Cp4.1LG11g08460 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08460
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Loricrin
Location	Cp4.1LG11: 6897610 .. 6899050 (-)
RNA-Seq Expression	Cp4.1LG11g08460
Synteny	Cp4.1LG11g08460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCGAACGCCCACCTCACTTGGAGGCTTCAATTTTTTTGATTTCACAAACAAATTGCGTTCTGATTCTCACAGTATACAGGAAAACAAGCGCAATCCAATTCGTATTTTCGAAGAAATTCATTTCAATTCAATCCCAATCCCCGTTTTCTCCCTTTTATTCTTGTTCTTCGGTTTGGGATTTTACATTCATATATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTGAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCCATTTCAGATCCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGGTATTCATTCATCTTTCCTGTTCTTAATTAAACTTGATAGTTCATGAAGTTTGATGATATTGCTATGGTTTTTGTTTGTAGATGTTCATATGGGCACTGGAAGAAAACATTAAATTCAATTGGGTTTTGCTTGTTGAGGTATGTAACGAATTGTTATCCACGGATTGATTGATTTGATCAACTTTTCCCCACAATCTTCTCTTGTTTGCTAAGCAAATAGGAGAAATTTAGTGTTTGATGAAGCTCTGGCGTTCTGTTTAGTTTATTTGATAGTAGCCTATTGATATATGTTCATAGTTGGAATGCATACTCCAAAGGAATATGTTGACCAAATTAGCTTTACTTTACATTCCATACTTCTGTCATATGAGAATCTGAGTATGAGTTCTATGATCATTGAAGGAGTTTTACGTTTTTTCGTCGTGTCCCGGATGAACTCGACGATTCTATTCTGTGTTCAGTAGTTTAATGTTGTTCATGGATTGATAGATTTGATCAATTCTCTGCTATGCAAATGAGAGAAATTGTGTGTTTGGTTTATTAGATAGTATCCTATTGATGATGTATGTTCATAGCCGGAATATATTGACCAAATTAACTTTACTGAGCATCAAGTTTTCAATCCTCACTTTTGACATTTGAAAATCTAGATTGAGTTCTACAGTTCTTGAATGAGTTTTACATTTTTGTTTTATTGTTTTTGGATGATCCGACGATGTTATTTGTGTACGATATCCTTAATGTTTCGGACCGAGTAACATGAATGTTGAATGGT

mRNA sequence

CATCGAACGCCCACCTCACTTGGAGGCTTCAATTTTTTTGATTTCACAAACAAATTGCGTTCTGATTCTCACAGTATACAGGAAAACAAGCGCAATCCAATTCGTATTTTCGAAGAAATTCATTTCAATTCAATCCCAATCCCCGTTTTCTCCCTTTTATTCTTGTTCTTCGGTTTGGGATTTTACATTCATATATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTGAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCCATTTCAGATCCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGATGTTCATATGGGCACTGGAAGAAAACATTAAATTCAATTGGGTTTTGCTTGTTGAGGTATGTAACGAATTGTTATCCACGGATTGATTGATTTGATCAACTTTTCCCCACAATCTTCTCTTGTTTGCTAAGCAAATAGGAGAAATTTAGTGTTTGATGAAGCTCTGGCGTTCTGTTTAGTTTATTTGATAGTAGCCTATTGATATATGTTCATAGTTGGAATGCATACTCCAAAGGAATATGTTGACCAAATTAGCTTTACTTTACATTCCATACTTCTGTCATATGAGAATCTGAGTATGAGTTCTATGATCATTGAAGGAGTTTTACGTTTTTTCGTCGTGTCCCGGATGAACTCGACGATTCTATTCTGTGTTCAGTAGTTTAATGTTGTTCATGGATTGATAGATTTGATCAATTCTCTGCTATGCAAATGAGAGAAATTGTGTGTTTGGTTTATTAGATAGTATCCTATTGATGATGTATGTTCATAGCCGGAATATATTGACCAAATTAACTTTACTGAGCATCAAGTTTTCAATCCTCACTTTTGACATTTGAAAATCTAGATTGAGTTCTACAGTTCTTGAATGAGTTTTACATTTTTGTTTTATTGTTTTTGGATGATCCGACGATGTTATTTGTGTACGATATCCTTAATGTTTCGGACCGAGTAACATGAATGTTGAATGGT

Coding sequence (CDS)

ATGTTGGAATCAGGAAATGCTGAGAATCATCTCTCAGATGTTGGTTGCAGTGGTGTTAATGACGATGGTGATGATGAAGACGATGAGCGTCGTAAAAGTATGGCGAAGGCCCAAATTATCGCGCCTGATTTGGGTGAACAGAAGGGTTTTGGAAAGGCGAAACGAGTGATGTTGTATCCATTTCGAAAGGCGAAGAAACAGATTCTTCGGCGGAGGATTAAGAGAGATTCTTCTTCTTGTTCTTCTTCTTCTTCTTCTGTTGATTGTACTAGAAGAACAAGTTCTTCCGATAAAAGGGTTTTTGATGGAAGCGTTAATCAGGGCTGTGGTTTCTGTTTCATGAAACTTTCCATTTCAGATCCTAAGAATGGGCCTCCGACTGATCCTAATCACCGGAAGTTCACTAATGAAATGTTGAAAGTTCTTATTGAGAAGAATGATTTCTATTCCAAGGAATCCAATCCTCACTTGGATGTTCATATGGGCACTGGAAGAAAACATTAA

Protein sequence

MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISDPKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH

Homology

[Close]

BLAST of Cp4.1LG11g08460 vs. NCBI nr
Match: XP_023545330.1 (uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331.1 uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334 bits (857), Expect = 1.25e-115
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
           PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167

[Close]

BLAST of Cp4.1LG11g08460 vs. NCBI nr
Match: KAG6599154.1 (hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 322 bits (826), Expect = 6.43e-111
Identity = 163/167 (97.60%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
            KNGPPTDPNHRKF+NEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 SKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166

[Close]

BLAST of Cp4.1LG11g08460 vs. NCBI nr
Match: XP_022999773.1 (uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharacterized protein LOC111494022 [Cucurbita maxima])

HSP 1 Score: 320 bits (821), Expect = 3.72e-110
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDDGDDED+ERRKSMAK QIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
            KNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 SKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166

[Close]

BLAST of Cp4.1LG11g08460 vs. NCBI nr
Match: XP_022946062.1 (uncharacterized protein LOC111450262 [Cucurbita moschata] >XP_022946063.1 uncharacterized protein LOC111450262 [Cucurbita moschata])

HSP 1 Score: 319 bits (818), Expect = 1.07e-109
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDC RRTSSSDK VFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCNRRTSSSDKMVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
           PKNGPPTDPNHRKFTN+MLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 PKNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166

[Close]

BLAST of Cp4.1LG11g08460 vs. NCBI nr
Match: KAG7030094.1 (hypothetical protein SDJN02_08441, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301 bits (772), Expect = 1.31e-102
Identity = 153/160 (95.62%), Postives = 156/160 (97.50%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVH 160
            KNGPPTDPNHRKF+NEMLKVLIEKNDFYSKESNPHL +H
Sbjct: 121 SKNGPPTDPNHRKFSNEMLKVLIEKNDFYSKESNPHLGIH 159

[Close]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL
Match: A0A6J1KI22 (uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022 PE=4 SV=1)

HSP 1 Score: 320 bits (821), Expect = 1.80e-110
Identity = 162/167 (97.01%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDDGDDED+ERRKSMAK QIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDGDDEDNERRKSMAKGQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
            KNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 SKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166

[Close]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL
Match: A0A6J1G2R9 (uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC111450262 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 5.17e-110
Identity = 161/167 (96.41%), Postives = 163/167 (97.60%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGEQKGFGKAKRVMLYP 60
           MLESGNAENHLSDVGCSGVNDD DDEDDERRKSMAKAQIIAPDLG+QKGFGKAKRVMLYP
Sbjct: 1   MLESGNAENHLSDVGCSGVNDDADDEDDERRKSMAKAQIIAPDLGKQKGFGKAKRVMLYP 60

Query: 61  FRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCFMKLSISD 120
           FRKAKKQILRRRIKRDSSSCSSSSS VDC RRTSSSDK VFDGSVNQGCGFCFMKLSISD
Sbjct: 61  FRKAKKQILRRRIKRDSSSCSSSSS-VDCNRRTSSSDKMVFDGSVNQGCGFCFMKLSISD 120

Query: 121 PKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
           PKNGPPTDPNHRKFTN+MLKVLIEKNDFYSKESNPHLDVHMGTGRKH
Sbjct: 121 PKNGPPTDPNHRKFTNQMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 166

[Close]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL
Match: A0A0A0LH19 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1)

HSP 1 Score: 252 bits (643), Expect = 3.08e-83
Identity = 133/174 (76.44%), Postives = 145/174 (83.33%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGE-------QKGFGKA 60
           MLES +AEN++SDVGCSGVNDDGDDEDDE R +MAK QI   +  +       +KGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCF 120
           K+VM YPFRKAKKQILRRRIKRDSS CSSSSSSV C+RRT+S DKR FDGSVNQGCGFC 
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKRDSS-CSSSSSSVTCSRRTNSLDKRGFDGSVNQGCGFCL 120

Query: 121 MKLSISDPKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
            KLSISD KNG PTDPNHRKFTNEMLKVLIEKNDFYSKESNPH DV + T +KH
Sbjct: 121 TKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHFDVQVDTRQKH 173

[Close]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL
Match: A0A1S3BWA1 (uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 7.26e-81
Identity = 132/179 (73.74%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQIIAPDLGE-------QKGFGKA 60
           MLES +AEN++SDVGCSGVNDDGDDEDDE R +MAK QI   +  +       +KGFGKA
Sbjct: 1   MLESRHAENNISDVGCSGVNDDGDDEDDETRNTMAKTQIRDDEFDDDRKMEMGKKGFGKA 60

Query: 61  KRVMLYPFRKAKKQILRRRIKR-----DSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQG 120
           K+VM YPFRKAKKQILRRRIKR      SS CSSSS SV C+RRT+S DKR FDGSVNQG
Sbjct: 61  KQVMFYPFRKAKKQILRRRIKRGSSCSSSSPCSSSSPSVICSRRTNSLDKRGFDGSVNQG 120

Query: 121 CGFCFMKLSISDPKNGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRKH 167
           CGFC  KLSISD KNG PTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDV + T +KH
Sbjct: 121 CGFCLTKLSISDSKNGSPTDPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVQVDTRQKH 179

[Close]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL
Match: A0A6J1DRZ8 (uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023307 PE=4 SV=1)

HSP 1 Score: 197 bits (501), Expect = 1.07e-61
Identity = 118/174 (67.82%), Postives = 134/174 (77.01%), Query Frame = 0


Query: 1   MLESGNAENHLSDVGCSGVNDDGDDEDDERRKSMAKAQI---IAPDLGEQ----KGFGKA 60
           MLESG+AEN +SDVGCSGVNDD DDEDDE  K+MA AQI      D G++    +GFGKA
Sbjct: 1   MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKA 60

Query: 61  KRVMLYPFRKAKKQILRRRIKRDSSSCSSSSSSVDCTRRTSSSDKRVFDGSVNQGCGFCF 120
           K+V+ YPFRKAKKQILRR+IKR      +SSSS   T RT SSDKRV DGSVNQGCGFCF
Sbjct: 61  KQVISYPFRKAKKQILRRKIKR------ASSSSFTATSRTLSSDKRVVDGSVNQGCGFCF 120

Query: 121 MKLSISDPKNGPPT-DPNHRKFTNEMLKVLIEKNDFYSKESNPHLDVHMGTGRK 166
            +L ISD KNG  T DPN+RKFT+EMLK+LIEKNDFYSKE NPHLD  + T +K
Sbjct: 121 KEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLDSKVDTRQK 166

[Close]

BLAST of Cp4.1LG11g08460 vs. TAIR 10
Match: AT5G26720.1 (unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 3.9e-05
Identity = 18/34 (52.94%), Postives = 26/34 (76.47%), Query Frame = 0


Query: 123 NGPPTDPNHRKFTNEMLKVLIEKNDFYSKESNPH 157
           + P +DPN  +F++EML+V++E NDF S E NPH
Sbjct: 100 SSPVSDPNDERFSHEMLRVMLETNDFCSDECNPH 133

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08460 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG11g08460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545330.1	1.25e-115	100.00	uncharacterized protein LOC111804772 [Cucurbita pepo subsp. pepo] >XP_023545331....	[more]
KAG6599154.1	6.43e-111	97.60	hypothetical protein SDJN03_08932, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022999773.1	3.72e-110	97.01	uncharacterized protein LOC111494022 [Cucurbita maxima] >XP_022999774.1 uncharac...	[more]
XP_022946062.1	1.07e-109	96.41	uncharacterized protein LOC111450262 [Cucurbita moschata] >XP_022946063.1 unchar...	[more]
KAG7030094.1	1.31e-102	95.63	hypothetical protein SDJN02_08441, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of Cp4.1LG11g08460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KI22	1.80e-110	97.01	uncharacterized protein LOC111494022 OS=Cucurbita maxima OX=3661 GN=LOC111494022...	[more]
A0A6J1G2R9	5.17e-110	96.41	uncharacterized protein LOC111450262 OS=Cucurbita moschata OX=3662 GN=LOC1114502...	[more]
A0A0A0LH19	3.08e-83	76.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G035380 PE=4 SV=1	[more]
A0A1S3BWA1	7.26e-81	73.74	uncharacterized protein LOC103493824 OS=Cucumis melo OX=3656 GN=LOC103493824 PE=...	[more]
A0A6J1DRZ8	1.07e-61	67.82	uncharacterized protein LOC111023307 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]

BLAST of Cp4.1LG11g08460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G26720.1	3.9e-05	52.94	unknown protein; Has 15 Blast hits to 15 proteins in 5 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..46
None	No IPR available	PANTHER	PTHR35123:SF2	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE-LIKE PROTEIN	coord: 9..160
None	No IPR available	PANTHER	PTHR35123	OS07G0633900 PROTEIN-RELATED	coord: 9..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08460.1	Cp4.1LG11g08460.1	mRNA