Cp4.1LG11g11080 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGGGAAAATCATAAGAATGGGCTTAGAAGAATTGACCGCCAAAAACTCGATGCCGTCAAATTAGTAGGAGGCATGGGACTCTCATCTTCATTCTCCTATTCTACTTCTCACCCACTTCTTCCCTTCCTCTCCTCCGCCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCATAAATTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCCGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAGCTTCTGTGAGTATTATCCCCTTCATTTTGTTTTCTTTGTAACTTCATTCATGAGGCTATCTTTCTTGCTTCCTTCTTTGAGCTTGTGGTTGATTTCCTTTCATTGATCGGAATTTTCTTGTTGACTTGAATTGCTTTTGTTCTTGTCTTGTTCTTGCTCTGATTTAGGTTTGAGCGATGAAATATTTCATTGTCTTGTTTTTGTTACTTTGTCATTTGATTTTTAGTCCTAACTTCAAGTAATTCCTTGGTTTTACTCGAGCGATAAATTACCATAAGTTTAGGCGATCTTTGCTTTTGTAGAATTAGCCCGCGTAATGTTGATGCTGTATCTTGATTGCATCTTCGGTGCATTTTGAAGTTTTCTGATTAATTAAAGTTCTTGGGCTGTGGGATATCATTTTAATGTCTAAATGTATATGTGTTCTCAATTTTTGGTCAAATTTTTTTTATCATTTAGAAGTACCACTTTCAATAGTTAACTAAGAACTACTCGTCTTTAAAGCGTGTTTCAAATTTCATCCAATCTTTTGGAGAGTGTTCTTTACTTTAGAAATCCTGAATTAAAGAGTATTCTGGGAGAATTTTACTGAATTTTCTTAGAAGTACCACGGATGCTGAATTTCATTCTTGGGAAACATCCCTTGAAGATGAAACAAAAGCCCTGGGGGAATTTTATTACACCCTTCTGCCGGGTCACTTGGCAAGAAAGAAACAGTACGATTTTTCAAGACAAGAAATCCTACAGAATGTGATTGAATTTCCCGAGTAACTTAAGACTTTGGTTGGGTGTCATTGTGTTCTCCTGCTCCTCTTGTCTCCTCCAAGGCCCACTGCCTCTTGCTAATGGTGGAACCTCTGTGAGCTTATGTTCTTGTACGTCTATCAAATAAAAGTTCACGAATTGTCAATCTTTTTGTTGGTTCACAACCTGCTTACCTTCTCTTAGTTCAAGCTTGGCATGATCCTTTTCTGACCATATAAGGGTGATGATATTTGAAGCTCCTAGTTACTGTAATAGCCCAAGTCTACTACTAATAGATATTGTCCGTTTTGGCTCATTACGTATTACTGTCAGCCTCACAGTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACGCTCTTATAAGGAATGCTTCGTTTCCCTCCCCAACCGATGTGGAATCTCACATTTACTTTGTCTAGTTATTCGTATTCCAATTCAATCTTTAGCACAAGACACCAGTTTGCAACTCTAGATCTATAATTAAGTTTTCTTAATCTATTTTTGGTTCTATTTTCATATTTGTTTTTGCTCTTTTATTTCACATCAATTTTCTTTGGTTTTTCTCTGAAGTTGTTGCTAAGTGGTGCTCTTCCTTTATTTGTTGCTCTGAAATAACTTATTGTACTGATATTATGTGTATATTATAACTGAACTAACACCTACAATTAATTTTTTTTATGTAGCAGGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTCGGACCAGTCGGCCACATGTGGTTCGTTTCCTTTATCTTTTCCTTATCAACTTTTGGTCATATCTATCATCTTTGTTACTACAAGAATAAGCTTCTATATTCTCAGGAAGGCAACATGGTTCTGCTTTATCCATTATTTTTTGTTTTCATATTCTGTGAATGCATAGATTGAAGTGGCAATTGGTTGGTTTGTTTAATCTTCATGGTTCTCTATGTAAGGAAACAAATCTGGAAAGTACTTTAGATTCTTGGATCAAGTCCTTTCAAGTACCACACCATTAAATGGATAACGTATCTAAGTTTCTTGGATTCATGAAGTTTGGTGTAGGATTGTTTGAAGTTTTATACAAGAAAATATGTTTTAAAGATTGTGAGTTTAACATAACATGAGTTTGGTTTGTGGATTTATAATTTGTCGAGTTAACATGGAGTATAAGAAGGCGATTCTATAATCTCGAGTTTATATATCCTTCAGGTTTAGTAAACTCATATTTTGGGATAAGTAACATAACTCACTCGAGATTAATGCTGGTTTAAACATAACTCACGCAACTTGTTTATATTAGATTATATAAACTTAACTCGTGAACACCTCTAAAGAAGCTGCTAGAGGTTGCTTAAAAGTTGCATGAGTTTGTAAAGTACTATTTTTTGTAACTTGATTGGATCCCCTTTCTCTTTAGGGTGCTCGTGTTTGTGGCGGTGTTCTTTTTTGTATGCTCTTGTATTCTTTCGTTTTCTCGCATCAAAATTAGTACGATTATTCATTGGAACTATTGTTTTGAACTTGTACGTTATTTGTGCACACGGGCATTTAAGAAATCGGATCGTTTGGCAGGTATGAAGGGTTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAAGAGATTTTGAGACTCTCAGGAAATGCCTGATTTGTTCCCTTTTATAGACTCTC AAGAGGGAAAATCATAAGAATGGGCTTAGAAGAATTGACCGCCAAAAACTCGATGCCGTCAAATTAGTAGGAGGCATGGGACTCTCATCTTCATTCTCCTATTCTACTTCTCACCCACTTCTTCCCTTCCTCTCCTCCGCCTTCTTCTTCTTCTTCTTCTTCCTCTTCCCATAAATTTCTTCTCTGAGAATCCTTTCCGCCATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCCGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAGCTTCTGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTCGGACCAGTCGGCCACATGTGGTATGAAGGGTTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAAGAGATTTTGAGACTCTCAGGAAATGCCTGATTTGTTCCCTTTTATAGACTCTC ATGTTTAGGCTCTGGAAATGGTATCAGAACTGCCTCACCTTCCATCCCGTGAAGACTCAGGTCATCAGCTCCGCCATTCTATGGGGCACTGGCGACATTGCAGCCCAATACGTTACTCACTCGGCCGCCAAAACGCATCTTCAAGCTTCTGATGCTGAAAAAGAGTTCAAAATCAACTGGAAACGTGTTGGAATCACAAGCATGTTTGGATTCGGCTTTGTCGGACCAGTCGGCCACATGTGGTATGAAGGGTTGGACAGATTTATAAGGCTAAGGCTTCAGCTACGGCCAAAATCAGCCAAGTTTGTTGGGGCAAAACTGGCAATGGATGGGCTGATCTTCGGACCACTCGACTTAATCGTGTTCTTCAGTTATATGGGATTTGCCAACGGCAAAGATGCTTCTGAAGTGAAAGAAGACTTGAAGCGGGACGTGTTCCCGGCGTTTATGTTGACGGGTACGGTGTGGCCTATCATTCAGGTCGCAAACTTTCGATATGTGCCAGTGAGGTACCAACTTCTCTATGTTAACTTGTTCTGCTTGTTGGACAGTGCTTTTTTGTCATGGTTTGAGCAACAAAATGATGCTCCTTGGAAGCAATGGTTTACCTCTTTTAATCCTTTTAATGAAAAATAA MFRLWKWYQNCLTFHPVKTQVISSAILWGTGDIAAQYVTHSAAKTHLQASDAEKEFKINWKRVGITSMFGFGFVGPVGHMWYEGLDRFIRLRLQLRPKSAKFVGAKLAMDGLIFGPLDLIVFFSYMGFANGKDASEVKEDLKRDVFPAFMLTGTVWPIIQVANFRYVPVRYQLLYVNLFCLLDSAFLSWFEQQNDAPWKQWFTSFNPFNEK Homology
BLAST of Cp4.1LG11g11080 vs. ExPASy Swiss-Prot
Match: Q66GV0 (Protein Mpv17 OS=Xenopus laevis OX=8355 GN=mpv17 PE=2 SV=2) HSP 1 Score: 100.9 bits (250), Expect = 1.8e-20 Identity = 64/190 (33.68%), Postives = 96/190 (50.53%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy Swiss-Prot
Match: Q4IPX8 (Protein SYM1 OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=SYM1 PE=3 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 9.0e-20 Identity = 58/188 (30.85%), Postives = 96/188 (51.06%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy Swiss-Prot
Match: Q2KIN6 (Protein Mpv17 OS=Bos taurus OX=9913 GN=MPV17 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 2.6e-19 Identity = 63/187 (33.69%), Postives = 91/187 (48.66%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy Swiss-Prot
Match: Q7SCY7 (Protein sym-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=sym-1 PE=3 SV=2) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-18 Identity = 55/187 (29.41%), Postives = 94/187 (50.27%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy Swiss-Prot
Match: P39210 (Protein Mpv17 OS=Homo sapiens OX=9606 GN=MPV17 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 2.2e-18 Identity = 62/187 (33.16%), Postives = 86/187 (45.99%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. NCBI nr
Match: XP_023546834.1 (protein SYM1-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443 bits (1139), Expect = 3.56e-157 Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. NCBI nr
Match: XP_022999533.1 (protein SYM1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 441 bits (1135), Expect = 1.45e-156 Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. NCBI nr
Match: XP_022946567.1 (protein SYM1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 439 bits (1130), Expect = 8.39e-156 Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. NCBI nr
Match: XP_023546833.1 (protein SYM1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438 bits (1127), Expect = 2.49e-155 Identity = 211/212 (99.53%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. NCBI nr
Match: XP_022999532.1 (protein SYM1-like isoform X1 [Cucurbita maxima] >KAG6599450.1 PXMP2/4 family protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030428.1 PXMP2/4 family protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 437 bits (1123), Expect = 1.02e-154 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy TrEMBL
Match: A0A6J1KJY8 (protein SYM1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493866 PE=3 SV=1) HSP 1 Score: 441 bits (1135), Expect = 7.02e-157 Identity = 210/211 (99.53%), Postives = 210/211 (99.53%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy TrEMBL
Match: A0A6J1G425 (protein SYM1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450589 PE=3 SV=1) HSP 1 Score: 439 bits (1130), Expect = 4.06e-156 Identity = 209/211 (99.05%), Postives = 209/211 (99.05%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy TrEMBL
Match: A0A6J1KB45 (protein SYM1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493866 PE=3 SV=1) HSP 1 Score: 437 bits (1123), Expect = 4.92e-155 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy TrEMBL
Match: A0A6J1G408 (protein SYM1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450589 PE=3 SV=1) HSP 1 Score: 435 bits (1118), Expect = 2.85e-154 Identity = 209/212 (98.58%), Postives = 209/212 (98.58%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. ExPASy TrEMBL
Match: A0A5A7V092 (Protein Mpv17 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold332G00280 PE=3 SV=1) HSP 1 Score: 409 bits (1051), Expect = 4.69e-144 Identity = 191/212 (90.09%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. TAIR 10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 323.9 bits (829), Expect = 9.3e-89 Identity = 152/229 (66.38%), Postives = 176/229 (76.86%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. TAIR 10
Match: AT3G24570.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 285.8 bits (730), Expect = 2.8e-77 Identity = 140/229 (61.14%), Postives = 164/229 (71.62%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. TAIR 10
Match: AT5G43140.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 86.3 bits (212), Expect = 3.3e-17 Identity = 50/191 (26.18%), Postives = 86/191 (45.03%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. TAIR 10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 79.7 bits (195), Expect = 3.1e-15 Identity = 51/184 (27.72%), Postives = 87/184 (47.28%), Query Frame = 0
BLAST of Cp4.1LG11g11080 vs. TAIR 10
Match: AT4G04470.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein ) HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14 Identity = 45/182 (24.73%), Postives = 89/182 (48.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|