Sequences
The following sequences are available for this feature:
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCGTGACGGACCAGACTAGGTCGTCGACGATCGGAAGGCTGAGAAGGCCGTTAGGCCAGCGGCGGAACCAGGCGGAACTCCAGTTCCATGAGAAGAGCGAGGAGAGGACGTCGCTCCACTGGAATGGCGATCTTGGTAACCTTCCCGCCATTGCCGCTCCTTCGTCTTCCTGA
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCGTGACGGACCAGACTAGGTCGTCGACGATCGGAAGGCTGAGAAGGCCGTTAGGCCAGCGGCGGAACCAGGCGGAACTCCAGTTCCATGAGAAGAGCGAGGAGAGGACGTCGCTCCACTGGAATGGCGATCTTGGTAACCTTCCCGCCATTGCCGCTCCTTCGTCTTCCTGA
ATGGAGACTAAGGCGACGGATTCGAAGGCGGTCGTGACGGACCAGACTAGGTCGTCGACGATCGGAAGGCTGAGAAGGCCGTTAGGCCAGCGGCGGAACCAGGCGGAACTCCAGTTCCATGAGAAGAGCGAGGAGAGGACGTCGCTCCACTGGAATGGCGATCTTGGTAACCTTCCCGCCATTGCCGCTCCTTCGTCTTCCTGA
METKATDSKAVVTDQTRSSTIGRLRRPLGQRRNQAELQFHEKSEERTSLHWNGDLGNLPAIAAPSSS
Homology
BLAST of Cp4.1LG11g08650 vs. NCBI nr
Match:
KAA0048079.1 (hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa])
HSP 1 Score: 81.3 bits (199), Expect = 3.11e-18
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Cp4.1LG11g08650 vs. ExPASy TrEMBL
Match:
A0A5A7U3P7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold385G001510 PE=4 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 1.51e-18
Identity = 50/81 (61.73%), Postives = 55/81 (67.90%), Query Frame = 0
BLAST of Cp4.1LG11g08650 vs. ExPASy TrEMBL
Match:
A0A0A0LGJ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1)
HSP 1 Score: 67.4 bits (163), Expect = 2.09e-13
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
Match Name E-value Identity Description
KAA0048079.1 3.11e-18 61.73 hypothetical protein E6C27_scaffold385G001510 [Cucumis melo var. makuwa] [more]
Match Name E-value Identity Description
A0A5A7U3P7 1.51e-18 61.73 Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more] A0A0A0LGJ2 2.09e-13 76.00 Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034630 PE=4 SV=1 [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
A T G G A G A C T A A G G C G A C G G A T T C G A A G G C G G T C G T G A C G G A C C A G A C T A G G T C G T C G A C G A T C G G A A G G C T G A G A A G G C C G T T A G G C C A G C G G C G G A A C C A G G C G G A A C T C C A G T T C C A T G A G A A G A G C G A G G A G A G G A C G T C G C T C C A C T G G A A T G G C G A T C T T G G T A A C C T T C C C G C C A T T G C C G C T C C T T C G T C T T C C T G A 20 40 60 80 100 120 140 160 180 200 Score = Score = Score = Sequence mobidb-lite mobidb-lite mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 8..23 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 35..49 None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 1..67
Relationships
The following mRNA feature(s) are a part of this gene:
