Cp4.1LG11g08960 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08960
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	TPR_REGION domain-containing protein
Location	Cp4.1LG11: 7233969 .. 7237846 (-)
RNA-Seq Expression	Cp4.1LG11g08960
Synteny	Cp4.1LG11g08960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCTTCATCATCTGAGAAATGGACGGTGCAGAGCCATCGTCTCCAAATTCTCACAAGCACTCCCTTGCTGAGCACAATCTTCTTCAACTTCATCGCGTTCTTCATCAATGGCTGCAATTTCCAATCTCAAACCCTCCATTTCCATGTCCCGTTCGTTTCACATATCTTTCACCGCGCCTTCTTTGCCAAATTCAACTAAACCCCTCGAAAATCTCCACTCTCCGACCTCGTTTCCAATGAAAATCAAGCTCAATCACGTTCCTCCATTATCATTATCTAGAAGATTGTTCGTTCCTTCCGTCTCTGGAATTTGGGACGCCCTAACAGGGGGAAACAACCCTCGCGACGCTGTTACTGCTATTCGACGCGGAATGCTTCTCTTCAGAGAGGTAAATTTTTCTTTCAACTCACGTAATAATGCTTCGTTTATCAGAATTTTCGATTTGAATACGTGTAAATTTTGTTGGTTTTAAGGGCGATGTTTCAGGATCTTTAGCAGAATTCGATAAGGCAATCGAGTTGGATCCTCGTCAAAAGGCATGTAGGTTCCTACACCTCGCGGCGATGTTAGTAGTTTAGTTTGAATATTCAAATTGATTTTGTGAGATTAACTATCAACCAGTTTGTTTATAAATTAAGTTCTGAATGGTAACGAATAGAGATATCTTGCTTTAGAGATAATTGGATGATGAGGAGTTAGGGTTAGGGATTTATTCTTAATTCTTAGCAGTGCATTGTTTAACTAATATGGATTTTCTTTATGGTTGCTATCAGATCTTTGGCAAAGAGGGCTTTCACTTTACTATCTTGATAGGTACTGATCTGCCCCAATTTTCCTTTTATGCTACATTTATGATAGGAAGAAATGCAGAAGTTTTGAGTTAAACTAGAATCTGCTGAGTTATGCATTGGTATGAATGAATTCATGTAAATTTGGATGAATATGAATAGTTGAAGTAGGAATTCCATTTTTAGATTTGACGAGGGAGCCGAGCAGTTCCGACTAGATGTTGCACAAAATCCGAACGACACAGAGGAATCTATTTGGTGCTTTGTTTGTGAAGCTCAATTGTATGGAGTTGATGAAGCAAGAAGGCGATTTCTTGAGGTAAGCTAATATTTATGAGATGATAAAAGCAGGGATGAAATATTGCTATATGATTATAAGAGTAACTTAGTGAGTTTGAGATGAATTATGAGAGTTCGTGTTCTTGAGTTAAGCACCTCTTTCATAATCATTATAGCAAACTCATCCTAAATCATGTTTGGAAGTTTGAATCATGGGTTTAGGTAGGTAGAGATCCACGACCAGTCATGAGGGAAGCTTATAATATGTTTAAAGATGGTGGCCATCCTGAGAAAGTATGAAACTTCTCTCTATTTTCCTCTATCTTCAATTCTTCTTTTCAGTCATTTGATCATTACAACTTCCATGTTCAATTGGGGTTTCTGGTTTTTTCAAATGTATGCTTCTTTTTTTTAAATGATTTTCGATAAAGTTGACAAACCCTCTCTTAATTTGTAACAGCTCAAGCCCAACGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCCTCAAGGTTTTTACACCGGGCTGTGCGTGGGCTTAGGCTGTTACAAATGGTATCAGAGCTAGATACCGGGCGGTGTGCCAGCGAGGACTCTGGACACCGAAGGGGGAGTGGATTGTGAGATCCCACATCGATTGGAGAGAGGAACGAGTGTCAGTGAGACGCTAGACCTCGAAGGGAGTGGATTGTGAGATCCCACGTCGGTTAGAGAGGGGAATGAAGCACCCTATTGTAAGGGTGTGGAAATCTCCCCTACAGACATGTTTTAAAAACCTTGAGGAGAAGCCCAAAAGGGAAAGTCCAAAGATGACAATATCTACTAGTAGTGGGCTTGGGCCGTTGCATAATTACCTTTCCAATGCACCATTTTGTTACCTGTGTTGTTGAAGTTTCTAGCTTATGATCTGACTGAAGAGTTGTTTTTACTCCATAGCTTGTTGCTGCCTTCTCAAGTGGCCGCGAGAATGAATACTTTTATGCTTCTCTATATGCTGGGCTTTATCACGAAGCAGAGGTTTGGTTAAAAGACTTCCAACTTTTTTTTTTTTACCTTTTTGCTAACTATCCCTGCAACCTATTGTTTATTAGTCTCTGAAAAGTCAATAATACCCTGAATTTTTATATTCTTGTCTTTTTTCCTTGTCCACAACTATACTACTCAGGCCTTTCTTTGATAGCTACAGAACTAGGATCAAGCATTTTGTTTCTATTTTTGATAGCCGGGATGTTGGACCCCCATTTTTGGATTGTGTTTATGGTCTATCTCACTTATCTCACTAGTTTTAAGAGAAACTTTGTGAGATCCCACATCGGTTGGGGAGGGGAACGAAGCATTCCTTATGAGGGTGTGGAAACCTCTATCTAGTAGACGTGTTTTTTAAAATCGTGAGGCTAACGACAATATGTAACGGGCCAAAGCAGATAATATCTACTAGTGGGGGCTTGGGCTATTACAAATGGTATCAGAGTCATACACTGGACGGTATGCAATGAGGACGTTGGGCCCCTAAGGGGGTGGATTGTGAGATCCCATATCGGTTGGAAAGGGGAATGAAGCATGTCTTACAAGGGTGTAGAAACCTCTCCCTAGTAGACGCATTTTAAAACTGTGAGACCGACGACAATACGTTACAAAACGGACAATATCTACTAGCGGTGGACTTGGGCTGGTCATCAAGCATTTTAAGTTATTAAATTGGAACTTATAACTTTAAAAGATATCTCCAAACATGTCTCTACACCAGTAGAAGTTCAACTTTTAAACTGCGGCGGTTGCAATTTCTCATCAAACAAAAGGTCTATTTTTAGAACTAGTTTGATACCCATTTTGCTACATTAAACTCAATCAAGAAAAGCACACTCATCCATGGCTATGAGGAGATGAGATGACACAAACATAAAACGTGATCCCGTGTAATATTTCTGTTAATATGAGTATAACTCAGCAGTAATTAACATATATTCCTTCCTTAGAGGTCGGAGGTTTAAATTCTCACATTCTTGTAGTATTTTTATCGTGCAAGAGCTGGAAATATTTTTTCAGGGATTATATTTTCATTTGTGCAGAAAAAACTGGATGCTGCCAAACAGCATATAGTTGCAGCTTGCCAGTCTCCATATGGACAGAGGTTTGAATCCACCATACATAGTTCCTTTGAAATCCATGCTTTTTTGTGCAACCAATCATTAAGTTCAATTGATTAGCGATGCCTCTCCTCTTTTCAGGTCTGATGATTACATGGCCGCTCTTGCCAAAGTTCACTGTCTCTGTCGAAACTGGAGTTGAAGTTAGTACAATTTTCAGCCAATTGCTTTGATGCCATATTCTACAATTTCTCTCTTTTCCTTCCTGCGTTCACTCTAGCTTTTTAGATCCGAATTCAAATTCGAACGATATCATATGAGGATGCCTGAACCAAATTGGTTCGGATAGTAATCTATCCATTTCAAGTGGGTTGAAAAAAAAAAAAAAAGTGCATTTTGGTCTTTTTTTTTCGTTGAATCCAGCATGAGAGTGGAGAGGATTCAAGCTTCGGATCTCTTAGTCAAAATTATATATTTTAACTAGTTGATTTATATTCGACTCGACTCTAACTTGTTATGAGAGTGAGTAAGATTCAAGTCCTCGATCTCTTCGTCAAGAATATATGTCTTAATTAGTTGACTTATATTCAAGCCGGTTGTTTTTTGGTATGGAAGTGTGAAAGATTCAAGTCTCAAATTTCTTAGCCAAGTATATATGTTTTAGCTAATTGATCTATGCTCGAGTTGACTCTATTTGGTTGTAGGAGTGTGAAAAATTCAAATC

mRNA sequence

TATCTTCATCATCTGAGAAATGGACGGTGCAGAGCCATCGTCTCCAAATTCTCACAAGCACTCCCTTGCTGAGCACAATCTTCTTCAACTTCATCGCGTTCTTCATCAATGGCTGCAATTTCCAATCTCAAACCCTCCATTTCCATGTCCCGTTCGTTTCACATATCTTTCACCGCGCCTTCTTTGCCAAATTCAACTAAACCCCTCGAAAATCTCCACTCTCCGACCTCGTTTCCAATGAAAATCAAGCTCAATCACGTTCCTCCATTATCATTATCTAGAAGATTGTTCGTTCCTTCCGTCTCTGGAATTTGGGACGCCCTAACAGGGGGAAACAACCCTCGCGACGCTGTTACTGCTATTCGACGCGGAATGCTTCTCTTCAGAGAGGGCGATGTTTCAGGATCTTTAGCAGAATTCGATAAGGCAATCGAGTTGGATCCTCGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTTTACTATCTTGATAGATTTGACGAGGGAGCCGAGCAGTTCCGACTAGATGTTGCACAAAATCCGAACGACACAGAGGAATCTATTTGGTGCTTTGTTTGTGAAGCTCAATTGTATGGAGTTGATGAAGCAAGAAGGCGATTTCTTGAGGTAGGTAGAGATCCACGACCAGTCATGAGGGAAGCTTATAATATGTTTAAAGATGGTGGCCATCCTGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGCGAGAATGAATACTTTTATGCTTCTCTATATGCTGGGCTTTATCACGAAGCAGAGAAAAAACTGGATGCTGCCAAACAGCATATAGTTGCAGCTTGCCAGTCTCCATATGGACAGAGGTCTGATGATTACATGGCCGCTCTTGCCAAAGTTCACTGTCTCTGTCGAAACTGGAGTTGAAGTTAGTACAATTTTCAGCCAATTGCTTTGATGCCATATTCTACAATTTCTCTCTTTTCCTTCCTGCGTTCACTCTAGCTTTTTAGATCCGAATTCAAATTCGAACGATATCATATGAGGATGCCTGAACCAAATTGGTTCGGATAGTAATCTATCCATTTCAAGTGGGTTGAAAAAAAAAAAAAAAGTGCATTTTGGTCTTTTTTTTTCGTTGAATCCAGCATGAGAGTGGAGAGGATTCAAGCTTCGGATCTCTTAGTCAAAATTATATATTTTAACTAGTTGATTTATATTCGACTCGACTCTAACTTGTTATGAGAGTGAGTAAGATTCAAGTCCTCGATCTCTTCGTCAAGAATATATGTCTTAATTAGTTGACTTATATTCAAGCCGGTTGTTTTTTGGTATGGAAGTGTGAAAGATTCAAGTCTCAAATTTCTTAGCCAAGTATATATGTTTTAGCTAATTGATCTATGCTCGAGTTGACTCTATTTGGTTGTAGGAGTGTGAAAAATTCAAATC

Coding sequence (CDS)

ATGGCTGCAATTTCCAATCTCAAACCCTCCATTTCCATGTCCCGTTCGTTTCACATATCTTTCACCGCGCCTTCTTTGCCAAATTCAACTAAACCCCTCGAAAATCTCCACTCTCCGACCTCGTTTCCAATGAAAATCAAGCTCAATCACGTTCCTCCATTATCATTATCTAGAAGATTGTTCGTTCCTTCCGTCTCTGGAATTTGGGACGCCCTAACAGGGGGAAACAACCCTCGCGACGCTGTTACTGCTATTCGACGCGGAATGCTTCTCTTCAGAGAGGGCGATGTTTCAGGATCTTTAGCAGAATTCGATAAGGCAATCGAGTTGGATCCTCGTCAAAAGGCATATCTTTGGCAAAGAGGGCTTTCACTTTACTATCTTGATAGATTTGACGAGGGAGCCGAGCAGTTCCGACTAGATGTTGCACAAAATCCGAACGACACAGAGGAATCTATTTGGTGCTTTGTTTGTGAAGCTCAATTGTATGGAGTTGATGAAGCAAGAAGGCGATTTCTTGAGGTAGGTAGAGATCCACGACCAGTCATGAGGGAAGCTTATAATATGTTTAAAGATGGTGGCCATCCTGAGAAACTTGTTGCTGCCTTCTCAAGTGGCCGCGAGAATGAATACTTTTATGCTTCTCTATATGCTGGGCTTTATCACGAAGCAGAGAAAAAACTGGATGCTGCCAAACAGCATATAGTTGCAGCTTGCCAGTCTCCATATGGACAGAGGTCTGATGATTACATGGCCGCTCTTGCCAAAGTTCACTGTCTCTGTCGAAACTGGAGTTGA

Protein sequence

MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRLFVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPRPVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQSPYGQRSDDYMAALAKVHCLCRNWS

Homology

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy Swiss-Prot
Match: Q1C3L9 (Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05
Identity = 22/75 (29.33%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFDEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFVCEAQL 163
           D   S+W ++ E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy Swiss-Prot
Match: Q7CKI5 (Lipoprotein NlpI OS=Yersinia pestis OX=632 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05
Identity = 22/75 (29.33%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFDEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFVCEAQL 163
           D   S+W ++ E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy Swiss-Prot
Match: Q1CM50 (Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=nlpI PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-05
Identity = 22/75 (29.33%), Postives = 37/75 (49.33%), Query Frame = 0


Query: 88  GMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQRGLSLYYLDRFDEGAEQFRLDVAQNPN 147
           G+ L + G+   +   FD  +ELDP        RG++LYY  RF    +  +     +PN
Sbjct: 103 GIYLTQAGNFDAAYEAFDSVLELDPTYNYARLNRGIALYYGGRFPLAQDDLQAFYQDDPN 162

Query: 148 DTEESIWCFVCEAQL 163
           D   S+W ++ E ++
Sbjct: 163 DPFRSLWLYLVEREI 177

[Close]

BLAST of Cp4.1LG11g08960 vs. NCBI nr
Match: XP_023545315.1 (uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 540 bits (1391), Expect = 8.68e-194
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL
Sbjct: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. NCBI nr
Match: XP_022999589.1 (uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima])

HSP 1 Score: 528 bits (1359), Expect = 6.57e-189
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LKPSISMSRSFHISFTAPSLPNSTKPLENLHSP+S PM+IKLNHVPPLSLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPSSLPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNP+DTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPSDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. NCBI nr
Match: XP_022946000.1 (uncharacterized protein LOC111450218 isoform X1 [Cucurbita moschata])

HSP 1 Score: 526 bits (1356), Expect = 1.88e-188
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LKPSISMSRSFHISFTAPSLPNS KPLENLHSP+SFPM+IKLNHVPPLSLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSIKPLENLHSPSSFPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
            VMREAYNMFKDGGHPE LVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 SVMREAYNMFKDGGHPENLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. NCBI nr
Match: KAG7030139.1 (hypothetical protein SDJN02_08486, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 523 bits (1347), Expect = 5.34e-187
Identity = 258/270 (95.56%), Postives = 263/270 (97.41%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LKPSISMSRSFH+SFTAPSLPNS KPLENLHSP+SFPM+IKLNHVPPLSLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHVSFTAPSLPNSIKPLENLHSPSSFPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDR-----FDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEV 180
           RGLSLYYLDR     F+EGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEV
Sbjct: 121 RGLSLYYLDRNSIFRFEEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEV 180

Query: 181 GRDPRPVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHI 240
           GRDPRPVMREAYNMFKDGGHPE LVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHI
Sbjct: 181 GRDPRPVMREAYNMFKDGGHPENLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHI 240

Query: 241 VAACQSPYGQRSDDYMAALAKVHCLCRNWS 265
           VAACQSPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 VAACQSPYGQRSDDYMAALAKVHCLCRNWS 270

[Close]

BLAST of Cp4.1LG11g08960 vs. NCBI nr
Match: XP_038889663.1 (uncharacterized protein LOC120079523 [Benincasa hispida])

HSP 1 Score: 493 bits (1269), Expect = 3.71e-175
Identity = 241/265 (90.94%), Postives = 250/265 (94.34%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LK SIS+S S HI F APS PNSTK LE  HSP+S PM+I LNHVPPLSLSRRL
Sbjct: 1   MAAISSLKSSISISHSLHIPFIAPSFPNSTKTLEISHSPSSLPMRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFLEVGRD R
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDSR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFKDGGHPEKL+AAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLIAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAAL +VHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALTRVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL
Match: A0A6J1KHI1 (uncharacterized protein LOC111493913 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111493913 PE=4 SV=1)

HSP 1 Score: 528 bits (1359), Expect = 3.18e-189
Identity = 258/265 (97.36%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LKPSISMSRSFHISFTAPSLPNSTKPLENLHSP+S PM+IKLNHVPPLSLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPSSLPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNP+DTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPSDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL
Match: A0A6J1G2K4 (uncharacterized protein LOC111450218 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450218 PE=4 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 9.12e-189
Identity = 258/265 (97.36%), Postives = 262/265 (98.87%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MAAIS+LKPSISMSRSFHISFTAPSLPNS KPLENLHSP+SFPM+IKLNHVPPLSLSRRL
Sbjct: 1   MAAISSLKPSISMSRSFHISFTAPSLPNSIKPLENLHSPSSFPMRIKLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
            VMREAYNMFKDGGHPE LVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ
Sbjct: 181 SVMREAYNMFKDGGHPENLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           SPYGQRSDDYMAALAKVHCLCRNWS
Sbjct: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL
Match: A0A0A0LGH0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032740 PE=4 SV=1)

HSP 1 Score: 484 bits (1245), Expect = 8.17e-172
Identity = 238/265 (89.81%), Postives = 247/265 (93.21%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MA  S+LK SIS+S S H SFTAPS  NSTK +E  HSP+S PM+I LNHVPPLSLSRRL
Sbjct: 1   MATSSSLKSSISVSHSLHKSFTAPSFTNSTKTIEVFHSPSSLPMRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKK+DAAKQ IVAACQ
Sbjct: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQDIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           S Y QRSDDYMAALAKVHCLCRNWS
Sbjct: 241 STYAQRSDDYMAALAKVHCLCRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL
Match: A0A5D3BC02 (TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001400 PE=4 SV=1)

HSP 1 Score: 483 bits (1243), Expect = 1.71e-171
Identity = 238/265 (89.81%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MA  S LK SIS+S S H SFTAPS  NS+K +EN HSPTS P++I LNHVPPLSLSRRL
Sbjct: 1   MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDV GSLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLGSLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFK+GGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKK+DAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKNGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKVDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           S YGQRSDDYMAALAKVHCL RNWS
Sbjct: 241 STYGQRSDDYMAALAKVHCLRRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL
Match: A0A5A7TX07 (TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001100 PE=4 SV=1)

HSP 1 Score: 477 bits (1228), Expect = 3.30e-169
Identity = 236/265 (89.06%), Postives = 246/265 (92.83%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           MA  S LK SIS+S S H SFTAPS  NS+K +EN HSPTS P++I LNHVPPLSLSRRL
Sbjct: 1   MATNSILKSSISISHSLHNSFTAPSFANSSKTIENFHSPTSLPIRITLNHVPPLSLSRRL 60

Query: 61  FVPSVSGIWDALTGGNNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYLWQ 120
           FVPSVSGIWDALTGGNNPRDAV AIRRGMLLFR+GDV  SLAEFDKAIELDPRQKAYLWQ
Sbjct: 61  FVPSVSGIWDALTGGNNPRDAVAAIRRGMLLFRQGDVLESLAEFDKAIELDPRQKAYLWQ 120

Query: 121 RGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRDPR 180
           RGLSLYYLDRF+EGAEQFRLDVAQNPNDTEESIWCF+CEAQLYGVDEARRRFLEVGRDPR
Sbjct: 121 RGLSLYYLDRFEEGAEQFRLDVAQNPNDTEESIWCFLCEAQLYGVDEARRRFLEVGRDPR 180

Query: 181 PVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAACQ 240
           PVMREAYNMFK+GGHPEKLVAAFSSGR NEYFYASLYAGLYHEAEKK+DAAKQHIVAACQ
Sbjct: 181 PVMREAYNMFKNGGHPEKLVAAFSSGRVNEYFYASLYAGLYHEAEKKVDAAKQHIVAACQ 240

Query: 241 SPYGQRSDDYMAALAKVHCLCRNWS 265
           S YGQRSDDYMAALAKVHCL RNWS
Sbjct: 241 STYGQRSDDYMAALAKVHCLRRNWS 265

[Close]

BLAST of Cp4.1LG11g08960 vs. TAIR 10
Match: AT3G05625.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 362.5 bits (929), Expect = 3.0e-100
Identity = 181/267 (67.79%), Postives = 212/267 (79.40%), Query Frame = 0


Query: 1   MAAISNLKPSISMSRSFHISFTAPSLPNSTKPLENLHSPTSFPMKIKLNHVPPLSLSRRL 60
           M+    + P I  SR+    FTA S   +  P  + H              PP +LSRRL
Sbjct: 1   MSLTQIVNPIIYPSRTIPRRFTAISPFKTLSPQFSRH--------------PPHALSRRL 60

Query: 61  FVPSVSGIWDALTGG--NNPRDAVTAIRRGMLLFREGDVSGSLAEFDKAIELDPRQKAYL 120
           F+PSVS IWDA+TGG  +NPR+A+ A+RRGM LFR+GDV+GS+AEFD+AI LDPRQKAYL
Sbjct: 61  FLPSVSSIWDAITGGGDSNPREAIAAVRRGMQLFRQGDVAGSVAEFDRAIILDPRQKAYL 120

Query: 121 WQRGLSLYYLDRFDEGAEQFRLDVAQNPNDTEESIWCFVCEAQLYGVDEARRRFLEVGRD 180
           WQRGLSLYY+DRF+EGAEQFR+DVAQNPNDTEESIWCF+CEA+L+GVD AR +FLEVGRD
Sbjct: 121 WQRGLSLYYVDRFEEGAEQFRIDVAQNPNDTEESIWCFICEARLHGVDVARTQFLEVGRD 180

Query: 181 PRPVMREAYNMFKDGGHPEKLVAAFSSGRENEYFYASLYAGLYHEAEKKLDAAKQHIVAA 240
            RPVMREAYN+FK+GG PEKLV  FSSG+ +EYFYASLYAGLY+EAE K + AK H+ AA
Sbjct: 181 SRPVMREAYNLFKNGGDPEKLVNDFSSGQASEYFYASLYAGLYYEAEGKSENAKFHLTAA 240

Query: 241 CQSPYGQRSDDYMAALAKVHCLCRNWS 266
           C SPYGQRSDDYMA+LAKVHCLCRNWS
Sbjct: 241 CGSPYGQRSDDYMASLAKVHCLCRNWS 253

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1C3L9	4.6e-05	29.33	Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=nl...	[more]
Q7CKI5	4.6e-05	29.33	Lipoprotein NlpI OS=Yersinia pestis OX=632 GN=nlpI PE=3 SV=1	[more]
Q1CM50	4.6e-05	29.33	Lipoprotein NlpI OS=Yersinia pestis bv. Antiqua (strain Nepal516) OX=377628 GN=n...	[more]

BLAST of Cp4.1LG11g08960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545315.1	8.68e-194	100.00	uncharacterized protein LOC111804759 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999589.1	6.57e-189	97.36	uncharacterized protein LOC111493913 isoform X3 [Cucurbita maxima]	[more]
XP_022946000.1	1.88e-188	97.36	uncharacterized protein LOC111450218 isoform X1 [Cucurbita moschata]	[more]
KAG7030139.1	5.34e-187	95.56	hypothetical protein SDJN02_08486, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038889663.1	3.71e-175	90.94	uncharacterized protein LOC120079523 [Benincasa hispida]	[more]

BLAST of Cp4.1LG11g08960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHI1	3.18e-189	97.36	uncharacterized protein LOC111493913 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1G2K4	9.12e-189	97.36	uncharacterized protein LOC111450218 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0LGH0	8.17e-172	89.81	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G032740 ...	[more]
A0A5D3BC02	1.71e-171	89.81	TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7TX07	3.30e-169	89.06	TPR_REGION domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of Cp4.1LG11g08960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05625.1	3.0e-100	67.79	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 75..258 e-value: 2.7E-22 score: 81.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 77..233
None	No IPR available	PANTHER	PTHR47908	FAMILY NOT NAMED	coord: 1..265
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 81..114 score: 9.9419

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08960.1	Cp4.1LG11g08960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity