Cp4.1LG11g11160 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g11160
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
LocationCp4.1LG11: 9288125 .. 9288721 (-)
RNA-Seq ExpressionCp4.1LG11g11160
SyntenyCp4.1LG11g11160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACGACGTTTGGACTTGAATATTTGCTAAAACCCTTGTAATTCTTTGATGTCCATTTTCGTTGCAGTTCAAGCTTAGTGGAAAGAAGTCTACAATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGTCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTGAGACTTGTCTCTTTTCTCCATTTCCAATCTCATTTGTCATTTCATCAAATAATCATTACAGAAATGGATTCGGTTCAATTCCTTACTATGGAATAGATTTTTGCAATAGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGTTGGTTCCTCAGGGTATGTTCTTGCACTTGATTCTTGTGAATGCTAATGATTCTCCTTAATTGTATTTGTTCGAGGAATGTTGCTAAGGAAGTGTTCCGAATATCCGTTTGTTTGTTCGCACTT

mRNA sequence

CGACGACGTTTGGACTTGAATATTTGCTAAAACCCTTGTAATTCTTTGATGTCCATTTTCGTTGCAGTTCAAGCTTAGTGGAAAGAAGTCTACAATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGTCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGTTGGTTCCTCAGGGTATGTTCTTGCACTTGATTCTTGTGAATGCTAATGATTCTCCTTAATTGTATTTGTTCGAGGAATGTTGCTAAGGAAGTGTTCCGAATATCCGTTTGTTTGTTCGCACTT

Coding sequence (CDS)

ATGGCGTCCTTAAGGGCAGTCTCTCGGCTATCATCTCGCCTGCAATCTCTCGCTCCAAAGCTCAACAAAAGGTCTCCATCTTCTGAGCTCTCTCCATTCAAATCGTCTTGTCAATCTCAGCCCTCTGCAGCTTCTACATCGCGTGTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGTCAGGGGTCACTGATGCCATTGCACAGCGCTATAGCTGCAGCTAGATTGATTTCGAGTCTGAGCATTGAATCTCAAGGATGGGGGTTGGTTCCTCAGGGTATGTTCTTGCACTTGATTCTTGTGAATGCTAATGATTCTCCTTAA

Protein sequence

MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHLILVNANDSP
Homology
BLAST of Cp4.1LG11g11160 vs. NCBI nr
Match: XP_023547330.1 (uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547332.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 169 bits (429), Expect = 2.18e-52
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. NCBI nr
Match: XP_022946234.1 (uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946235.1 uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946236.1 uncharacterized protein LOC111450380 [Cucurbita moschata])

HSP 1 Score: 168 bits (426), Expect = 6.24e-52
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. NCBI nr
Match: KAG6599455.1 (hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 168 bits (426), Expect = 9.97e-52
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
           MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAASTSRVSCTSRLPLELS
Sbjct: 16  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 75

Query: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
           SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 76  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 114

BLAST of Cp4.1LG11g11160 vs. NCBI nr
Match: XP_022999549.1 (uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999550.1 uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999551.1 uncharacterized protein LOC111493876 [Cucurbita maxima])

HSP 1 Score: 167 bits (423), Expect = 1.79e-51
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAAS SRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASISRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. NCBI nr
Match: KAG7030432.1 (hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167 bits (423), Expect = 2.16e-51
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 94
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 94

BLAST of Cp4.1LG11g11160 vs. ExPASy TrEMBL
Match: A0A6J1G399 (uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC111450380 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 3.02e-52
Identity = 94/99 (94.95%), Postives = 97/99 (97.98%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKS+CQSQPSAASTSRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSACQSQPSAASTSRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. ExPASy TrEMBL
Match: A0A6J1KDE2 (uncharacterized protein LOC111493876 OS=Cucurbita maxima OX=3661 GN=LOC111493876 PE=4 SV=1)

HSP 1 Score: 167 bits (423), Expect = 8.66e-52
Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAAS SRVSCTSRLPLELS
Sbjct: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASISRVSCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. ExPASy TrEMBL
Match: A0A5A7V7B3 (Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00330 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 3.81e-50
Identity = 94/113 (83.19%), Postives = 101/113 (89.38%), Query Frame = 0

Query: 1   MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
           MASL+AVSRLSSRLQSL+PK NKRS SSEL   KS+CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1   MASLKAVSRLSSRLQSLSPKFNKRSSSSELFSSKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61  SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMF-----LHLILVNANDSP 108
           SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQGMF     LHL LVNA+DSP
Sbjct: 61  SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGMFCLSFFLHLGLVNADDSP 113

BLAST of Cp4.1LG11g11160 vs. ExPASy TrEMBL
Match: A0A0A0LKT5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 1.09e-45
Identity = 85/99 (85.86%), Postives = 92/99 (92.93%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRLQSLAPK NKRS SSEL  FKS+CQSQPSAASTSR+ CTSRLP+ELS
Sbjct: 1  MASLKAVSRLSSRLQSLAPKFNKRSSSSELFSFKSTCQSQPSAASTSRLHCTSRLPVELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSL+IESQGWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESQGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. ExPASy TrEMBL
Match: A0A6J1DYI4 (uncharacterized protein LOC111024217 OS=Momordica charantia OX=3673 GN=LOC111024217 PE=4 SV=1)

HSP 1 Score: 151 bits (381), Expect = 2.19e-45
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 60
          MASL+AVSRLSSRL SLAPKL K+ PSSE SP KSSCQS+PSAASTSR+SCTSRLPLELS
Sbjct: 1  MASLKAVSRLSSRLHSLAPKLKKKFPSSEPSPLKSSCQSKPSAASTSRISCTSRLPLELS 60

Query: 61 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 99
          SQGSLMPLHSAIAAARLISSL+IES+GWGLVPQG+ + L
Sbjct: 61 SQGSLMPLHSAIAAARLISSLTIESRGWGLVPQGISMPL 99

BLAST of Cp4.1LG11g11160 vs. TAIR 10
Match: AT1G55205.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 81.6 bits (200), Expect = 4.1e-16
Identity = 57/101 (56.44%), Postives = 74/101 (73.27%), Query Frame = 0

Query: 1   MASLRAVSRLSSRLQSLAPKLNKRSP--SSELSPFKSSCQSQPSAASTSRVSCTSRLPLE 60
           MAS   + RLSS++ SL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+E
Sbjct: 1   MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61  LSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 100
           LS   S++PLHSAIA+ARLISSLS+ES+ WGLVPQG+ + L
Sbjct: 61  LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQGISMPL 97

BLAST of Cp4.1LG11g11160 vs. TAIR 10
Match: AT1G55205.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G13674.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 9.2e-16
Identity = 56/96 (58.33%), Postives = 71/96 (73.96%), Query Frame = 0

Query: 1  MASLRAVSRLSSRLQSLAPKLNKRSP--SSELSPFKSSCQSQPSAASTSRVSCTSRLPLE 60
          MAS   + RLSS++ SL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+E
Sbjct: 1  MASSSKICRLSSKIHSLTQKLSKTNVHISSLPSPIKS---SSPSSA-TSRINQSFRLPVE 60

Query: 61 LSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQG 95
          LS   S++PLHSAIA+ARLISSLS+ES+ WGLVPQG
Sbjct: 61 LSCCLSMLPLHSAIASARLISSLSVESKSWGLVPQG 92

BLAST of Cp4.1LG11g11160 vs. TAIR 10
Match: AT3G13674.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G55205.1); Has 76 Blast hits to 76 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.0e-15
Identity = 54/101 (53.47%), Postives = 75/101 (74.26%), Query Frame = 0

Query: 1   MASLRAVSRLSSRLQSLAPKLNKRSP--SSELSPFKSSCQSQPSAASTSRVSCTSRLPLE 60
           MAS R + R SSRL+SL   L+ ++   SS  SP KS   + PS+A++ R++ +SRLP+E
Sbjct: 1   MASSRVLGRFSSRLKSLCQNLSNKNANVSSLPSPIKS---ASPSSATSCRLNRSSRLPVE 60

Query: 61  LSSQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGMFLHL 100
           LS   S++PLHSAIA++RL+SSLS+ES+ WGLVPQG+ L L
Sbjct: 61  LS---SMIPLHSAIASSRLVSSLSVESKIWGLVPQGLSLPL 95

BLAST of Cp4.1LG11g11160 vs. TAIR 10
Match: AT4G39300.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 45.1 bits (105), Expect = 4.3e-05
Identity = 37/95 (38.95%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 2  ASLRAVSR-LSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 61
          ++L A SR L SR +++  K     P++  SPF S  QS P A         SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRA---------SRVLSALG 66

Query: 62 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQGM 96
          S  +++PLHSA+A+ARL SS++ +S  W L+ QG+
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQGL 92

BLAST of Cp4.1LG11g11160 vs. TAIR 10
Match: AT4G39300.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G11630.2); Has 89 Blast hits to 89 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 3.6e-04
Identity = 36/93 (38.71%), Postives = 53/93 (56.99%), Query Frame = 0

Query: 2  ASLRAVSR-LSSRLQSLAPKLNKRSPSSELSPFKSSCQSQPSAASTSRVSCTSRLPLELS 61
          ++L A SR L SR +++  K     P++  SPF S  QS P A         SR+   L 
Sbjct: 7  SALMAGSRNLVSRSRTVTQKSLNLKPTTTSSPFASMSQSIPRA---------SRVLSALG 66

Query: 62 SQGSLMPLHSAIAAARLISSLSIESQGWGLVPQ 94
          S  +++PLHSA+A+ARL SS++ +S  W L+ Q
Sbjct: 67 SVETMIPLHSAVASARLRSSIAADSSCWSLLSQ 90

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023547330.12.18e-5295.96uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo] >XP_023547331.... [more]
XP_022946234.16.24e-5294.95uncharacterized protein LOC111450380 [Cucurbita moschata] >XP_022946235.1 unchar... [more]
KAG6599455.19.97e-5294.95hypothetical protein SDJN03_09233, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022999549.11.79e-5194.95uncharacterized protein LOC111493876 [Cucurbita maxima] >XP_022999550.1 uncharac... [more]
KAG7030432.12.16e-5198.94hypothetical protein SDJN02_08779, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
A0A6J1G3993.02e-5294.95uncharacterized protein LOC111450380 OS=Cucurbita moschata OX=3662 GN=LOC1114503... [more]
A0A6J1KDE28.66e-5294.95uncharacterized protein LOC111493876 OS=Cucurbita maxima OX=3661 GN=LOC111493876... [more]
A0A5A7V7B33.81e-5083.19Protein NUCLEAR FUSION DEFECTIVE 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A0A0LKT51.09e-4585.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004120 PE=4 SV=1[more]
A0A6J1DYI42.19e-4584.85uncharacterized protein LOC111024217 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
AT1G55205.14.1e-1656.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G55205.29.2e-1658.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G13674.12.0e-1553.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G39300.14.3e-0538.95unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G39300.23.6e-0438.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..51
NoneNo IPR availablePANTHERPTHR33156:SF43BNAANNG28360D PROTEINcoord: 1..97
IPR043459NFD6/NOXY2-likePANTHERPTHR33156OS02G0230000 PROTEINcoord: 1..97

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g11160.1Cp4.1LG11g11160.1mRNA