Cp4.1LG11g10330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g10330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cp4.1LG11: 8651145 .. 8653742 (-)
RNA-Seq Expression	Cp4.1LG11g10330
Synteny	Cp4.1LG11g10330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGCCCACTCTCTTGTCTGTGGTCACCAATCCTCCATTTCCTTCTACCTCCTCACCTCTCTCTCTCTCTCTCTCGCATCCACAAACACGATGGTCCTTCTTCACTCATTTCCCGATGATGGCCTTCTCTCTCGTTTCCACCACCTCCTCCTCCGCTTCTGCCGCCACCGCCGTGCTATTACCTCCACATCACCACCACCGCCGTCGCCCTGCCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTCCTCTCCACGTCCCTCTCTCTCTCCACCGTCGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAACCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGGTCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTACCGAGAAATACGGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCGAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTACAAATTCAAACTAATTTCTCACGATTTACTCTTTACATTTTACATTTGATCCTTATGATTAGTTTTAGAAGTTTCAATTAATCAGTTTCATAATCCTGCATGCCATTTCTAATCCAATCCATTTAACACATTAGCACATTAGCTCAGGAGGGATATATGTTGAGATTTATCCCGTTAATCAGCAAATTCATGATAAGTAGACAATATCATACCATGGTAGAGAATCATGATTTCTAACATAGTATCACAGCCATGCTTTTGATTTAGTCATGTCAATAGAATCCAAGTGTCGAAAAAAGAAATGGCTAGCATTGAAGGTGTAGTCAAAAGTGACTCATGTGTCGAACAAAGGTGTACTTTGTTTGAGGGTTGAGGAGTCGAGCCTCGAATAAGGGGAGCCTATTCGAGGGCTACATAAACCTCAGGAGAGGCGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAAAGAGTCTCACATTGGCTAATTTAGGGGTTGATCATGGGTTTATAATAAGAAATACATCTCCAATAATATGAGGTCTTTTGGGGAAGCCCAAAGCAAAACACCATGGTAGAGAGTGTACTTTGTTTGAACAAAGGTGTAGTCAAAAGTGACTCATGTGTCGAACAAAGGTGTACTTTGTTTGAGGGTTGAGGAGTCGAGCCTCGAATAAGGGGAGCCTATTCGAGGGCTACATAAACCTCAGGAGAGGCGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGGGAAAGAGTCTCACATTGGCTAATTTAGAGGTTGATCATGGGTTTATAATAAGAAATACATCTCCTTTGATATGAGGTCTTTTGGGGAAGCCCAAAACAAAACACCATGGTAGAGAATCGTGATTCTTAATAGTATACGACTAGTATCACTCAAGAAATAAACTACTAAGTTTTAAAACGAAGATCAAATTGTAAGGAAAAACTTCACCAAATTAGAGCTAAGCAAAAAGGGCTGAAATTAGTACCAAAGATGTTTGATATCTGTGTAAATTTTGGGAGTTTCAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAAACACAGCCCACTTGCCCTTTGTTATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATATTTCTTTGTGTTCTTCTACGAAAATTGAACATTCCATCCCATGTTTTTGTTTTTGTTTTTGTTTTCTCACATGAACAAAGGGCTAACCTGGCCTCTGTTCTTGTTTGGACCATTGTCTGTGTTCAAACCAATCGGAAATCAAATTTTGATGTCAATACTGTTGACATTTTATATGCTAAAGAAAGCATAAATTCGTTGTTGTTCACTCATTGTTATTGTTTTTGTCCTGTTCGTTATATGTGAGTTTTCATATTGGTTGGAGAGGAGAACGAAACATTTCTTATAAGATTGTGGAAACCTCTCCCTAATAGATGTATTTTAAAACTGTGAGACTGACAGCGATATATAACGGGCCAAAACAGACCATATCTACCTGCGGTGGGATTGGGCTTGGGCTCTTACCTTCTATATCCCATTTTTTAGAAGCAAATGTGTATCTAATG

mRNA sequence

GGGCCCACTCTCTTGTCTGTGGTCACCAATCCTCCATTTCCTTCTACCTCCTCACCTCTCTCTCTCTCTCTCTCGCATCCACAAACACGATGGTCCTTCTTCACTCATTTCCCGATGATGGCCTTCTCTCTCGTTTCCACCACCTCCTCCTCCGCTTCTGCCGCCACCGCCGTGCTATTACCTCCACATCACCACCACCGCCGTCGCCCTGCCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTCCTCTCCACGTCCCTCTCTCTCTCCACCGTCGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAACCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGGTCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTACCGAGAAATACGGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCGAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAAACACAGCCCACTTGCCCTTTGTTATCTCTCAAGGTTCCATTTCTTTGCCTTCTCATATTTCTTTGTGTTCTTCTACGAAAATTGAACATTCCATCCCATGTTTTTGTTTTTGTTTTTGTTTTCTCACATGAACAAAGGGCTAACCTGGCCTCTGTTCTTGTTTGGACCATTGTCTGTGTTCAAACCAATCGGAAATCAAATTTTGATGTCAATACTGTTGACATTTTATATGCTAAAGAAAGCATAAATTCGTTGTTGTTCACTCATTGTTATTGTTTTTGTCCTGTTCGTTATATGTGAGTTTTCATATTGGTTGGAGAGGAGAACGAAACATTTCTTATAAGATTGTGGAAACCTCTCCCTAATAGATGTATTTTAAAACTGTGAGACTGACAGCGATATATAACGGGCCAAAACAGACCATATCTACCTGCGGTGGGATTGGGCTTGGGCTCTTACCTTCTATATCCCATTTTTTAGAAGCAAATGTGTATCTAATG

Coding sequence (CDS)

GGGCCCACTCTCTTGTCTGTGGTCACCAATCCTCCATTTCCTTCTACCTCCTCACCTCTCTCTCTCTCTCTCTCGCATCCACAAACACGATGGTCCTTCTTCACTCATTTCCCGATGATGGCCTTCTCTCTCGTTTCCACCACCTCCTCCTCCGCTTCTGCCGCCACCGCCGTGCTATTACCTCCACATCACCACCACCGCCGTCGCCCTGCCGGAGACATTGCACTTCCTCGTCGATCCCTCCTCCTCCTCTCCACGTCCCTCTCTCTCTCCACCGTCGTCGATCCACCTCCCTCCCCGGCTTCCCCTTCGCCGGACACCACCATCACCGACCGCGTCTTCATCGACTTCAGCATTTGCCCAACCAACTTCCTTCCCAACCGTGAATCCGCCGATGATGGCGGCGATTCCATCCTCTGCTCCGATTCCGCCCTCCTCGGTCGCCTCGTTCTCGGCCTCTACGGCCACCTGGTTCCAATCACCGTCGCCAATTTCAAATCCATGTGTACCGGGTCCTGCGGCTCCTCGTATAAGGGCACTTTGGTCCACAAAATCTTCCCCGGCCAATTCTTCCTCGCCGGTCGACAGGGTCGCCGCGACAAAGGAGCAGTCCGGCCACCGCAACAATTACCGAGAAATACGGAAACGGTGAAGTCCGATTCGTTCTTGCTTTCGCATTCGAGAGGCGGCATTGTTTCTTTGTGCCTTTCGGAGAACGACGACGACGACGAATTGAAATTGGATCCAAATTATCACAATGTGGAATTCTTGATCACCACCGGCCCTGGCCCCTGCCCCCAGCTTGATAGCGAGAACATTGTCTTCGGGACTGTGCTTGAAGGTCTGGATGTTGTGGCAGCCATATCCTCAACTCCAACATACAAGCCATCTGAGAGAATTAGGCAATTCAATGATTTGGCTAAGTTCTTAGGAGATGAAAGGGCTCAAAATGCAAGAACAATATGGAACAGACCTCTCCAAACTGTTTATATCAGTGACTGTGGAGAGCTCAAAGTTGCAAAGCCTTCACTGTCTCCAACTCTGCCTTAA

Protein sequence

GPTLLSVVTNPPFPSTSSPLSLSLSHPQTRWSFFTHFPMMAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP

Homology

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot
Match: O65220 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CYP28 PE=1 SV=1)

HSP 1 Score: 359.4 bits (921), Expect = 4.7e-98
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 54  AATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPSPASPSPDTTITDRV 113
           A++++L+PP             L RR+LLL   S +++TV  PPP+   PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLL---STTIATVTPPPPA-KPPSPDITITDRV 61

Query: 114 FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 173
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 174 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAV-RPPQQLPRNTETVKSDSFLLSHSRGG 233
            +SYK T VHKIFPGQ+FLAGRQ  GRRD   V    + LPRNT+ V S +FLL H+R G
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAG 181

Query: 234 IVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISS 293
           +VSLCLSENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS
Sbjct: 182 VVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 241

Query: 294 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 350
            PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSLSPTLP
Sbjct: 242 IPTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot
Match: Q9ASS6 (Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL5 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-16
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 105 PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 164
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 84  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 143

Query: 165 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 224
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 144 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 203

Query: 225 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 284
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 204 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 258

Query: 285 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 342
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 264 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 258

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot
Match: Q01490 (Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 GN=CYPB PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.6e-16
Identity = 64/195 (32.82%), Postives = 88/195 (45.13%), Query Frame = 0


Query: 146 LGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVR 205
           LGR+VLGLYG +VP TV NF+++ TG  G  YK +  H++    F + G    R  G   
Sbjct: 43  LGRIVLGLYGEVVPKTVENFRALATGEKGYGYKNSKFHRVIK-DFMIQGGDFTRGDGTGG 102

Query: 206 PPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPC 265
                    E    ++F L H+  GI+S+  +  D +            +F ITT     
Sbjct: 103 KSIY----GERFADENFKLRHTGPGILSMANAGRDTNGS----------QFFITT--VTT 162

Query: 266 PQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRP 325
             LD  ++VFG V+EG+DVV AI +T T                 GD           RP
Sbjct: 163 SWLDGRHVVFGKVIEGMDVVTAIETTKTLP---------------GD-----------RP 194

Query: 326 LQTVYISDCGELKVA 341
              V I+DCGEL V+
Sbjct: 223 ATPVIIADCGELPVS 194

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot
Match: P18253 (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ppi1 PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 2.9e-15
Identity = 52/156 (33.33%), Postives = 77/156 (49.36%), Query Frame = 0


Query: 146 LGRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVR 205
           LGR+V  L+  +VP T ANF+++CTG  G  Y G+  H++ P QF L G    R  G   
Sbjct: 15  LGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIP-QFMLQGGDFTRGNGTGG 74

Query: 206 PPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPC 265
                    E    ++F L H++ G++S+              PN +  +F ITT     
Sbjct: 75  KSIY----GEKFPDENFALKHNKPGLLSMA----------NAGPNTNGSQFFITT--VVT 134

Query: 266 PQLDSENIVFGTVLEGLDVVAAISSTPTYKPSERIR 302
           P LD +++VFG V EG+DVV  + S  +   + R R
Sbjct: 135 PWLDGKHVVFGEVTEGMDVVKKVESLGSNSGATRAR 153

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot
Match: Q41651 (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.9e-15
Identity = 52/149 (34.90%), Postives = 75/149 (50.34%), Query Frame = 0


Query: 147 GRLVLGLYGHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRP 206
           GR+V+GL+G  VP TV NFK++ TG+ G  Y+G+  H+I P  F + G       G    
Sbjct: 96  GRIVIGLFGDAVPKTVENFKTLSTGAKGYGYQGSFFHRIIP-NFMIQGGDFTEGNGT--- 155

Query: 207 PQQLPRNTETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCP 266
              +       + +SF L H   G++S+              PN +  +F I T   P P
Sbjct: 156 -GGVSIYGSKFEDESFDLKHVGPGVLSMA----------NAGPNTNGSQFFICT--VPTP 215

Query: 267 QLDSENIVFGTVLEGLDVVAAISSTPTYK 296
            LD+ ++VFG V+EGLDVV  + S  T K
Sbjct: 216 WLDNRHVVFGHVIEGLDVVKQLESQETSK 227

[Close]

BLAST of Cp4.1LG11g10330 vs. NCBI nr
Match: XP_023545629.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 632 bits (1629), Expect = 7.44e-228
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0


Query: 39  MMAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPP 98
           MMAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPP
Sbjct: 1   MMAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPP 60

Query: 99  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 158
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120

Query: 159 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 218
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180

Query: 219 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 278
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240

Query: 279 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 338
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300

Query: 339 VAKPSLSPTLP 349
           VAKPSLSPTLP
Sbjct: 301 VAKPSLSPTLP 311

[Close]

BLAST of Cp4.1LG11g10330 vs. NCBI nr
Match: XP_022946676.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >XP_022946677.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata])

HSP 1 Score: 623 bits (1606), Expect = 2.47e-224
Identity = 308/312 (98.72%), Postives = 309/312 (99.04%), Query Frame = 0


Query: 39  MMAFSLVSTT-SSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPP 98
           MMAFSLVSTT SSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLST VDPP
Sbjct: 1   MMAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPP 60

Query: 99  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 158
           PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL
Sbjct: 61  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 120

Query: 159 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 218
           VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV
Sbjct: 121 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 180

Query: 219 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 278
           KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT
Sbjct: 181 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 240

Query: 279 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 338
           VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL
Sbjct: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 300

Query: 339 KVAKPSLSPTLP 349
           KVAKPSL+PTLP
Sbjct: 301 KVAKPSLTPTLP 312

[Close]

BLAST of Cp4.1LG11g10330 vs. NCBI nr
Match: XP_022999012.1 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima] >XP_022999013.1 peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima])

HSP 1 Score: 622 bits (1603), Expect = 7.09e-224
Identity = 307/312 (98.40%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 39  MMAFSLVSTTSSS-ASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPP 98
           MMAFSLVSTTSSS ASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLST VDPP
Sbjct: 1   MMAFSLVSTTSSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTAVDPP 60

Query: 99  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 158
           PSPASPSP+TTITDRVF+DFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL
Sbjct: 61  PSPASPSPNTTITDRVFLDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 120

Query: 159 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 218
           VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV
Sbjct: 121 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 180

Query: 219 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 278
           KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLD+ENIVFGT
Sbjct: 181 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDNENIVFGT 240

Query: 279 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 338
           VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL
Sbjct: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 300

Query: 339 KVAKPSLSPTLP 349
           KVAKPSLSPTLP
Sbjct: 301 KVAKPSLSPTLP 312

[Close]

BLAST of Cp4.1LG11g10330 vs. NCBI nr
Match: KAG7030345.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 621 bits (1601), Expect = 1.38e-223
Identity = 307/311 (98.71%), Postives = 308/311 (99.04%), Query Frame = 0


Query: 40  MAFSLVSTT-SSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPP 99
           MAFSLVSTT SSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLST VDPPP
Sbjct: 1   MAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPPP 60

Query: 100 SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 159
           SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV
Sbjct: 61  SPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLV 120

Query: 160 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 219
           PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK
Sbjct: 121 PITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVK 180

Query: 220 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 279
           SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV
Sbjct: 181 SDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTV 240

Query: 280 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 339
           LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK
Sbjct: 241 LEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELK 300

Query: 340 VAKPSLSPTLP 349
           VAKPSL+PTLP
Sbjct: 301 VAKPSLTPTLP 311

[Close]

BLAST of Cp4.1LG11g10330 vs. NCBI nr
Match: KAG6599358.1 (Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 617 bits (1592), Expect = 3.76e-222
Identity = 305/315 (96.83%), Postives = 308/315 (97.78%), Query Frame = 0


Query: 39  MMAFSLVSTTSSS----ASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVV 98
           MMAFSLVSTT+SS    A+AATAVLLPPHHHHRR P GDIALPRRSLLLLSTSLSLST V
Sbjct: 1   MMAFSLVSTTTSSSASAATAATAVLLPPHHHHRRHPTGDIALPRRSLLLLSTSLSLSTAV 60

Query: 99  DPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLY 158
           DPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLY
Sbjct: 61  DPPPSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLY 120

Query: 159 GHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNT 218
           GHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNT
Sbjct: 121 GHLVPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNT 180

Query: 219 ETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIV 278
           ETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIV
Sbjct: 181 ETVKSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIV 240

Query: 279 FGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDC 338
           FGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDC
Sbjct: 241 FGTVLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDC 300

Query: 339 GELKVAKPSLSPTLP 349
           GELKVAKPSL+PTLP
Sbjct: 301 GELKVAKPSLTPTLP 315

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL
Match: A0A6J1G4B4 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111450670 PE=4 SV=1)

HSP 1 Score: 623 bits (1606), Expect = 1.20e-224
Identity = 308/312 (98.72%), Postives = 309/312 (99.04%), Query Frame = 0


Query: 39  MMAFSLVSTT-SSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPP 98
           MMAFSLVSTT SSSASAATAVLLPPHHHHRRRP GDIALPRRSLLLLSTSLSLST VDPP
Sbjct: 1   MMAFSLVSTTTSSSASAATAVLLPPHHHHRRRPTGDIALPRRSLLLLSTSLSLSTAVDPP 60

Query: 99  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 158
           PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL
Sbjct: 61  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 120

Query: 159 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 218
           VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV
Sbjct: 121 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 180

Query: 219 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 278
           KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT
Sbjct: 181 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 240

Query: 279 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 338
           VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL
Sbjct: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 300

Query: 339 KVAKPSLSPTLP 349
           KVAKPSL+PTLP
Sbjct: 301 KVAKPSLTPTLP 312

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL
Match: A0A6J1KIE5 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111493528 PE=4 SV=1)

HSP 1 Score: 622 bits (1603), Expect = 3.43e-224
Identity = 307/312 (98.40%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 39  MMAFSLVSTTSSS-ASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPP 98
           MMAFSLVSTTSSS ASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLST VDPP
Sbjct: 1   MMAFSLVSTTSSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTAVDPP 60

Query: 99  PSPASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 158
           PSPASPSP+TTITDRVF+DFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL
Sbjct: 61  PSPASPSPNTTITDRVFLDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHL 120

Query: 159 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 218
           VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV
Sbjct: 121 VPITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETV 180

Query: 219 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGT 278
           KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLD+ENIVFGT
Sbjct: 181 KSDSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDNENIVFGT 240

Query: 279 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 338
           VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL
Sbjct: 241 VLEGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGEL 300

Query: 339 KVAKPSLSPTLP 349
           KVAKPSLSPTLP
Sbjct: 301 KVAKPSLSPTLP 312

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL
Match: A0A0A0LFD1 (PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G009340 PE=4 SV=1)

HSP 1 Score: 577 bits (1488), Expect = 1.03e-206
Identity = 281/310 (90.65%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 40  MAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPS 99
           MAF+L+ST SSSA+A T  LLPPHH+HRR  +GDI LPRRSLLLLSTSLSLST V+PPPS
Sbjct: 1   MAFALLST-SSSAAATTVALLPPHHNHRRLRSGDITLPRRSLLLLSTSLSLSTAVNPPPS 60

Query: 100 PASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVP 159
            ASPSPDTTITDRVFIDFSICPTNFLPNRES DDGGDS+LCSDS LLGRLV+GLYGHLVP
Sbjct: 61  LASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGGDSLLCSDSVLLGRLVIGLYGHLVP 120

Query: 160 ITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKS 219
            T +NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VKS
Sbjct: 121 TTASNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS 180

Query: 220 DSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVL 279
           DSFLLSHSRGG++SLCLSENDDDD+LKLDPNYHNVEFLITTGPGPCPQLDS+NIVFGTVL
Sbjct: 181 DSFLLSHSRGGVISLCLSENDDDDDLKLDPNYHNVEFLITTGPGPCPQLDSKNIVFGTVL 240

Query: 280 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV 339
           EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV
Sbjct: 241 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV 300

Query: 340 AKPSLSPTLP 349
           AKPSLSPTLP
Sbjct: 301 AKPSLSPTLP 309

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL
Match: A0A5D3BI73 (Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00920 PE=4 SV=1)

HSP 1 Score: 577 bits (1486), Expect = 2.15e-206
Identity = 279/310 (90.00%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 40  MAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPS 99
           MAF+L+ST SSSA+A T  LLPPHH++RR  +GD  LPRRSLLLLSTSLSLST ++PPPS
Sbjct: 1   MAFALLSTYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPPS 60

Query: 100 PASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVP 159
           PASPSPDTTITDRVFIDFSICPTNFLPNRES DDG DS+LCSDS LLGRLV+GLYGHLVP
Sbjct: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSDSLLCSDSVLLGRLVIGLYGHLVP 120

Query: 160 ITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKS 219
           ITV+NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VKS
Sbjct: 121 ITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS 180

Query: 220 DSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVL 279
           DSFLLSHSRGG+VSLCLSENDDDD+LKLDP+YHNVEFLITTGPGPCPQLDS+NIVFGTVL
Sbjct: 181 DSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTVL 240

Query: 280 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV 339
           EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYIS CGELKV
Sbjct: 241 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELKV 300

Query: 340 AKPSLSPTLP 349
           AKPSLSPTLP
Sbjct: 301 AKPSLSPTLP 310

[Close]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL
Match: A0A1S3C403 (peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496583 PE=4 SV=1)

HSP 1 Score: 577 bits (1486), Expect = 2.15e-206
Identity = 279/310 (90.00%), Postives = 295/310 (95.16%), Query Frame = 0


Query: 40  MAFSLVSTTSSSASAATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPS 99
           MAF+L+ST SSSA+A T  LLPPHH++RR  +GD  LPRRSLLLLSTSLSLST ++PPPS
Sbjct: 1   MAFALLSTYSSSAAAITTALLPPHHNYRRFRSGDTTLPRRSLLLLSTSLSLSTAINPPPS 60

Query: 100 PASPSPDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVP 159
           PASPSPDTTITDRVFIDFSICPTNFLPNRES DDG DS+LCSDS LLGRLV+GLYGHLVP
Sbjct: 61  PASPSPDTTITDRVFIDFSICPTNFLPNRESTDDGSDSLLCSDSVLLGRLVIGLYGHLVP 120

Query: 160 ITVANFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKS 219
           ITV+NFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKG VRPP QLPRNTE+VKS
Sbjct: 121 ITVSNFKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGEVRPPLQLPRNTESVKS 180

Query: 220 DSFLLSHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVL 279
           DSFLLSHSRGG+VSLCLSENDDDD+LKLDP+YHNVEFLITTGPGPCPQLDS+NIVFGTVL
Sbjct: 181 DSFLLSHSRGGVVSLCLSENDDDDDLKLDPDYHNVEFLITTGPGPCPQLDSKNIVFGTVL 240

Query: 280 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKV 339
           EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYIS CGELKV
Sbjct: 241 EGLDVVAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISGCGELKV 300

Query: 340 AKPSLSPTLP 349
           AKPSLSPTLP
Sbjct: 301 AKPSLSPTLP 310

[Close]

BLAST of Cp4.1LG11g10330 vs. TAIR 10
Match: AT5G35100.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 359.4 bits (921), Expect = 3.3e-99
Identity = 190/299 (63.55%), Postives = 225/299 (75.25%), Query Frame = 0


Query: 54  AATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPSPASPSPDTTITDRV 113
           A++++L+PP             L RR+LLL   S +++TV  PPP+   PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLL---STTIATVTPPPPA-KPPSPDITITDRV 61

Query: 114 FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 173
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 174 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAV-RPPQQLPRNTETVKSDSFLLSHSRGG 233
            +SYK T VHKIFPGQ+FLAGRQ  GRRD   V    + LPRNT+ V S +FLL H+R G
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRDTAEVGYSLRDLPRNTDVVNSKAFLLPHARAG 181

Query: 234 IVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISS 293
           +VSLCLSENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS
Sbjct: 182 VVSLCLSENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISS 241

Query: 294 TPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 350
            PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSLSPTLP
Sbjct: 242 IPTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 281

[Close]

BLAST of Cp4.1LG11g10330 vs. TAIR 10
Match: AT5G35100.2 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-83
Identity = 170/298 (57.05%), Postives = 201/298 (67.45%), Query Frame = 0


Query: 54  AATAVLLPPHHHHRRRPAGDIALPRRSLLLLSTSLSLSTVVDPPPSPASPSPDTTITDRV 113
           A++++L+PP             L RR+LLL   S +++TV  PPP+   PSPD TITDRV
Sbjct: 2   ASSSILIPP------------ILTRRNLLL---STTIATVTPPPPA-KPPSPDITITDRV 61

Query: 114 FIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSC 173
           F+DFS+CPT F    + +     +  CSDS  LGR+VLGLYG  VPITV+ FK MCT S 
Sbjct: 62  FLDFSLCPTYF--RSDPSATLSSTTPCSDSTPLGRVVLGLYGRHVPITVSTFKRMCTSS- 121

Query: 174 GSSYKGTLVHKIFPGQFFLAGRQ--GRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGI 233
            +SYK T VHKIFPGQ+FLAGRQ  GRRD                               
Sbjct: 122 STSYKNTPVHKIFPGQYFLAGRQGGGRRD------------------------------- 181

Query: 234 VSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAISST 293
                +ENDDDD+++LDP+Y NVEFLITTGPGP PQLD  NIVFGTVLEGLDVV +ISS 
Sbjct: 182 ----TAENDDDDDIRLDPDYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSI 241

Query: 294 PTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAKPSLSPTLP 350
           PTYKPSE I+QFND A+FLGDERAQNAR++WNRPL+TV+IS CGELKV  PSLSPTLP
Sbjct: 242 PTYKPSENIKQFNDFAEFLGDERAQNARSLWNRPLKTVFISGCGELKVTNPSLSPTLP 245

[Close]

BLAST of Cp4.1LG11g10330 vs. TAIR 10
Match: AT5G13120.1 (cyclophilin 20-2 )

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-17
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 105 PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 164
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 84  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 143

Query: 165 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 224
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 144 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 203

Query: 225 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 284
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 204 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 258

Query: 285 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 342
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 264 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 258

[Close]

BLAST of Cp4.1LG11g10330 vs. TAIR 10
Match: AT5G13120.2 (cyclophilin 20-2 )

HSP 1 Score: 86.7 bits (213), Expect = 4.1e-17
Identity = 69/237 (29.11%), Postives = 106/237 (44.73%), Query Frame = 0


Query: 105 PDTTITDRVFIDFSICPTNFLPNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVAN 164
           P + IT +V+ D S+               G+ +      L GR+V+GLYG  VP TV N
Sbjct: 80  PQSKITHKVYFDISV---------------GNPV----GKLAGRIVIGLYGDDVPQTVEN 139

Query: 165 FKSMCTGSCGSSYKGTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLL 224
           F+++CTG  G  YKG+  H++    F + G  G  +KG     + +     T K ++F L
Sbjct: 140 FRALCTGEKGFGYKGSTFHRVI-RDFMIQG--GDFEKGNGTGGKSV--YGRTFKDENFKL 199

Query: 225 SHSRGGIVSLCLSENDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDV 284
           SH   G++S+              PN +  +F I T       LD  ++VFG V+EG++V
Sbjct: 200 SHVGPGVLSMA----------NAGPNTNGSQFFICT--IKTSWLDGRHVVFGQVIEGMEV 254

Query: 285 VAAISSTPTYKPSERIRQFNDLAKFLGDERAQNARTIWNRPLQTVYISDCGELKVAK 342
           V  I    T +               GD           RP + V I+DCG+L +++
Sbjct: 260 VKLIEEQETDR---------------GD-----------RPRKKVVIADCGQLPMSE 254

[Close]

BLAST of Cp4.1LG11g10330 vs. TAIR 10
Match: AT4G34960.1 (Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.6e-13
Identity = 70/245 (28.57%), Postives = 109/245 (44.49%), Query Frame = 0


Query: 68  RRPAGDIALPRRSLLLLSTSLSLSTVV--DPPPSPASPSPDTTITDRVFIDFSICPTNFL 127
           RR    +  PR  LLL++ ++ L   +             D  IT+RVF+D  I      
Sbjct: 2   RREISFLLQPRCLLLLVALTIFLVFALFNTGKDEEKQVIEDHEITNRVFLDVDI------ 61

Query: 128 PNRESADDGGDSILCSDSALLGRLVLGLYGHLVPITVANFKSMCTGSCGSS-------YK 187
                           D   LGR+V+GLYG +VP TV NF+++CTG  G +       YK
Sbjct: 62  ----------------DGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYK 121

Query: 188 GTLVHKIFPGQFFLAGRQGRRDKGAVRPPQQLPRNTETVKSDSFLLSHSRGGIVSLCLSE 247
           GT  H+I  G F + G  G    G  +    +     T   ++F + HS  G+V++    
Sbjct: 122 GTPFHRIISG-FVIQG--GDIIHGDGKSSDSIYGG--TFPDENFKIQHSHAGMVAMA--- 181

Query: 248 NDDDDELKLDPNYHNVEFLITTGPGPCPQLDSENIVFGTVLEGLDVVAAI---SSTPTYK 301
                     P+ +  +F ITT       L+ E++V G V++G+D V AI   + T + K
Sbjct: 182 -------NTGPDSNGSQFFITT--VKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGK 207

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g10330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65220	4.7e-98	63.55	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Arabidopsis thaliana...	[more]
Q9ASS6	5.8e-16	29.11	Photosynthetic NDH subunit of lumenal location 5, chloroplastic OS=Arabidopsis t...	[more]
Q01490	7.6e-16	32.82	Peptidyl-prolyl cis-trans isomerase B OS=Orpinomyces sp. (strain PC-2) OX=50059 ...	[more]
P18253	2.9e-15	33.33	Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
Q41651	4.9e-15	34.90	Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba OX=3906 PE=1 SV...	[more]

BLAST of Cp4.1LG11g10330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545629.1	7.44e-228	100.00	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita pepo subsp. ...	[more]
XP_022946676.1	2.47e-224	98.72	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita moschata] >X...	[more]
XP_022999012.1	7.09e-224	98.40	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Cucurbita maxima] >XP_...	[more]
KAG7030345.1	1.38e-223	98.71	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]
KAG6599358.1	3.76e-222	96.83	Peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic, partial [Cucurbita arg...	[more]

BLAST of Cp4.1LG11g10330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G4B4	1.20e-224	98.72	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita moschata O...	[more]
A0A6J1KIE5	3.43e-224	98.40	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucurbita maxima OX=...	[more]
A0A0A0LFD1	1.03e-206	90.65	PPIase cyclophilin-type domain-containing protein OS=Cucumis sativus OX=3659 GN=...	[more]
A0A5D3BI73	2.15e-206	90.00	Peptidyl-prolyl cis-trans isomerase CYP28 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C403	2.15e-206	90.00	peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic OS=Cucumis melo OX=3656...	[more]

BLAST of Cp4.1LG11g10330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35100.1	3.3e-99	63.55	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G35100.2	1.5e-83	57.05	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G13120.1	4.1e-17	29.11	cyclophilin 20-2	[more]
AT5G13120.2	4.1e-17	29.11	cyclophilin 20-2	[more]
AT4G34960.1	1.6e-13	28.57	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PRINTS	PR00153	CSAPPISMRASE	coord: 153..168 score: 40.36 coord: 182..194 score: 24.27 coord: 270..285 score: 46.32
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00160	Pro_isomerase	coord: 146..298 e-value: 1.6E-18 score: 67.5
IPR002130	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50072	CSA_PPIASE_2	coord: 146..336 score: 20.258257
IPR029000	Cyclophilin-like domain superfamily	GENE3D	2.40.100.10		coord: 102..309 e-value: 1.2E-27 score: 98.8
IPR029000	Cyclophilin-like domain superfamily	SUPERFAMILY	50891	Cyclophilin-like	coord: 145..337
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	CDD	cd00317	cyclophilin	coord: 147..301 e-value: 6.03211E-26 score: 99.2604
IPR044178	Peptidyl-prolyl cis-trans isomerase CYP28-like	PANTHER	PTHR47875	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP28, CHLOROPLASTIC	coord: 46..349

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g10330.1	Cp4.1LG11g10330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity