Cp4.1LG11g11740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g11740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	40S ribosomal S3-like protein
Location	Cp4.1LG11: 9695379 .. 9697808 (+)
RNA-Seq Expression	Cp4.1LG11g11740
Synteny	Cp4.1LG11g11740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAACCAATCACGTCCGTTCATTTTGGAAGCCCTAGATCCATAACACTTGCATGCAGCCATATAAAGTTCAGTTTGCGGCAGCGCCAGTTCTTCCACCGGAACGCGGGCAGCACAAGAGTCTTCCCTTCTCTTAACTCAGATCTTTTCTGAGCGGCTTCGTTGCTGTCTTTCCAATTTCTCTGTGAAAATGGCGACCCAGATGAGTAAGAAGAGAAAGGTTAGTCCACGAAATTTCTTAATTTGTACTTCTTTCCTCACCATCTCTACAACGATTGATCCGTTCTGTTATGTATTCATTGTGTTTTATGTTCGATTTTGTTTCAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGTTAGTTTACCTTGGTTTTGAAATTCAATTGGTTAGACAACCTGCCTTTTTCGTTCATTGGATTTAATGGCATATTAACATTCATCGATATTACGTTCCTAATTTTCTTCCATTTTTTTGTTGGTTATTTAGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTACTTGGTGGCCTTGCTGTGCGAAGGTACTTCTTCGTTTTCCTTTCCATAACCACTTATAGAATTTTTATTATTGTTTTGTTGATTTGTCTTGTAAATGGAAATATGATTTATGATTAGGAAATAATGAAGATCACAGATTCCTTATTTTCTTGCACACAGCTCTGATATATGGTTCTAACAATCTCATTTATGGGATGACTTCGTTTTAGTTTCAATGCTTTCTTATGTCATCTACAAAGCAGATTGGTGTTTTGGTACCAATTTTGTGTCGGAAGGTGACCATATAAATTGTACTCTTCCGTTTGATAATCATTGTGGAATCATTTTGTTTCACACTGTAACCTTAGGGAGGAGACATGCTTCTGCCTCCATATTTTCCTCAAACTTTTTCCTCCATATTTTCTGAATCTAGAATGGAAAATTCACAATACGTTGAATTAGTACAATGAATACAGTTTATCATATATTAGCATAATTTACACATGCCAACCTCGTATTTTTGAAGGATAGGCAAATTAATAATATATTTTTAAAATTTTTATGTGGGGTGTAAGGACTCTGAGATTTGTGTGGTCTCCTGGAGGTGTGAATCAATAGTTTGAGCCTTGCCTCTAGGCTGAAGCCTTGAATTGGCTGTTCTTTAACTGAATGTTTGGTTTGTATACTTTTCATTGTTCGTGTGTATATTATTATCTACTAGATAATGTTGCTACTAAGACCTGCCCCTTTTATTCATAGTGGTAAAACATTGAAGTTGATTGATTTTGGGCCTATTAATAGTGACAGTTTCAGAGTGAAAGTATATTACTATTAGACAATGTGCTGCATGCTTATTTATGTTCTTTTTCCATCAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTAGCTTGTAGCTCAATCCATTGTTATCACTATGTGCAAAGTTTGTATAGGGATGTTACATGTAATGCTCAACATGCAAACAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGACACGTTCTTCTCAGACAGGTTAGCTTTTGAGAGGTCATAAAAACATGTGCTTACATAGTATATTGACTGTTGTGTTGATGTTATTTCTTTTTGGGTCAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTTGTCGTAATCCATTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGTAGTAGCAGCTTGAGAGGCTCTTTTTTTTTTCTTCTAGATATTTATTCATGGAATCAACCATCATCAATTTTGTATTTTCTGTCCCAAGATTTCGTTTCATGTCTCATTGATCTGTTGGTTTGAGCCTCCTGACTGCCCAGGTTTCTTTTGGATAATCAAACAAAATGCATATGGAGAACAGTTTTTTATGATCCCTTAGCCTTTTTATATATTATTAGCTTTTGCTTCATAATCATATATTTTGAACCTTTTGAACTGAATCTCATCTTTTCATTTCGTGTCCTTGCGTCCAGGT

mRNA sequence

TAAGAACCAATCACGTCCGTTCATTTTGGAAGCCCTAGATCCATAACACTTGCATGCAGCCATATAAAGTTCAGTTTGCGGCAGCGCCAGTTCTTCCACCGGAACGCGGGCAGCACAAGAGTCTTCCCTTCTCTTAACTCAGATCTTTTCTGAGCGGCTTCGTTGCTGTCTTTCCAATTTCTCTGTGAAAATGGCGACCCAGATGAGTAAGAAGAGAAAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTACTTGGTGGCCTTGCTGTGCGAAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGACACGTTCTTCTCAGACAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTTGTCGTAATCCATTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGTAGTAGCAGCTTGAGAGGCTCTTTTTTTTTTCTTCTAGATATTTATTCATGGAATCAACCATCATCAATTTTGTATTTTCTGTCCCAAGATTTCGTTTCATGTCTCATTGATCTGTTGGTTTGAGCCTCCTGACTGCCCAGGTTTCTTTTGGATAATCAAACAAAATGCATATGGAGAACAGTTTTTTATGATCCCTTAGCCTTTTTATATATTATTAGCTTTTGCTTCATAATCATATATTTTGAACCTTTTGAACTGAATCTCATCTTTTCATTTCGTGTCCTTGCGTCCAGGT

Coding sequence (CDS)

ATGGCGACCCAGATGAGTAAGAAGAGAAAGTTTGTGGCCGATGGAGTGTTTTTCGCCGAGCTAAACGAGGTTTTGACCAGGGAGTTGGCCGAGGATGGGTACTCCGGTGTCGAGGTTAGAGTCACTCCAATGCGCACTGAGATCATCATCCGAGCCACCCGCACCCAAAACGTTCTCGGAGAAAAAGGTAGGAGGATTAGGGAACTCACCTCGGTTGTGCAGAAGCGGTTCAAGTTTCCGGAGAACAGTGTTGAGCTCTATGCCGAGAAAGTTAACAATAGAGGGCTTTGTGCTATTGCCCAAGCCGAGTCTCTTCGTTATAAGCTACTTGGTGGCCTTGCTGTGCGAAGGGCATGCTATGGTGTTCTGAGATTCGTCATGGAAAGTGGAGCAAAGGGTTGCGAGGTTATTGTCAGTGGAAAACTGAGAGCACAGCGTGCAAAGTCTATGAAGTTTAAAGATGGATATATGATATCTTCGGGTCAACCAGTGAGAGATTATATTGACTCAGCTGTTAGACACGTTCTTCTCAGACAGGGAGTTCTTGGTATCAAAGTTAAGATCATGCTTGATTGGGATCCTAAGGGCAAGCAAGGCCCTACCACCCCTCTTCCTGATGTTGTCGTAATCCATTCTCCCAAGGAGGAAGAAGAAATCGTCCATAGACCAGCAGCAGCAGTTTTGACCACTGATATTGAGGTTCCAGTAGTAGTAGCAGCTTGA

Protein sequence

MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVAA

Homology

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot
Match: Q9FJA6 (40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 2.1e-110
Identity = 205/235 (87.23%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVP 236
           VLG+KVKIMLDWDPKGKQGP TPLPDVV+IH+PKE++  V+   A V+T    VP
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDD--VYIAPAQVVTQAAFVP 233

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot
Match: Q9M339 (40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.7e-110
Identity = 209/246 (84.96%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEI-----VHRPAAAVL---TTDI 239
           VLGIKVK+MLDWDPKG  GP TPLPDVV+IHSPKEEE I     V  PAA V     T +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot
Match: Q9SIP7 (40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 1.2e-108
Identity = 205/239 (85.77%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVH---RPAAAVLTTDIEVPV 237
           VLGIKVKIMLDWDP GK GP TPLPDVV+IH+PK  +++V+     AAA +T   E P+
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPL 237

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot
Match: P02350 (40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 1.8e-96
Identity = 183/216 (84.72%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1   MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot
Match: P47835 (40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 1.8e-96
Identity = 183/216 (84.72%), Postives = 191/216 (88.43%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MA QMSKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1   MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELT+VVQKRF FPE SVELYAEKV  RGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRF+MESGAKGCEV+VSGKLR QRAKSMKF DG MI SG PV  Y+D+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEE 217
           VLGIKVKIML WDP GK GP  PLPD V I  PK+E
Sbjct: 181 VLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216

[Close]

BLAST of Cp4.1LG11g11740 vs. NCBI nr
Match: XP_023546322.1 (40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 462 bits (1190), Expect = 5.56e-164
Identity = 240/240 (100.00%), Postives = 240/240 (100.00%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVAA 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVAA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVAA 240

[Close]

BLAST of Cp4.1LG11g11740 vs. NCBI nr
Match: XP_022946744.1 (40S ribosomal protein S3-2-like [Cucurbita moschata])

HSP 1 Score: 457 bits (1175), Expect = 1.24e-161
Identity = 240/244 (98.36%), Postives = 240/244 (98.36%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAA----VLTTDIEVPV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAA    VLTTDIEVPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. NCBI nr
Match: XP_022999390.1 (40S ribosomal protein S3-2-like [Cucurbita maxima] >XP_022999391.1 40S ribosomal protein S3-2-like [Cucurbita maxima])

HSP 1 Score: 456 bits (1173), Expect = 2.33e-161
Identity = 239/242 (98.76%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRP--AAAVLTTDIEVPVVV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRP  AAAVLTTDIEVPVVV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPSAAAAVLTTDIEVPVVV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. NCBI nr
Match: XP_038890738.1 (40S ribosomal protein S3-2 [Benincasa hispida])

HSP 1 Score: 451 bits (1160), Expect = 2.08e-159
Identity = 235/238 (98.74%), Postives = 235/238 (98.74%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRPAA VLTTDIEVPV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPAA-VLTTDIEVPVAV 237

[Close]

BLAST of Cp4.1LG11g11740 vs. NCBI nr
Match: XP_022154712.1 (40S ribosomal protein S3-2-like [Momordica charantia])

HSP 1 Score: 448 bits (1153), Expect = 2.18e-158
Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVA 239
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRPA  +L+TDIE+PVVVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPA--ILSTDIEIPVVVA 237

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL
Match: A0A6J1G4R4 (40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE=3 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 6.02e-162
Identity = 240/244 (98.36%), Postives = 240/244 (98.36%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAA----VLTTDIEVPV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAA    VLTTDIEVPV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAAAAAVLTTDIEVPV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL
Match: A0A6J1KF90 (40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3 SV=1)

HSP 1 Score: 456 bits (1173), Expect = 1.13e-161
Identity = 239/242 (98.76%), Postives = 239/242 (98.76%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRP--AAAVLTTDIEVPVVV 240
           VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRP  AAAVLTTDIEVPVVV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPSAAAAVLTTDIEVPVVV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL
Match: A0A6J1DMD4 (40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 PE=3 SV=1)

HSP 1 Score: 448 bits (1153), Expect = 1.06e-158
Identity = 232/239 (97.07%), Postives = 236/239 (98.74%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M+TQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MSTQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVVA 239
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRPA  +L+TDIE+PVVVA
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPA--ILSTDIEIPVVVA 237

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL
Match: A0A0A0LHQ6 (KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 3.76e-158
Identity = 233/238 (97.90%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP A VLT DIEVPV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPA-VLTADIEVPVAV 237

[Close]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL
Match: A0A1S3CAV4 (40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1)

HSP 1 Score: 447 bits (1150), Expect = 3.76e-158
Identity = 233/238 (97.90%), Postives = 233/238 (97.90%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVPVVV 238
           VLGIKVKIMLDWDPKGKQGPTTPLPDVV IHSPKEEEEIVHRP A VLT DIEVPV V
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVTIHSPKEEEEIVHRPPA-VLTADIEVPVAV 237

[Close]

BLAST of Cp4.1LG11g11740 vs. TAIR 10
Match: AT5G35530.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 399.8 bits (1026), Expect = 1.5e-111
Identity = 205/235 (87.23%), Postives = 221/235 (94.04%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVHRPAAAVLTTDIEVP 236
           VLG+KVKIMLDWDPKGKQGP TPLPDVV+IH+PKE++  V+   A V+T    VP
Sbjct: 181 VLGLKVKIMLDWDPKGKQGPMTPLPDVVIIHTPKEDD--VYIAPAQVVTQAAFVP 233

[Close]

BLAST of Cp4.1LG11g11740 vs. TAIR 10
Match: AT3G53870.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 399.1 bits (1024), Expect = 2.6e-111
Identity = 209/246 (84.96%), Postives = 222/246 (90.24%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           M TQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YIDSAVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEI-----VHRPAAAVL---TTDI 239
           VLGIKVK+MLDWDPKG  GP TPLPDVV+IHSPKEEE I     V  PAA V     T +
Sbjct: 181 VLGIKVKVMLDWDPKGISGPKTPLPDVVIIHSPKEEEAIYAPAQVAAPAALVADAPLTAV 240

[Close]

BLAST of Cp4.1LG11g11740 vs. TAIR 10
Match: AT2G31610.1 (Ribosomal protein S3 family protein )

HSP 1 Score: 394.0 bits (1011), Expect = 8.4e-110
Identity = 205/239 (85.77%), Postives = 221/239 (92.47%), Query Frame = 0


Query: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
           EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVRDYIDSAVRHVLLRQG 180
           GVLRFVMESGAKGCEVIVSGKLRA RAKSMKFKDGYM+SSGQP ++YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQG 180

Query: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDVVVIHSPKEEEEIVH---RPAAAVLTTDIEVPV 237
           VLGIKVKIMLDWDP GK GP TPLPDVV+IH+PK  +++V+     AAA +T   E P+
Sbjct: 181 VLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPK--DDVVYSAPAQAAAPVTLVQEAPL 237

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g11740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJA6	2.1e-110	87.23	40S ribosomal protein S3-3 OS=Arabidopsis thaliana OX=3702 GN=RPS3C PE=1 SV=1	[more]
Q9M339	3.7e-110	84.96	40S ribosomal protein S3-2 OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1	[more]
Q9SIP7	1.2e-108	85.77	40S ribosomal protein S3-1 OS=Arabidopsis thaliana OX=3702 GN=RPS3A PE=1 SV=1	[more]
P02350	1.8e-96	84.72	40S ribosomal protein S3-A OS=Xenopus laevis OX=8355 GN=rps3-a PE=2 SV=2	[more]
P47835	1.8e-96	84.72	40S ribosomal protein S3-B OS=Xenopus laevis OX=8355 GN=rps3-b PE=2 SV=1	[more]

BLAST of Cp4.1LG11g11740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546322.1	5.56e-164	100.00	40S ribosomal protein S3-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022946744.1	1.24e-161	98.36	40S ribosomal protein S3-2-like [Cucurbita moschata]	[more]
XP_022999390.1	2.33e-161	98.76	40S ribosomal protein S3-2-like [Cucurbita maxima] >XP_022999391.1 40S ribosomal...	[more]
XP_038890738.1	2.08e-159	98.74	40S ribosomal protein S3-2 [Benincasa hispida]	[more]
XP_022154712.1	2.18e-158	97.07	40S ribosomal protein S3-2-like [Momordica charantia]	[more]

BLAST of Cp4.1LG11g11740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4R4	6.02e-162	98.36	40S ribosomal protein S3-2-like OS=Cucurbita moschata OX=3662 GN=LOC111450719 PE...	[more]
A0A6J1KF90	1.13e-161	98.76	40S ribosomal protein S3-2-like OS=Cucurbita maxima OX=3661 GN=LOC111493776 PE=3...	[more]
A0A6J1DMD4	1.06e-158	97.07	40S ribosomal protein S3-2-like OS=Momordica charantia OX=3673 GN=LOC111021901 P...	[more]
A0A0A0LHQ6	3.76e-158	97.90	KH type-2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G000230 P...	[more]
A0A1S3CAV4	3.76e-158	97.90	40S ribosomal protein S3-2 OS=Cucumis melo OX=3656 GN=LOC103498727 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g11740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35530.1	1.5e-111	87.23	Ribosomal protein S3 family protein	[more]
AT3G53870.1	2.6e-111	84.96	Ribosomal protein S3 family protein	[more]
AT2G31610.1	8.4e-110	85.77	Ribosomal protein S3 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015946	K homology domain-like, alpha/beta	GENE3D	3.30.300.20		coord: 1..91 e-value: 1.9E-48 score: 164.3
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	GENE3D	3.30.1140.32		coord: 93..219 e-value: 4.2E-66 score: 222.7
IPR036419	Ribosomal protein S3, C-terminal domain superfamily	SUPERFAMILY	54821	Ribosomal protein S3 C-terminal domain	coord: 93..191
IPR001351	Ribosomal protein S3, C-terminal	PFAM	PF00189	Ribosomal_S3_C	coord: 106..188 e-value: 2.3E-25 score: 88.9
IPR004044	K Homology domain, type 2	PFAM	PF07650	KH_2	coord: 20..93 e-value: 1.1E-12 score: 47.6
IPR004044	K Homology domain, type 2	PROSITE	PS50823	KH_TYPE_2	coord: 21..92 score: 11.333969
IPR005703	Ribosomal protein S3, eukaryotic/archaeal	TIGRFAM	TIGR01008	TIGR01008	coord: 8..210 e-value: 6.6E-71 score: 236.1
None	No IPR available	PANTHER	PTHR11760	30S/40S RIBOSOMAL PROTEIN S3	coord: 3..234
None	No IPR available	PANTHER	PTHR11760:SF52	40S RIBOSOMAL PROTEIN S3-RELATED	coord: 3..234
None	No IPR available	CDD	cd02413	40S_S3_KH	coord: 15..95 e-value: 2.3918E-51 score: 159.695
IPR018280	Ribosomal protein S3, conserved site	PROSITE	PS00548	RIBOSOMAL_S3	coord: 147..183
IPR009019	K homology domain superfamily, prokaryotic type	SUPERFAMILY	54814	Prokaryotic type KH domain (KH-domain type II)	coord: 10..99

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g11740.1	Cp4.1LG11g11740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome