Cp4.1LG11g08420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g08420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	autophagy-related protein 11-like isoform X1
Location	Cp4.1LG11: 6746732 .. 6748679 (-)
RNA-Seq Expression	Cp4.1LG11g08420
Synteny	Cp4.1LG11g08420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGTTAACTATTTTAAAAGTTATAACAATTTAAAGTTAAATTTAGCTAATTAGATTTTTTTTTAGGAGGTGATAGAGACATAGAAAAGTGTTCTATTTTGTGCCAATCTTATGTCCATATTTGAGAAAGAAATGCAAAATGTTCGAAGAGGCAATTTAGAAATTCGATAATTTACATTTTTGGTCTTTGAGATTTTGAATTTGTAATAAGTTCAGTTGTCGCTGTCGTCGCTAATATTAATCTAATAAGTTCTTTAGGGATAGGGCGTAATACTAATCTAATAAGTTCTTTAGGGATAGGACGACTGCTCGTGCATGCCCCCATAACCACATGAGCTCATCCTAAATGGAATGACTCTCTTGGTTACGCTACGCCCTGACCCGAGTCCCCATATCCGCTCTTCACCACCTGCAACCTAAGGAGAAATTTGTATTAGATGCTAATACTAATCTTATAAGTTCATTCGTCGCTGTCTAACCAATTGCACCAGACCATCACATTAAAAAGAGGCTCAAATGTACCTTGTTTCTTGTATTTTGTTGTACTTTTTTTCTGCAAATGAATGCATTCCTGCTATAAGTGGAATAACTATGATACGGATCTTTGAAAGTCATTGCCTGCTATTAGGGGTGTGGAAACCTCTCCCTAGCACACGCGCTTTAAAAACCTTGAGAGGAAGCCCATTAGGGAAAGCCTAAAGAGGACAATATCTGCTAATATGATCTTGGGATGCTACAAATGGTATCAGAGCCAAACACCGGGCGATGTGCCAGCAAGGAAGTTGAGCCCTGAAGGGGGCTGGACAAGGGTGGTGTGCCAGCAACGATGCTGGGCCTCGAAGGGGGGCGGATTGGGGGGTCCCATATCGATTAGAGAAGAAAATGAGTGCTAGCAAGGACACTGGGTCCCGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAAGGGAATGAAGCATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCATACACGTTTTAAAAACCTTGAGGGGAAGCCTGAAAGGGAAAACCCAAAGATGACAATATCTGCTAGATAAATTTGGGCTTTTACACCTTTTTATTTTCCATCTAGTTTTAATTCTGGATTCTAGAGATTTTCTTGTGCAAGTATTCATTTTATGAAATGTTTTTGTCTGATTTTTTATTAATGAAACCAACCTAGAATTTTATTAGTTCTGGCAGTGACAATGAAAATGATGGTACAAATGAATTCCGCCAATGTATCTGGGCTATAGCGGAGAGAGTTGGAATTTTGGTCGAACAGCACGATAAATACGCAAAACTCGAAGCTTCCCACGAACAACTTGTCAAAGAACTGGAAGAAAAGAAAGAACTTGTTAAAACTTTGTACGCAAAGCATCAACTCGAGAAGCAGGTAAACTTCCTTTGTGAGCTCCCCTTATACGATCCACTGACCTACACGATTCAAGTATGTCTTTAGTTTACGTTCGGGTTCCGATTTCATTTGATCTCGAGGGATTTACCGAATTGCTTCGTCATACAGGCAAACAAGGAGAAGATTTCTTTCGGTCGAATGGAAGTCCACGAGATTGCTGCGTTTGTTCGCAATGCAGCTGGGCATTATGAGGCGATCAATCGGAATTGCACCAACTACTACCTGTCTGCTGAATCAGTGGCTTTATTTGCAGACAATCCTCTAACCAGATCTAACTACATTGTTGGGCAGATTGTCCACATTGAACGTCAGACAGCGAAACCGTCACCACCTTCTCCTCAGCTCGATCAAGGTAGGGCGGATCAAACAGATCGTGTGATCTCCGACATGGGGACCGATGGGTTGACCTTGAATTCAGGTTTATCTTCGAACCCATATGGGTTCCCGGTCGGATGTGAATATTTTATAGTGACCATAGCGATGTTACCGGATACTGCTATTCATTCATCAGCTTCCTGA

mRNA sequence

ATGCCAATTGACAATGAAAATGATGGTACAAATGAATTCCGCCAATGTATCTGGGCTATAGCGGAGAGAGTTGGAATTTTGGTCGAACAGCACGATAAATACGCAAAACTCGAAGCTTCCCACGAACAACTTGTCAAAGAACTGGAAGAAAAGAAAGAACTTGTTAAAACTTTGTACGCAAAGCATCAACTCGAGAAGCAGGTAAACTTCCTTTGTGAGCTCCCCTTATACGATCCACTGACCTACACGATTCAATTTACGTTCGGGTTCCGATTTCATTTGATCTCGAGGGATTTACCGAATTGCTTCGTCATACAGGCAAACAAGGAGAAGATTTCTTTCGGTCGAATGGAAGTCCACGAGATTGCTGCGTTTGTTCGCAATGCAGCTGGGCATTATGAGGCGATCAATCGGAATTGCACCAACTACTACCTGTCTGCTGAATCAGTGGCTTTATTTGCAGACAATCCTCTAACCAGATCTAACTACATTGTTGGGCAGATTGTCCACATTGAACGTCAGACAGCGAAACCGTCACCACCTTCTCCTCAGCTCGATCAAGGTAGGGCGGATCAAACAGATCGTGTGATCTCCGACATGGGGACCGATGGGTTGACCTTGAATTCAGGTTTATCTTCGAACCCATATGGGTTCCCGGTCGGATGTGAATATTTTATAGTGACCATAGCGATGTTACCGGATACTGCTATTCATTCATCAGCTTCCTGA

Coding sequence (CDS)

ATGCCAATTGACAATGAAAATGATGGTACAAATGAATTCCGCCAATGTATCTGGGCTATAGCGGAGAGAGTTGGAATTTTGGTCGAACAGCACGATAAATACGCAAAACTCGAAGCTTCCCACGAACAACTTGTCAAAGAACTGGAAGAAAAGAAAGAACTTGTTAAAACTTTGTACGCAAAGCATCAACTCGAGAAGCAGGTAAACTTCCTTTGTGAGCTCCCCTTATACGATCCACTGACCTACACGATTCAATTTACGTTCGGGTTCCGATTTCATTTGATCTCGAGGGATTTACCGAATTGCTTCGTCATACAGGCAAACAAGGAGAAGATTTCTTTCGGTCGAATGGAAGTCCACGAGATTGCTGCGTTTGTTCGCAATGCAGCTGGGCATTATGAGGCGATCAATCGGAATTGCACCAACTACTACCTGTCTGCTGAATCAGTGGCTTTATTTGCAGACAATCCTCTAACCAGATCTAACTACATTGTTGGGCAGATTGTCCACATTGAACGTCAGACAGCGAAACCGTCACCACCTTCTCCTCAGCTCGATCAAGGTAGGGCGGATCAAACAGATCGTGTGATCTCCGACATGGGGACCGATGGGTTGACCTTGAATTCAGGTTTATCTTCGAACCCATATGGGTTCCCGGTCGGATGTGAATATTTTATAGTGACCATAGCGATGTTACCGGATACTGCTATTCATTCATCAGCTTCCTGA

Protein sequence

MPIDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS

Homology

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy Swiss-Prot
Match: Q9SUG7 (Autophagy-related protein 11 OS=Arabidopsis thaliana OX=3702 GN=ATG11 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-52
Identity = 126/250 (50.40%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQH----DKYAKLEASHEQLVKELEEKKELVKTLY 63
            +NE+DGT EFR+CI  +A++V  L +      +K   LEA+ EQ  K+LEEKKELVKTLY
Sbjct: 938  ENEDDGTTEFRKCIRVLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLY 997

Query: 64   AKHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEV 123
             KHQL K                                       QANKEKISFGR+EV
Sbjct: 998  TKHQLGK---------------------------------------QANKEKISFGRLEV 1057

Query: 124  HEIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPS 183
            HEIAAFV N AGHYEAINRNC NYYLS+ES ALF D+  +R  YIVGQIVHIERQ  K  
Sbjct: 1058 HEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYIVGQIVHIERQIVKLP 1117

Query: 184  PPSPQLDQGRADQTDRVISDMGTDGLTLNS-------GLSSNPYGFPVGCEYFIVTIAML 243
                      A +T  + SD G+  L  +S         +SNPYG   GCEYFIVTIAML
Sbjct: 1118 SQLSASASPEAGKTHHLCSDQGSRTLASSSISTSTSATTTSNPYGLSSGCEYFIVTIAML 1148

[Close]

BLAST of Cp4.1LG11g08420 vs. NCBI nr
Match: XP_023546467.1 (autophagy-related protein 11-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380 bits (977), Expect = 8.33e-121
Identity = 200/242 (82.64%), Postives = 201/242 (83.06%), Query Frame = 0


Query: 1    MPIDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA 60
            +  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA
Sbjct: 948  LANDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA 1007

Query: 61   KHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVH 120
            KHQLEK                                       QANKEKISFGRMEVH
Sbjct: 1008 KHQLEK---------------------------------------QANKEKISFGRMEVH 1067

Query: 121  EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 180
            EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP
Sbjct: 1068 EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 1127

Query: 181  PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS 240
            PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS
Sbjct: 1128 PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS 1150

Query: 241  AS 242
            AS
Sbjct: 1188 AS 1150

[Close]

BLAST of Cp4.1LG11g08420 vs. NCBI nr
Match: XP_023546466.1 (autophagy-related protein 11-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 380 bits (976), Expect = 1.23e-120
Identity = 200/239 (83.68%), Postives = 200/239 (83.68%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ
Sbjct: 954  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 1013

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGRMEVHEIA
Sbjct: 1014 LEK---------------------------------------QANKEKISFGRMEVHEIA 1073

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP
Sbjct: 1074 AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 1133

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS
Sbjct: 1134 QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 1153

[Close]

BLAST of Cp4.1LG11g08420 vs. NCBI nr
Match: KAG6599138.1 (Autophagy-related protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030080.1 Autophagy-related protein 11 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 373 bits (957), Expect = 7.23e-118
Identity = 197/239 (82.43%), Postives = 197/239 (82.43%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEAS EQLVKELEEKKELVKTLYAKHQ
Sbjct: 954  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASREQLVKELEEKKELVKTLYAKHQ 1013

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGRMEVHEIA
Sbjct: 1014 LEK---------------------------------------QANKEKISFGRMEVHEIA 1073

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP
Sbjct: 1074 AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 1133

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            QLDQGR DQTDRV SDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS
Sbjct: 1134 QLDQGRVDQTDRVNSDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 1153

[Close]

BLAST of Cp4.1LG11g08420 vs. NCBI nr
Match: XP_022946195.1 (autophagy-related protein 11-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 371 bits (952), Expect = 3.68e-117
Identity = 196/242 (80.99%), Postives = 197/242 (81.40%), Query Frame = 0


Query: 1    MPIDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA 60
            +  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEE KELVKTLYA
Sbjct: 948  LANDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEETKELVKTLYA 1007

Query: 61   KHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVH 120
            KHQLEK                                       QANKEKISFGRMEVH
Sbjct: 1008 KHQLEK---------------------------------------QANKEKISFGRMEVH 1067

Query: 121  EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 180
            EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP
Sbjct: 1068 EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 1127

Query: 181  PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS 240
            PSPQLDQGR DQTDRV SDMGTDGLTLNSGLSSNPY FPVGCEYFIVTIAMLPDTAIHSS
Sbjct: 1128 PSPQLDQGRVDQTDRVNSDMGTDGLTLNSGLSSNPYRFPVGCEYFIVTIAMLPDTAIHSS 1150

Query: 241  AS 242
            AS
Sbjct: 1188 AS 1150

[Close]

BLAST of Cp4.1LG11g08420 vs. NCBI nr
Match: XP_022946194.1 (autophagy-related protein 11-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 370 bits (951), Expect = 5.41e-117
Identity = 196/239 (82.01%), Postives = 196/239 (82.01%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEE KELVKTLYAKHQ
Sbjct: 954  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEETKELVKTLYAKHQ 1013

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGRMEVHEIA
Sbjct: 1014 LEK---------------------------------------QANKEKISFGRMEVHEIA 1073

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP
Sbjct: 1074 AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 1133

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            QLDQGR DQTDRV SDMGTDGLTLNSGLSSNPY FPVGCEYFIVTIAMLPDTAIHSSAS
Sbjct: 1134 QLDQGRVDQTDRVNSDMGTDGLTLNSGLSSNPYRFPVGCEYFIVTIAMLPDTAIHSSAS 1153

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL
Match: A0A6J1G349 (autophagy-related protein 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111450351 PE=4 SV=1)

HSP 1 Score: 371 bits (952), Expect = 1.78e-117
Identity = 196/242 (80.99%), Postives = 197/242 (81.40%), Query Frame = 0


Query: 1    MPIDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA 60
            +  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEE KELVKTLYA
Sbjct: 948  LANDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEETKELVKTLYA 1007

Query: 61   KHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVH 120
            KHQLEK                                       QANKEKISFGRMEVH
Sbjct: 1008 KHQLEK---------------------------------------QANKEKISFGRMEVH 1067

Query: 121  EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 180
            EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP
Sbjct: 1068 EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 1127

Query: 181  PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS 240
            PSPQLDQGR DQTDRV SDMGTDGLTLNSGLSSNPY FPVGCEYFIVTIAMLPDTAIHSS
Sbjct: 1128 PSPQLDQGRVDQTDRVNSDMGTDGLTLNSGLSSNPYRFPVGCEYFIVTIAMLPDTAIHSS 1150

Query: 241  AS 242
            AS
Sbjct: 1188 AS 1150

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL
Match: A0A6J1G340 (autophagy-related protein 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111450351 PE=4 SV=1)

HSP 1 Score: 370 bits (951), Expect = 2.62e-117
Identity = 196/239 (82.01%), Postives = 196/239 (82.01%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEE KELVKTLYAKHQ
Sbjct: 954  DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEETKELVKTLYAKHQ 1013

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGRMEVHEIA
Sbjct: 1014 LEK---------------------------------------QANKEKISFGRMEVHEIA 1073

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP
Sbjct: 1074 AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 1133

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            QLDQGR DQTDRV SDMGTDGLTLNSGLSSNPY FPVGCEYFIVTIAMLPDTAIHSSAS
Sbjct: 1134 QLDQGRVDQTDRVNSDMGTDGLTLNSGLSSNPYRFPVGCEYFIVTIAMLPDTAIHSSAS 1153

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL
Match: A0A6J1KBB6 (autophagy-related protein 11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111493926 PE=4 SV=1)

HSP 1 Score: 363 bits (932), Expect = 1.45e-114
Identity = 193/242 (79.75%), Postives = 195/242 (80.58%), Query Frame = 0


Query: 1    MPIDNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYA 60
            +  DNENDGTNEFRQCIWAIAERVGILVEQHDK AKLEAS EQLVKELEEKKELVKTLYA
Sbjct: 948  LANDNENDGTNEFRQCIWAIAERVGILVEQHDKCAKLEASREQLVKELEEKKELVKTLYA 1007

Query: 61   KHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVH 120
            KHQLEK                                       QANKEKISFGR+EVH
Sbjct: 1008 KHQLEK---------------------------------------QANKEKISFGRLEVH 1067

Query: 121  EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 180
            EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP
Sbjct: 1068 EIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSP 1127

Query: 181  PSPQLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSS 240
            PSPQLDQGR DQTDRVI D GTDGLTLNSGLSSN YGFPVGCEYFIVTIAMLPDTAIHSS
Sbjct: 1128 PSPQLDQGRVDQTDRVIPDTGTDGLTLNSGLSSNLYGFPVGCEYFIVTIAMLPDTAIHSS 1150

Query: 241  AS 242
            AS
Sbjct: 1188 AS 1150

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL
Match: A0A6J1KDL0 (autophagy-related protein 11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111493926 PE=4 SV=1)

HSP 1 Score: 363 bits (931), Expect = 2.12e-114
Identity = 193/239 (80.75%), Postives = 194/239 (81.17%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVGILVEQHDK AKLEAS EQLVKELEEKKELVKTLYAKHQ
Sbjct: 954  DNENDGTNEFRQCIWAIAERVGILVEQHDKCAKLEASREQLVKELEEKKELVKTLYAKHQ 1013

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGR+EVHEIA
Sbjct: 1014 LEK---------------------------------------QANKEKISFGRLEVHEIA 1073

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP
Sbjct: 1074 AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 1133

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            QLDQGR DQTDRVI D GTDGLTLNSGLSSN YGFPVGCEYFIVTIAMLPDTAIHSSAS
Sbjct: 1134 QLDQGRVDQTDRVIPDTGTDGLTLNSGLSSNLYGFPVGCEYFIVTIAMLPDTAIHSSAS 1153

[Close]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL
Match: A0A0A0LGN4 (ATG11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036630 PE=4 SV=1)

HSP 1 Score: 338 bits (866), Expect = 3.07e-105
Identity = 179/239 (74.90%), Postives = 186/239 (77.82%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQHDKYAKLEASHEQLVKELEEKKELVKTLYAKHQ 63
            DNENDGTNEFRQCIWAIAERVG LV+QH+KYAKLEA++EQLVKELEEKKELVKTLY KHQ
Sbjct: 914  DNENDGTNEFRQCIWAIAERVGHLVKQHEKYAKLEATNEQLVKELEEKKELVKTLYTKHQ 973

Query: 64   LEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEVHEIA 123
            LEK                                       QANKEKISFGRMEVHEIA
Sbjct: 974  LEK---------------------------------------QANKEKISFGRMEVHEIA 1033

Query: 124  AFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPSPPSP 183
            AFVRNAAGHYEAINRNC NYYLSAESVALFADN LTRSNYIVGQIVHIE QT KPSPPSP
Sbjct: 1034 AFVRNAAGHYEAINRNCANYYLSAESVALFADNLLTRSNYIVGQIVHIEHQTVKPSPPSP 1093

Query: 184  QLDQGRADQTDRVISDMGTDGLTLNSGLSSNPYGFPVGCEYFIVTIAMLPDTAIHSSAS 242
            + D G  DQTD VISD GTD LTLNSGLSSNPYG PVGCEYFIVT+AMLPDTAIHS+AS
Sbjct: 1094 RRDHGTVDQTDCVISDSGTDRLTLNSGLSSNPYGLPVGCEYFIVTVAMLPDTAIHSTAS 1113

[Close]

BLAST of Cp4.1LG11g08420 vs. TAIR 10
Match: AT4G30790.1 (INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17 (InterPro:IPR007240), Autophagy-related protein 11 (InterPro:IPR019460); Has 8793 Blast hits to 6268 proteins in 570 species: Archae - 89; Bacteria - 657; Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15; Other Eukaryotes - 1939 (source: NCBI BLink). )

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 126/250 (50.40%), Postives = 145/250 (58.00%), Query Frame = 0


Query: 4    DNENDGTNEFRQCIWAIAERVGILVEQH----DKYAKLEASHEQLVKELEEKKELVKTLY 63
            +NE+DGT EFR+CI  +A++V  L +      +K   LEA+ EQ  K+LEEKKELVKTLY
Sbjct: 938  ENEDDGTTEFRKCIRVLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLY 997

Query: 64   AKHQLEKQVNFLCELPLYDPLTYTIQFTFGFRFHLISRDLPNCFVIQANKEKISFGRMEV 123
             KHQL K                                       QANKEKISFGR+EV
Sbjct: 998  TKHQLGK---------------------------------------QANKEKISFGRLEV 1057

Query: 124  HEIAAFVRNAAGHYEAINRNCTNYYLSAESVALFADNPLTRSNYIVGQIVHIERQTAKPS 183
            HEIAAFV N AGHYEAINRNC NYYLS+ES ALF D+  +R  YIVGQIVHIERQ  K  
Sbjct: 1058 HEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYIVGQIVHIERQIVKLP 1117

Query: 184  PPSPQLDQGRADQTDRVISDMGTDGLTLNS-------GLSSNPYGFPVGCEYFIVTIAML 243
                      A +T  + SD G+  L  +S         +SNPYG   GCEYFIVTIAML
Sbjct: 1118 SQLSASASPEAGKTHHLCSDQGSRTLASSSISTSTSATTTSNPYGLSSGCEYFIVTIAML 1148

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g08420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUG7	2.1e-52	50.40	Autophagy-related protein 11 OS=Arabidopsis thaliana OX=3702 GN=ATG11 PE=1 SV=1	[more]

BLAST of Cp4.1LG11g08420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546467.1	8.33e-121	82.64	autophagy-related protein 11-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023546466.1	1.23e-120	83.68	autophagy-related protein 11-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6599138.1	7.23e-118	82.43	Autophagy-related protein 11, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022946195.1	3.68e-117	80.99	autophagy-related protein 11-like isoform X2 [Cucurbita moschata]	[more]
XP_022946194.1	5.41e-117	82.01	autophagy-related protein 11-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Cp4.1LG11g08420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G349	1.78e-117	80.99	autophagy-related protein 11-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1G340	2.62e-117	82.01	autophagy-related protein 11-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KBB6	1.45e-114	79.75	autophagy-related protein 11-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1KDL0	2.12e-114	80.75	autophagy-related protein 11-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A0A0LGN4	3.07e-105	74.90	ATG11 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G036630 PE=4 ...	[more]

BLAST of Cp4.1LG11g08420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30790.1	1.5e-53	50.40	INVOLVED IN: autophagy; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..65
None	No IPR available	PANTHER	PTHR13222:SF3	AUTOPHAGY-RELATED PROTEIN 11, UBIQUITIN-RELATED DOMAIN PROTEIN-RELATED	coord: 106..239 coord: 4..69
IPR019460	Autophagy-related protein 11, C-terminal	PFAM	PF10377	ATG11	coord: 106..230 e-value: 1.6E-16 score: 60.6
IPR040040	Autophagy-related protein 11	PANTHER	PTHR13222	RB1-INDUCIBLE COILED-COIL	coord: 4..69
IPR040040	Autophagy-related protein 11	PANTHER	PTHR13222	RB1-INDUCIBLE COILED-COIL	coord: 106..239

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g08420.1	Cp4.1LG11g08420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000045	autophagosome assembly
biological_process	GO:0000422	autophagy of mitochondrion