Cp4.1LG11g08780 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08780
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Pectinesterase
Location	Cp4.1LG11: 7067094 .. 7078594 (+)
RNA-Seq Expression	Cp4.1LG11g08780
Synteny	Cp4.1LG11g08780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GACAAATTTTGTGTACATCGAGTCCAATAGTAGGGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATGGGTGGATTCCCAATTTCCTTTGAGACACTCTTATATATGAACTCACCATGATTAGGCCTTTCTTGTGTGAACTCACCCAGTCAATAAGTTTAGGGTGGTTTAGTTTCATATTTTCCTTCTACAAGCTGTATACAAATTTTATAGGAAATTTGTTTTGTGATTTGTGTTTCTTTTCTGTTTCCAAGCTCTCTGTTTGGAAATGCTTCGTTATAAAGAAAAAATGAAATTTGAGAACTCTATTCATGTTTCAAACTACACAAACGGTACTTGAGAATTAACTTCAATCTTGTTAAAGATCACGTATTTGTTTAAATTGATGTCAATTAGTATCTTATTAAATCTCCTTATAGTTAGGAGTTGATTTAGTTTTGATTTGAATTAGTTTTTGATTTGTTTACGGGTTTGTTACCAGATTTCCTACCTATTTTAGGTAGATTTTCTAAATATCTTTTTGTATTCTCGGTATATATATATAGAGCATTCTTGCTCTTCATAATATAATATTCTCATCAATTATTCAATCACTCCCTCTTTCACTAACAATTGGTATCAGACCTATCTTTTTAAAGGATTTGAAAGATCAAAATTGGCGGAGAATCCAAATTTTCAGCTGTTGCACCACCAGTCTTCGATGGAGACAATTATCAAATGTGGGCAGTTCTTATGAAGACTTATTTGGATGCTTTGGATGCTTTGGATCTTTGGGAAGCAATAGAAGAGGATTACGAGGTCCCTCTGCTTTCAGCAAATAGAAGAGGATTACGAGGTCCCTCTGCTTTCAGCAAATCCTACTATAGCACAAATAAAAGTACAGAAGGAAAAGAAGACAAGGAAATCAAAGGCAAAAGCTTGCCTATTTGCCGTTGTATCTCAAATGATCTTCATGCAAATAATGTCCCTCAAAACAACAAAATCAATCTGGGATTATCTCAAGGCTGAATATGAAGGAGAAGATAGGATTCGTGGAATGAAAGTCCTGAATTTGATTAGGGATTTCGAGTTGCAGAAGATGAAGGAGTCAGAGTCGGTGAAAGAGTACTCTGACAGACTTCTCAGCATCGCCAACAAGGTGAGATTGCTTGGTTCTGTGTTAAATGATTCCAGGATCGTTGAAAAGTTGTTGGTCACTGTTCCAAAGAAGTTTGAAGCCACCATTACTACTCTCGAGAACACCAAAGACTTGTCAAAGATTTCTCGTACACAGCTCTTGAATGCTTTACAAGCATAAGAGCAAAGGAGGTCTACGAGGCAAGAAGGGGTGATTGAAGGTGCCTTACATGTCAAGCATCAAGACAATAGCAGGTATAAAAATAAGAAAATTTTCAAAAATCAATCGACGAATGGAGATTCTTCTGCCAATTATCAGAAGACAAAAAGAGGAGGTTTCAAAAAATCCTATGCACCCTGCCGCCATTGTGAGAAGAAAGGTCATCCACCATACAAGTGTTGGAGAATACCTAATGCCAAATGCTCCAAATGCAATCTACTTGGACATGAAGCTGTGATCTGCAAAGTCAAAGGATAGGTGAAAGAAGTAGATGCACAGATAATTGATCAAGAAGAAGAAGAAGATCAATTATTTGTGGTCACTTGTTCCTCAGGCAAAGAATCAAGCGAGAGCTGGTTGATTGACAGTGGGTGCACAAATCATATGACATATGACAAGGAGTTTTTTGAGGAACTAAGGGACACTGAAGTCAAGAGAGTGAGGATTGGCGATGGTGAACACTTGGAAGTCAAAGGAAAAGGCACAGGAGTTATAACAAGTTATGAGGGTACAAAATTTATTTCAGATATTTTATTTGTACCTAAACTTGATCAAAATCTCTTAAGTGTTGGTCAGTTACTTGATAAAGGCTATAAAGTGTTGTTTGAGACCAAACAGTGCTTGATCAGAGATGCTAGTGGCAAAGACTTGTTCACTGTCAAAATGAAAGGAAAAGGCTTTGCTCTAAATCCGACGACCTTTATAGCCAGAGCTAGTGCCATTGAGATTTGGCACAAAAGACTTAGACACTTTCATCATCGAGGTTTGCTTCAGATGCAGTCAAAGAAGCTGGTAGAAGAACTCGCTAACATTGATGATGACATGCCTTCTAACCATGCTTGTAATTTTGGGAAGCAACATAGGCAACCCTTTCCTAAACAAGCATGGAGACCCTCGAAAAAACTAAAGCTCGTTCATACTGATCTTTGTAGTCCTTAGCGAACACCATCATTAAATGGTAATCTTTATTACACTGTTTTTTTATTGATGATCTAACAAGAATGGGTTGGATCTTCTTGCTGAAGCAAAAGTCAGAAGTTGCGGGTGTGTTTTGGAATTCAAAGCTAGAGTTGAGAATGAAAGTTCATGCTTGATTCAAACTATAAGATTAGATAATGGCAAGGAGTACACTTCGGAAACTTTTAACAGGTTTTTGAAGAGGCTGCAAATTGAACATAAATTTAAAGCACCATAAACTCCTCAACAGAATGACGTCAGTGAAAAGAGGAATAGATTCATAATGGAGATGACGAGTATTAAATAAAAGCTATGGTCCTTAAATTTAGTTAAGTTGTTTTGACCTTTTAAATTTCTGAATTCACGCTAATGGAAGAGGGTAAATTTGGTCGGCCATTTTTAGCTAACTTTGGGCGAAGTTTTCGCCCACTCTTTCTATTTTTGTAATTAGGTTTGTTATTTAAAGAATTCAACTGAATGAGAAATAAACATCGGGTCTTCAGCAAATTCTCTCCCTCTCTCATTTTACTTTCCGCTATTATTTCTTCGAAGAAACTTTCTTCGGCCGTTTGTTTTTCGTCGACGTTTTGCCTCTATTATTTCTTCGAAGAAACTTTCTTCGGCCGTTTGTTTTTCGTCGACGTTTTGCCAAGAGTCAACAAGTGGTATCAGAGAACGGCTGAAGCCATCAATGGTATATCATTTCGGATGAGCCAACTTAATCAACAGTCAAGTTGAATAGCTCAAGTGGTTAGAGCGACGACCTAACAACACACAGGTCTCAGGTTCCGAGTAGAAGAAAATGCAAAGTGCGAAAAAACACACATCGTGGGGTCCATCCCGGGCAGGCTCACTCATTTCTCCACGTCGCCATCGTGTGCCGGCATCTCCATCACCGCCACAAAGAGGTCGACGCCCGTCATCACGGGCGTCGAGTTGTCGTTGAGCGAGTGATCAGGGAGACGACGACCGCCACCGTTCAGTACCCGATGTTGACAAGGTCTAACTACAACGAGTGGGCCTTGTTGATGCGCTTCAATCTACAGGCGCAAGGGTAATGGCACGCTGTCGAGCCAAAGGAAGGAGAAACGATCGAGTACCGGGAAGATCAGCTGGCGTTCGCCGCCATATTACGGTCTGTGGCCCCAGAGATGCTGGTATATCTCTCCACCAAGCGCACCGTGCAATCGGCCTGGGAGGGAATCAAATCGCGTAGGTTGGTGTGCAGCGAGTGCGGGAATCCAACATCGAGCAGCTGCAGAAGAAGCTCTCGTAGATCCACTTTAAGGACGGCAAATCCGTCGATGATTTTTCAATGCGGATCACGGGGCTCGCCAACAGCATCACCACTCTCGGTGGGAGCATCAGCAAGACCGAAATCGTGAAGAAGATGCTGCAGGTCGTCCCCGATCACCACGAGCAAGTTACGATTTCGATCGAGATATTGCTTGACGTGAACGACCTAACAGTGGAAGAGGTGACCGGAAGACTGAGTAACGTCGAGCAGCGGAAGAAAAATACCGCTTCAGCTGTCGACAAGGAGGGTCGTCTACTCCTCACTGAGGAAGAATGGCTTGCACGCCTAAAGCTTCGTGATAACACTGGCGAGAGCAACGGGCCCTCCAGCCGCAAAGGTGGTAAGAAGCCATGGAAAGCTCACGGGCGCACGTGCGGGAAAGCTAGGGATCAAAAGAAGGAGTCTCGACCGATGGCAGGCCGATCCAGTGCTCGAACTGCGGGAAGAGAAGTCACCTGAGGAGGACGAGCCAGCTTTCTTCATGGCAAGTGCATACGTCCCCAATTTCGATTCCAAATCCACGGAGCTGGAGGTAATCGACGACGACGTCGAACCCAAGGAAGAGCTCCAGCTGGGCGTAGCCAAGAAGGCACCAGCTGGGAAGCCAATTCAACTGAAGGAGGAGCGAGTGTTCGCTCAGATCGGCGAGAGGGACGAGCAACATGAGCATCGACGATGGATCCTCGACACAGGGGCAACAAACCATATGACTGGGACTAGATCTGCGTTCTTCGAGCTCGACTCGGGGATTCGTGGGACGGTGAAATTCGGCGACGGCTTCGCTGTCGAGATCAACGGGTGCGGCAGCATCCTGTTCGTCAATAAGGGAGGCGAGCACCGCAAGCTGGCCGATGTCTACTTCATCCTGAGGCTCAAGGCTAACCTTGTGAGTCTGGGTCAACTCGATGAGGCAGACTGCTTCATTTCCATCGAGCGCGGGCTACTCAAAATCTGCGATGATCGACGACGGCTACTCACGTAGATTCGGCGCACGAAAAACCATCTTTACATCATAGAGTTAGAGATAGAGCAACCCGTCAGCCTCTCGGCCAAGATCGAAGAGGTATCTTGGAGGTGGCACGCAAGGTACGGGCACTTAAAGTTTCCTACTCTAGAAAAGCTACAGAAGGATGAGATGGTGCACGGTTTGCCGGCAATCAAAGGCGTGAACAAGCTGTGCGACGGGTGCCTCATCGGCAAACAGAGGCACACACCATTTTCTCGGACATCCTACCGCGCCGATGAGCCGTTAGAGCTTGTACATGGCGATATTTGCGGGCCCATCAAGCCGGCGACCCCAGGCGATAAGAGTCTCTTCCTCCTGTTAGTCGATGACAAAAGCCGCTTCATGTGGCTGACCCTGCTGCAAGCAAAAAGTGAGGCGGCAGAGGCGGTTAAGCGCATTAAAGCTCGAGCGGAGGCCGCATGTGAGAAGAAGATGCGAGTGCTACGCACAGACCGAGGCGGAGAATTCACCTTGACAAGTTTCAATAAGTACTGCGACGAGTTCGGCATACAACGACACCTAACAGCGCCCTACTCCCCCCAACAGAACGGAGTGGTGAAGCGCCAAAATCAGACCATCGTCGGGACAGCGAGGTCATTGCTGGTGACGATCGGGATGCCTGGAAGATTCTGGGGAGAGGCGGTAATGATGACCGTCTATCTCCTCAATTGGTCACCAACCCGAAGCCTCAACAGGAAGACGCCATATGAGGCCTGGTACAACAAAAAGCCAGCGGTACATCATTTCTGCATGTTCAACTGCGTCCCCACCTCGCCAAGCTCGATCCCAGGGGGCTGAAGGCCGTCTTCATTGGCTATGAACCTGGGAGCAAGGTGTACAAACTCTATGATCTTGTAGGATTCGAGCTCACGTGTCTCGCGACGTCATCTTCGACGAAAGCACCTTCTGGCAATGGAACGATGTGATCGAGGCAGACCACAACCCAAATCAATTCACGGTGGAGTACCTCGTCACTGAGCCAGAAGAAGGAGAAGCCCAGCATCAGGAACCGTCACCGCCGCTAGCAGGTGCACCATGTTAGGATCGCACAACAACGCACACGCTCGATCTAGATGAACACAAAGAATGAGATAGTGAAAATTGCAAGAACTCTCGCTAAAAGGGTTTTTTTTTATTATTATTGATGACTTCAGGTATGTACAACAAGAGAGTACAGAGAATAGAAAGTACATTTTCAAAGCTCTACCGGACGAGATATATATATTGTTTAGTTTACTATATATAGTTTTACTAGATTTAGCCATCTACTATATATAGTTATTTACCATATATAGCTTTACCGGATATAGGTTTACCATATATAGCTTTACTATATATAGCTTTACCAAATATAGCTTTATCGGATATAACCGTTGACCANGGGAGCAGACTCCATAACTCAACAATTCTCCCACTTGGAGACTGATCCTACACCATACCAATTTCGGCTTTGCATAACATTAATTTTCCAACATCAACACATTTTGTCAACATGTCTGCTAGATTCTTTGCGCCCTCTATCTTCTCCAAACACATATCGCCTTCTTCCACTAACCTGCGAGTGAAGTGGTATCGTCTTCTAATGTGTTTTGTCCTTGAATGATAGACTGGGTTTTTCACCAACTGTATGGCACTCTGACTATCTGTATAAAGGATCTTCTTGCACTGCTTCCGGCCTAATTCTTCTAGATAGTCTGTCCATTCATATCATCTCATTTCAGCTTCAGCTATTGCCACGTACTTTGCTTCAGTAGATGAAAGAGCAACGCATTTCTGAAGCTTGGACATCCAACTCACTGCTGTTCCATCTATAGTGTAGATATATCCAGATGTGCTCTTGCTAACCATAACAAAGTGTAGTATTGGATGTACCTCTCAGATATCTTAGAAGCCATGTCATAGCTTCCCAATGTTCTTTCCCTGGATTTGCCATGTACTTGCTAACAACTCCCACTGCATGTGTTATGTCAGGTCTAGTGCAGACCATAGCATACATCAAACTCCCAACTGCAGAAGCGTACGGAACTGATGCCATGTGCTCACGTTCCTCAACTGTCTTGGGAGATTGCCCCTTTGACAATTTAATATGATTTGCCAAGGGGGTAGTCCTGGGTTTAGCGTTATTCATCTTGAATTTGGACAACACCTTCTCAATGTACTGCTCTTGGGATAGATTTAATGTGCCAGCAGATCTATCTCGAGAAATCCTCATCCCAAGGATCTGCTTCGCTGCACCTAAATCTTTCATCTCAAATACTGAAGACAAGCTTGCCTTCAGGTGGTTTATCTCCCTCATACTTGATCCAGCAATTAGTATATCATCCACATACAGGAGTAGAAACACATAAGAATCAGTGTATTTCTTGAGGTAGCAACACTGATCCTTTTCACTTCTGTGGAAACCACTCTTGCTCATGAAGGAGTCAAACTTCTTGTACCATTGTCTCGGTGCTTGTTTCAGTCCATACAAGCTCTTATTGAGCTTACACACCATGTGCTCCTTGCTTGGAGCTGCAAATCCTTCGGGTTGTTGCATATAGATCTCCTCGTCTAGATCTCCATGTAAAAATGCCGTTTTTACATCCATTTGCTCAAGGTGCAAATTCTCCGATGCAACAATACTCAGTAGAATTCGGATAGTAGTTAATTTCACAACTGGAGAAAAGATCTCAGCATAATCAATGCCTTTTCTTTGTGAATATCCTTTAACTAGTAACCGAGCCTTAAACCTCCTTCTGTCATCTGGTTCAACCTTGATTTTGAACACCCATTTGTTCAACAGAGCTCTCTTTTCTGTAGGCAACTCAATCAGCACCCACGTATTATTCCAATCAGCACCCACGTATTATTCCTTTCAAGTGAGCTCATCTCATCATCCATGGCTTGCTCCCACTTGGTTGAATCTTCCACTTGTAGGGCCTCATCAAAGGACTCTGGTTCTCCTTCGTCAGTCAGCAATAGATAATGTAATGAGGTTAAATATCTATCATGTGCTTTGATAGTTCTGGATGATTTCCTCAACACCTGCTCAGGTGCAACTTACTCCACGTCTGGTTCTTCAGCAATAGGATCAGAAGTTTCTTGAGCTTCTGTTGTACCATCACTGCGTGAGTTTTCTTGCCACTCAAGTTCAACTCCCACTTGCTTCGTAGTCTCAGAGTTTATCTTCTCTCTGTCCTTGTACATGACATTTTCATCAAAGGTCACATCACAGTGTCTTAGAATTTTCATATTTTTCTCATCCCAAAACCTGTACCCGAACATGTCAAAGCCATAGCCTATGAAGTAGCATTTAACAGCCTTATCATCAAGTTTATCTCTCTTCTCTGGATCAACATGAACATACGCAGTACAACCAAAGGTTCTCAAGTGAGAGTACTTGAGTTCTTTTCCTATCCATACTTCTTCGGGCAATTTGAACTTCAAGGGTACTGACGGCCCTCTATTAATCAAATATGTTGCTGTGTTCACAGCATCAGCCCAGAATGTCTTTGGCAGTCCAGAATGAATCCTCATGCTTCTTGCTCGCTCATTCAATGTTCTGTTCTTCCTTTCTGCAACACAAAATGTTATAAACTCTGATTTGTTGTACTCTCTTCCATTGTCAGACCTCAGGCATTTGATTTTCAAGTCGGTCTGATTTTCAACTTTAGCTTTCCACTTCTTGAAGGTGGTAAACACATCTGACTTGTGATGAATATAATAAGGATGTGTTAAATAAGCATCCGAAGTTTTGAAGTTGGATAATAACACCAAGATAGGTGCTCTGGATCACTTGAGAGGTTGTGAAAGAAAATACGAACATCTTGAATATGCCACCTTTGAGCTTGGTGAGAAATTTGAAGATGCTTATAACGTATTCTTGATATTGGATGATCGAGAATAGTTTGCCAACCACAGTTCTCGGTCTAGTAGAATGATTGAGATTCGGAAGCAATGGCAATGGTTTGGAAGCTGTTGAAAGCAGGAAATTGTGGTTGTTGTGATACTTGATTGGACTTATCACGATGAAACTTCTCACAATGGATGAACCGCGGCGGTAAAGGCTTTACTGATTTTGTTAGGGTTTGGCTCTAATACCAAACCCTAATTCAAGAAGAAATTTTGATATTTAAGAATATCAAAATCGGTGCTATGATACCATGTTAAGAATGAGAAATAGAATTGGGATCGAAAGTGTGTATTCTCATTGATATTCATAACGTTTAAATAGGATACAAGCTACCGACTAATACCTACAAATAATGAAAATATAAATTAATTAAATATTGAGAATAAAATAAAATATACTACTAATGAAGTAAAGAATATTAATCAATTATTATAATATATTCTCCAAATATTAAATATCAACAAATAGGTCTGCCTCCTTGCGCGGGAGGCATTATTTTTATTATTTTTGTTATTTTTATTATTATTATTATTATTATTATTTTGCCACTCAATTCTCTTATTATTATTTATTTATTTATTTTGCTATATTTGCCACTAAATTCTTTTAGTTAATATATACTAATTAATTTTATAAATATAAATTTATTATATTCAAATTAACAATATTTTTTATTTTTTAAATTAGTTGATTTTGTCTTAAATTTTAGTTATGCTTAATTTATTTCTTATATTAGAAAACAAAATCTAACTTCTTGGTGTGTGTCATTAGAGGGGTAAACAAATTGGGTTGAAAAAATCGTTTGGACCAATTCAATTTCGGGTTGGTTGAAGTGGTGACCCGAGAAACTTGAATAAAGTTTCCAACCTAGCTCAAACCTTTATTTTCTAATTGAATTCGATTATTTTTTAAAAAAATCAACTCATCCATAATACAAATTTCATTAATAACTAAAGTTTAAATATCCAACATTTACAAGTCACAGTATAGTACTAACATCGATTACAAACGTCAAATATTATTAATCTTCGTAAAAATAGGAAAAGGTTGGATCGGGTTGTAACCATGTTTTCGAGTTGGTAGGGTTGACCCGTCCAAAAAATGTCAACCACAAACTGATTGTGAGTTTTGTTTTTCCAAAAATTTAATCCAGTCCAACAGGAAAAAAAAAAAAAAAAACTAACATAATCTAACCTTAATTCAGCTTTTATGGTTTTAGTTGGGAGTCGAGTTCTTTAAACTCTATTAAAGTTGGAATTCTTTTTGTTTCATTGCATATTCAAAGTGCCCATTTGACGGCAGAAGAGAGGGAGAAGGGAGATTTGATAAGGTACGCCAATTCATAATATTATTATTATTTTCCTTGTCATTTCATGGTTTTAATTTAAATAATTAGACTAAATTAATCACTTTTTAAAACTAATCATAAAGCTTAAAGATATTATTGAGATAATTACCCAGTTTTCGAGTATTTTTATTAATACAGTCAACTTACAGAATTCAGCTTCCTTCTCAACCGAGAAGAATGCAGCTATTATCTCCATTTCTCTTGCTCTTCACCTTGTTTAATGCTGCAATGAACTCTACAAGGGCCCTTGACTTTAAAATTCAATCCGTCATTGTTGTTGACAAGTCTGGTAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTCAAGTCAATCCTGGTGTATACAGGTAATACAACGCATGAATATGCCTAATTCTAGAGAAGTTTTGTTCTAATATGGTCATTTGCAGAGAAAAGGTGACGATCACATCAAAAAAACCATTCATTTATCTACAAGGAGGTGACCGCAATACAACGATTATCACTTTCAATGACCATCAACAAACAGATACTAGCGCTACATTTAGTTCAATTGCAGATAACATTATTGTGAGAGGCATTACCTTTCAGGTATTGTAGCTTCTATAAATTGAACTTAAAGCTCATAGATGCATGAAAAGTATAAGTATAGTACACACCTGAGCAGTTAGAGAAGACTTCGATTGTTCAATCATTAATCATAGTCTATCTTATTTGAATTGTTGCTTGTATGCTTGCGCTGCACGCATAACTCCTTCAACCTGGCAAATGCTCCACAATTGTTTGTTCAAAGTGCTGAAACTTTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCATTATTTCAAAAGTTGTTACATTGAAGGTGCTATAGATTTCATCTTTGGTAATGGTCAATCAGTTTATGAGGTAATCGGTTCGACTTCTTTTTTTTGCAAACTGTCATTGGCGATGTTCTACTAATAACACAATTGGAGAGACTAAAAATGCAGGGCTGCTTGATATATGTTAATGTTGGACTTCTCCCTGAAGTCAACCAAGGGCTGCACAAGGTCGACAATCCCCAAAAGATCTGAGCGGATTTGTATTTAAACAATGCACCATAATGGGGTCGGGCAAAGCCTTTTTGGGAAGAGCATATGGTCCTTTTTCTAGAGTTGTATTCGAAGATACTAACATGGGGAACGTGGTAGCACCAGAGGGATGGAATGCCTGGAACTTCAGGGGCAAAGAGTAAGTTCACAACCCAAAAGATGAAAAAAAAAATTTAGAGTTCCCAATTTTATTGTCAGGTTCTAATTGACGTTACATTATGTAGGAAAAATTTTATGTACATCGAGTTGAATAGTAGAGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAAAGACGCAATCTTCCCCTTCCAAAGGGGTTTCGTGGACAAAGACGCAGGGAGCCTCACAACTAAACAGCTACTCCGTGGAATCCTTCATTAACCAAGATGGGTGGATTCCCAAACTCCTT

mRNA sequence

GACAAATTTTGTGTACATCGAGTCCAATAGTAGGGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATGGAATTCAGCTTCCTTCTCAACCGAGAAGAATGCAGCTATTATCTCCATTTCTCTTGCTCTTCACCTTGTTTAATGCTGCAATGAACTCTACAAGGGCCCTTGACTTTAAAATTCAATCCGTCATTGTTGTTGACAAGTCTGGTAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTCAAGTCAATCCTGGTGTATACAGAGAAAAGGTGACGATCACATCAAAAAAACCATTCATTTATCTACAAGGAGGTGACCGCAATACAACGATTATCACTTTCAATGACCATCAACAAACAGATACTAGCGCTACATTTAGTTCAATTGCAGATAACATTATTGCATTACCTTTCAGTGCTGAAACTTTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCATTATTTCAAAAGTTGTTACATTGAAGGTGCTATAGATTTCATCTTTGGTAATGGTCAATCAGTTTATGAGGTAATCGGTTCGACTTCTTTTTTTTGCAAACTGTCATTGGCGATTCAACCAAGGGCTGCACAAGGTCGACAATCCCCAAAAGATCTGAGCGGATTTGTATTTAAACAATGCACCATAATGGGGTCGGGCAAAGCCTTTTTGGGAAGAGCATATGGTCCTTTTTCTAGAGTTGTATTCGAAGATACTAACATGGGGAACGTGGTAGCACCAGAGGGATGGAATGCCTGGAACTTCAGGGGCAAAGAGAAAAATTTTATGTACATCGAGTTGAATAGTAGAGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAAAGACGCAATCTTCCCCTTCCAAAGGGGTTTCGTGGACAAAGACGCAGGGAGCCTCACAACTAAACAGCTACTCCGTGGAATCCTTCATTAACCAAGATGGGTGGATTCCCAAACTCCTT

Coding sequence (CDS)

ATGACGCAGGGAAGCTCACAACTAAGCGGCTACTCCGTCAAATCCTTCATTAACCAAGATGGAATTCAGCTTCCTTCTCAACCGAGAAGAATGCAGCTATTATCTCCATTTCTCTTGCTCTTCACCTTGTTTAATGCTGCAATGAACTCTACAAGGGCCCTTGACTTTAAAATTCAATCCGTCATTGTTGTTGACAAGTCTGGTAAAGGCAATTTCAAGACCATTCAAGCAGCCATCGACTCAGTTCCACTTAACAACAACAAATGGGTTAAGATTCAAGTCAATCCTGGTGTATACAGAGAAAAGGTGACGATCACATCAAAAAAACCATTCATTTATCTACAAGGAGGTGACCGCAATACAACGATTATCACTTTCAATGACCATCAACAAACAGATACTAGCGCTACATTTAGTTCAATTGCAGATAACATTATTGCATTACCTTTCAGTGCTGAAACTTTCTATACACAAGCATTAGCTGCAAGAATCTACGGTGACAAATCGGCTTTTATCAGCTGTGGATTCAAAGGGTTTCAAGACACATTATGGGATGTAAAAGGCCGCCATTATTTCAAAAGTTGTTACATTGAAGGTGCTATAGATTTCATCTTTGGTAATGGTCAATCAGTTTATGAGGTAATCGGTTCGACTTCTTTTTTTTGCAAACTGTCATTGGCGATTCAACCAAGGGCTGCACAAGGTCGACAATCCCCAAAAGATCTGAGCGGATTTGTATTTAAACAATGCACCATAATGGGGTCGGGCAAAGCCTTTTTGGGAAGAGCATATGGTCCTTTTTCTAGAGTTGTATTCGAAGATACTAACATGGGGAACGTGGTAGCACCAGAGGGATGGAATGCCTGGAACTTCAGGGGCAAAGAGAAAAATTTTATGTACATCGAGTTGAATAGTAGAGGGATAGGATCTTCCCCTTCCAAAAGGGTTCCATGGGCAAAGACGCAATCTTCCCCTTCCAAAGGGGTTTCGTGGACAAAGACGCAGGGAGCCTCACAACTAAACAGCTACTCCGTGGAATCCTTCATTAACCAAGATGGGTGGATTCCCAAACTCCTT

Protein sequence

MTQGSSQLSGYSVKSFINQDGIQLPSQPRRMQLLSPFLLLFTLFNAAMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRAAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL

Homology

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot
Match: O64479 (Putative pectinesterase 10 OS=Arabidopsis thaliana OX=3702 GN=PME10 PE=2 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 4.8e-66
Identity = 137/318 (43.08%), Postives = 188/318 (59.12%), Query Frame = 0


Query: 57  KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQG 116
           +I   I+V+ +    FKT+Q+AIDS+PL N  W++I ++ G+Y EKVTI   K +IY+QG
Sbjct: 36  QIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQG 95

Query: 117 GDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFYT---------QALAARIYGD 176
           G    TII + DHQ T+TSATF+S   NII    + +  Y           A+AA + GD
Sbjct: 96  GGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLGD 155

Query: 177 KSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLA 236
           K A I   F GFQDTL+D  GRHY+K C I G IDFIFG  QS++E  G T    KL + 
Sbjct: 156 KYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFE--GCT---LKLRVG 215

Query: 237 IQPR-------AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNV 296
           I P         AQGR SP D  GFVFK CT+MGSGKA LGRA+  +SRV+F  +   + 
Sbjct: 216 IYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVIFYRSMFSDN 275

Query: 297 VAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQL 356
           + P GW+AW  +G+E +  ++E    G+G+  SKRVPW  T++S    + +T        
Sbjct: 276 ILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPWL-TKASEKDVLQFTNL------ 335

Query: 357 NSYSVESFINQDGWIPKL 359
                 +FI+++GW+ +L
Sbjct: 336 ------TFIDEEGWLSRL 335

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot
Match: Q4PSN0 (Probable pectinesterase 29 OS=Arabidopsis thaliana OX=3702 GN=PME29 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 8.3e-66
Identity = 136/318 (42.77%), Postives = 181/318 (56.92%), Query Frame = 0


Query: 59  QSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGD 118
           Q  + VD+SG GNF TIQ AIDSVP+NN  W  I V  G+YREK+ I  +KPFI L G  
Sbjct: 31  QQQVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAG 90

Query: 119 RNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFY-------------TQALAARIY 178
           +  T + ++DH     S TFS++ADN +    +    Y             T A+AA I 
Sbjct: 91  KRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIG 150

Query: 179 GDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLS 238
           GDKSAF S GF G QDTLWD  GRHYF  C I+GA+DFIFG GQS+Y+    +     L 
Sbjct: 151 GDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQ----SCVIQVLG 210

Query: 239 LAIQPR-----AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNV 298
             ++P       AQGR +P D +GF+F  C + G+G AFLGR +  +SRV+F ++N+ +V
Sbjct: 211 GQLEPGLAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDV 270

Query: 299 VAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQL 358
           V PEGW+AWNF G E   ++ E    G G++  +RV W K  S              S +
Sbjct: 271 VVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWVKKLSE-------------SAI 330

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot
Match: Q3E9D3 (Probable pectinesterase 55 OS=Arabidopsis thaliana OX=3702 GN=PME55 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.1e-65
Identity = 135/311 (43.41%), Postives = 179/311 (57.56%), Query Frame = 0


Query: 62  IVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNT 121
           ++VD+SG GNF TIQ AIDSVP+NN  W  I V  G+YREK+TI  KKPFI + G  + +
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 122 TIITFNDHQQTDTSATFSSIADNIIALPFSAETFY-------------TQALAARIYGDK 181
           T + ++DH     S TF+++ADN +    +    Y               A+AA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 182 SAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAI 241
           SAF S GF G QDTLWD  GRHYF  C I+GA+DFI G+GQS+Y+         +L   +
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGV 208

Query: 242 QPR-AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWN 301
                AQGR +  D +GFVF  C + G GKA+LGRA+ P+SRV+F ++N+ +VV P GW 
Sbjct: 209 TGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWW 268

Query: 302 AWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVES 359
            WN++G EK   Y E    G GS+ S+R  W K  S             AS +   +  S
Sbjct: 269 EWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWVKKLS-------------ASAVQHLADLS 326

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot
Match: Q4PSQ5 (Probable pectinesterase 66 OS=Arabidopsis thaliana OX=3702 GN=PME66 PE=2 SV=2)

HSP 1 Score: 246.1 bits (627), Expect = 5.9e-64
Identity = 130/320 (40.62%), Postives = 184/320 (57.50%), Query Frame = 0


Query: 57  KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQG 116
           +I   I VD +G GNF T+Q+AIDS+   N+ W+++    G+YREKVTI  +K FIYLQG
Sbjct: 30  QIAYTITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQG 89

Query: 117 GDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFY----------TQALAARIYG 176
                T+I ++DHQ TD SATF++ AD+I+    + +  Y            A+AAR+ G
Sbjct: 90  KGIEQTVIEYDDHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLG 149

Query: 177 DKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSL 236
           D+       F G QDTL+D KGRHY+K C I G IDFIFG GQS+++        C L++
Sbjct: 150 DRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKE-------CTLNM 209

Query: 237 AIQPRA---------AQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNM 296
            +   A         A  R SP D  GFVF  CT+ G GK  LGRA+G  +RV+F+ + +
Sbjct: 210 TLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLGRAWGSNARVIFDRSRL 269

Query: 297 GNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGA 356
            +VV P GW+AW  +G E++  ++E    G G+  S+RVPW K  S              
Sbjct: 270 SDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLS-------------L 329

Query: 357 SQLNSYSVESFINQDGWIPK 358
           S+++ ++  SFI+QDGWI +
Sbjct: 330 SEVDGFASVSFIDQDGWISR 329

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot
Match: O04953 (Putative pectinesterase 52 OS=Arabidopsis thaliana OX=3702 GN=PME52 PE=2 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 3.6e-53
Identity = 114/261 (43.68%), Postives = 153/261 (58.62%), Query Frame = 0


Query: 116 GGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFYTQ----------------A 175
           G  +  T IT+N H  TD S+TF+S   +I+    S    Y +                A
Sbjct: 42  GEGQRVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPA 101

Query: 176 LAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYE--VIGS 235
           +A  +YGDKSAF +C F G QDT+WD  GRH+FK+CYIEGAIDFIFG+GQSVYE   I +
Sbjct: 102 VAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINA 161

Query: 236 TSFFCKLSLAIQPRAAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNM 295
           T+      ++     AQGR S  D SGFVF + ++ GS   +LGRAYGPFSRV+F  T++
Sbjct: 162 TAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSRVIFIQTDL 221

Query: 296 GNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGA 355
            +VV PEGW +W++ G E +F Y E+  +G GS  S+RVPW     S      +TK Q  
Sbjct: 222 SSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPWIDKLHS-----FYTKQQ-- 281

Query: 356 SQLNSYSVESFINQDGWIPKL 359
                +S+ +FI+QD WI  +
Sbjct: 282 -----FSISNFIDQDQWISNI 290

[Close]

BLAST of Cp4.1LG11g08780 vs. NCBI nr
Match: KAG6599180.1 (putative pectinesterase 55, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586 bits (1511), Expect = 4.02e-209
Identity = 303/352 (86.08%), Postives = 310/352 (88.07%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNAAMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV 90
           MQLLSPFLLLFTLFNAA+NSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV
Sbjct: 1   MQLLSPFLLLFTLFNAAINSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV 60

Query: 91  KIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIA--L 150
           KIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNII   +
Sbjct: 61  KIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIVRGI 120

Query: 151 PF---------------SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK 210
            F               SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK
Sbjct: 121 TFQNSFNLANAPQLFVQSAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK 180

Query: 211 SCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVF 270
           SCYIEGAIDFIFGNGQSVYE          +++ + P        AQGRQS KD SGFVF
Sbjct: 181 SCYIEGAIDFIFGNGQSVYE-----GCLIYVNVGLLPEVNQGYITAQGRQSAKDPSGFVF 240

Query: 271 KQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRG 330
           KQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRG
Sbjct: 241 KQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRG 300

Query: 331 IGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
           IGSSPSKRVPWAKTQS+PSKGVSW KTQGASQLNSYSVESFINQDGWIPKLL
Sbjct: 301 IGSSPSKRVPWAKTQSAPSKGVSWAKTQGASQLNSYSVESFINQDGWIPKLL 347

[Close]

BLAST of Cp4.1LG11g08780 vs. NCBI nr
Match: KAG6599179.1 (putative pectinesterase 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 483 bits (1244), Expect = 1.10e-168
Identity = 251/352 (71.31%), Postives = 275/352 (78.12%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNAAMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV 90
           MQLLSPFLL FT+FNAAMN TRALD KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV
Sbjct: 1   MQLLSPFLLFFTMFNAAMNFTRALDLKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWV 60

Query: 91  KIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIALPF 150
           KI+VNPG YRE VTI S K FIYLQGG R+TT+ITFN HQQT+TSATF+S+ADNIIA   
Sbjct: 61  KIEVNPGEYREMVTIPSTKSFIYLQGGSRSTTVITFNGHQQTNTSATFNSMADNIIARGI 120

Query: 151 SAE-----------------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK 210
           + E                 TF+TQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK
Sbjct: 121 TFENSFNLANAPQLFDKITGTFFTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK 180

Query: 211 SCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVF 270
           SCYIEGAIDFIFGNGQS+YE          +++ + P        AQGRQS  D SGFVF
Sbjct: 181 SCYIEGAIDFIFGNGQSIYE-----GCLIYVNVGLLPEVNQGYITAQGRQSANDPSGFVF 240

Query: 271 KQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRG 330
           +QCTI GSGK FLGRAYGPFSRV+F+DTNMG VVAPEGW+AW+F+G+E NF+YIE NSRG
Sbjct: 241 QQCTITGSGKGFLGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRG 300

Query: 331 IGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
           IGSSPSKRVPWA TQ             G SQL+ YSV+SFINQDGWIP  L
Sbjct: 301 IGSSPSKRVPWAMTQ-------------GNSQLSGYSVKSFINQDGWIPNFL 334

[Close]

BLAST of Cp4.1LG11g08780 vs. NCBI nr
Match: XP_022946885.1 (putative pectinesterase 10 [Cucurbita moschata])

HSP 1 Score: 466 bits (1198), Expect = 7.09e-162
Identity = 241/340 (70.88%), Postives = 264/340 (77.65%), Query Frame = 0


Query: 43  LFNAAMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREK 102
           +FNAAMN TRALD KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPG YRE 
Sbjct: 1   MFNAAMNFTRALDLKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGEYREM 60

Query: 103 VTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAE--------- 162
           VTI S K FIYLQGG R+TT+ITFN HQQT+TSATF+S+ADNIIA   + E         
Sbjct: 61  VTIPSTKSFIYLQGGSRSTTVITFNGHQQTNTSATFNSMADNIIARGITFENSFNLANAP 120

Query: 163 --------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF 222
                   TF+TQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF
Sbjct: 121 QLFDKITGTFFTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF 180

Query: 223 GNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVFKQCTIMGSGKAF 282
           GNGQS+YE          +++ + P        AQGRQS  D SGFVF+QCTI GSGK F
Sbjct: 181 GNGQSIYE-----GCLIYVNVGLLPEVNQGYITAQGRQSANDPSGFVFQQCTITGSGKGF 240

Query: 283 LGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWA 342
           LGRAYGPFSRV+F+DTNMG VVAPEGW+AW+F+G+E NF+YIE NSRGIGSSPSKRVPWA
Sbjct: 241 LGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGIGSSPSKRVPWA 300

Query: 343 KTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
            TQ             G SQL+ YSV+SFINQDGWIP  L
Sbjct: 301 MTQ-------------GNSQLSGYSVKSFINQDGWIPNFL 322

[Close]

BLAST of Cp4.1LG11g08780 vs. NCBI nr
Match: XP_023546427.1 (probable pectinesterase 29 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454 bits (1169), Expect = 1.52e-157
Identity = 237/335 (70.75%), Postives = 261/335 (77.91%), Query Frame = 0


Query: 48  MNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITS 107
           MN TRALDF IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKI+VNPG YRE VTI S
Sbjct: 1   MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPS 60

Query: 108 KKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIA--LPF--------------- 167
           KK FIYLQGG R+TT+ITF+ HQQT+TSATF+S+ADNIIA  + F               
Sbjct: 61  KKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLANAPQLFVQ 120

Query: 168 SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQS 227
           SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFK CYIEGAIDFIFGNGQS
Sbjct: 121 SAETFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKRCYIEGAIDFIFGNGQS 180

Query: 228 VYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAY 287
           +YE          +++ + P        AQGRQS  D SGFVF+QCTI GSGKAFLGRAY
Sbjct: 181 IYE-----GCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGSGKAFLGRAY 240

Query: 288 GPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSS 347
           GPFSRV+F+DTNMG VVAPEGW+AW+F+G+E NF+YIE NSRG GSSPSKRV WA TQ  
Sbjct: 241 GPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGTGSSPSKRVSWAMTQ-- 300

Query: 348 PSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
                      G+SQL+ YSV+SFINQD WIP  L
Sbjct: 301 -----------GSSQLSGYSVKSFINQDWWIPNFL 317

[Close]

BLAST of Cp4.1LG11g08780 vs. NCBI nr
Match: XP_023546426.1 (putative pectinesterase 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454 bits (1168), Expect = 2.16e-157
Identity = 235/335 (70.15%), Postives = 260/335 (77.61%), Query Frame = 0


Query: 48  MNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITS 107
           MN TRALDF IQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKI+VNPG YRE VTI S
Sbjct: 1   MNFTRALDFNIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIEVNPGEYREMVTIPS 60

Query: 108 KKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAE-------------- 167
            K FIYLQGG R+TT+ITF+ HQQT+TSATF+S+ADNIIA   + E              
Sbjct: 61  TKSFIYLQGGHRSTTVITFDGHQQTNTSATFNSMADNIIARGITFENSFNLADAPQLFDK 120

Query: 168 ---TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQS 227
              TF+TQALAARIYGDKSAFISC FKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQS
Sbjct: 121 ITGTFFTQALAARIYGDKSAFISCRFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQS 180

Query: 228 VYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAY 287
           +YE          +++ + P        AQGRQS  D SGFVF+QCTI GSGKAFLGRAY
Sbjct: 181 IYE-----GCLIYVNVGLLPEVNQGYITAQGRQSENDPSGFVFQQCTITGSGKAFLGRAY 240

Query: 288 GPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSS 347
           GPFSRV+F+DTNMG VVAPEGW+AW+F+G+E NF+YIE NSRGIGSSPSKRVPWA TQ  
Sbjct: 241 GPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGIGSSPSKRVPWAMTQ-- 300

Query: 348 PSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
                      G+SQL+ YSV+SFINQDGWIP  L
Sbjct: 301 -----------GSSQLSGYSVKSFINQDGWIPNFL 317

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL
Match: A0A6J1G5A0 (Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111450826 PE=4 SV=1)

HSP 1 Score: 466 bits (1198), Expect = 3.43e-162
Identity = 241/340 (70.88%), Postives = 264/340 (77.65%), Query Frame = 0


Query: 43  LFNAAMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREK 102
           +FNAAMN TRALD KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPG YRE 
Sbjct: 1   MFNAAMNFTRALDLKIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGEYREM 60

Query: 103 VTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAE--------- 162
           VTI S K FIYLQGG R+TT+ITFN HQQT+TSATF+S+ADNIIA   + E         
Sbjct: 61  VTIPSTKSFIYLQGGSRSTTVITFNGHQQTNTSATFNSMADNIIARGITFENSFNLANAP 120

Query: 163 --------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF 222
                   TF+TQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF
Sbjct: 121 QLFDKITGTFFTQALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIF 180

Query: 223 GNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKDLSGFVFKQCTIMGSGKAF 282
           GNGQS+YE          +++ + P        AQGRQS  D SGFVF+QCTI GSGK F
Sbjct: 181 GNGQSIYE-----GCLIYVNVGLLPEVNQGYITAQGRQSANDPSGFVFQQCTITGSGKGF 240

Query: 283 LGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWA 342
           LGRAYGPFSRV+F+DTNMG VVAPEGW+AW+F+G+E NF+YIE NSRGIGSSPSKRVPWA
Sbjct: 241 LGRAYGPFSRVIFKDTNMGKVVAPEGWDAWHFKGQETNFVYIESNSRGIGSSPSKRVPWA 300

Query: 343 KTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
            TQ             G SQL+ YSV+SFINQDGWIP  L
Sbjct: 301 MTQ-------------GNSQLSGYSVKSFINQDGWIPNFL 322

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL
Match: A0A5A7U1G9 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001480 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 6.86e-145
Identity = 221/357 (61.90%), Postives = 261/357 (73.11%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNA------AMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPL 90
           MQL  PFLLLFTLFNA      A+N  RA D  +QSV+VVDKSG+G+F+T+QAAIDSVP 
Sbjct: 1   MQLQPPFLLLFTLFNAVVFGFEAVNHARAFDLTVQSVVVVDKSGRGDFQTVQAAIDSVPP 60

Query: 91  NNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADN 150
           NNN+W+KIQ+NPGVY+EKVTI  +KPFIYL+G DR+ TIITF+DHQQTDTSATF+S   N
Sbjct: 61  NNNQWIKIQINPGVYKEKVTIPPEKPFIYLEGADRSNTIITFDDHQQTDTSATFTSRPPN 120

Query: 151 IIALPFSAE-----------------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVK 210
           IIA   + E                 T+ TQA+AARIYGDKSAF +CGFKG+QDTLWDV+
Sbjct: 121 IIARGITFENSFNLEEAPELFVCDDGTYITQAIAARIYGDKSAFFNCGFKGYQDTLWDVQ 180

Query: 211 GRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKD 270
           GRH+F++CYIEGAIDFIFG+GQSVY+          +++A  P+       AQGR+S  D
Sbjct: 181 GRHFFQNCYIEGAIDFIFGSGQSVYK-----DCLINVNVASLPQVHQGFITAQGRRSAAD 240

Query: 271 LSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYI 330
            SGFVFK CTI GSGKA LGRAYGPFSRV+F+D  MG VVAPEGW+AWNF+ KEKNFMY+
Sbjct: 241 PSGFVFKGCTITGSGKALLGRAYGPFSRVIFKDAIMGPVVAPEGWDAWNFKSKEKNFMYV 300

Query: 331 ELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKL 358
           E N  G G+S S RVPWAKT               ASQL  +SVESFINQDGWIP+L
Sbjct: 301 EENCTGPGASTSTRVPWAKTLD-------------ASQLRRFSVESFINQDGWIPRL 339

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL
Match: A0A5D3BBR9 (Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G001020 PE=4 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 3.94e-144
Identity = 220/357 (61.62%), Postives = 260/357 (72.83%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNA------AMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPL 90
           MQL  PFLLLFTLFNA      A+N  RA D  +QSV+VVDKSG+G+F+T+QAAIDSVP 
Sbjct: 1   MQLQPPFLLLFTLFNAVVFGFEAVNHARAFDLTVQSVVVVDKSGRGDFQTVQAAIDSVPP 60

Query: 91  NNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADN 150
           NNN+W+KIQ+NPGVY+EKVTI  +KPFIYL+G DR+ TIITF+DHQQTDTSATF+S   N
Sbjct: 61  NNNQWIKIQINPGVYKEKVTIPPEKPFIYLEGADRSNTIITFDDHQQTDTSATFTSRPPN 120

Query: 151 IIALPFSAE-----------------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVK 210
           IIA   + E                 T+ TQA+AARIYGDKSAF +CGFKG+QDTLWDV+
Sbjct: 121 IIARGITFENSFNLEEAPELFVCDDGTYITQAIAARIYGDKSAFFNCGFKGYQDTLWDVQ 180

Query: 211 GRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRA------AQGRQSPKD 270
           GRH+F++CYIEGAIDFIFG+GQSVY+          +++A  P+       AQGR+S  D
Sbjct: 181 GRHFFQNCYIEGAIDFIFGSGQSVYK-----DCLINVNVASLPQVHQGFITAQGRRSAAD 240

Query: 271 LSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYI 330
            SGFVFK C I GSGKA LGRAYGPFSRV+F+D  MG VVAPEGW+AWNF+ KEKNFMY+
Sbjct: 241 PSGFVFKGCAITGSGKALLGRAYGPFSRVIFKDAIMGPVVAPEGWDAWNFKSKEKNFMYV 300

Query: 331 ELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKL 358
           E N  G G+S S RVPWAKT               ASQL  +SVESFINQDGWIP+L
Sbjct: 301 EENCTGPGASTSTRVPWAKTLD-------------ASQLRRFSVESFINQDGWIPRL 339

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL
Match: A0A0A0LH00 (Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_2G034610 PE=4 SV=1)

HSP 1 Score: 409 bits (1052), Expect = 1.00e-139
Identity = 215/358 (60.06%), Postives = 253/358 (70.67%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNA------AMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPL 90
           MQ+  PFLLLFTLFNA      A+N  R     IQSV++VDKSG GNF+T+QAAIDSVP 
Sbjct: 1   MQVQPPFLLLFTLFNAVVFGFEAVNQARDFVLTIQSVVIVDKSGNGNFQTVQAAIDSVPP 60

Query: 91  NNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATFSSIADN 150
           NNN W+KIQ+NPGVY+EKVTI  +KPFIYL+G D + T+ITF+DHQQTDTSATF+S   N
Sbjct: 61  NNNHWIKIQINPGVYKEKVTIPLEKPFIYLEGADSSNTVITFDDHQQTDTSATFTSRPPN 120

Query: 151 IIALPFSAE-----------------TFYTQALAARIYGDKSAFISCGFKGFQDTLWDVK 210
           II    + E                 T+ TQA+AARIYGDKSAF +CGFKG+QDTLWDV+
Sbjct: 121 IIVRGITFENSFNLREAPELFSCDDGTYITQAIAARIYGDKSAFFNCGFKGYQDTLWDVQ 180

Query: 211 GRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAIQPRAAQG------RQSPKD 270
           GRH+F  CYIEGAIDFIFG+GQSVYE          +++A  P+  QG      RQS  D
Sbjct: 181 GRHFFSHCYIEGAIDFIFGSGQSVYE-----DCMINVNVASLPQVYQGYITAQSRQSAAD 240

Query: 271 LSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWNAWNFRGKEKNFMYI 330
            SGFVFK+CTI GSGKA LGRAYGPFSRV+F+D  MG+VVAPEGW AW+F+GKE+NFMY+
Sbjct: 241 PSGFVFKECTIKGSGKALLGRAYGPFSRVIFKDAIMGSVVAPEGWYAWHFKGKEENFMYV 300

Query: 331 ELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVESFINQDGWIPKLL 359
           E N  G G+S S RVPWAKT               AS L  +SVESFINQDGWIP +L
Sbjct: 301 EENCTGPGASTSMRVPWAKTLD-------------ASHLTGFSVESFINQDGWIPTVL 340

[Close]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL
Match: A0A1S4DZS3 (Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103499379 PE=4 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.14e-138
Identity = 222/387 (57.36%), Postives = 261/387 (67.44%), Query Frame = 0


Query: 31  MQLLSPFLLLFTLFNA------AMNSTRALDFKIQSVIVVDKSGKGNFKTIQAAIDSVPL 90
           MQL  PFLLLFTLFNA      A+N  RA D  +QSV+VVDKSG+G+F+T+QAAIDSVP 
Sbjct: 1   MQLQPPFLLLFTLFNAVVFGFEAVNHARAFDLTVQSVVVVDKSGRGDFQTVQAAIDSVPP 60

Query: 91  NNNKWVKIQVNPGVY------REKVTITSKKPFIYLQGGDRNTTIITFNDHQQTDTSATF 150
           NNN+W+KIQ+NPGVY      REKVTI  +KPFIYL+G DR+ TIITF+DHQQTDTSATF
Sbjct: 61  NNNQWIKIQINPGVYNWQTFCREKVTIPPEKPFIYLEGADRSNTIITFDDHQQTDTSATF 120

Query: 151 SSIADNIIALPFSAE-----------------------------------------TFYT 210
           +S   NIIA   + E                                         T+ T
Sbjct: 121 TSRPPNIIARGITFEVLWLLKTEFIFIASFEILKPKCTQNSFNLEEAPELFVCDDGTYIT 180

Query: 211 QALAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGS 270
           QA+AARIYGDKSAF +CGFKG+QDTLWDV+GRH+F++CYIEGAIDFIFG+GQSVY+    
Sbjct: 181 QAIAARIYGDKSAFFNCGFKGYQDTLWDVQGRHFFQNCYIEGAIDFIFGSGQSVYK---- 240

Query: 271 TSFFCKLSLAIQPRA------AQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVV 330
                 +++A  P+       AQGR+S  D SGFVFK CTI GSGKA LGRAYGPFSRV+
Sbjct: 241 -DCLINVNVASLPQVHQGFITAQGRRSAADPSGFVFKGCTITGSGKALLGRAYGPFSRVI 300

Query: 331 FEDTNMGNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSW 358
           F+D  MG VVAPEGW+AWNF+ KEKNFMY+E N  G G+S S RVPWAKT          
Sbjct: 301 FKDAIMGPVVAPEGWDAWNFKSKEKNFMYVEENCTGPGASTSMRVPWAKTLD-------- 360

[Close]

BLAST of Cp4.1LG11g08780 vs. TAIR 10
Match: AT2G19150.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 253.1 bits (645), Expect = 3.4e-67
Identity = 137/318 (43.08%), Postives = 188/318 (59.12%), Query Frame = 0


Query: 57  KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQG 116
           +I   I+V+ +    FKT+Q+AIDS+PL N  W++I ++ G+Y EKVTI   K +IY+QG
Sbjct: 36  QIAKTIIVNPNDARYFKTVQSAIDSIPLQNQDWIRILISNGIYSEKVTIPRGKGYIYMQG 95

Query: 117 GDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFYT---------QALAARIYGD 176
           G    TII + DHQ T+TSATF+S   NII    + +  Y           A+AA + GD
Sbjct: 96  GGIEKTIIAYGDHQLTNTSATFTSYPSNIIITGITFKNKYNIASSSSPTKPAVAAMMLGD 155

Query: 177 KSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLA 236
           K A I   F GFQDTL+D  GRHY+K C I G IDFIFG  QS++E  G T    KL + 
Sbjct: 156 KYAIIDSSFDGFQDTLYDDYGRHYYKRCVISGGIDFIFGGAQSIFE--GCT---LKLRVG 215

Query: 237 IQPR-------AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNV 296
           I P         AQGR SP D  GFVFK CT+MGSGKA LGRA+  +SRV+F  +   + 
Sbjct: 216 IYPPNEVYGTITAQGRDSPTDKGGFVFKDCTVMGSGKALLGRAWKSYSRVIFYRSMFSDN 275

Query: 297 VAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQL 356
           + P GW+AW  +G+E +  ++E    G+G+  SKRVPW  T++S    + +T        
Sbjct: 276 ILPIGWDAWKAKGQEGHITFVEFGCTGVGADTSKRVPWL-TKASEKDVLQFTNL------ 335

Query: 357 NSYSVESFINQDGWIPKL 359
                 +FI+++GW+ +L
Sbjct: 336 ------TFIDEEGWLSRL 335

[Close]

BLAST of Cp4.1LG11g08780 vs. TAIR 10
Match: AT3G24130.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 252.3 bits (643), Expect = 5.9e-67
Identity = 136/318 (42.77%), Postives = 181/318 (56.92%), Query Frame = 0


Query: 59  QSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGD 118
           Q  + VD+SG GNF TIQ AIDSVP+NN  W  I V  G+YREK+ I  +KPFI L G  
Sbjct: 31  QQQVFVDQSGHGNFTTIQKAIDSVPINNRHWFFINVKAGLYREKIKIPYEKPFIVLVGAG 90

Query: 119 RNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFY-------------TQALAARIY 178
           +  T + ++DH     S TFS++ADN +    +    Y             T A+AA I 
Sbjct: 91  KRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSYNFPSKGKMNKNPRTPAVAALIG 150

Query: 179 GDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLS 238
           GDKSAF S GF G QDTLWD  GRHYF  C I+GA+DFIFG GQS+Y+    +     L 
Sbjct: 151 GDKSAFYSVGFAGIQDTLWDFDGRHYFHRCTIQGAVDFIFGTGQSIYQ----SCVIQVLG 210

Query: 239 LAIQPR-----AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNV 298
             ++P       AQGR +P D +GF+F  C + G+G AFLGR +  +SRV+F ++N+ +V
Sbjct: 211 GQLEPGLAGYITAQGRTNPYDANGFIFINCLVYGTGMAFLGRPWRGYSRVIFYNSNLTDV 270

Query: 299 VAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQL 358
           V PEGW+AWNF G E   ++ E    G G++  +RV W K  S              S +
Sbjct: 271 VVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWVKKLSE-------------SAI 330

[Close]

BLAST of Cp4.1LG11g08780 vs. TAIR 10
Match: AT5G18990.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 251.9 bits (642), Expect = 7.7e-67
Identity = 135/311 (43.41%), Postives = 179/311 (57.56%), Query Frame = 0


Query: 62  IVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQGGDRNT 121
           ++VD+SG GNF TIQ AIDSVP+NN  W  I V  G+YREK+TI  KKPFI + G  + +
Sbjct: 29  VIVDQSGHGNFTTIQKAIDSVPINNTHWFFINVKAGLYREKITIPQKKPFIVIVGAGKRS 88

Query: 122 TIITFNDHQQTDTSATFSSIADNIIALPFSAETFY-------------TQALAARIYGDK 181
           T + ++DH     S TF+++ADN +    +    Y               A+AA I GDK
Sbjct: 89  TRVEWDDHASLAQSPTFATLADNTVVKKITFANSYNFPSNGKINKNPRVPAVAAFIGGDK 148

Query: 182 SAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSLAI 241
           SAF S GF G QDTLWD  GRHYF  C I+GA+DFI G+GQS+Y+         +L   +
Sbjct: 149 SAFYSVGFAGIQDTLWDSDGRHYFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGV 208

Query: 242 QPR-AAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNMGNVVAPEGWN 301
                AQGR +  D +GFVF  C + G GKA+LGRA+ P+SRV+F ++N+ +VV P GW 
Sbjct: 209 TGYITAQGRTNANDANGFVFINCLVHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWW 268

Query: 302 AWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGASQLNSYSVES 359
            WN++G EK   Y E    G GS+ S+R  W K  S             AS +   +  S
Sbjct: 269 EWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWVKKLS-------------ASAVQHLADLS 326

[Close]

BLAST of Cp4.1LG11g08780 vs. TAIR 10
Match: AT2G47280.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 4.2e-65
Identity = 130/320 (40.62%), Postives = 184/320 (57.50%), Query Frame = 0


Query: 57  KIQSVIVVDKSGKGNFKTIQAAIDSVPLNNNKWVKIQVNPGVYREKVTITSKKPFIYLQG 116
           +I   I VD +G GNF T+Q+AIDS+   N+ W+++    G+YREKVTI  +K FIYLQG
Sbjct: 30  QIAYTITVDLNGGGNFTTVQSAIDSISPPNHNWIRVFTQNGIYREKVTIPKEKGFIYLQG 89

Query: 117 GDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFY----------TQALAARIYG 176
                T+I ++DHQ TD SATF++ AD+I+    + +  Y            A+AAR+ G
Sbjct: 90  KGIEQTVIEYDDHQATDISATFTAFADDIVISGITFKNTYNIVPNNKREIVPAVAARMLG 149

Query: 177 DKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYEVIGSTSFFCKLSL 236
           D+       F G QDTL+D KGRHY+K C I G IDFIFG GQS+++        C L++
Sbjct: 150 DRYVVTDSSFVGLQDTLFDGKGRHYYKRCIISGGIDFIFGYGQSLFKE-------CTLNM 209

Query: 237 AIQPRA---------AQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNM 296
            +   A         A  R SP D  GFVF  CT+ G GK  LGRA+G  +RV+F+ + +
Sbjct: 210 TLGIYAPDNPYGTITAHQRPSPSDEGGFVFSDCTVTGVGKTLLGRAWGSNARVIFDRSRL 269

Query: 297 GNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGA 356
            +VV P GW+AW  +G E++  ++E    G G+  S+RVPW K  S              
Sbjct: 270 SDVVLPIGWDAWRAKGNERDLTFVEAGCTGAGADTSQRVPWLKKLS-------------L 329

Query: 357 SQLNSYSVESFINQDGWIPK 358
           S+++ ++  SFI+QDGWI +
Sbjct: 330 SEVDGFASVSFIDQDGWISR 329

[Close]

BLAST of Cp4.1LG11g08780 vs. TAIR 10
Match: AT5G26810.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.6e-54
Identity = 114/261 (43.68%), Postives = 153/261 (58.62%), Query Frame = 0


Query: 116 GGDRNTTIITFNDHQQTDTSATFSSIADNIIALPFSAETFYTQ----------------A 175
           G  +  T IT+N H  TD S+TF+S   +I+    S    Y +                A
Sbjct: 42  GEGQRVTTITYNGHAATDVSSTFTSYPSHIVVRNLSIMNTYNRLTSLTKANGMSWDIKPA 101

Query: 176 LAARIYGDKSAFISCGFKGFQDTLWDVKGRHYFKSCYIEGAIDFIFGNGQSVYE--VIGS 235
           +A  +YGDKSAF +C F G QDT+WD  GRH+FK+CYIEGAIDFIFG+GQSVYE   I +
Sbjct: 102 VAISVYGDKSAFYNCDFLGLQDTVWDNLGRHHFKNCYIEGAIDFIFGSGQSVYEDCHINA 161

Query: 236 TSFFCKLSLAIQPRAAQGRQSPKDLSGFVFKQCTIMGSGKAFLGRAYGPFSRVVFEDTNM 295
           T+      ++     AQGR S  D SGFVF + ++ GS   +LGRAYGPFSRV+F  T++
Sbjct: 162 TAGALASKVSFGYITAQGRSSDSDPSGFVFLRGSVSGSTSVYLGRAYGPFSRVIFIQTDL 221

Query: 296 GNVVAPEGWNAWNFRGKEKNFMYIELNSRGIGSSPSKRVPWAKTQSSPSKGVSWTKTQGA 355
            +VV PEGW +W++ G E +F Y E+  +G GS  S+RVPW     S      +TK Q  
Sbjct: 222 SSVVHPEGWYSWHYGGYEMSFTYAEVECKGAGSDMSRRVPWIDKLHS-----FYTKQQ-- 281

Query: 356 SQLNSYSVESFINQDGWIPKL 359
                +S+ +FI+QD WI  +
Sbjct: 282 -----FSISNFIDQDQWISNI 290

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64479	4.8e-66	43.08	Putative pectinesterase 10 OS=Arabidopsis thaliana OX=3702 GN=PME10 PE=2 SV=1	[more]
Q4PSN0	8.3e-66	42.77	Probable pectinesterase 29 OS=Arabidopsis thaliana OX=3702 GN=PME29 PE=2 SV=1	[more]
Q3E9D3	1.1e-65	43.41	Probable pectinesterase 55 OS=Arabidopsis thaliana OX=3702 GN=PME55 PE=2 SV=1	[more]
Q4PSQ5	5.9e-64	40.63	Probable pectinesterase 66 OS=Arabidopsis thaliana OX=3702 GN=PME66 PE=2 SV=2	[more]
O04953	3.6e-53	43.68	Putative pectinesterase 52 OS=Arabidopsis thaliana OX=3702 GN=PME52 PE=2 SV=2	[more]

BLAST of Cp4.1LG11g08780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599180.1	4.02e-209	86.08	putative pectinesterase 55, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG6599179.1	1.10e-168	71.31	putative pectinesterase 10, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946885.1	7.09e-162	70.88	putative pectinesterase 10 [Cucurbita moschata]	[more]
XP_023546427.1	1.52e-157	70.75	probable pectinesterase 29 [Cucurbita pepo subsp. pepo]	[more]
XP_023546426.1	2.16e-157	70.15	putative pectinesterase 10 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG11g08780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G5A0	3.43e-162	70.88	Pectinesterase OS=Cucurbita moschata OX=3662 GN=LOC111450826 PE=4 SV=1	[more]
A0A5A7U1G9	6.86e-145	61.90	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G00148...	[more]
A0A5D3BBR9	3.94e-144	61.62	Pectinesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00102...	[more]
A0A0A0LH00	1.00e-139	60.06	Pectinesterase OS=Cucumis sativus OX=3659 GN=Csa_2G034610 PE=4 SV=1	[more]
A0A1S4DZS3	1.14e-138	57.36	Pectinesterase OS=Cucumis melo OX=3656 GN=LOC103499379 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g08780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19150.1	3.4e-67	43.08	Pectin lyase-like superfamily protein	[more]
AT3G24130.1	5.9e-67	42.77	Pectin lyase-like superfamily protein	[more]
AT5G18990.1	7.7e-67	43.41	Pectin lyase-like superfamily protein	[more]
AT2G47280.1	4.2e-65	40.63	Pectin lyase-like superfamily protein	[more]
AT5G26810.1	2.6e-54	43.68	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000070	Pectinesterase, catalytic	PFAM	PF01095	Pectinesterase	coord: 62..324 e-value: 4.8E-56 score: 189.7
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 55..358 e-value: 3.2E-87 score: 294.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..331
None	No IPR available	PANTHER	PTHR31321:SF82	PECTINESTERASE	coord: 31..358
None	No IPR available	PANTHER	PTHR31321	ACYL-COA THIOESTER HYDROLASE YBHC-RELATED	coord: 31..358
IPR033131	Pectinesterase, Asp active site	PROSITE	PS00503	PECTINESTERASE_2	coord: 197..206
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 59..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08780.1	Cp4.1LG11g08780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042545	cell wall modification
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0045330	aspartyl esterase activity
molecular_function	GO:0030599	pectinesterase activity