Cp4.1LG11g09890 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g09890
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	flowering locus K homology domain-like
Location	Cp4.1LG11: 8431854 .. 8437302 (+)
RNA-Seq Expression	Cp4.1LG11g09890
Synteny	Cp4.1LG11g09890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATAAGATAAAATCCACCGGCTCTCTCTGCCCTTGTGGTCGCACGCTCTCTTCTCTCTTTCTCTTCCTCGCCAAATATCTAAAACCCTAGAAGCCAACATTCGAGTTTCCAGTTCGAATCACTCCATTTTCTCCTTCTTCTTGTAGCTCTCCTCGATTCTTCTGTAGGTATGGAAAACTAAGCTTGCTTGCTTTGTGAATTATATGTTTGGGGTTTGTTTTTACCCGTTGTTTTTGTATGTTCTTGTGCTTTGGTGTGTGTTCCGTTCGTTTATTCAGTTTTTCTTTTGCTTTAATCTTTGTGATGCGAATTACGGTATGTTGGTAATTCGTTTGGTTTGTTAGGTTTCTTTTGTACGTTCTTTTGTCAACTGGATTGCGATACTACCGTTGTTATCTACTTCTAGAAACCAAAAACTTAAGCTGGATGGTTCCCTGTTGGAACTCGAGTAATGCATTTCTTATCAGTCATATCGCATGTTAATAGGAGTTTAGGCCTGGGTATTTTTATTTTTTGTTATTGTTTTTGAAGCNTCTTCTAGAAACCAAAAACTTAAGCTGGATGGTTCCCTGTTGGAACTCGAGTAATGCATTTCTTATCACTCATATCGCATGTTAATAGGAGTTTTTAGGCCTGGGTATTTTTATTTTTTGTTATTGTTTTTGAAGCTTTATGCATTGTACTTCATCCGAATGAGAGCATTTTTTTAACTTTTTTTTTTTTTTTACTGAATATGGTAGTTTTTTGCAGTTTGATCTGTAAGAAACACATGGCTGATGTGGATCAGAGCTATGTGCATGTCGATGATCATGAAGTAGATGAGAATGAGCAGATATATGAGAATGTTCAGGTACAGGACACTACACTGGAACAGGATAATACACAGGAGCCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGCAACCTTAGAGTCTGATGAGCCAAAACAAGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCCGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCCGCACAAAAAGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAGACGAGAGCTCGGATTAAAATTCTTGACGGTCCTCCAGGAACAGCAGAGAGAGCGGTAAGTTTTCTCTCCTTCAGATAAAAACTCTTCTCTAATAATTTAGCTAGTGTTTTGGTATAAATTATTTGGATTTAGGAGGGATTCTGATGATTTAATATCAAATTAACGTGATCTATCCACTTTCATTCTATCGTTATGGATGTTGACACTTAACTAAAAATTATTGTCCTAGGTTTTCTTGTTTTTTCATATTCTCAGTATGTATTGCACCTTGCTTCAAGGTAGGGAAATATTGGGCATTGCATGGCTTGATTAGCCCAATCTACCTGAGCATCAAGTTTGGGTGGTTATTAACTTTTTTAGTCAATTGTTTAATCTCTTTTGTACTTTTGGTTTGGCATATTCAAGAACGTGATATTAGTTATATGGCTGTGTAATGATGGAAACATGACACTGAAGATCCCTAGGAAAATTTCAGACTATAAAGCGTGCGTGAAATGTTATCATTAATAATTTGATTAGAACTTGTACTAAAAGCCATTAAATCATTGACTAAAATAATATGAAGTTGGATAATGTTCTAAAATGCTTCTGAGTCGTGGAAAAAACATTTGATTATATTAAACCACTCGGCACACTTAAAATGTTATATGCTAACACTAGTGGGGAAGATTGAGCTCCATCGTAGAAGGATATCTGTGCTTCTACACCCCATCGATGGGTGTTAGACATGATTCTCTTTCAGCTTATAACTGCCAAAAAGGAAATGTCCAGAAACTAAGATTGTCCCTTTAAACATGTAAAAATGACATTATAAACAAAACAAAAAGGAATCTAAGACTAATCCAGGTAATCCCAAAATATGGATACAGTTGCCTTGATTGTTGTAACCAAAAAATGAATCTGTGCAGGTTGTTTAAGGCAACGATTCAATCTTCAATAGGATTCCATATTTGAAGAACCAAAGATCCAGATGTGGGGATCAGCATTCAAGATTACAAAGTTCTGAAAAGTTGATCTGAATTACACGTAGGCATCTGGAACTTTGTGTACCATGAAGCACTGCAATATCTCTGGTAACTTCAGATCTGAAGATTGAGCAAGATTTCGAACGGGATGATAAATGTGAAAAATGGGGAAAACATAATGATAAATGTTAAGAGTTAAAAAAATTTAGTAATTTTAGAGATGTTTATAGACGACTAAAGATATGCATAGATAAAATGGACACTAAAAGTGCCAATCAATATCAAATAGAAGTTATATATTTTTGCTTATGCTTCTATTGTGTCTTTGCCAATAACAACTGGGTCTATAATTGAACATCATAATACTGTGAAAACCTGAACTCTAACATAATTATATTATCAAATTTCTTGGAACGTAGAAAGCTGGTTCCATNAAATAACTTCCATGTTCAAAAGTGGCTTACAAATTTCAACACTTGCTGCACGGTTCTTTTGATCCNTCCATGTTCAAAAATGGCTTACAAATTTCAACACTTGCTGCACGGTTCTTTTGATCCGTTATCTTCATATATATTTGCAGCCTCTAAGAGGTGTCTTACATGATGTATTGGAGGAAGAAATCACTCACTGTTTTGGTCCTTGCCTCATCAGATATATAGATTGGTGGACTATCTTTGAATTGTTTGATCTGCCTGATAGTTTTGACAACTTTATTATTTTAGTTGCAAGGTGCTCAAAATTCAACTAAGAGGTTAGGAAGGTTTGACGAGTAAGGGTTTGGGCATCTTGTGGGAGATCTGAATGAAAACTAATATGAGAAGCTTTTGAAGGCCACTGGTGTGCATGTATTGCGTGTACACTTTGTGGCATCCTTATTGTCCTAACTTGCAGATAAATGTAATTTTTCATTGTAGACCAACCAAATTGGAAGAGGGGCTCTTTTTTATTACATCCATTTCTTTCTTTGATTGGACGCACATCAGGATCCATAGTGCATTTAGCATTTGGTACATGTGGAAGTTTGTGCAAATAAACTTAAGTGCCTTGAATTGTGAAATTGTAGAAGTTTTGGCATGTTATTAGTTATTTTCTAATTGATGTTATGGACTAATTGTCTTTTCATTAGTTGGGAATTTCATGTGTTTTCCCTTGTCGTGAAGCTCAATTGCTGTCTCTGAAGTGTGATGGAGTATTTTTGCTTTCTAATTCTTTTACGAGTGTTTGTCTCTGTTGAGCGGAGAATTTCAGTTTCTTTTGCTTCTTACTACCATGATTTTCCCCTTGTTGTAGTTGGTCAATTTGTGATGAAATTTTTTAGTTCTGACTTGAAGGTATGCTTCATTTTTAAATAGGTAATGGTGTCTGCAAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGGCTTCTGAGGGTTCATAAACGCATTGTTGATGGTTTGGAGGGCGATAATGCTCACACTCCCAACATGGGTGGTAAAGTCTCAACGAGACTGTTAGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAAGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATTGTTAGAGTTCTTGGAACAGGTGAACTTCGATGGATGCCATTTGATTCTCTGCTTTAGTGTTCTTATGCCTGTCTATAAAAACATGTTTTTATTTTCTATGTATATCATTTGTTTCTGAATTGATAATTATATAGTTTTCCCTTTTTTAATCATCCATACTCTTGTCAACCGGAAATCACTGCAGAAGACTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAACAAGTGTGCACAAGGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATGTGAGTATGAATTCCTACTGATTTTTTAACCATTTCCTTTTTTACAAGTAATGAAGTCTCCATATTCCTGTTCTCCCATCCAACCCAAACGTCCAAAAATCAGATGCAGATGACAAATCCACAGATGGAGCACATGCCGCCACCACAACACCAACCTTGGGGCCCGCCTCAAGGAATTCCTCCAAATGCTGGTGGTGGTCCTGGCTTTGGACCAAATCCTCAATACATGCCACCACCTCGTCAATTCGACAGTTATTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGTGCCGTCAATTGTCACACAGGTTGGGATAAGCCTTCGAACTCCTATATTTGAATGTGGCTTTGCAAAAGAATGTTTTTCAAAAGTATTCTAATGCGGTGCTTGTGTTACATCCTTGTTTCTATTTCTANCTTTTTGAATGTTTTTCAAAAGTAATTCTAATGCGGTGCTTGTGTTACATCCTTGTTTCTATTTCTATCCCATTTTTTCATTGTAAGGTAAGAAACATGTTAATGATGCCCATCATCTGAGTGAGTTCAGAAGTGTTCGCTCACCAAACACTTCCCATTTGGCCTAATCCCATGGTTCCTCAGATATCCATTTACTCATAGCTGGTGAATAGTTTAAGATATTCCTAATGGTTTTTGTGTTGAACTTGCAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACCGCCGGTGCTAGCATAAGCTACATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACTAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAGTTCAAGCCGCCCAGCAGCTTATACAGGCAATTATTTTTTCTGGCTCTTTTCTGTTTTGCATCATCTTCAATATGAGGACTTTAGATATGATGTTAAGCTTGGATTTCTAGCTGTGTCGTAGTTCAGTCTGGCTGTGATCGATCAACTTGAAAATAACTTAATTTGAAGGGAACATGGATAGTTTTGAATGCAATCTATGAACATCCTTATTTAATTGTGTTGCAGAACTTTATGGCCGGTGCTGGAGCTTCAGCCCAGGCTCAAGCTGGGGGTTCGACAGACCAAGGCTACAATTCTTATGCTGGACATGGTTCGGTGTATGCGTCTCCACCTGCAAACCAGGCCCATGCTAGTCATGCTGGAGGGGGCTATGGCTCTGTGTACGGTACGAACTATGGGTACTAAGGCTCAGCCTTCATTCATACCCTCATCAATGTGTCAATCTGGTTGCGGTGAAACACTGGAAGTCCATCAGTACAAACATGTGTATCATGTAGCCTCCCTTTTAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

mRNA sequence

TATAAGATAAAATCCACCGGCTCTCTCTGCCCTTGTGGTCGCACGCTCTCTTCTCTCTTTCTCTTCCTCGCCAAATATCTAAAACCCTAGAAGCCAACATTCGAGTTTCCAGTTCGAATCACTCCATTTTCTCCTTCTTCTTGTAGCTCTCCTCGATTCTTCTGTAGTTTGATCTGTAAGAAACACATGGCTGATGTGGATCAGAGCTATGTGCATGTCGATGATCATGAAGTAGATGAGAATGAGCAGATATATGAGAATGTTCAGGTACAGGACACTACACTGGAACAGGATAATACACAGGAGCCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGCAACCTTAGAGTCTGATGAGCCAAAACAAGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCCGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCCGCACAAAAAGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAGACGAGAGCTCGGATTAAAATTCTTGACGGTCCTCCAGGAACAGCAGAGAGAGCGGTAATGGTGTCTGCAAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGGCTTCTGAGGGTTCATAAACGCATTGTTGATGGTTTGGAGGGCGATAATGCTCACACTCCCAACATGGGTGGTAAAGTCTCAACGAGACTGTTAGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAAGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATTGTTAGAGTTCTTGGAACAGAAGACTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAACAAGTGTGCACAAGGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATATGACAAATCCACAGATGGAGCACATGCCGCCACCACAACACCAACCTTGGGGCCCGCCTCAAGGAATTCCTCCAAATGCTGGTGGTGGTCCTGGCTTTGGACCAAATCCTCAATACATGCCACCACCTCGTCAATTCGACAGTTATTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGTGCCGTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACCGCCGGTGCTAGCATAAGCTACATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACTAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAACTTTATGGCCGGTGCTGGAGCTTCAGCCCAGGCTCAAGCTGGGGGTTCGACAGACCAAGGCTACAATTCTTATGCTGGACATGGTTCGGTGTATGCGTCTCCACCTGCAAACCAGGCCCATGCTAGTCATGCTGGAGGGGGCTATGGCTCTGTGTACGGTACGAACTATGGGTACTAAGGCTCAGCCTTCATTCATACCCTCATCAATGTGTCAATCTGGTTGCGGTGAAACACTGGAAGTCCATCAGTACAAACATGTGTATCATGTAGCCTCCCTTTTAATAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Coding sequence (CDS)

ATGGCTGATGTGGATCAGAGCTATGTGCATGTCGATGATCATGAAGTAGATGAGAATGAGCAGATATATGAGAATGTTCAGGTACAGGACACTACACTGGAACAGGATAATACACAGGAGCCAGAGAACTTGCACGAACTTCAGAATGAACACATACCAGCAACCTTAGAGTCTGATGAGCCAAAACAAGTGCATAATGAGGATCCTCTGGCTGTAGTAGGTGAGAAGAAGTGGCCCGGATGGCCAGGAGAGAGTGTTTTTCGAATGTTGGTTCCCGCACAAAAAGTTGGTAGTATAATTGGTCGCAAAGGTGAGTTTATCAAGAAAATAGTTGAGGAGACGAGAGCTCGGATTAAAATTCTTGACGGTCCTCCAGGAACAGCAGAGAGAGCGGTAATGGTGTCTGCAAAGGAGGAACCCGATTCTGCTTTTCCTCCTGCGGTGGATGGGCTTCTGAGGGTTCATAAACGCATTGTTGATGGTTTGGAGGGCGATAATGCTCACACTCCCAACATGGGTGGTAAAGTCTCAACGAGACTGTTAGTGGCAGCTTCACAAGCAGGAAGTTTAATTGGGAAGCAAGGAGGGACTGTTAAATCCATTCAAGAAGAGTCAAATTGTATTGTTAGAGTTCTTGGAACAGAAGACTTGCCTGTTTTTGCTCTCCAAGACGATAGAGTTGTTGAAGTACTAGGCGATCCAACAAGTGTGCACAAGGCAGTGGAACTCATTGCTTCTCATCTTAGAAAGTTTCTGGTTGACCGAAGTATTATCCCAGTTTTTGAAATGAATATGACAAATCCACAGATGGAGCACATGCCGCCACCACAACACCAACCTTGGGGCCCGCCTCAAGGAATTCCTCCAAATGCTGGTGGTGGTCCTGGCTTTGGACCAAATCCTCAATACATGCCACCACCTCGTCAATTCGACAGTTATTATCCACCTGCTGATATGCCATCGGTTATGGATAAGCAACCCCATCATGGAATTTCTGCTTATGGAAGGGAAGCTCCTATGGGTGTTCATGCAGCATCAAATGCACAGTCAGTGCCGTCAATTGTCACACAGACAACTCAACAAATGCAGATTCCATTATCTTTTGCTGATGCTGTTATTGGAACCGCCGGTGCTAGCATAAGCTACATTCGTCGTGCTAGTGGGGCAACTGTTACTATCCAAGAAACTAGGGGAGTCCCTGGGGAAATGACGGTAGAAATGAGTGGAACTGCTTCTCAAAACTTTATGGCCGGTGCTGGAGCTTCAGCCCAGGCTCAAGCTGGGGGTTCGACAGACCAAGGCTACAATTCTTATGCTGGACATGGTTCGGTGTATGCGTCTCCACCTGCAAACCAGGCCCATGCTAGTCATGCTGGAGGGGGCTATGGCTCTGTGTACGGTACGAACTATGGGTACTAA

Protein sequence

MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTNYGY

Homology

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BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot
Match: Q9SR13 (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 517.7 bits (1332), Expect = 1.4e-145
Identity = 315/496 (63.51%), Postives = 356/496 (71.77%), Query Frame = 0


Query: 5   DQSYVHVDDHEVDE---NEQIYENVQVQDTTLEQDNTQ-----EPENLHELQN-----EH 64
           DQ+   V DH  D+     Q  E  Q+QD   +Q   Q     +  N  E+Q+     E 
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  IPATLESDEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIV 124
           IP  LES + K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIV
Sbjct: 155 IPEHLESLQ-KSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIV 214

Query: 125 EETRARIKILDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPN 184
           EETRARIKILDGPPGT ERAVMVS KEEP+S+ PP++DGLLRVH RIVDGL+G+ +  P 
Sbjct: 215 EETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP- 274

Query: 185 MGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVL 244
              KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLG+EDLPVFALQDDRVVEV+
Sbjct: 275 PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVV 334

Query: 245 GDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMTNP--QMEHMPPPQHQPWGPPQGIPP 304
           G+PTSVH+A+ELIASHLRKFLVDRSIIP FE  M  P  QM+HMPPP HQ WGPPQG  P
Sbjct: 335 GEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPP-HQSWGPPQGHAP 394

Query: 305 NAGGGPGFGPN-PQYMPPPRQFDSYYPPADM-PSVMDKQPHHGISAYGREAPMGVHAASN 364
           + GGG G+G N P YM PP + DSYYPP +M    M+KQPH GISAYGRE PM VH +S 
Sbjct: 395 SVGGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS- 454

Query: 365 AQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEM 424
             + P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+
Sbjct: 455 --APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEV 514

Query: 425 SGTAS---------QNFM--AGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHAS 473
           SGT S         QNFM  AGA A AQ Q      QGYN YA HGSVYA+ P N     
Sbjct: 515 SGTGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP--- 574

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot
Match: Q9SZH4 (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 4.6e-64
Identity = 149/342 (43.57%), Postives = 211/342 (61.70%), Query Frame = 0


Query: 75  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 134
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 135 SAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVST-RLLVAASQAGSLIGK 194
           S KEEP++   PA+D +LRV +R+    + D+    N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 195 QGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLV 254
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 255 DRSIIPVFEMN-MTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDS 314
           D +++P+FE   +          P  +       I  N    P F    +  P   + DS
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 315 YYPPADMPSVMDKQPHHGISAYGREAPMGV-HAASNAQSVPSIVTQTTQQMQIPLSFADA 374
                  PS        G+S Y ++  +   H+   A+   + VTQ +Q MQIP S+A+ 
Sbjct: 304 RVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAED 363

Query: 375 VIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 414
           +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQ
Sbjct: 364 IIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQ 395

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot
Match: Q8W4B1 (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 2.8e-13
Identity = 87/354 (24.58%), Postives = 158/354 (44.63%), Query Frame = 0


Query: 67  EDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 126
           E P   VGE     +  E VF++L PA K+  ++G     I  +  E    +++ D   G
Sbjct: 310 EAPAVPVGENV---YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAG 369

Query: 127 TAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRLLVAASQ 186
           + E+ + +S++E PD  F PA + LL +  +I+D +       P+    ++TRLLV +  
Sbjct: 370 SDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLI-------PDKDNLITTRLLVPSRD 429

Query: 187 AGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVE---- 246
           +  L GK  G+V  I   +   V++L  E++P  A  +D V+++ G+  +  +A+     
Sbjct: 430 SICLEGK-AGSVSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTL 489

Query: 247 LIASHLRKFLVDRSIIPVFEMNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQ 306
           L+ SH+ K L                  +  PP      GP +G+   AG       N  
Sbjct: 490 LLRSHMFKEL----------------SQKETPPASTSTTGPLEGV---AGVMEVASSNNT 549

Query: 307 YMPPPRQFDSYYPPADMPSVMD--KQPHHGISAYGR-EAPMGVHAASNAQSVPSIVTQTT 366
                    S      + +++   K+    ++  G  E    V   ++  +VP +VT++T
Sbjct: 550 IQSREGPTSSNLNLQQVSTILPQFKEGFGSVAKAGESEHREEVPVTTSRMAVP-LVTRST 609

Query: 367 QQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 414
            ++ +P +    ++  +   ++ I   SGA+VTI E R    +  + +SGT  Q
Sbjct: 610 LEVVLPEAVVPKLVTKSRNKLAQISEWSGASVTIVEDRPEETQNIIRISGTPEQ 632

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot
Match: Q5E9A3 (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-13
Identity = 99/355 (27.89%), Postives = 154/355 (43.38%), Query Frame = 0


Query: 88  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSAFPPA 147
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 148 VDGLLRVHKRIVDGLEGD-NAHTPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 207
            + + +    I+D LE D N+   N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 208 EESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFE 267
           E +   V+V G     +     +R + + G P SV + V+ I             + + E
Sbjct: 137 ESTGAQVQVAG----DMLPNSTERAITIAGVPQSVTECVKQIC------------LVMLE 196

Query: 268 MNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSV 327
               +PQ   M  P +QP  P       AGG         Y  P    D   PP D  S+
Sbjct: 197 TLSQSPQGRVMTIP-YQPM-PASSPVICAGGQDRCSDAAGY--PHATHDLEGPPLDAYSI 256

Query: 328 ----------------MDKQPHHGISAYGREAPMGVHAAS----NAQSVPSIVTQTTQQM 387
                           + +Q  H    +G     G+ ++S       +     TQTT ++
Sbjct: 257 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 316

Query: 388 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 418
            IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot
Match: Q15365 (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 4.8e-13
Identity = 99/355 (27.89%), Postives = 154/355 (43.38%), Query Frame = 0


Query: 88  RMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSAFPPA 147
           R+L+  ++VGSIIG+KGE +K+I EE+ ARI I +G     ER + ++            
Sbjct: 17  RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTG----------P 76

Query: 148 VDGLLRVHKRIVDGLEGD-NAHTPNMGG----KVSTRLLVAASQAGSLIGKQGGTVKSIQ 207
            + + +    I+D LE D N+   N        V+ RL+V A+Q GSLIGK G  +K I+
Sbjct: 77  TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 136

Query: 208 EESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLVDRSIIPVFE 267
           E +   V+V G     +     +R + + G P SV + V+ I             + + E
Sbjct: 137 ESTGAQVQVAG----DMLPNSTERAITIAGVPQSVTECVKQIC------------LVMLE 196

Query: 268 MNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPPADMPSV 327
               +PQ   M  P +QP  P       AGG         Y  P    D   PP D  S+
Sbjct: 197 TLSQSPQGRVMTIP-YQPM-PASSPVICAGGQDRCSDAAGY--PHATHDLEGPPLDAYSI 256

Query: 328 ----------------MDKQPHHGISAYGREAPMGVHAAS----NAQSVPSIVTQTTQQM 387
                           + +Q  H    +G     G+ ++S       +     TQTT ++
Sbjct: 257 QGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHEL 316

Query: 388 QIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQNFMA 418
            IP +    +IG  GA+I+ IR+ SGA + I           V ++G+A+   +A
Sbjct: 317 TIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLA 339

[Close]

BLAST of Cp4.1LG11g09890 vs. NCBI nr
Match: XP_023546728.1 (flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_023546729.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_023546731.1 flowering locus K homology domain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 905 bits (2340), Expect = 0.0
Identity = 472/483 (97.72%), Postives = 472/483 (97.72%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 472
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 480

[Close]

BLAST of Cp4.1LG11g09890 vs. NCBI nr
Match: XP_022946120.1 (flowering locus K homology domain-like [Cucurbita moschata] >XP_022946121.1 flowering locus K homology domain-like [Cucurbita moschata] >XP_022946122.1 flowering locus K homology domain-like [Cucurbita moschata])

HSP 1 Score: 902 bits (2330), Expect = 0.0
Identity = 470/483 (97.31%), Postives = 470/483 (97.31%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 472
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 480

[Close]

BLAST of Cp4.1LG11g09890 vs. NCBI nr
Match: KAG6599323.1 (Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 899 bits (2324), Expect = 0.0
Identity = 469/482 (97.30%), Postives = 469/482 (97.30%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE
Sbjct: 229 MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 288

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 289 PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 348

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 349 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDNAHAPNMGGKVSTRL 408

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 409 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 468

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 469 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 528

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 529 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 588

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 589 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 648

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 471
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN
Sbjct: 649 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 708

[Close]

BLAST of Cp4.1LG11g09890 vs. NCBI nr
Match: XP_022999078.1 (flowering locus K homology domain-like [Cucurbita maxima] >XP_022999079.1 flowering locus K homology domain-like [Cucurbita maxima] >XP_022999081.1 flowering locus K homology domain-like [Cucurbita maxima])

HSP 1 Score: 894 bits (2311), Expect = 0.0
Identity = 467/483 (96.69%), Postives = 467/483 (96.69%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPAT  SDE
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATSGSDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 472
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASH GG YGSVYGTN
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHVGGDYGSVYGTN 480

[Close]

BLAST of Cp4.1LG11g09890 vs. NCBI nr
Match: KAG7030320.1 (Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 890 bits (2301), Expect = 0.0
Identity = 470/512 (91.80%), Postives = 470/512 (91.80%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE
Sbjct: 13  MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 72

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 73  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 132

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 133 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDNAHAPNMGGKVSTRL 192

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 193 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 252

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 253 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 312

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 313 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 372

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 373 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 432

Query: 421 ---------------------------------NFMAGAGASAQAQAGGSTDQGYNSYAG 472
                                            NFMAGAGASAQAQAGGSTDQGYNSYAG
Sbjct: 433 QLIQAIIFSGSFLFCIIFNMRTLDMMFKLEFLANFMAGAGASAQAQAGGSTDQGYNSYAG 492

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL
Match: A0A6J1G2W6 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111450297 PE=4 SV=1)

HSP 1 Score: 902 bits (2330), Expect = 0.0
Identity = 470/483 (97.31%), Postives = 470/483 (97.31%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVH RIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHNRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 472
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 480

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL
Match: A0A6J1KG23 (flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC111493565 PE=4 SV=1)

HSP 1 Score: 894 bits (2311), Expect = 0.0
Identity = 467/483 (96.69%), Postives = 467/483 (96.69%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPAT  SDE
Sbjct: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATSGSDE 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
           PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAH PNMGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT
Sbjct: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSVYGTN 472
               NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASH GG YGSVYGTN
Sbjct: 421 QLIQNFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHVGGDYGSVYGTN 480

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL
Match: A0A6J1CPP3 (flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036 PE=4 SV=1)

HSP 1 Score: 807 bits (2084), Expect = 1.40e-292
Identity = 430/485 (88.66%), Postives = 447/485 (92.16%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESDE 60
           MADVDQ+Y HV+D++VDEN QIYEN Q QD TLEQDN QEPE LHEL+NEH+  TLE ++
Sbjct: 1   MADVDQNYTHVEDNQVDENTQIYENAQGQDNTLEQDNAQEPEPLHELENEHVQETLEPEQ 60

Query: 61  PKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120
            KQVHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI
Sbjct: 61  -KQVHNEDSLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKI 120

Query: 121 LDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRL 180
           LDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNAH P+MGGKVSTRL
Sbjct: 121 LDGPPGTAERAVMVSAKEEPDSTFPPAVDGLLRVHKRIVDGLEGDNAHAPSMGGKVSTRL 180

Query: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKA 240
           LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDP  VHKA
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240

Query: 241 VELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFG 300
           VELIASHLRKFLVDRSIIPVFEMNM  +NPQM+HMPPP HQ WGPPQG+PPNAGGGPGFG
Sbjct: 241 VELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDHMPPP-HQSWGPPQGMPPNAGGGPGFG 300

Query: 301 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQT 360
           PNPQYMPPPRQFD+YYPPADMPSVMDKQPHHGISAYGREAPMGVHA+SNAQ+ PSIVTQT
Sbjct: 301 PNPQYMPPPRQFDNYYPPADMPSVMDKQPHHGISAYGREAPMGVHASSNAQAAPSIVTQT 360

Query: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ----- 420
           TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ     
Sbjct: 361 TQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQVQAAQ 420

Query: 421 ----NFMAGAGASAQAQAGGSTDQGYNSYAG-HGSVYASPPANQA-HASHAGGGYGSVYG 472
               NFMAGAGA AQAQAG +TDQGYNSYA  HGSVYASPPAN A HA HAGG YGSVYG
Sbjct: 421 QLIQNFMAGAGAPAQAQAGATTDQGYNSYAAAHGSVYASPPANPAAHAGHAGG-YGSVYG 480

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL
Match: A0A6J1FHB5 (flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC111444152 PE=4 SV=1)

HSP 1 Score: 799 bits (2064), Expect = 1.88e-289
Identity = 431/490 (87.96%), Postives = 444/490 (90.61%), Query Frame = 0


Query: 1   MADVDQSYVHVDDHEVDE------NEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPA 60
           MADV+QSY HVDD+EVDE      N QIYEN QVQD TLEQ++T+EPENLH L+NE+ P 
Sbjct: 1   MADVEQSYTHVDDNEVDETAQIYENAQIYENAQVQDNTLEQESTEEPENLHGLENENGPE 60

Query: 61  TLESDEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120
           TLE  EPK+VHNED LAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET
Sbjct: 61  TLEL-EPKEVHNEDTLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEET 120

Query: 121 RARIKILDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGG 180
           RARIKILDGPPGTAERAVMVSAKEEPDS FPPAVDGLLRVHKRIVDGLEGDNA+ PNMGG
Sbjct: 121 RARIKILDGPPGTAERAVMVSAKEEPDSDFPPAVDGLLRVHKRIVDGLEGDNANAPNMGG 180

Query: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDP 240
           KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDP
Sbjct: 181 KVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDP 240

Query: 241 TSVHKAVELIASHLRKFLVDRSIIPVFEMNM--TNPQMEHMPPPQHQPWGPPQGIPPNAG 300
             VHKAVELIASHLRKFLVDRSIIPVFEMNM  TN QMEHMPPP HQ WGPPQG+PPNAG
Sbjct: 241 AGVHKAVELIASHLRKFLVDRSIIPVFEMNMQMTNQQMEHMPPP-HQSWGPPQGMPPNAG 300

Query: 301 GGPGFGPNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVP 360
           GGPGFGPNP YMPPPRQFD+YYPPADMPS MDKQPHHGISAYGREAPMGVH  +NAQSVP
Sbjct: 301 GGPGFGPNPPYMPPPRQFDNYYPPADMPSAMDKQPHHGISAYGREAPMGVHPQTNAQSVP 360

Query: 361 SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS 420
           SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS
Sbjct: 361 SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS 420

Query: 421 Q---------NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPA-NQAHASHAGGGY 472
           Q         NFMAGAGA AQ QAGGS DQGYNSYA HGSVYASPPA N AHASHAGG Y
Sbjct: 421 QVQAAQQLIQNFMAGAGAPAQTQAGGSADQGYNSYAAHGSVYASPPAANPAHASHAGG-Y 480

[Close]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL
Match: A0A5D3D4G7 (Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001640 PE=4 SV=1)

HSP 1 Score: 797 bits (2058), Expect = 1.33e-288
Identity = 432/487 (88.71%), Postives = 445/487 (91.38%), Query Frame = 0


Query: 1   MADVDQSYVHV-DDHEVDENEQIYENVQVQDTTLEQDNTQEPENLHELQNEHIPATLESD 60
           MADV+Q+Y HV DD +VDEN QIYEN QV D TLEQ+NTQE ENLHELQNEHIP TLES 
Sbjct: 1   MADVEQNYTHVVDDDQVDENAQIYENAQVHDITLEQENTQEVENLHELQNEHIPETLES- 60

Query: 61  EPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 120
           EPKQVHNEDPL VV EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK
Sbjct: 61  EPKQVHNEDPLTVVSEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIK 120

Query: 121 ILDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTR 180
           ILDGPPGTAERAVMVSAK+EPDSAFPPAVDGLLRVHKRIVDGLEGDNAH PN G KVSTR
Sbjct: 121 ILDGPPGTAERAVMVSAKDEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTR 180

Query: 181 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHK 240
           LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLG+EDLPVFALQDDRVVEVLGDP  VHK
Sbjct: 181 LLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHK 240

Query: 241 AVELIASHLRKFLVDRSIIPVFEMNM--TNPQME-HMPPPQHQPWGPPQGIPPNAGGGPG 300
           AVELIASHLRKFLVDRSIIPVFEMNM  +NPQM+ HMPPP HQPWGPPQG+PPNAGGGPG
Sbjct: 241 AVELIASHLRKFLVDRSIIPVFEMNMQMSNPQMDQHMPPPPHQPWGPPQGMPPNAGGGPG 300

Query: 301 FGPNP-QYMPPP-RQFDSYYPPADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSI 360
           FGPNP QYMPPP RQFD+YYPPA+M +VMDKQPHHGISAYGREAPMGVHAASNAQS PSI
Sbjct: 301 FGPNPPQYMPPPPRQFDNYYPPAEMQAVMDKQPHHGISAYGREAPMGVHAASNAQSAPSI 360

Query: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ- 420
           VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 
Sbjct: 361 VTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQV 420

Query: 421 --------NFMAGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHASHAGGGYGSV 472
                   NFMAGAGA AQ QAG STDQGYNSYA HGSVYASPPAN A  +HAGG YGSV
Sbjct: 421 QAAQQLIQNFMAGAGAPAQPQAGVSTDQGYNSYAAHGSVYASPPANPA--AHAGG-YGSV 480

[Close]

BLAST of Cp4.1LG11g09890 vs. TAIR 10
Match: AT3G04610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 517.7 bits (1332), Expect = 9.8e-147
Identity = 315/496 (63.51%), Postives = 356/496 (71.77%), Query Frame = 0


Query: 5   DQSYVHVDDHEVDE---NEQIYENVQVQDTTLEQDNTQ-----EPENLHELQN-----EH 64
           DQ+   V DH  D+     Q  E  Q+QD   +Q   Q     +  N  E+Q+     E 
Sbjct: 95  DQANEDVQDHSQDDLQYQPQNQEQFQLQDEAHDQAQYQAQGDVQDHNGDEVQDKVEDEEG 154

Query: 65  IPATLESDEPKQVHNEDPLAVVGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIV 124
           IP  LES + K    ED      EK+WPGWPGE+VFRMLVPAQKVGSIIGRKG+ IKKIV
Sbjct: 155 IPEHLESLQ-KSEPEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIV 214

Query: 125 EETRARIKILDGPPGTAERAVMVSAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPN 184
           EETRARIKILDGPPGT ERAVMVS KEEP+S+ PP++DGLLRVH RIVDGL+G+ +  P 
Sbjct: 215 EETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP- 274

Query: 185 MGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVL 244
              KVSTRLLV ASQAGSLIGKQGGTVK+IQE S CIVRVLG+EDLPVFALQDDRVVEV+
Sbjct: 275 PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVV 334

Query: 245 GDPTSVHKAVELIASHLRKFLVDRSIIPVFEMNMTNP--QMEHMPPPQHQPWGPPQGIPP 304
           G+PTSVH+A+ELIASHLRKFLVDRSIIP FE  M  P  QM+HMPPP HQ WGPPQG  P
Sbjct: 335 GEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPTRQMDHMPPP-HQSWGPPQGHAP 394

Query: 305 NAGGGPGFGPN-PQYMPPPRQFDSYYPPADM-PSVMDKQPHHGISAYGREAPMGVHAASN 364
           + GGG G+G N P YM PP + DSYYPP +M    M+KQPH GISAYGRE PM VH +S 
Sbjct: 395 SVGGG-GYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS- 454

Query: 365 AQSVPSIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEM 424
             + P +  Q TQQMQIPLS+ADAVIGT+G++ISY RR SGATVTIQETRGVPGEMTVE+
Sbjct: 455 --APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEV 514

Query: 425 SGTAS---------QNFM--AGAGASAQAQAGGSTDQGYNSYAGHGSVYASPPANQAHAS 473
           SGT S         QNFM  AGA A AQ Q      QGYN YA HGSVYA+ P N     
Sbjct: 515 SGTGSQVQTAVQLIQNFMAEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNPP--- 574

[Close]

BLAST of Cp4.1LG11g09890 vs. TAIR 10
Match: AT4G26000.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 246.9 bits (629), Expect = 3.2e-65
Identity = 149/342 (43.57%), Postives = 211/342 (61.70%), Query Frame = 0


Query: 75  EKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV 134
           E++WPGWPG+ VFRM+VP  KVG+IIGRKG+FIKK+ EETRARIK+LDGP  T +R V++
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 135 SAKEEPDSAFPPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVST-RLLVAASQAGSLIGK 194
           S KEEP++   PA+D +LRV +R+    + D+    N G   S+ RLLVA++QA +LIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 195 QGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLV 254
           QG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+   + KA+E I  HLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 255 DRSIIPVFEMN-MTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDS 314
           D +++P+FE   +          P  +       I  N    P F    +  P   + DS
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNL-MEPDFSLLARREPLFLERDS 303

Query: 315 YYPPADMPSVMDKQPHHGISAYGREAPMGV-HAASNAQSVPSIVTQTTQQMQIPLSFADA 374
                  PS        G+S Y ++  +   H+   A+   + VTQ +Q MQIP S+A+ 
Sbjct: 304 RVDSRVQPS--------GVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAED 363

Query: 375 VIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTASQ 414
           +IG  GA+I+YIRR SGAT+TI+E+   P ++TVE+ GT SQ
Sbjct: 364 IIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQ 395

[Close]

BLAST of Cp4.1LG11g09890 vs. TAIR 10
Match: AT1G51580.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.4e-23
Identity = 106/365 (29.04%), Postives = 164/365 (44.93%), Query Frame = 0


Query: 73  VGEKKWPGWPGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAV 132
           VG    P    E  FR+L PA KVGS+IG+ G  ++ +  E+ A IK+ D    + ER +
Sbjct: 264 VGPFNRPVVEEEVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERII 323

Query: 133 MVSAKEEPDSAFPPAVDGLLRVHKRIVD-GLEGDNAHTPNMGGKVSTRLLVAASQAGSLI 192
           ++SA+E  +     A DG++RVH RIV+ G E   A        V  RLLV +   G L+
Sbjct: 324 VISARENLERRHSLAQDGVMRVHNRIVEIGFEPSAA--------VVARLLVHSPYIGRLL 383

Query: 193 GKQGGTVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKF 252
           GK G  +  ++  +   +RV   +    +  Q D +V+V+G+  +V  A+  I   LR+ 
Sbjct: 384 GKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREA 443

Query: 253 LVDRSIIPVFEMN-----MTNPQMEHMPP--PQHQPWGPPQGIPP------NAGGGPGFG 312
           +     +P   M         P  E  PP  P+  P  P +   P          GPGF 
Sbjct: 444 MFP-GRLPFQGMGGPPPPFMGPYPEPPPPFGPRQYPASPDRYHSPVGPFHERHCHGPGFD 503

Query: 313 PNPQYMPPPRQFDSYYPPADMPSVMDKQPHHGISAY-GREAPMGVHAASNAQSVP----- 372
                 PP   FD        PS M   P  GI  + G   P  V+     ++ P     
Sbjct: 504 -----RPPGPGFDR------PPSPMSWTPQPGIDGHPGGMVPPDVNHGFALRNEPIGSEN 563

Query: 373 SIVTQTTQQMQIPLSFADAVIGTAGASISYIRRASGATVTIQETRGVPGEMTVEMSGTAS 418
            ++T    ++ IP ++   V G   ++++YI++ SGA V + + +    E  V +SGT+ 
Sbjct: 564 PVMTSANVEIVIPQAYLGHVYGENCSNLNYIKQVSGANVVVHDPKAGTTEGLVVVSGTSD 608

[Close]

BLAST of Cp4.1LG11g09890 vs. TAIR 10
Match: AT5G15270.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 102.8 bits (255), Expect = 7.6e-22
Identity = 84/332 (25.30%), Postives = 154/332 (46.39%), Query Frame = 0


Query: 84  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSA 143
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 144 F-------PPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRLLVAASQAGSLIGKQGG 203
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 204 TVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLVDRS 263
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 264 IIPVFEMNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPP 323
                     NP                Q +  ++GG P                S    
Sbjct: 229 ----------NPSRS-------------QNLLSSSGGYPA--------------GSLMSH 288

Query: 324 ADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQTTQQMQIPLSFADAVIGTA 383
           A  P ++   P  G  +YGR+A                 T+   ++  P+    +VIG  
Sbjct: 289 AGGPRLVGLAPLMG--SYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKG 334

Query: 384 GASISYIRRASGATVTIQETRGVPGEMTVEMS 409
           GA I+ +R+ + AT+ +  +R    +  + +S
Sbjct: 349 GALINQLRQETRATIKVDSSRTEGNDCLITIS 334

[Close]

BLAST of Cp4.1LG11g09890 vs. TAIR 10
Match: AT5G15270.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 102.8 bits (255), Expect = 7.6e-22
Identity = 84/332 (25.30%), Postives = 154/332 (46.39%), Query Frame = 0


Query: 84  ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSA 143
           ++VFR L P +K+GS+IGR G+ +K++  +TR++I+I +  PG  ER + + +  +  +A
Sbjct: 49  DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNA 108

Query: 144 F-------PPAVDGLLRVHKRIVDGLEGDNAHTPNMGGKVSTRLLVAASQAGSLIGKQGG 203
           F        PA D L R+H R+V   +  +  +P    +V+ +LLV + Q G ++G+ G 
Sbjct: 109 FGDGEKVLSPAQDALFRIHDRVVAD-DARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQ 168

Query: 204 TVKSIQEESNCIVRVLGTEDLPVFALQDDRVVEVLGDPTSVHKAVELIASHLRKFLVDRS 263
            V++I+ E+   +R++   ++P+ AL  D ++++ G+   V KA+  IAS L +      
Sbjct: 169 IVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE------ 228

Query: 264 IIPVFEMNMTNPQMEHMPPPQHQPWGPPQGIPPNAGGGPGFGPNPQYMPPPRQFDSYYPP 323
                     NP                Q +  ++GG P                S    
Sbjct: 229 ----------NPSRS-------------QNLLSSSGGYPA--------------GSLMSH 288

Query: 324 ADMPSVMDKQPHHGISAYGREAPMGVHAASNAQSVPSIVTQTTQQMQIPLSFADAVIGTA 383
           A  P ++   P  G  +YGR+A                 T+   ++  P+    +VIG  
Sbjct: 289 AGGPRLVGLAPLMG--SYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKG 334

Query: 384 GASISYIRRASGATVTIQETRGVPGEMTVEMS 409
           GA I+ +R+ + AT+ +  +R    +  + +S
Sbjct: 349 GALINQLRQETRATIKVDSSRTEGNDCLITIS 334

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g09890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR13	1.4e-145	63.51	Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV...	[more]
Q9SZH4	4.6e-64	43.57	RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 ...	[more]
Q8W4B1	2.8e-13	24.58	RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q5E9A3	4.8e-13	27.89	Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1	[more]
Q15365	4.8e-13	27.89	Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2	[more]

BLAST of Cp4.1LG11g09890 vs. NCBI nr


Match Name	Identity	Description
XP_023546728.1	97.72	flowering locus K homology domain-like [Cucurbita pepo subsp. pepo] >XP_02354672...	[more]
XP_022946120.1	97.31	flowering locus K homology domain-like [Cucurbita moschata] >XP_022946121.1 flow...	[more]
KAG6599323.1	97.30	Flowering locus K-likey domain protein, partial [Cucurbita argyrosperma subsp. s...	[more]
XP_022999078.1	96.69	flowering locus K homology domain-like [Cucurbita maxima] >XP_022999079.1 flower...	[more]
KAG7030320.1	91.80	Flowering locus K-likey domain protein [Cucurbita argyrosperma subsp. argyrosper...	[more]

BLAST of Cp4.1LG11g09890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2W6	0.0	97.31	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1KG23	0.0	96.69	flowering locus K homology domain-like OS=Cucurbita maxima OX=3661 GN=LOC1114935...	[more]
A0A6J1CPP3	1.40e-292	88.66	flowering locus K homology domain OS=Momordica charantia OX=3673 GN=LOC111013036...	[more]
A0A6J1FHB5	1.88e-289	87.96	flowering locus K homology domain-like OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]
A0A5D3D4G7	1.33e-288	88.71	Flowering locus K-like proteiny domain isoform X1 OS=Cucumis melo var. makuwa OX...	[more]

BLAST of Cp4.1LG11g09890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04610.1	9.8e-147	63.51	RNA-binding KH domain-containing protein	[more]
AT4G26000.1	3.2e-65	43.57	RNA-binding KH domain-containing protein	[more]
AT1G51580.1	1.4e-23	29.04	RNA-binding KH domain-containing protein	[more]
AT5G15270.2	7.6e-22	25.30	RNA-binding KH domain-containing protein	[more]
AT5G15270.1	7.6e-22	25.30	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 356..426 e-value: 0.0014 score: 27.9 coord: 83..163 e-value: 3.4E-8 score: 43.2 coord: 174..249 e-value: 2.8E-13 score: 60.1
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 178..245 e-value: 1.1E-14 score: 54.0 coord: 359..412 e-value: 1.2E-6 score: 28.2 coord: 87..139 e-value: 2.3E-12 score: 46.5
None	No IPR available	GENE3D	3.30.310.210		coord: 84..254 e-value: 2.7E-36 score: 126.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..290
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 26..448
None	No IPR available	PANTHER	PTHR10288:SF259	POLY(RC)-BINDING-LIKE PROTEIN	coord: 26..448
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 84..151 score: 14.15183
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 357..423 score: 11.133129
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 175..244 score: 15.66118
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 177..245 e-value: 3.91036E-20 score: 82.1391
None	No IPR available	CDD	cd02396	PCBP_like_KH	coord: 86..155 e-value: 6.91046E-19 score: 78.2871
None	No IPR available	CDD	cd00105	KH-I	coord: 359..413 e-value: 7.37172E-8 score: 47.1695
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 346..420 e-value: 4.2E-9 score: 38.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 78..138
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 347..417
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 167..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g09890.1	Cp4.1LG11g09890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding