Cp4.1LG11g07030 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g07030
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDCD domain-containing protein
LocationCp4.1LG11: 5531134 .. 5531565 (+)
RNA-Seq ExpressionCp4.1LG11g07030
SyntenyCp4.1LG11g07030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAACACTGCAAACAGGGAATCTGGAGAACCTCTTGCGCAACAATTCTATATAAAGCAATTTTTTTCAGTCTCGAAAAGGCACAAGGAGGAGGAATTTCGATGTGTGAAATGGTGGAGAGGTAAACTCGCTAAAAAGTTTAAGCCCGAAGTGTCTGATTCTGAATTTCTGATGTTAATAGGTTTGATGATGGATAGAATAGTTTTAAAGCTGAGTGTTTGTTATGATCTTAATAATTGGAGCAACACTAGCAGCAGTAGCAATCTGAGTTCAACTAGATATGAAATTAATTCACTTAATGTGTTTGATAATGGGTGGAATAGCTTCAAGCCAAAGGGTCTGATTGTAATGTCTTTAATGGTGGGTGAAAGGTTAAATCTGGAAATATGGGGTAGATCCTGTGATTGGAAGAGCCCAAAAGGGTTTTAG

mRNA sequence

ATGTCAAACACTGCAAACAGGGAATCTGGAGAACCTCTTGCGCAACAATTCTATATAAAGCAATTTTTTTCAGTCTCGAAAAGGCACAAGGAGGAGGAATTTCGATGTGTGAAATGGTGGAGAGGTAAACTCGCTAAAAAGTTTAAGCCCGAAGTGTCTGATTCTGAATTTCTGATGTTAATAGGTTTGATGATGGATAGAATAGTTTTAAAGCTGAGTGTTTGTTATGATCTTAATAATTGGAGCAACACTAGCAGCAGTAGCAATCTGAGTTCAACTAGATATGAAATTAATTCACTTAATGTGTTTGATAATGGGTGGAATAGCTTCAAGCCAAAGGGTCTGATTGTAATGTCTTTAATGGTGGGTGAAAGGTTAAATCTGGAAATATGGGGTAGATCCTGTGATTGGAAGAGCCCAAAAGGGTTTTAG

Coding sequence (CDS)

ATGTCAAACACTGCAAACAGGGAATCTGGAGAACCTCTTGCGCAACAATTCTATATAAAGCAATTTTTTTCAGTCTCGAAAAGGCACAAGGAGGAGGAATTTCGATGTGTGAAATGGTGGAGAGGTAAACTCGCTAAAAAGTTTAAGCCCGAAGTGTCTGATTCTGAATTTCTGATGTTAATAGGTTTGATGATGGATAGAATAGTTTTAAAGCTGAGTGTTTGTTATGATCTTAATAATTGGAGCAACACTAGCAGCAGTAGCAATCTGAGTTCAACTAGATATGAAATTAATTCACTTAATGTGTTTGATAATGGGTGGAATAGCTTCAAGCCAAAGGGTCTGATTGTAATGTCTTTAATGGTGGGTGAAAGGTTAAATCTGGAAATATGGGGTAGATCCTGTGATTGGAAGAGCCCAAAAGGGTTTTAG

Protein sequence

MSNTANRESGEPLAQQFYIKQFFSVSKRHKEEEFRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRIVLKLSVCYDLNNWSNTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLNLEIWGRSCDWKSPKGF
Homology
BLAST of Cp4.1LG11g07030 vs. NCBI nr
Match: KAG6600507.1 (hypothetical protein SDJN03_05740, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.7 bits (195), Expect = 2.55e-14
Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH+E   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEERRNFYVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLN 127
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG    S   G +LN
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKGSDFNSFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. NCBI nr
Match: XP_023527841.1 (uncharacterized protein DDB_G0283357 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.7 bits (195), Expect = 2.55e-14
Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH+E   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEERRNFDVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLN 127
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG    S   G +LN
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKGSDFNSFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. NCBI nr
Match: KAG7031145.1 (hypothetical protein SDJN02_05184 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.7 bits (195), Expect = 2.55e-14
Identity = 52/105 (49.52%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH+E   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEERRNFDVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLN 127
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG    S   G +LN
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKGSDFNSFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. NCBI nr
Match: XP_038900602.1 (DCD domain-containing protein NRP-B [Benincasa hispida])

HSP 1 Score: 79.0 bits (193), Expect = 4.80e-14
Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 48  FKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWSNTSSSSNLSSTRYEINSLNVFDNG 107
           FKP+VSDS+    +    D     K SV  DLNNWSNTSSS N SST YE N+LNVFDNG
Sbjct: 61  FKPKVSDSD----VNRFNDGWNSFKPSVASDLNNWSNTSSSINSSSTGYEKNALNVFDNG 120

Query: 108 WNSFKPKGLIVMSLMVGERLN 127
           WNSFKPKG    +   G +LN
Sbjct: 121 WNSFKPKGSDFNAFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. NCBI nr
Match: XP_022942139.1 (putative uncharacterized protein DDB_G0282133 [Cucurbita moschata])

HSP 1 Score: 78.6 bits (192), Expect = 6.65e-14
Identity = 51/105 (48.57%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH++   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEDRRNFDVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLN 127
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG    S   G +LN
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKGSDFNSFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. ExPASy TrEMBL
Match: A0A6J1FQF7 (DCD domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111447293 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.22e-14
Identity = 51/105 (48.57%), Postives = 62/105 (59.05%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH++   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEDRRNFDVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKGLIVMSLMVGERLN 127
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG    S   G +LN
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKGSDFNSFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. ExPASy TrEMBL
Match: A0A0A0KV48 (DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052730 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 7.11e-14
Identity = 46/81 (56.79%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 48  FKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWSNTSSSSNLSSTRYEINSLNVFDNG 107
           FKP+VSDS+    +    D     K SV  DLNNWSNTS+S NLSST YE N+LNVFDNG
Sbjct: 61  FKPKVSDSD----VNRFNDGWNSFKPSVASDLNNWSNTSNSMNLSSTGYEKNALNVFDNG 120

Query: 108 WNSFKPKGLIVMSLMVGERLN 127
           WNSFK KG    +   G +LN
Sbjct: 121 WNSFKSKGSDFNAFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. ExPASy TrEMBL
Match: A0A6J1IWU2 (B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480622 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 8.42e-14
Identity = 48/92 (52.17%), Postives = 57/92 (61.96%), Query Frame = 0

Query: 25  VSKRHKEEE-FRCVKWWRGKLAKKFKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWS 84
           VSKRH+E   F             FKPEVSDS+    +  + D     K SV  DL NWS
Sbjct: 37  VSKRHEERRNFDVRSGGEVNSLTNFKPEVSDSD----VNRLKDGWNSFKPSVASDLMNWS 96

Query: 85  NTSSSSNLSSTRYEINSLNVFDNGWNSFKPKG 114
           N+S SSNLSS+ +E N+LN+FDNGWNSFKPKG
Sbjct: 97  NSSGSSNLSSSGFEKNALNMFDNGWNSFKPKG 124

BLAST of Cp4.1LG11g07030 vs. ExPASy TrEMBL
Match: A0A5D3CZ33 (Putative cyclin-dependent serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G003540 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.58e-13
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 48  FKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWSNTSSSSNLSSTRYEINSLNVFDNG 107
           FKP+VSDS+    +    D     K SV  DLNNWSNTS+S N+SST YE N+LNVFDNG
Sbjct: 61  FKPKVSDSD----VNRFNDGWNSFKPSVASDLNNWSNTSNSMNMSSTGYEKNALNVFDNG 120

Query: 108 WNSFKPKGLIVMSLMVGERLN 127
           WNSFK KG    +   G +LN
Sbjct: 121 WNSFKSKGSDFNAFNDGWKLN 137

BLAST of Cp4.1LG11g07030 vs. ExPASy TrEMBL
Match: A0A1S3BTF4 (DCD domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103493079 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.58e-13
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0

Query: 48  FKPEVSDSEFLMLIGLMMDRI-VLKLSVCYDLNNWSNTSSSSNLSSTRYEINSLNVFDNG 107
           FKP+VSDS+    +    D     K SV  DLNNWSNTS+S N+SST YE N+LNVFDNG
Sbjct: 61  FKPKVSDSD----VNRFNDGWNSFKPSVASDLNNWSNTSNSMNMSSTGYEKNALNVFDNG 120

Query: 108 WNSFKPKGLIVMSLMVGERLN 127
           WNSFK KG    +   G +LN
Sbjct: 121 WNSFKSKGSDFNAFNDGWKLN 137

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6600507.12.55e-1449.52hypothetical protein SDJN03_05740, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023527841.12.55e-1449.52uncharacterized protein DDB_G0283357 [Cucurbita pepo subsp. pepo][more]
KAG7031145.12.55e-1449.52hypothetical protein SDJN02_05184 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_038900602.14.80e-1458.02DCD domain-containing protein NRP-B [Benincasa hispida][more]
XP_022942139.16.65e-1448.57putative uncharacterized protein DDB_G0282133 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1FQF73.22e-1448.57DCD domain-containing protein OS=Cucurbita moschata OX=3662 GN=LOC111447293 PE=4... [more]
A0A0A0KV487.11e-1456.79DCD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G052730 PE=4 SV... [more]
A0A6J1IWU28.42e-1452.17B2 protein-like OS=Cucurbita maxima OX=3661 GN=LOC111480622 PE=4 SV=1[more]
A0A5D3CZ331.58e-1355.56Putative cyclin-dependent serine/threonine-protein kinase OS=Cucumis melo var. m... [more]
A0A1S3BTF41.58e-1355.56DCD domain-containing protein OS=Cucumis melo OX=3656 GN=LOC103493079 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g07030.1Cp4.1LG11g07030.1mRNA