Cp4.1LG11g09900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g09900
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Alba domain-containing protein
Location	Cp4.1LG11: 8428301 .. 8429695 (+)
RNA-Seq Expression	Cp4.1LG11g09900
Synteny	Cp4.1LG11g09900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGGTATATATATACTAATCCTTCTTCTTTCGTTTGATTTTAATCACTGAGAATTCTGATTTTGTTCTGTTCTTGTTTCGTTCTCAAGAAATGGAATCGAAAATATATAATGTAAGAACGATCCATCAATCTGTGTTCTTCTTTTTGTGATCTGAACAAATTTACTGTTGATGATTGTTGGGATGGAGTTTGGCTAATTTAGGAAATGATCATAGGTTTAATTAAGCCTTTTGGGGAAACCAAAAGTCACGAGAACTCATGTTCAAAGTGGACAATATCATACTACTGTAGAGATTCGTGATTCCTAACATGATATAAGAGTCATGTCAAAGTAGATAATATCATACCATTGTGGAGAGTCTTGATTTTTAACATGGTATAAGAGTCATGTCAAAGTGGGTAATATCGTACTTTTGTGGAGAGTCATGATTTCTAACAGGGTATAAGAGTCATGTCAAAGTAGATAATATCACTCTATTGTGGAGAGTCGTGATTCCTAACATAGTATTAGAGTCATGCTCTTAACTTAGTTATGTTAATAGAATTTTCAAGCGTTGTATAATGAAGTTGTGAGCCTCGAAAATGTAGCCAAAAGTGACTCTCGAACAAAGGGTGTACTTTGTTCGAGGACTCCAGAAAAGGAGTTGAGCCTTGATTAACAGGAGGCTGTTCAAGGACTCCATAGGACTCGAGGGAGGCTCTATAGTGTACTTTGTTTGAGGTGATGATTGTTGAGAGGGGTTATGCTTCATACGAGGCCTTTTGGATAAACCAAAAGCAAAGTCATGAGAACTTTCATAATCATCCGATTTTGATTTTTCTATGTTGTTTGGTTGCTTTTGGTGACAACGAGTTTTTTACGTAATTGTTCTGATTCTTGATTCAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGGTACTGTTTTAATTTTCCTCTTATCGATATACATTGTTCTTGACGAATCATATCTGATAAACTTTTGGTTTTCTTGCATCGAATCCTTCGAATTGTTACAGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAGTAATTCTTTTTCTTCATCTTTAACACTAATTTTTGTTGGTAATATAAAATGGTGATGATTATTGATATTCGTATGGTTTTGCTATGAAATAGAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG

mRNA sequence

ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG

Coding sequence (CDS)

ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG

Protein sequence

MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK

Homology

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 9.7e-31
Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAK 107
           A EKK++TSTV +KD+ +GR VQKAK
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAK 99

[Close]

BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_022946134.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG7030319.1 hypothetical protein SDJN02_08666 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191 bits (486), Expect = 2.70e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_023521159.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (486), Expect = 3.39e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_023545391.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 191 bits (486), Expect = 4.38e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_022999100.1 (uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima])

HSP 1 Score: 190 bits (482), Expect = 1.29e-59
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: KAG6599323.1 (Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191 bits (486), Expect = 4.94e-54
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1G2Y0 (uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1)

HSP 1 Score: 191 bits (486), Expect = 1.31e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1KEC8 (uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1)

HSP 1 Score: 190 bits (482), Expect = 6.25e-60
Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1G2Y2 (uncharacterized protein At2g34160-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1)

HSP 1 Score: 170 bits (430), Expect = 3.31e-52
Identity = 97/106 (91.51%), Postives = 97/106 (91.51%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGM         EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGM---------EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 97

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1KC55 (uncharacterized protein At2g34160 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1)

HSP 1 Score: 168 bits (426), Expect = 1.57e-51
Identity = 96/106 (90.57%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MATMAVSGATAAATPTP AAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATMAVSGATAAATPTPVAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGM         EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGM---------EILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 97

[Close]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1)

HSP 1 Score: 166 bits (420), Expect = 8.84e-51
Identity = 95/106 (89.62%), Postives = 96/106 (90.57%), Query Frame = 0


Query: 1   MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60
           MAT+AVSGAT A         TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA
Sbjct: 1   MATIAVSGATPA---------TETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSA 60

Query: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 106
           LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK
Sbjct: 61  LGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 97

[Close]

BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 150.6 bits (379), Expect = 7.1e-37
Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 4   MAVSGATAAATPTPA-------------AAATETQKKNRIQVSNTKKPLFFYVNLAKRYI 63
           MA+  AT A  P P+              A  ET KKNRIQVSNTKKPLFFYVNLAKRYI
Sbjct: 1   MAMEVATPAPAPIPSERNIVLAPATTTTTATVETHKKNRIQVSNTKKPLFFYVNLAKRYI 60

Query: 64  QQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK 107
           QQHNEVELSALGMAITTVVTI+EILKNNGLATEKKVLTSTVGMKDE KG++VQKAK
Sbjct: 61  QQHNEVELSALGMAITTVVTISEILKNNGLATEKKVLTSTVGMKDETKGKMVQKAK 116

[Close]

BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           A +TQKKNRIQVSNTKKPLFFYVNLAKRY+QQ+ +VELSALGMAI TVVT+AEILKNNG 
Sbjct: 14  AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATVVTVAEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAK 107
           A EKK++TSTV +KD+++GR VQKAK
Sbjct: 74  AVEKKIMTSTVDIKDDSRGRPVQKAK 99

[Close]

BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein )

HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32
Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0


Query: 21  ATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGL 80
           AT++QKKNRIQVSNTKKPLFFYVNLAKRY+QQ+N+VELSALGMAI TVVT+ EILKNNG 
Sbjct: 14  ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATVVTVTEILKNNGF 73

Query: 81  ATEKKVLTSTVGMKDENKGRLVQKAK 107
           A EKK++TSTV +KD+ +GR VQKAK
Sbjct: 74  AVEKKIMTSTVDIKDDARGRPVQKAK 99

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22969	9.7e-31	79.07	Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 P...	[more]

BLAST of Cp4.1LG11g09900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022946134.1	2.70e-60	100.00	uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG70303...	[more]
XP_023521159.1	3.39e-60	100.00	uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023545391.1	4.38e-60	100.00	uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]	[more]
XP_022999100.1	1.29e-59	99.06	uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]	[more]
KAG6599323.1	4.94e-54	100.00	Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. s...	[more]

BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2Y0	1.31e-60	100.00	uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KEC8	6.25e-60	99.06	uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1G2Y2	3.31e-52	91.51	uncharacterized protein At2g34160-like isoform X2 OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1KC55	1.57e-51	90.57	uncharacterized protein At2g34160 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A5D3D4G4	8.84e-51	89.62	Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]

BLAST of Cp4.1LG11g09900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04620.1	7.1e-37	75.00	Alba DNA/RNA-binding protein	[more]
AT1G29250.1	6.9e-32	79.07	Alba DNA/RNA-binding protein	[more]
AT2G34160.1	6.9e-32	79.07	Alba DNA/RNA-binding protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PIRSF	PIRSF030333	UCP030333_Alba	coord: 1..106 e-value: 2.9E-51 score: 171.1
IPR014560	Uncharacterised conserved protein UCP030333, DNA/RNA-binding Alba-related	PANTHER	PTHR31947	DNA/RNA-BINDING PROTEIN ALBA 3	coord: 16..106
IPR002775	DNA/RNA-binding protein Alba-like	PFAM	PF01918	Alba	coord: 28..90 e-value: 1.4E-13 score: 50.4
IPR036882	Alba-like domain superfamily	GENE3D	3.30.110.20		coord: 26..106 e-value: 1.8E-42 score: 145.9
IPR036882	Alba-like domain superfamily	SUPERFAMILY	82704	AlbA-like	coord: 27..102
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR31947:SF31	BNAA09G03470D PROTEIN	coord: 16..106

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09900.1	Cp4.1LG11g09900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048235	pollen sperm cell differentiation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding