Cp4.1LG11g11130 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCGCCCATTTATGAAAATACAATATTAATAAATATTGATATCTTCAAAGAAAAATAATTTATTTTCTTCCAATGGAGGCGAGAAAAATTTTGTCAACTCACACAAACTAATTGACAGCAGAATTCTGAGCAAATTACCAATCCAACAATGCAAATTCTCACCTTCCTCCATGATTTTCCACAGTTCATTTCAATTTGATTCAATTCTTCAATCCCACTTCCCACTTCAGCTTTTCAACCTCACAGAAATTCATGACTTCGAGAATTTGAAGTTTGGAATCCGAAAAAGCTACAAGATTAAGCAACCAATATTGAGGAAGAAGATCTCGGAAAGTTCTTGCCCGTCTGGAAATTTCTTTTCCACAGCTTCTTCTCCGATTCTGGTACTGTTCTTACCGCTTTTTGGAGGGAATTAGGGTTAGGGTTTCTGAAAAAAAGAAAAAGAAAAAAAAGAAAAAGAAAAAAAAAGGTGTTGCTCTGCTGGTGTTGTGGCCATGGGTGATGAGAAATCGGTTATTGCCATGGCGAGCAGAGACAGAGAGCGAGATCGAGAGCTTCTTATTTCGGTTCCGGAGTCCGCCATTGATGATGCATCCTCAAAACCTTCGTCATCTCTTCATTCTGGCAGAGAGGTATAATTTAGGCTGGCTATGCTTCATTTGTAACTTGTGCTTAGATTCGCCGAGAACGTTTCTAGCGTAGCGCTCTGTAAATTTGTTGTGGATTTACAAGTATCAGAGTAAAACACATGGGTGCTTTTCACACAACTTGCCTGGTCTTACTAATTCTTGACCAATTCAATTCAGAATCTGGTTTATTTCTCTTTGCCCGTTGGAGAAATTGATTGATGTTGGCTCTGTTACAATTCATAGGAGCAATTCAATATTACAAATTAACATCAACTTTCACTAAGTTCTTCGCAATTGGAATATATCAGATTTTATACTTTCCTCCTTATTATCTGCCTAACCAGTCTATTCATATTGCTTTTAGACATTTTACAAGGTTGTTAGAAGCTGGGCTTCAAAGAAATTCATGACTGGATGGTGAGCTCTTCTTTCTCTTTCGATACGTTCATGCAATATAAGCATGTTTGTATCTTGATATCTATTGAAGAGGGTTATCCTTTGTATTACATACATTGCAGCAGTCTTTTATATATCCTTGAATCAATTTTATGTACATGTTCTTGCATTGTTTATATTCTTCTGTCACAACTCATAGCAAAAGCATTACTATGGGACGCTACCCTAATTAAATTAAACTTAATACTTTCTGGTTTTTGTGATTCAATTTGGTGGTCACAATCTATAGTATACAGTGTTTTAGGAGTTGTCCAAGTGCACCAATACTCCTTTGGCATTATTGAAGGCGTAGGGTATGTAGGCTGAAGAAGGGAGAAAATCTCCACATTTTGGAAAATTGTAACGTTCTAGGGTACAATGTGTCGGTCGGTGAGAGACCATGAGCCATTTTTTCAAGTAAAGTTCTTGAAGGGGTTTCCTCCATGTGTTTTGGAATTATGATTTCTCTCAATTGGCTGTTCAAGCAATATCTTCCTTTTGACAGTCCTAATGTCATGAAGGGGTTTGCCTTGTTTCTTAAGGATTGTTTCCTAAGGATTGTTTCCTAAGGATTACAATAAATGCTTATGCGTGATGACTAAATTTTGACTATTGAGATTGAATGGATGTTTAGTTCTATTACGAATCGATTAGACCAAAATTTATGTCAAACTCTTGCCCTATGTGTGCTTAGTTCCTTCCACCTTTTTGTCTTGCCTATGACACTCTGTACTTAAAACGTTATTGTACTTACCTGTTTATTTCTTCATTAAATATGCTACAATGTTCTGTAACAAAATGCTTTCTACAGTGTTATCCTATTCCCTATCGCAATTACATTCTATATAACATGGTGGTTTATTCGCTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTGATATCTTTGGTGAGCCATTATTTCATCTTTTCTTATCCTGTCTCTGATATTTATTTGACACGTTTTATACACTAACTTGTGGTGGTATAAGATAATTTTTGCAGTTCGTCTATCATATTGTTCTTGAACGATTAGACTTTTAGCTTGCTGATTGACAACGATGATTTGATTACCCTGCAAACATTCCTATATTTAACAAGTAACTTATATTTTTGAGATGCAATTTCCCTTCGTCCTCATTTTTTATTAACATGTTAAGATGTACTTTAAGGCTAAGCCTTGCTGGTGAGAGATTGGGATGTTTTGAGATACCCCTTTCAAGGTCCTAGATTCAAGCCCCTACCTAGAAAGTTTAATTTAAAACCTTTGTTGTCCGTAGGAGCTAACCTTTGGGCGGACAAAGCCTCCCTGGACACGAGTCGAGGTGGATTGTGGGCAATACAAGGAGTTGGCCCCCACACCCCAATTATTCAAAAAACATGTTTAGATGTTAGGAACTAAACTGAATTTCTGTACCAGATACATCTCAGGAATTGACTGTGATCCTTTCCCCCTCTTGTTTATGACATATGACAATTTGACATAATATTTTGAGCAAGATAAATGGATTCAATGAACGTGTAAAGTGATTTACTATCTGAGTCTCTTATGTCTCACGAATTATAGGACTTCAATTCATGATACACCGATTATTGATCTCCTTGAGATGTGCCTCATTAGTATTATACGTTTCTTCTTGTTCAAGTTCGTCTAGTCATGCTTTTTTGTTTTTGCATCTTCAATAGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTTGGTGTGTTTATGTCATCTTGGTTGGGAGCATCTGTCCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCGTTTGTTCGTCATATCTACAACGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGGTGGTTCCTGATTATTTGTCATTGCTCCTCATTTGGTTGCTCGAGTTCTGCTAGCTAATTGTTCTATTTTTACTATCAGACCAGAACTCACAAGCTTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCATCCGTAGTCCTCCAGGTAAACTGAGGGCAAATAGAATCTGATATGTTTTTTGGGAAGCTTTTTTATACCTCTAAACTTTTTTGGTTAAATCAATTATAATCCTAAACGTTCGCAATTGAACCGATTTAGGTCTTTTGTTGGTGATTCATAATTTTTTTTTGTCACTTTTATAAAATTATTGTTTTCTCTCGAAATCATACTAAAGTTGCTAGAAAATTTTTCACGTAATGCTTCCTAAATAAATAGAGAAATTAGAGGAAGAAGATGATGAAAACTCATTCGGAAAATGCATTTGCTTACTCCTCCAGCCTAAGTAATCTTGATTGTCTAACCCTGTCTGTTTTGAGGCAGAGCTATTCCGGGGAGGAGGAGCTATGCTGTGTCTACGTCCCCACGAACCATCTCTATATCGGTGACGTTTTCCTGATTCATACCAAGGATGTTATTAGACCAAATTTATCAGTGCGAGAAGGAATTGGTGAGGCTTCTCTTCGGGTTTTTTCTCGCTTGTTGCATAANGCAAATAGAATCTGATATGTTTTTTGGGAAACTTTTTTATACCTCTAAACCTTTTTGGTTAAATCAATTATAATCCTAAACGTTCGCAATTGAACCGATTTAGGTCTTTTGTTGGTGATTCATAACCTTTTTTGTCACTTTTATAAAATTATTGTTTTCTCTCGAAATCATACTAAGTTGCTAGAAAAATTTTCACGTAATGCTTCCTAAATAAATAGAGAAATTAGAGGAAGAAGAGATGATGAAAACTCATTCGGAAAATGCACTTGCTTACTCCTCCAGCCTAAATAATCTTGATTGTCTAACCCTGTCTGTTTTGAGGCAGAGCTATTCCGGGGAGGAGGAGCTATGCTGTGTCTACGTCCCCACGAACCATCTCTATATCGGTGACGTTTTCCTGATTCATACCAAGGATGTTATTAGACCAAATTTATCAGTGCGAGAAGGAATTGGTGAGGCTTCTCTTCGGGTTTTTTCTCGCTTGTTGCATAAATTTCCTATTATGCTACCAATTTCATTCCTGATAACTGAACTGAACTTTCACCTTCCAAAGCTTTGTAAAGTTGGTATTGTCAATTACATTATAATTCAACATGATCTTGTGGTCTGAGACATAGAATGCCAATAGGTCAGAGTTCTTGATTCTTGGAAATTGCTGAATTGTTGGATTCTGACTTATTTTCAAACTTGAAATATTGAGGGAAGAAAAGGCTGAAATGTGTATATATATATATATGGTGAACCATATTCTCACCGGAGATCAATCGTAATTCTGTCGTTATTTCCGTGATATTATTGCAGAAATCGTCGTCTCGGGAGGAATGTCGATGCCCCAAATACTTTCAACAATGAGTTCCGAGATTATGACCATAGAAAGAAGTTGACTTGAGAAAAGTTAAGAATGGGGATACTAGTAGGGCTCATAGTAGCAGCATTTGCGTATCTTCTTCTTCACCTCCGGATTCGAACCGACCACGCTGCAACCGTCATCTGGGTAAGTGCAAGGCCGAGACTGTTGCGTCCCAGTGAGTAATTTCGTAACAGTGTGATTTGTAAACCGAGCTTTCGAGTTTCTATCCTTTTGATAGTTCAAATATTGTTCAGTATATTATGTAGTCTTGAGAGAGGACTTCTGAAGGGTTGGATTTCTGTGAATTGGTTACTCTTCTATACTAAATTCAGTTCATTTATATTCATTCATGAAATAGTTGTACATGTTCATGTGAAAGGTTCATAAAATTCTCATTTAACGTC AATTTCGCCCATTTATGAAAATACAATATTAATAAATATTGATATCTTCAAAGAAAAATAATTTATTTTCTTCCAATGGAGGCGAGAAAAATTTTGTCAACTCACACAAACTAATTGACAGCAGAATTCTGAGCAAATTACCAATCCAACAATGCAAATTCTCACCTTCCTCCATGATTTTCCACAGTTCATTTCAATTTGATTCAATTCTTCAATCCCACTTCCCACTTCAGCTTTTCAACCTCACAGAAATTCATGACTTCGAGAATTTGAAGTTTGGAATCCGAAAAAGCTACAAGATTAAGCAACCAATATTGAGGAAGAAGATCTCGGAAAGTTCTTGCCCGTCTGGAAATTTCTTTTCCACAGCTTCTTCTCCGATTCTGAGACAGAGAGCGAGATCGAGAGCTTCTTATTTCGGTTCCGGAGTCCGCCATTGATGATGCATCCTCAAAACCTTCGTCATCTCTTCATTCTGGCAGAGAGACATTTTACAAGGTTGTTAGAAGCTGGGCTTCAAAGAAATTCATGACTGGATGTGTTATCCTATTCCCTATCGCAATTACATTCTATATAACATGGTGGTTTATTCGCTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTGATATCTTTGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTTGGTGTGTTTATGTCATCTTGGTTGGGAGCATCTGTCCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCGTTTGTTCGTCATATCTACAACGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGACCAGAACTCACAAGCTTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCATCCGTAGTCCTCCAGAGCTATTCCGGGGAGGAGGAGCTATGCTGTGTCTACGTCCCCACGAACCATCTCTATATCGGTGACGTTTTCCTGATTCATACCAAGGATGTTATTAGACCAAATTTATCAGTGCGAGAAGGAATTGAAATCGTCGTCTCGGGAGGAATGTCGATGCCCCAAATACTTTCAACAATGAGTTCCGAGATTATGACCATAGAAAGAAGTTGACTTGAGAAAAGTTAAGAATGGGGATACTAGTAGGGCTCATAGTAGCAGCATTTGCGTATCTTCTTCTTCACCTCCGGATTCGAACCGACCACGCTGCAACCGTCATCTGGGTAAGTGCAAGGCCGAGACTGTTGCGTCCCAGTGAGTAATTTCGTAACAGTGTGATTTGTAAACCGAGCTTTCGAGTTTCTATCCTTTTGATAGTTCAAATATTGTTCAGTATATTATGTAGTCTTGAGAGAGGACTTCTGAAGGGTTGGATTTCTGTGAATTGGTTACTCTTCTATACTAAATTCAGTTCATTTATATTCATTCATGAAATAGTTGTACATGTTCATGTGAAAGGTTCATAAAATTCTCATTTAACGTC ATGACTGGATGTGTTATCCTATTCCCTATCGCAATTACATTCTATATAACATGGTGGTTTATTCGCTTTGTGGATGGATTCTTCTCTCCAATCTATGCACATCTTGGAATTGATATCTTTGGTCTTGGATTTGTAACTTCCATTACATTCATCTTCCTGGTTGGTGTGTTTATGTCATCTTGGTTGGGAGCATCTGTCCTGGGCCTTGGGGAGTGGTTTATCAAGAGGATGCCGTTTGTTCGTCATATCTACAACGCTTCTAAGCAAATTAGTTCTGCAATATCATCAGACCAGAACTCACAAGCTTTCAAGGAAGTAGCTATCATAAGACATCCTCGTATTGGCGAATATGCATTTGGTTTCATCACTTCATCCGTAGTCCTCCAGAGCTATTCCGGGGAGGAGGAGCTATGCTGTGTCTACGTCCCCACGAACCATCTCTATATCGGTGACGTTTTCCTGATTCATACCAAGGATGTTATTAGACCAAATTTATCAGTGCGAGAAGGAATTGAAATCGTCGTCTCGGGAGGAATGTCGATGCCCCAAATACTTTCAACAATGAGTTCCGAGATTATGACCATAGAAAGAAGTTGA MTGCVILFPIAITFYITWWFIRFVDGFFSPIYAHLGIDIFGLGFVTSITFIFLVGVFMSSWLGASVLGLGEWFIKRMPFVRHIYNASKQISSAISSDQNSQAFKEVAIIRHPRIGEYAFGFITSSVVLQSYSGEEELCCVYVPTNHLYIGDVFLIHTKDVIRPNLSVREGIEIVVSGGMSMPQILSTMSSEIMTIERS Homology
BLAST of Cp4.1LG11g11130 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2) HSP 1 Score: 338.6 bits (867), Expect = 4.8e-92 Identity = 166/198 (83.84%), Postives = 183/198 (92.42%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 2.7e-90 Identity = 164/195 (84.10%), Postives = 179/195 (91.79%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1) HSP 1 Score: 315.8 bits (808), Expect = 3.4e-85 Identity = 154/197 (78.17%), Postives = 177/197 (89.85%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 4.7e-79 Identity = 141/186 (75.81%), Postives = 168/186 (90.32%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. NCBI nr
Match: XP_022999521.1 (protein CONTINUOUS VASCULAR RING 1-like [Cucurbita maxima] >XP_023546482.1 protein CONTINUOUS VASCULAR RING 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 387 bits (995), Expect = 1.01e-134 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. NCBI nr
Match: XP_022946565.1 (protein CONTINUOUS VASCULAR RING 1-like [Cucurbita moschata] >KAG6599451.1 Protein CONTINUOUS VASCULAR RING 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030429.1 Protein CONTINUOUS VASCULAR RING 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 387 bits (995), Expect = 1.05e-134 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. NCBI nr
Match: XP_004139344.1 (protein CONTINUOUS VASCULAR RING 1 isoform X1 [Cucumis sativus] >KGN60614.1 hypothetical protein Csa_019496 [Cucumis sativus]) HSP 1 Score: 383 bits (983), Expect = 8.73e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. NCBI nr
Match: XP_008458389.1 (PREDICTED: protein CONTINUOUS VASCULAR RING 1-like [Cucumis melo] >TYK10720.1 protein CONTINUOUS VASCULAR RING 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 383 bits (983), Expect = 8.73e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. NCBI nr
Match: XP_038890723.1 (protein CONTINUOUS VASCULAR RING 1-like [Benincasa hispida]) HSP 1 Score: 383 bits (983), Expect = 9.37e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy TrEMBL
Match: A0A6J1KDB2 (protein CONTINUOUS VASCULAR RING 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493857 PE=4 SV=1) HSP 1 Score: 387 bits (995), Expect = 4.90e-135 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy TrEMBL
Match: A0A6J1G484 (protein CONTINUOUS VASCULAR RING 1-like OS=Cucurbita moschata OX=3662 GN=LOC111450588 PE=4 SV=1) HSP 1 Score: 387 bits (995), Expect = 5.08e-135 Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy TrEMBL
Match: A0A5D3CH71 (Protein CONTINUOUS VASCULAR RING 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00300 PE=4 SV=1) HSP 1 Score: 383 bits (983), Expect = 4.23e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy TrEMBL
Match: A0A0A0LHX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G004150 PE=4 SV=1) HSP 1 Score: 383 bits (983), Expect = 4.23e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. ExPASy TrEMBL
Match: A0A1S3C7R2 (protein CONTINUOUS VASCULAR RING 1-like OS=Cucumis melo OX=3656 GN=LOC103497810 PE=4 SV=1) HSP 1 Score: 383 bits (983), Expect = 4.23e-133 Identity = 194/198 (97.98%), Postives = 198/198 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) ) HSP 1 Score: 337.8 bits (865), Expect = 5.9e-93 Identity = 166/198 (83.84%), Postives = 183/198 (92.42%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 ) HSP 1 Score: 332.8 bits (852), Expect = 1.9e-91 Identity = 164/195 (84.10%), Postives = 179/195 (91.79%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 ) HSP 1 Score: 315.8 bits (808), Expect = 2.4e-86 Identity = 154/197 (78.17%), Postives = 177/197 (89.85%), Query Frame = 0
BLAST of Cp4.1LG11g11130 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 ) HSP 1 Score: 295.4 bits (755), Expect = 3.3e-80 Identity = 141/186 (75.81%), Postives = 168/186 (90.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|