
Cp4.1LG11g09900 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGGTATATATATACTAATCCTTCTTCTTTCGTTTGATTTTAATCACTGAGAATTCTGATTTTGTTCTGTTCTTGTTTCGTTCTCAAGAAATGGAATCGAAAATATATAATGTAAGAACGATCCATCAATCTGTGTTCTTCTTTTTGTGATCTGAACAAATTTACTGTTGATGATTGTTGGGATGGAGTTTGGCTAATTTAGGAAATGATCATAGGTTTAATTAAGCCTTTTGGGGAAACCAAAAGTCACGAGAACTCATGTTCAAAGTGGACAATATCATACTACTGTAGAGATTCGTGATTCCTAACATGATATAAGAGTCATGTCAAAGTAGATAATATCATACCATTGTGGAGAGTCTTGATTTTTAACATGGTATAAGAGTCATGTCAAAGTGGGTAATATCGTACTTTTGTGGAGAGTCATGATTTCTAACAGGGTATAAGAGTCATGTCAAAGTAGATAATATCACTCTATTGTGGAGAGTCGTGATTCCTAACATAGTATTAGAGTCATGCTCTTAACTTAGTTATGTTAATAGAATTTTCAAGCGTTGTATAATGAAGTTGTGAGCCTCGAAAATGTAGCCAAAAGTGACTCTCGAACAAAGGGTGTACTTTGTTCGAGGACTCCAGAAAAGGAGTTGAGCCTTGATTAACAGGAGGCTGTTCAAGGACTCCATAGGACTCGAGGGAGGCTCTATAGTGTACTTTGTTTGAGGTGATGATTGTTGAGAGGGGTTATGCTTCATACGAGGCCTTTTGGATAAACCAAAAGCAAAGTCATGAGAACTTTCATAATCATCCGATTTTGATTTTTCTATGTTGTTTGGTTGCTTTTGGTGACAACGAGTTTTTTACGTAATTGTTCTGATTCTTGATTCAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGGTACTGTTTTAATTTTCCTCTTATCGATATACATTGTTCTTGACGAATCATATCTGATAAACTTTTGGTTTTCTTGCATCGAATCCTTCGAATTGTTACAGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAGTAATTCTTTTTCTTCATCTTTAACACTAATTTTTGTTGGTAATATAAAATGGTGATGATTATTGATATTCGTATGGTTTTGCTATGAAATAGAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG ATGGCGACGATGGCAGTTTCGGGAGCCACAGCCGCAGCCACCCCCACACCCGCGGCCGCCGCCACTGAAACACAGAAGAAGAACAGAATCCAGGTTTCCAACACCAAGAAACCCCTCTTCTTCTACGTTAATCTTGCTAAGAGGTACATTCAACAACACAATGAGGTGGAGCTTTCTGCCTTGGGAATGGCAATCACTACGGTTGTCACAATTGCAGAGATTCTAAAGAATAATGGACTGGCTACAGAGAAGAAAGTTTTGACTTCCACCGTGGGCATGAAAGATGAAAACAAAGGCCGTTTGGTTCAGAAAGCCAAG MATMAVSGATAAATPTPAAAATETQKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTIAEILKNNGLATEKKVLTSTVGMKDENKGRLVQKAK Homology
BLAST of Cp4.1LG11g09900 vs. ExPASy Swiss-Prot
Match: O22969 (Uncharacterized protein At2g34160 OS=Arabidopsis thaliana OX=3702 GN=At2g34160 PE=1 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 9.7e-31 Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_022946134.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita moschata] >KAG7030319.1 hypothetical protein SDJN02_08666 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191 bits (486), Expect = 2.70e-60 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_023521159.1 (uncharacterized protein At2g34160-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191 bits (486), Expect = 3.39e-60 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_023545391.1 (uncharacterized protein At2g34160-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 191 bits (486), Expect = 4.38e-60 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: XP_022999100.1 (uncharacterized protein At2g34160 isoform X1 [Cucurbita maxima]) HSP 1 Score: 190 bits (482), Expect = 1.29e-59 Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. NCBI nr
Match: KAG6599323.1 (Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 191 bits (486), Expect = 4.94e-54 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1G2Y0 (uncharacterized protein At2g34160-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1) HSP 1 Score: 191 bits (486), Expect = 1.31e-60 Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1KEC8 (uncharacterized protein At2g34160 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1) HSP 1 Score: 190 bits (482), Expect = 6.25e-60 Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1G2Y2 (uncharacterized protein At2g34160-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450305 PE=4 SV=1) HSP 1 Score: 170 bits (430), Expect = 3.31e-52 Identity = 97/106 (91.51%), Postives = 97/106 (91.51%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A6J1KC55 (uncharacterized protein At2g34160 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493582 PE=4 SV=1) HSP 1 Score: 168 bits (426), Expect = 1.57e-51 Identity = 96/106 (90.57%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. ExPASy TrEMBL
Match: A0A5D3D4G4 (Alba DNA/RNA-binding protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001630 PE=4 SV=1) HSP 1 Score: 166 bits (420), Expect = 8.84e-51 Identity = 95/106 (89.62%), Postives = 96/106 (90.57%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT3G04620.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 150.6 bits (379), Expect = 7.1e-37 Identity = 87/116 (75.00%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT1G29250.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32 Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0
BLAST of Cp4.1LG11g09900 vs. TAIR 10
Match: AT2G34160.1 (Alba DNA/RNA-binding protein ) HSP 1 Score: 134.0 bits (336), Expect = 6.9e-32 Identity = 68/86 (79.07%), Postives = 79/86 (91.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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