQS 180
           Q+ IE+LTQEIT LLK SEK+L+++S++G SED ++RKNVQRSLAT+LQ LSM+LR++QS
Sbjct: 121 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 180

Query: 181 MYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKE 240
            YLK L+QQKE  DG+DLE+NL+ +R   ++D + +   NEHQ        +    REKE
Sbjct: 181 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 240

Query: 241 IKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           I+QVV+SVN+LAQIMKDLS LVIDQGTIVDRID+NI+NVA +VE+G KQLQK
Sbjct: 241 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR 10
Match: AT5G26980.2 (syntaxin of plants 41 )

HSP 1 Score: 326.2 bits (835), Expect = 3.3e-89
Identity = 188/292 (64.38%), Postives = 233/292 (79.79%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSSA-----AGSSGPVIEMVSSSLLRSKRSSDYAPL 60
           MATRNRT  FR++R++++SVRAPLSSS+     +G  GPVIEM S+SLL   RS  YAP+
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPLSSSSLTGTRSGGVGPVIEMASTSLLNPNRS--YAPI 60

Query: 61  STEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMPSFADGKED 120
           STEDPG SS  A+ VGLPPAWVD SEEI+VNI + R KMAEL KAH+KALMPSF DGKED
Sbjct: 61  STEDPGTSSKGAITVGLPPAWVDVSEEISVNIQRARTKMAELGKAHAKALMPSFGDGKED 120

Query: 121 QNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLSMDLRRRQS 180
           Q+ IE+LTQEIT LLK SEK+L+++S++G SED ++RKNVQRSLAT+LQ LSM+LR++QS
Sbjct: 121 QHNIESLTQEITFLLKKSEKQLQRLSASGPSEDSNVRKNVQRSLATDLQLLSMELRKKQS 180

Query: 181 MYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQHIQGREKE 240
            YLK L+QQKE  DG+DLE+NL+ +R   ++D + +   NEHQ        +    REKE
Sbjct: 181 TYLKRLRQQKE--DGMDLEMNLSRNRYRPEEDDFGDM-LNEHQMSKIKKSEEVSVEREKE 240

Query: 241 IKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 288
           I+QVV+SVN+LAQIMKDLS LVIDQGTIVDRID+NI+NVA +VE+G KQLQK
Sbjct: 241 IQQVVESVNDLAQIMKDLSALVIDQGTIVDRIDYNIENVATTVEDGLKQLQK 287

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR 10
Match: AT3G05710.2 (syntaxin of plants 43 )

HSP 1 Score: 320.9 bits (821), Expect = 1.4e-87
Identity = 189/321 (58.88%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSS-------------AAGSSGPVIEMVSSSLLRSK 60
           MATRNRT  FR++R++++SVRAP+ SS             A    GPVIEM S+SLL   
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60

Query: 61  RSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMP 120
           RS  YAP+STEDPG SS   + VGLPP WVD SEEI+V I + R KMAEL KAH+KALMP
Sbjct: 61  RS--YAPVSTEDPGNSSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 120

Query: 121 SFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLS 180
           SF DGKEDQ+ IE LTQE+T LLK SEK+L+++S+ G SED ++RKNVQRSLAT+LQNLS
Sbjct: 121 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 180

Query: 181 MDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQ 240
           M+LR++QS YLK L+ QKE  DG DLE+NLNGSR   +DD +D+   +EHQ        +
Sbjct: 181 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 240

Query: 241 HIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 299
               REKEI+QVV+SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA++V++G KQLQK
Sbjct: 241 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 300

[Close]

BLAST of Cp4.1LG12g05880 vs. TAIR 10
Match: AT3G05710.1 (syntaxin of plants 43 )

HSP 1 Score: 316.2 bits (809), Expect = 3.5e-86
Identity = 188/321 (58.57%), Postives = 234/321 (72.90%), Query Frame = 0


Query: 1   MATRNRTAQFRRHRDAVKSVRAPLSSS-------------AAGSSGPVIEMVSSSLLRSK 60
           MATRNRT  FR++R++++SVRAP+ SS             A    GPVIEM S+SLL   
Sbjct: 1   MATRNRTLLFRKYRNSLRSVRAPMGSSSSSTLTEHNSLTGAKSGLGPVIEMASTSLLNPN 60

Query: 61  RSSDYAPLSTEDPGPSSSDALMVGLPPAWVDDSEEITVNIHQIRRKMAELVKAHSKALMP 120
           RS  YAP+STEDPG +S   + VGLPP WVD SEEI+V I + R KMAEL KAH+KALMP
Sbjct: 61  RS--YAPVSTEDPG-NSRGTITVGLPPDWVDVSEEISVYIQRARTKMAELGKAHAKALMP 120

Query: 121 SFADGKEDQNTIEALTQEITNLLKASEKRLKKISSTGSSEDISIRKNVQRSLATELQNLS 180
           SF DGKEDQ+ IE LTQE+T LLK SEK+L+++S+ G SED ++RKNVQRSLAT+LQNLS
Sbjct: 121 SFGDGKEDQHQIETLTQEVTFLLKKSEKQLQRLSAAGPSEDSNVRKNVQRSLATDLQNLS 180

Query: 181 MDLRRRQSMYLKHLQQQKEGHDGIDLEINLNGSRTLQDDDRYDEFGTNEHQTMTFGMDAQ 240
           M+LR++QS YLK L+ QKE  DG DLE+NLNGSR   +DD +D+   +EHQ        +
Sbjct: 181 MELRKKQSTYLKRLRLQKE--DGADLEMNLNGSRYKAEDDDFDDMVFSEHQMSKIKKSEE 240

Query: 241 HIQGREKEIKQVVKSVNELAQIMKDLSTLVIDQGTIVDRIDHNIQNVAASVEEGYKQLQK 299
               REKEI+QVV+SV+ELAQIMKDLS LVIDQGTIVDRID+NIQNVA++V++G KQLQK
Sbjct: 241 ISIEREKEIQQVVESVSELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVDDGLKQLQK 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g05880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SWH4	1.6e-91	65.52	Syntaxin-42 OS=Arabidopsis thaliana OX=3702 GN=SYP42 PE=1 SV=1	[more]
O65359	4.7e-88	64.38	Syntaxin-41 OS=Arabidopsis thaliana OX=3702 GN=SYP41 PE=1 SV=1	[more]
Q9SUJ1	2.0e-86	58.88	Syntaxin-43 OS=Arabidopsis thaliana OX=3702 GN=SYP43 PE=2 SV=2	[more]
O14662	5.7e-25	30.67	Syntaxin-16 OS=Homo sapiens OX=9606 GN=STX16 PE=1 SV=3	[more]
Q8BVI5	7.4e-25	30.23	Syntaxin-16 OS=Mus musculus OX=10090 GN=Stx16 PE=1 SV=3	[more]

BLAST of Cp4.1LG12g05880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023548705.1	1.53e-188	100.00	syntaxin-42-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7014339.1	1.46e-186	98.61	Syntaxin-42, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022953999.1	2.07e-186	98.95	syntaxin-41-like isoform X1 [Cucurbita moschata]	[more]
XP_023548706.1	4.03e-186	99.65	syntaxin-42-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
KAG6575798.1	8.43e-186	98.61	Syntaxin-42, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG12g05880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GRK4	1.00e-186	98.95	syntaxin-41-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 S...	[more]
A0A6J1GR78	2.64e-184	98.61	syntaxin-41-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456390 PE=3 S...	[more]
A0A6J1JL77	3.89e-184	97.91	syntaxin-42-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=...	[more]
A0A6J1JVK5	1.02e-181	97.56	syntaxin-42-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487948 PE=3 SV=...	[more]
A0A1S3BSG2	7.64e-172	91.47	syntaxin-42 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492782 PE=3 SV=1	[more]

BLAST of Cp4.1LG12g05880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02195.1	1.1e-92	65.52	syntaxin of plants 42	[more]
AT5G26980.1	3.3e-89	64.38	syntaxin of plants 41	[more]
AT5G26980.2	3.3e-89	64.38	syntaxin of plants 41	[more]
AT3G05710.2	1.4e-87	58.88	syntaxin of plants 43	[more]
AT3G05710.1	3.5e-86	58.57	syntaxin of plants 43	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006011	Syntaxin, N-terminal domain	SMART	SM00503	SynN_4	coord: 67..182 e-value: 2.2E-16 score: 70.5
IPR000727	Target SNARE coiled-coil homology domain	SMART	SM00397	tSNARE_6	coord: 221..288 e-value: 2.3E-11 score: 53.8
IPR000727	Target SNARE coiled-coil homology domain	PROSITE	PS50192	T_SNARE	coord: 226..288 score: 17.19388
None	No IPR available	GENE3D	1.20.58.70		coord: 73..280 e-value: 3.4E-45 score: 156.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR19957:SF249	SYNTAXIN OF PLANTS PROTEIN	coord: 1..318
None	No IPR available	PANTHER	PTHR19957	SYNTAXIN	coord: 1..318
None	No IPR available	CDD	cd15845	SNARE_syntaxin16	coord: 229..287 e-value: 2.96835E-26 score: 97.5294
IPR006012	Syntaxin/epimorphin, conserved site	PROSITE	PS00914	SYNTAXIN	coord: 232..271
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 72..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g05880.1	Cp4.1LG12g05880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0048278	vesicle docking
biological_process	GO:0006906	vesicle fusion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0012505	endomembrane system
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031201	SNARE complex
cellular_component	GO:0016020	membrane
molecular_function	GO:0005484	SNAP receptor activity
molecular_function	GO:0000149	SNARE binding