Cp4.1LG12g05710 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG12g05710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	exopolygalacturonase-like
Location	Cp4.1LG12: 7933419 .. 7935266 (-)
RNA-Seq Expression	Cp4.1LG12g05710
Synteny	Cp4.1LG12g05710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCAAACAAAACATTCTCGTTTACCATTTGTGCTTCCAAATTAAGACATTGCACCATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGTGAATCATAAACTTCAATCTTTTAATTTCGGAAAGAAAAAAAAAATTAAACATTTGATTTTCCACGTGGCAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGTAACTATAATTATGCATAATTCAATCACTTCTTATTTTAATAATAAATTAATTGTATTTAATTAATTAATTAATTTATTTATTTATTTTTGTGTAGTCGATTAAATTCTCGAAAGTGAACCATTCAATTGTTGATGGGCTGACTTCAATTAACAGCAAGGGCTTTCACACGACGGTGTTCAGATGCTACAATTTCACCGCAACCAACATGAACATTATGGCTCCGGGAAACAGCCCCAATACCGATGGAATGCACCTTAGCACCTCAACATTGATCAGCATCTCTAACAGCGTCATTGGCACCGGTGACGATTGTGTCTCTATTGGCCATAGTTGTGAGAAAGTCACCGTCACCAATATCACTTGTGGCCCTGGACATGGCATCAGTGTCGGTAGCTTGGGCAAGTATAAAACAGAGAGGAGTGTGTCGGACATTTTGGTGCAAAATTGCACCCTTTTCAACACCACCAATGGTGTCAGAATCAAGACATGGGCGGGCATGGTGACGGGGTCGGCCACGAGAATAACCTTCGACAACATTGTGATGGATAAAGTTAAAAACCCCATAATCATTGATCAAACCTACGGCACCAAGAAGAACAAGGTAACCACAACAAAAATGTTCTCTCCATGGTTTTGGTCTGAACTTCTTATTTTTTATTTATAAATCCAAGATCATTCTCTAAATTGGGGAATTTAAGAACTACAACTAATCTATGTAGGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAACATTAGTGTTCTTTTTTTACGTTGGATCCTTCGACCTTGGTGTCGTGTTTGGTTAGTGTTGACGGCCAAGCTTTCTTCATATAGTATTCCATTGTAAAATTGATTAAATTTAATCAATTTATAAAATCTCTCCTGAGATTATTAGTTTAATTTTACCTATATTTGAACTTGAATGCCACTG

mRNA sequence

AATCAAACAAAACATTCTCGTTTACCATTTGTGCTTCCAAATTAAGACATTGCACCATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAACATTAGTGTTCTTTTTTTACGTTGGATCCTTCGACCTTGGTGTCGTGTTTGGTTAGTGTTGACGGCCAAGCTTTCTTCATATAGTATTCCATTGTAAAATTGATTAAATTTAATCAATTTATAAAATCTCTCCTGAGATTATTAGTTTAATTTTACCTATATTTGAACTTGAATGCCACTG

Coding sequence (CDS)

ATGACAACCACAAGAAATCTTAGACTCTTTCAAACCCTTCTCTGTGTATTTTCTTGGCAATGCTGTGCAAATTTGGCTGCCATTCCGGACGACGTTACAGGCGCTGCGAATCGCATGGACGGCATCGGAACTCTGGCAAACACCGGCGGCAGTGTGGCAACAGATGACATGAAGGCGGCTGTTGATCAGAATGGGAATGGTGATGGAGTTTTTAATGTTAAAAATTATGGAGCAAAAGCTAATGGAAAGACCGATGATGCACAGGCATTCATGACGACGTGGATTGCAGCATGCCGGAACACGTCCGGTCCGGCGACGTTTTTAATCCCAGAAGGCACATTTCTGGTGGGTCCGTTGGTTTTCGCCGGTCCGTGCCAAAGCAGGCCGATCACCGTCGAAATTCAGGGAACTGTGAAGGCCACAACCGATATTACTCAATATTCTACAACTGAATGGATCTCCATCGAAGACATAATCGGCTTCATACTCACCGGCTCCGGCGTCTTTGACGGCCAAGGCCCCGCCGCGTGGCCCTACAATGACTGCAAGACCAACAACAAGTGCCAGGCTCTTCCAAACGCTTCGAAATGGAAGATCAGCGACATTCACTTCAAGAACATTCGCGGGACGTCGACGACGAACGTGGCAGTGTTGTTGGAGTGCAGCGAGTTGTTTCCATGCGAGGGGGTGGAGCTTAGGGACATAAACTTGTCTTACGGTGGGGCCAGCTTGAGGAATACGACCACTGTTTCTTCATGTTTAAATGCAAAGATCACAACTTCTGGCGTGCAGAACCCGCCGGCTTGTGCTGTATAA

Protein sequence

MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTTVSSCLNAKITTSGVQNPPACAV

Homology

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot
Match: P35339 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.2e-26
Identity = 64/176 (36.36%), Postives = 96/176 (54.55%), Query Frame = 0


Query: 69  GVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSR 128
           G F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVGPL F GPC+  
Sbjct: 39  GSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGPLNFTGPCKG- 98

Query: 129 PITVEIQGTVKATTDITQYST-TEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNK 188
            +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W  N C     
Sbjct: 99  DVTIQVNGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCVKKYD 158

Query: 189 CQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 244
           C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+N++  G S
Sbjct: 159 CKILPNS--LVMDFVNNGEVSGITLLNSKFF--HMNMYKCKDMLIKDVNVTAPGDS 208

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot
Match: P35338 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 9.1e-25
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 61  VDQNGNG-DGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPL 120
           +D   +G  G F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVG L
Sbjct: 30  IDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGQL 89

Query: 121 VFAGPCQSRPITVEIQGTVKATTDITQYST-TEWISIEDIIGFILTGSGVFDGQGPAAWP 180
            F GPC+   +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W 
Sbjct: 90  NFTGPCKG-DVTIQVDGNLLATTDLSQYKEHGNWIEILRVDNLVITGKGNLDGQGPAVWS 149

Query: 181 YNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLS 240
            N C     C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+ ++
Sbjct: 150 KNSCTKKYDCKILPNS--LVMDFVNNGEVSGVTLLNSKFF--HMNMYQCKNMLIKDVTVT 208

Query: 241 YGGAS 244
             G S
Sbjct: 210 APGDS 208

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot
Match: P49062 (Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 64  NGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAG 123
           N     V+++  +GA  +G T+  +AF+ TWI  C ++  PAT L+P+GTFL GP++FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC-DSPVPATLLVPKGTFLAGPVIFAG 104

Query: 124 PCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCK 183
           PC+S+ +TV + GT+ ATT  + Y+T EW   E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKSK-VTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 184 TNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 243
              +C   P + K++    + KN+     ++V        L   E V +++I L+   A 
Sbjct: 165 KKVQCNLPPTSLKFR----NMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLT-APAE 224

Query: 244 LRNTTTV--SSCLNAKITTSGVQNPPAC 270
             NT  +  S+  N  I  S +     C
Sbjct: 225 SPNTDGIHLSNADNVSILDSTIATGDDC 243

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot
Match: P26216 (Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.6e-24
Identity = 64/185 (34.59%), Postives = 98/185 (52.97%), Query Frame = 0


Query: 61  VDQNGNG-DGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPL 120
           +D   +G  G F++   GA  NGKTD  +A    W +AC  T G  T LIP+G FLVG L
Sbjct: 30  IDAKASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGT-GKQTILIPKGDFLVGQL 89

Query: 121 VFAGPCQSRPITVEIQGTVKATTDITQYST-TEWISIEDIIGFILTGSGVFDGQGPAAWP 180
            F GPC+   +T+++ G + ATTD++QY     WI I  +   ++TG G  DGQGPA W 
Sbjct: 90  NFTGPCKG-DVTIQVDGNLLATTDLSQYKDHGNWIEILRVDNLVITGKGNLDGQGPAVWS 149

Query: 181 YNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLS 240
            N C     C+ LPN+    +  ++   + G +  N         ++ C+ + ++D+ ++
Sbjct: 150 KNSCTKKYDCKILPNS--LVMDFVNNGEVSGVTLLNSKFF--HMNMYRCKDMLIKDVTVT 208

Query: 241 YGGAS 244
             G S
Sbjct: 210 APGDS 208

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot
Match: P49063 (Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 PE=2 SV=2)

HSP 1 Score: 102.4 bits (254), Expect = 8.0e-21
Identity = 74/226 (32.74%), Postives = 105/226 (46.46%), Query Frame = 0


Query: 23  ANLAAIPDDVTGAANRMDGIGTLANT--GGSVATDDMKAAVDQNGNGDGVFNVKNYGAKA 82
           AN   + D    AA  ++     A T  GG+ A+   K +  + G      +VK  GAK 
Sbjct: 23  ANGTPVVDKAKNAATAVEDTAKNAATAVGGAAASVGAKVSGAKPG---AAVDVKASGAKG 82

Query: 83  NGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKA 142
           + KTDD+ AF   W  AC   +  +T  +P+G ++V  L F GPC+  P+T+E+ G  KA
Sbjct: 83  DSKTDDSAAFAAAWKEAC---AAGSTITVPKGEYMVESLEFKGPCKG-PVTLELNGNFKA 142

Query: 143 TTDI-TQYSTTEWISIEDIIGFILTGS-GVFDGQGPAAWPYNDCKTNNKCQALPNASKWK 202
              + T      WI  E+I  F L G+  +FDGQG  AW  NDC    KC +LP      
Sbjct: 143 PATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLP----IN 202

Query: 203 ISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASL 245
           I      N +  S T+    L    +  C+ + L DI +     SL
Sbjct: 203 IRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESL 237

[Close]

BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: KAG7014350.1 (Exopolygalacturonase-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 457 bits (1175), Expect = 4.34e-158
Identity = 259/438 (59.13%), Postives = 262/438 (59.82%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGIGTLANTGGSVATDDMKAA 60
           MTTTRNLRLFQTLLCVFSWQ CANLAAIPDDVTGAANRMDGIGTLANTGGSVATDDMKAA
Sbjct: 1   MTTTRNLRLFQTLLCVFSWQYCANLAAIPDDVTGAANRMDGIGTLANTGGSVATDDMKAA 60

Query: 61  VDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLV 120
           VDQNGNGD VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPA FLIPEGTFLVGPLV
Sbjct: 61  VDQNGNGDAVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPAKFLIPEGTFLVGPLV 120

Query: 121 FAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYN 180
           FAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYN
Sbjct: 121 FAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYN 180

Query: 181 DCKTNNKCQALPN----------------------------------------------- 240
           DCKTN+KCQALPN                                               
Sbjct: 181 DCKTNSKCQALPNSIKFSKVNHSIVDGLTSINSKGFHTTVFRCYNFTATNMNIMAPGNSP 240

Query: 241 ------------------------------------------------------------ 269
                                                                       
Sbjct: 241 NTDGMHLSTSTLISISNSVIGTGDDCVSIGHSCEKVTVTNITCGPGHGISVGSLGKYKTE 300

[Close]

BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: KAG6575808.1 (Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 391 bits (1005), Expect = 7.89e-133
Identity = 226/400 (56.50%), Postives = 227/400 (56.75%), Query Frame = 0


Query: 39  MDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAAC 98
           MDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAAC
Sbjct: 1   MDGIGTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAAC 60

Query: 99  RNTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDI 158
           RNTSGPA FLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDI
Sbjct: 61  RNTSGPAKFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDI 120

Query: 159 IGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN------------------------- 218
           IGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN                         
Sbjct: 121 IGFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPNSIKFSKVNHSIVDGLTSINSKGFHT 180

Query: 219 ------------------------------------------------------------ 269
                                                                       
Sbjct: 181 TVFRCYNFTATNMNIMAPGNSPNTDGMHLSTSTLISISNSVIGTGDDCVSIGHSCEKVTV 240

[Close]

BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: XP_023548983.1 (exopolygalacturonase clone GBGE184-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370 bits (951), Expect = 7.01e-125
Identity = 215/384 (55.99%), Postives = 215/384 (55.99%), Query Frame = 0


Query: 57  MKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLV 116
           MKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLV
Sbjct: 1   MKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLV 60

Query: 117 GPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAA 176
           GPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAA
Sbjct: 61  GPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAA 120

Query: 177 WPYNDCKTNNKCQALPN------------------------------------------- 236
           WPYNDCKTNNKCQALPN                                           
Sbjct: 121 WPYNDCKTNNKCQALPNSIKFSKVNHSIVDGLTSINSKGFHTTVFRCYNFTATNMNIMAP 180

Query: 237 ------------------------------------------------------------ 271
                                                                       
Sbjct: 181 GNSPNTDGMHLSTSTLISISNSVIGTGDDCVSIGHSCEKVTVTNITCGPGHGISVGSLGK 240

[Close]

BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: KAG7014351.1 (Exopolygalacturonase-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 358 bits (918), Expect = 8.55e-119
Identity = 219/461 (47.51%), Postives = 240/461 (52.06%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI------------------ 60
           MTTT NL LFQTLL V + QCCA +AA+ D V  AAN +DGI                  
Sbjct: 1   MTTTTNLSLFQTLLLVLACQCCAEVAAVFDHVKVAANPIDGIVSTANQQHRPPAPPLPLG 60

Query: 61  -GTLANTGGSVATDDMKAAVDQNGNGDG--VFNVKNYGAKANGKTDDAQAFMTTWIAACR 120
            GTLAN+ G VA +  KAAVD  GNG+G  VF+VK YGAKANGK+DDAQAFMTTWIAACR
Sbjct: 61  IGTLANSRGRVAINSTKAAVDLKGNGNGNAVFDVKKYGAKANGKSDDAQAFMTTWIAACR 120

Query: 121 NTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDII 180
           NT+GPA FLIP+GTFLVGP+VFAGPCQSRPIT+EIQGTVKATTDI++YS+ +WISIE I 
Sbjct: 121 NTTGPAKFLIPKGTFLVGPVVFAGPCQSRPITIEIQGTVKATTDISEYSSPDWISIEGIT 180

Query: 181 GFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN-------------------------- 240
           G ILTGSGVFDGQG +AWPYNDCKTNN CQ LPN                          
Sbjct: 181 GLILTGSGVFDGQGASAWPYNDCKTNNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTS 240

Query: 241 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 VFRCYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVT 300

[Close]

BLAST of Cp4.1LG12g05710 vs. NCBI nr
Match: KAG6575809.1 (Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (918), Expect = 8.55e-119
Identity = 219/461 (47.51%), Postives = 240/461 (52.06%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI------------------ 60
           MTTT NL LFQTLL V + QCCA +AA+ D V  AAN +DGI                  
Sbjct: 1   MTTTTNLSLFQTLLLVLACQCCAEVAAVFDHVKVAANPIDGIVSTANQQHRPPAPPLPLG 60

Query: 61  -GTLANTGGSVATDDMKAAVDQNGNGDG--VFNVKNYGAKANGKTDDAQAFMTTWIAACR 120
            GTLAN+ G VA +  KAAVD  GNG+G  VF+VK YGAKANGK+DDAQAFMTTWIAACR
Sbjct: 61  IGTLANSRGRVAINSTKAAVDLKGNGNGNAVFDVKKYGAKANGKSDDAQAFMTTWIAACR 120

Query: 121 NTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDII 180
           NT+GPA FLIP+GTFLVGP+VFAGPCQSRPIT+EIQGTVKATTDI++YS+ +WISIE I 
Sbjct: 121 NTTGPAKFLIPKGTFLVGPVVFAGPCQSRPITIEIQGTVKATTDISEYSSPDWISIEGIT 180

Query: 181 GFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN-------------------------- 240
           G ILTGSGVFDGQG +AWPYNDCKTNN CQ LPN                          
Sbjct: 181 GLILTGSGVFDGQGASAWPYNDCKTNNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTS 240

Query: 241 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 VFRCYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVT 300

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL
Match: A0A6J1JX85 (exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111488306 PE=3 SV=1)

HSP 1 Score: 353 bits (905), Expect = 3.83e-117
Identity = 215/459 (46.84%), Postives = 235/459 (51.20%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI------------------ 60
           MTTTRNL LFQTLL V + QCCA +AA+ D VTG AN +DGI                  
Sbjct: 1   MTTTRNLSLFQTLLLVLACQCCAEVAAVFDHVTGTANLIDGIVSTANQQHRPPAAPLPLG 60

Query: 61  -GTLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNT 120
             T AN  GSVA +  KAAV   GNG+ VF+VK YGAKANGK+DDAQAFMTTWIAACRNT
Sbjct: 61  IRTPANRRGSVAINGTKAAVYLKGNGNAVFDVKKYGAKANGKSDDAQAFMTTWIAACRNT 120

Query: 121 SGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGF 180
           +GPA FLIP+G FLVGP+ FAGPC+S PIT+EIQGTVKATTDI++YS+ +WISIE I G 
Sbjct: 121 TGPAKFLIPKGIFLVGPVTFAGPCKSMPITIEIQGTVKATTDISEYSSPDWISIEGITGL 180

Query: 181 ILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN---------------------------- 240
           ILTGSGVFDGQG +AWPYNDCK NN CQ LPN                            
Sbjct: 181 ILTGSGVFDGQGASAWPYNDCKINNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTSVF 240

Query: 241 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 RCYNFTATNMNIMAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVTNV 300

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL
Match: A0A6J1GQZ3 (exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111456314 PE=3 SV=1)

HSP 1 Score: 352 bits (902), Expect = 1.09e-116
Identity = 217/461 (47.07%), Postives = 239/461 (51.84%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTGAANRMDGI------------------ 60
           MTTT NL LFQTLL V + QCCA +AA+ D V  AAN ++GI                  
Sbjct: 1   MTTTTNLSLFQTLLLVLACQCCAEVAAVFDHVKVAANPINGIVSTTSQQHRPPAPPLPLG 60

Query: 61  -GTLANTGGSVATDDMKAAVDQNGNGDG--VFNVKNYGAKANGKTDDAQAFMTTWIAACR 120
            GTLAN+ G VA +  KAAVD  GNG+G  VF+VK YGAKANGK+DDAQAFMTTWIAACR
Sbjct: 61  IGTLANSHGRVAINSTKAAVDLKGNGNGNAVFDVKKYGAKANGKSDDAQAFMTTWIAACR 120

Query: 121 NTSGPATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDII 180
           NT+GPA FLIP+GTFLVGP+VFAGPCQSRPIT+EIQGTVKATTDI++YS+ +WISIE I 
Sbjct: 121 NTTGPAKFLIPKGTFLVGPVVFAGPCQSRPITIEIQGTVKATTDISEYSSPDWISIEGIT 180

Query: 181 GFILTGSGVFDGQGPAAWPYNDCKTNNKCQALPN-------------------------- 240
           G ILTGSGVFDGQG +AWPYNDCKTNN CQ LPN                          
Sbjct: 181 GLILTGSGVFDGQGASAWPYNDCKTNNNCQILPNSIKFTRLNHSIVDGLTSINSKGFHTS 240

Query: 241 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 VFRCYNFTATNMNIIAPGNSPNTDGMHLSTSKLVTISSSTIGTGDDCVSIGHSCEKITVT 300

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL
Match: A0A6J1GNU8 (exopolygalacturonase clone GBGE184-like OS=Cucurbita moschata OX=3662 GN=LOC111456160 PE=3 SV=1)

HSP 1 Score: 347 bits (891), Expect = 4.14e-116
Identity = 202/382 (52.88%), Postives = 207/382 (54.19%), Query Frame = 0


Query: 57  MKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLV 116
           MKAAVDQNGNGD VFNVKNYGAKA+GKTDDAQAFMTTWIAACRNTSGPA FLIPEGTFLV
Sbjct: 1   MKAAVDQNGNGDAVFNVKNYGAKADGKTDDAQAFMTTWIAACRNTSGPAKFLIPEGTFLV 60

Query: 117 GPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAA 176
           GP+VFAGPCQSRPIT+EIQGTVKATTDITQYS+TEWISIEDIIGFILTGSGVFDGQG AA
Sbjct: 61  GPVVFAGPCQSRPITIEIQGTVKATTDITQYSSTEWISIEDIIGFILTGSGVFDGQGAAA 120

Query: 177 WPYNDCKTNNKCQALPN------------------------------------------- 236
           WPYNDCKTNNKCQALPN                                           
Sbjct: 121 WPYNDCKTNNKCQALPNSIKFSKVNHSIVDGLTSINSKGFHTTVFRCYNFTATNMNIMAP 180

Query: 237 ------------------------------------------------------------ 269
                                                                       
Sbjct: 181 GNSPNTDGMHLSTSTLISISNGVIGTGDDCVSIGHSCEKVTVTNITCGPGHGISVGSLGK 240

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL
Match: A0A6J1JSB0 (exopolygalacturonase clone GBGE184-like OS=Cucurbita maxima OX=3661 GN=LOC111487946 PE=3 SV=1)

HSP 1 Score: 335 bits (859), Expect = 2.94e-111
Identity = 194/382 (50.79%), Postives = 204/382 (53.40%), Query Frame = 0


Query: 57  MKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLV 116
           M+AAVDQNGNGD VFNVK YGAKANGKTDDAQAFMTTWIAACRNTSGPA FLIP+GTFLV
Sbjct: 1   MQAAVDQNGNGDAVFNVKKYGAKANGKTDDAQAFMTTWIAACRNTSGPAKFLIPKGTFLV 60

Query: 117 GPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAA 176
           GP+VFAGPCQSRPIT+EIQGTVKA TDITQYS+TEWISIEDIIGFILTGSGVFDGQG +A
Sbjct: 61  GPVVFAGPCQSRPITIEIQGTVKAITDITQYSSTEWISIEDIIGFILTGSGVFDGQGASA 120

Query: 177 WPYNDCKTNNKCQALPN------------------------------------------- 236
           WPYNDCK N+ CQALPN                                           
Sbjct: 121 WPYNDCKNNDNCQALPNSIKFSKVNHSIVDGLTSINSKGFHTTVFRCYNFTATNMNIMAP 180

Query: 237 ------------------------------------------------------------ 269
                                                                       
Sbjct: 181 GNSPNTDGMHLSTSTLISISNSIIGTGDDCVSIGHSCEKVTVTNVTCGPGHGISVGSLGK 240

[Close]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL
Match: A0A5D3C9J8 (Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00530 PE=3 SV=1)

HSP 1 Score: 300 bits (767), Expect = 2.28e-96
Identity = 191/457 (41.79%), Postives = 217/457 (47.48%), Query Frame = 0


Query: 1   MTTTRNLRLFQTLLCVFSWQCCANLAAIPDDVTG-----------------AANRMDGIG 60
           MT TR++ LFQ LL VF+WQCC  ++AI +D+                   AA    GI 
Sbjct: 1   MTITRDIGLFQILLWVFAWQCCDKVSAITNDIANLNYEIVSTINQQLPSPVAAPGPFGIE 60

Query: 61  TLANTGGSVATDDMKAAVDQNGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSG 120
           TL +    V  DD+    D NGNG  VF+V  +GAKA+GKTDDAQAF+TTWI ACRNT G
Sbjct: 61  TLPDLDNMV-NDDINTNNDLNGNGGSVFHVTKHGAKADGKTDDAQAFVTTWIEACRNTVG 120

Query: 121 PATFLIPEGTFLVGPLVFAGPCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFIL 180
           PA  LIPEGT+LVGP+  AGPC+S PIT+E QGTVKATTDI+QYS+ EW SIEDI GFIL
Sbjct: 121 PAKILIPEGTYLVGPVTLAGPCKSFPITLENQGTVKATTDISQYSSPEWFSIEDITGFIL 180

Query: 181 TGSGVFDGQGPAAWPYNDCKTNNKCQALP------------------------------- 240
           TGSGVFDGQG AAWPYNDCK NN CQ LP                               
Sbjct: 181 TGSGVFDGQGVAAWPYNDCKNNNICQLLPISIKFSRLNDTIVDRLTSLNSKGFHMSLFSC 240

Query: 241 ------------------------------------------------------------ 271
                                                                       
Sbjct: 241 YNFTATNINIIAPHDSPNTDGIHLSTSKLVNIANSIIGTGDDCVSIGHSTEKITVTNVTC 300

[Close]

BLAST of Cp4.1LG12g05710 vs. TAIR 10
Match: AT1G02790.1 (polygalacturonase 4 )

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-25
Identity = 70/208 (33.65%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 64  NGNGDGVFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAG 123
           N     V+++  +GA  +G T+  +AF+ TWI  C ++  PAT L+P+GTFL GP++FAG
Sbjct: 45  NSGNPTVYDITKFGAVGDGSTNTFKAFLNTWIQVC-DSPVPATLLVPKGTFLAGPVIFAG 104

Query: 124 PCQSRPITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCK 183
           PC+S+ +TV + GT+ ATT  + Y+T EW   E +   +LTG+G F G+G A W  + C 
Sbjct: 105 PCKSK-VTVNVIGTIIATT--SGYATPEWFLFERVDNLVLTGTGTFHGKGEAVWKADGCG 164

Query: 184 TNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGAS 243
              +C   P + K++    + KN+     ++V        L   E V +++I L+   A 
Sbjct: 165 KKVQCNLPPTSLKFR----NMKNVEINGISSVNAKAFHMFLVKTENVNIQNIKLT-APAE 224

Query: 244 LRNTTTV--SSCLNAKITTSGVQNPPAC 270
             NT  +  S+  N  I  S +     C
Sbjct: 225 SPNTDGIHLSNADNVSILDSTIATGDDC 243

[Close]

BLAST of Cp4.1LG12g05710 vs. TAIR 10
Match: AT2G15460.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]

BLAST of Cp4.1LG12g05710 vs. TAIR 10
Match: AT2G15450.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-25
Identity = 67/202 (33.17%), Postives = 104/202 (51.49%), Query Frame = 0


Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]

BLAST of Cp4.1LG12g05710 vs. TAIR 10
Match: AT2G15470.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 110.2 bits (274), Expect = 2.7e-24
Identity = 66/202 (32.67%), Postives = 103/202 (50.99%), Query Frame = 0


Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ +GAK +GKTD+A AF + W  AC+  SG +   +P+GTF +G + F G C++ P
Sbjct: 30  VFNVQRHGAKPDGKTDNANAFTSIWSRACKRISGSSKIYVPKGTFYLGGVEFVGLCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  + +      WI+   I    ++GSG  DGQG  +WP+NDC TN  C 
Sbjct: 90  IEFIIDGTLLAPANPSDIKQDTWINFRYINNLSISGSGTLDGQGKQSWPHNDCHTNPNCP 149

Query: 190 ALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINLSYGGASLRNTTT 249
            L  A     + ++  NI+  ++ N    +     F      +  + ++  G S  NT  
Sbjct: 150 KL--AMTMGFAFVNNSNIKDITSLNSK--MGHFNFFSVHHFNITGVTITAPGDS-PNTDG 209

Query: 250 V--SSCLNAKITTSGVQNPPAC 270
           +   SC N +I+ + +     C
Sbjct: 210 IKMGSCSNIQISDTNIGTGDDC 225

[Close]

BLAST of Cp4.1LG12g05710 vs. TAIR 10
Match: AT1G43080.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 109.0 bits (271), Expect = 6.1e-24
Identity = 51/122 (41.80%), Postives = 70/122 (57.38%), Query Frame = 0


Query: 70  VFNVKNYGAKANGKTDDAQAFMTTWIAACRNTSGPATFLIPEGTFLVGPLVFAGPCQSRP 129
           VFNV+ YG++ +GKTD+A AF + W  AC   SG +   +P+GTF +G + F GPC++ P
Sbjct: 30  VFNVRRYGSRPDGKTDNANAFTSVWKRACTRISGSSKIYVPKGTFYLGGVEFVGPCKN-P 89

Query: 130 ITVEIQGTVKATTDITQYSTTEWISIEDIIGFILTGSGVFDGQGPAAWPYNDCKTNNKCQ 189
           I   I GT+ A  +        WI+   I    ++GSG  DGQG  +WP NDC  N  C 
Sbjct: 90  IEFVIDGTLLAPANPRDIKQDTWINFRYINNLSISGSGTLDGQGKYSWPLNDCHKNTNCP 149

Query: 190 AL 192
            L
Sbjct: 150 KL 150

HSP 2 Score: 55.5 bits (132), Expect = 7.9e-08
Identity = 32/86 (37.21%), Postives = 46/86 (53.49%), Query Frame = 0


Query: 178 PYNDCKTNNKCQALPNASKWKISDIHFKNIRGTSTTNVAVLLECSELFPCEGVELRDINL 237
           P+  C+   K       S  +I DI  KNI GTS   VAV L+CS+ FPC+ VEL DINL
Sbjct: 318 PHPPCEHEKK-----GESHVQIQDIKLKNIYGTSNNIVAVNLQCSKSFPCKNVELIDINL 377

Query: 238 SYGGASLRNTTTVSSCLNAKITTSGV 264
            + G    ++T +   ++  + +  V
Sbjct: 378 KHTGLEKGHSTAMCENVDGSVRSKMV 398

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g05710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P35339	2.2e-26	36.36	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1	[more]
P35338	9.1e-25	34.59	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1	[more]
P49062	1.6e-24	33.65	Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana OX=3702 GN=PGA3 PE=2 ...	[more]
P26216	1.6e-24	34.59	Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1	[more]
P49063	8.0e-21	32.74	Exopolygalacturonase clone GBGA483 OS=Arabidopsis thaliana OX=3702 GN=At3g07850 ...	[more]

BLAST of Cp4.1LG12g05710 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014350.1	4.34e-158	59.13	Exopolygalacturonase-like 3, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6575808.1	7.89e-133	56.50	Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023548983.1	7.01e-125	55.99	exopolygalacturonase clone GBGE184-like [Cucurbita pepo subsp. pepo]	[more]
KAG7014351.1	8.55e-119	47.51	Exopolygalacturonase-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma...	[more]
KAG6575809.1	8.55e-119	47.51	Exopolygalacturonase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cp4.1LG12g05710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JX85	3.83e-117	46.84	exopolygalacturonase-like OS=Cucurbita maxima OX=3661 GN=LOC111488306 PE=3 SV=1	[more]
A0A6J1GQZ3	1.09e-116	47.07	exopolygalacturonase-like OS=Cucurbita moschata OX=3662 GN=LOC111456314 PE=3 SV=...	[more]
A0A6J1GNU8	4.14e-116	52.88	exopolygalacturonase clone GBGE184-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1JSB0	2.94e-111	50.79	exopolygalacturonase clone GBGE184-like OS=Cucurbita maxima OX=3661 GN=LOC111487...	[more]
A0A5D3C9J8	2.28e-96	41.79	Exopolygalacturonase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]

BLAST of Cp4.1LG12g05710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02790.1	1.1e-25	33.65	polygalacturonase 4	[more]
AT2G15460.1	1.9e-25	33.17	Pectin lyase-like superfamily protein	[more]
AT2G15450.1	1.9e-25	33.17	Pectin lyase-like superfamily protein	[more]
AT2G15470.1	2.7e-24	32.67	Pectin lyase-like superfamily protein	[more]
AT1G43080.1	6.1e-24	41.80	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000743	Glycoside hydrolase, family 28	PFAM	PF00295	Glyco_hydro_28	coord: 103..194 e-value: 3.3E-15 score: 56.0
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 57..190 e-value: 2.7E-27 score: 97.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 191..255 e-value: 1.2E-9 score: 39.4
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 195..266
None	No IPR available	PANTHER	PTHR31375:SF158	POLYGALACTURONASE	coord: 4..190
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 195..266
None	No IPR available	PANTHER	PTHR31375	FAMILY NOT NAMED	coord: 4..190
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 70..184
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 186..270

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g05710.1	Cp4.1LG12g05710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
molecular_function	GO:0004650	polygalacturonase activity