Cp4.1LG11g06540 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g06540
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	LOB domain-containing protein
Location	Cp4.1LG11: 4450407 .. 4451997 (+)
RNA-Seq Expression	Cp4.1LG11g06540
Synteny	Cp4.1LG11g06540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGCCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGATGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCTCTGATTTCCTCGCCTTCTCCTCTTACTGCACAGCGGAACCACCAACCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAGATGATGCTCCGACGAAGCTTCGACGGTGGTACTAACTACGACGGACTTTTGGCCGTCAATGTCACCGTCGGTAACCTTACCCACCCGTTCCAGCAATCTCGCGCCGCTGCTGGAGACGATCGTCGCGGAACTCTCGACCATTCTTAGGGTTTGGTTTTCTTTTCTCTTTCTTTTTTTTTTTCTTTTTTTTCTTTTTTTCCTGAAAAAAAAATCATAAACTGTTGCGGAAAAACGTGATTTTCCTGCTAATTTATATATATAACAATAAAATTATTATCTATTTTTGTTTTTATTATTGTGGTCCTCCAAATTTTTCTTTTTCTTTTTCTAATAAATGAAAATATTATGGTAATAAAACCTATGTATTTATTCATTTGAAAATAAATAATAATAATAATAATAATATTTATGAGTAATTTTGGGTCAGAAAAAGGGTGGAAGTATTCATTATTATTCTTTTTGTTTGGTACATAATATTAATGATATTACTGTTGTATGTATGTTTCTTTCTGTTGCCTCAAATGGTGCTTTCATAAATGCATATCTCATTTGCCCTACCTATATCACCTTACTATTTACTCCTTTTATTCCCGATAATTTGCACGACAGGACACGGGTGTTCATAGGTTAGGTTGAGTTGAGACAATTCTGACTCGAGTGTTCGTAGGTTAGGTTGAGTTGAGACGATTTTTAGATTCAATTCAATCGGTCGGGTTGTAAATTTTTTTCAACTAAAATAACTCTTATTAAATAATAAACTATCCCGATAGACATTTATTGTCAATTTAATTTGTTTTCATTAAATAATAATTATTATGAAATTAAATATATATATATATATATAATTGTGGGATAAGTAAAAAACGTATATTTTAAAATTAATAAATTCAGGTTGGTTCGATTCAATCTAATCTAGTTGGAATAGGTTGGAGGAGTTGTTTGAATAGTTTTAATAAATATTTATTTTAATTTTGTATAATAATTACTTAATATTATGTTATTTTAAAATTTTAATATATATAGTAATTATCAATTTTTTTTTAAAGTGTTTCTTAATTATCATATTCTTAAAGTTATTTTCATTTCTTTCTAA

mRNA sequence

ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGCCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGATGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCTCTGATTTCCTCGCCTTCTCCTCTTACTGCACAGCGGAACCACCAACCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAGATGATGCTCCGACGAAGCTTCGACGGTGGTACTAACTACGACGGACTTTTGGCCGTCAATGTCACCGTCGTTATTTTCATTTCTTTCTAA

Coding sequence (CDS)

ATGGCATCCACCTCCTCCAATTCGCCCTGTGCTGCTTGCAAATTCCTCCGCCGTAAATGCCAACCGGAATGTGTTTTCGCGCCCTATTTCCCGCCGGATCAGCCTCAGAAATTCGCGAATGTTCATAAGGTATTTGGCGCTAGTAATGTCACTAAACTTCTCAACGAATTGCATCCTCACCAGCGCGAAGATGCTGTTAATTCTCTCGCTTATGAAGCCGATATGCGTCTCCGTGATCCTGTTTATGGCTGTGTTGGAGTAATTTCTCTGCTTCAACATCAACTCTGTAAACTCCAAATGGATCTCACTTCCGCTAAATCCGAACTCTCTAAGTATAAAACCCTAGGCATTGGGAACCCCGCCGCTCTGATTTCCTCGCCTTCTCCTCTTACTGCACAGCGGAACCACCAACCGACGTTTAATTTTGGTAGAGATCAACCTCATAGTCTCTGTTACGATCAATTTTTCCCTCGCGATCAACAACAACAACAACAACAGATGATGCTCCGACGAAGCTTCGACGGTGGTACTAACTACGACGGACTTTTGGCCGTCAATGTCACCGTCGTTATTTTCATTTCTTTCTAA

Protein sequence

MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPAALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYDGLLAVNVTVVIFISF

Homology

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot
Match: O04479 (Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 5.3e-59
Identity = 128/186 (68.82%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AA   S            T    RD  H   + QFFPR      +QM        G NYD
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPR------EQMFGGLDVPAGNNYD 175

Query: 181 -GLLAV 186
            G+LA+
Sbjct: 181 GGILAI 175

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot
Match: Q32SG3 (LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-50
Identity = 107/181 (59.12%), Postives = 120/181 (66.30%), Query Frame = 0


Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A   + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP Q
Sbjct: 26  AVCGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQ 85

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCVGVIS+LQH L +LQ DL  AK ELSKY+     + +
Sbjct: 86  REDAVNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASAS 145

Query: 122 ALISSPSPL-----TAQRNHQPTF-NFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDG 177
              + P  +      A  N    F N G                Q+Q     ML RS+DG
Sbjct: 146 TAPTGPQAMAEFIGNAMPNGAHNFINIGHSAALGSLGGSASVFGQEQFGNAQMLSRSYDG 205

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot
Match: A1YKY7 (Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.5e-48
Identity = 106/187 (56.68%), Postives = 120/187 (64.17%), Query Frame = 0


Query: 6   SNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDA 65
           + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF  VH+VFGASNVTKL+NE+HP QREDA
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVRVHRVFGASNVTKLMNEIHPLQREDA 89

Query: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP----- 125
           +NSLAYEADMR+RDPVYGCVGVIS+LQH L +LQ DL  AK ELSKY+     +      
Sbjct: 90  MNSLAYEADMRIRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 126 -----AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQ------FFPRDQQQQQQQMML 177
                A  I S  P  A  N     N G    HS            F + +Q      ML
Sbjct: 150 GPQAMAEFIGSAMPNGAAHNF---INLG----HSAALGSLGGSTAMFGQQEQFGSNAQML 209

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-48
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKY+       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 ALISS 127
           A  S+
Sbjct: 151 ASAST 155

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.5e-48
Identity = 92/125 (73.60%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           A+  + SPCAACKFLRRKCQP+CVFAPYFPPD PQKF +VH+VFGASNVTKLLNELHP+Q
Sbjct: 31  AACGTGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPYQ 90

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNPA 121
           REDAVNSLAYEADMRLRDPVYGCV +IS+LQ  L +LQ DL  AK ELSKY+       A
Sbjct: 91  REDAVNSLAYEADMRLRDPVYGCVAIISILQRNLRQLQQDLARAKFELSKYQQAAAAAAA 150

Query: 122 ALISS 127
           A  S+
Sbjct: 151 ASAST 155

[Close]

BLAST of Cp4.1LG11g06540 vs. NCBI nr
Match: XP_023546811.1 (LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo] >XP_023546812.1 LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388 bits (996), Expect = 1.32e-135
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD
Sbjct: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180

Query: 181 GLLAVNVTV 189
           GLLAVNVTV
Sbjct: 181 GLLAVNVTV 189

[Close]

BLAST of Cp4.1LG11g06540 vs. NCBI nr
Match: XP_022929710.1 (LOB domain-containing protein 6 [Cucurbita moschata] >XP_022929711.1 LOB domain-containing protein 6 [Cucurbita moschata])

HSP 1 Score: 382 bits (981), Expect = 2.94e-133
Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ----MMLRRSFDGG 180
           AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ    MMLRRSFDGG
Sbjct: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQQMMLRRSFDGG 180

Query: 181 TNYDGLLAVNVTV 189
           TNYDGLLAVNVTV
Sbjct: 181 TNYDGLLAVNVTV 193

[Close]

BLAST of Cp4.1LG11g06540 vs. NCBI nr
Match: KAG6598922.1 (Protein ASYMMETRIC LEAVES 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 381 bits (979), Expect = 6.37e-133
Identity = 189/195 (96.92%), Postives = 189/195 (96.92%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ------MMLRRSFD 180
           AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ      MMLRRSFD
Sbjct: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQQQQMMLRRSFD 180

Query: 181 GGTNYDGLLAVNVTV 189
           GGTNYDGLLAVNVTV
Sbjct: 181 GGTNYDGLLAVNVTV 195

[Close]

BLAST of Cp4.1LG11g06540 vs. NCBI nr
Match: KAG7029877.1 (LOB domain-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 381 bits (978), Expect = 9.38e-133
Identity = 189/196 (96.43%), Postives = 189/196 (96.43%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ-------MMLRRSF 180
           AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ       MMLRRSF
Sbjct: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQQQQQMMLRRSF 180

Query: 181 DGGTNYDGLLAVNVTV 189
           DGGTNYDGLLAVNVTV
Sbjct: 181 DGGTNYDGLLAVNVTV 196

[Close]

BLAST of Cp4.1LG11g06540 vs. NCBI nr
Match: XP_022996817.1 (LOB domain-containing protein 6 [Cucurbita maxima])

HSP 1 Score: 378 bits (971), Expect = 9.49e-132
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ---MMLRRSFDGGT 180
           AALISSPS LTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ   MMLRR+FDGGT
Sbjct: 121 AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGT 180

Query: 181 NYDGLLAVNVTV 189
           NYDGLLAVNVTV
Sbjct: 181 NYDGLLAVNVTV 192

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL
Match: A0A6J1EV32 (LOB domain-containing protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111436210 PE=3 SV=1)

HSP 1 Score: 382 bits (981), Expect = 1.42e-133
Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ----MMLRRSFDGG 180
           AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ    MMLRRSFDGG
Sbjct: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQQMMLRRSFDGG 180

Query: 181 TNYDGLLAVNVTV 189
           TNYDGLLAVNVTV
Sbjct: 181 TNYDGLLAVNVTV 193

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL
Match: A0A6J1K327 (LOB domain-containing protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491944 PE=3 SV=1)

HSP 1 Score: 378 bits (971), Expect = 4.59e-132
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ---MMLRRSFDGGT 180
           AALISSPS LTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ   MMLRR+FDGGT
Sbjct: 121 AALISSPSSLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQQQQMMLRRNFDGGT 180

Query: 181 NYDGLLAVNVTV 189
           NYDGLLAVNVTV
Sbjct: 181 NYDGLLAVNVTV 192

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL
Match: A0A1S3B5A0 (LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=1)

HSP 1 Score: 348 bits (892), Expect = 5.60e-120
Identity = 173/195 (88.72%), Postives = 179/195 (91.79%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSPLTA----QRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGG 180
           A LIS PS L+     QRNHQP FNF RDQPHSL +DQFFPRDQQQQQQQMMLRR+FDGG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQMMLRRNFDGG 180

Query: 181 TNYDGLLAVNVTVVI 191
           +NYDGLLAVNVT  I
Sbjct: 181 SNYDGLLAVNVTASI 195

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL
Match: A0A5A7TVS1 (LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G001440 PE=3 SV=1)

HSP 1 Score: 343 bits (880), Expect = 3.91e-118
Identity = 173/196 (88.27%), Postives = 179/196 (91.33%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSPLTA----QRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQ-MMLRRSFDG 180
           A LIS PS L+     QRNHQP FNF RDQPHSL +DQFFPRDQQQQQQQ MMLRR+FDG
Sbjct: 121 ATLISPPSALSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQQQQQQMMLRRNFDG 180

Query: 181 GTNYDGLLAVNVTVVI 191
           G+NYDGLLAVNVT  I
Sbjct: 181 GSNYDGLLAVNVTASI 196

[Close]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL
Match: A0A0A0LML7 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV=1)

HSP 1 Score: 337 bits (865), Expect = 6.79e-116
Identity = 170/195 (87.18%), Postives = 176/195 (90.26%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+SSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH
Sbjct: 1   MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLT AKSELSKY+ LGIGN 
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNH 120

Query: 121 AALISSPSPLTA----QRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGG 180
           A LIS PS L+     QRNHQP FNF RDQPHSL +DQFFPRDQQQ Q  MMLRR+FDGG
Sbjct: 121 ATLISPPSTLSTVPHGQRNHQPAFNFARDQPHSLYHDQFFPRDQQQPQ--MMLRRNFDGG 180

Query: 181 TNYDGLLAVNVTVVI 191
           +NYDGLLAVNVT  I
Sbjct: 181 SNYDGLLAVNVTASI 193

[Close]

BLAST of Cp4.1LG11g06540 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.8e-60
Identity = 128/186 (68.82%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AA   S            T    RD  H   + QFFPR      +QM        G NYD
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPR------EQMFGGLDVPAGNNYD 175

Query: 181 -GLLAV 186
            G+LA+
Sbjct: 181 GGILAI 175

[Close]

BLAST of Cp4.1LG11g06540 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.8e-60
Identity = 128/186 (68.82%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AA   S            T    RD  H   + QFFPR      +QM        G NYD
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPR------EQMFGGLDVPAGNNYD 175

Query: 181 -GLLAV 186
            G+LA+
Sbjct: 181 GGILAI 175

[Close]

BLAST of Cp4.1LG11g06540 vs. TAIR 10
Match: AT1G65620.3 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.8e-60
Identity = 128/186 (68.82%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AA   S            T    RD  H   + QFFPR      +QM        G NYD
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPR------EQMFGGLDVPAGNNYD 175

Query: 181 -GLLAV 186
            G+LA+
Sbjct: 181 GGILAI 175

[Close]

BLAST of Cp4.1LG11g06540 vs. TAIR 10
Match: AT1G65620.4 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 228.8 bits (582), Expect = 3.8e-60
Identity = 128/186 (68.82%), Postives = 139/186 (74.73%), Query Frame = 0


Query: 1   MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPH 60
           MAS+S+NSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHP 
Sbjct: 1   MASSSTNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPS 60

Query: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKYKTLGIGNP 120
           QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQL +LQ+DL+ AKSELSKY++LGI   
Sbjct: 61  QREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGI--L 120

Query: 121 AALISSPSPLTAQRNHQPTFNFGRDQPHSLCYDQFFPRDQQQQQQQMMLRRSFDGGTNYD 180
           AA   S            T    RD  H   + QFFPR      +QM        G NYD
Sbjct: 121 AATHQSLGINLLAGAADGTATAVRDHYH---HHQFFPR------EQMFGGLDVPAGNNYD 175

Query: 181 -GLLAV 186
            G+LA+
Sbjct: 181 GGILAI 175

[Close]

BLAST of Cp4.1LG11g06540 vs. TAIR 10
Match: AT5G63090.2 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 184.9 bits (468), Expect = 6.3e-47
Identity = 90/138 (65.22%), Postives = 107/138 (77.54%), Query Frame = 0


Query: 2   ASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQ 61
           +S S NSPCAACKFLRRKC P C+FAPYFPP++P KFANVHK+FGASNVTKLLNEL PHQ
Sbjct: 4   SSNSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQ 63

Query: 62  REDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTSAKSELSKY----KTLGI 121
           REDAVNSLAYEA+ R+RDPVYGCVG IS LQ Q+ +LQ +L +A ++L+ Y       G 
Sbjct: 64  REDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTSAAGA 123

Query: 122 -GNPAALISSPSPLTAQR 135
            GN   L+  P PL +Q+
Sbjct: 124 PGNVVDLVFQPQPLPSQQ 141

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g06540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04479	5.3e-59	68.82	Protein ASYMMETRIC LEAVES 2 OS=Arabidopsis thaliana OX=3702 GN=AS2 PE=1 SV=1	[more]
Q32SG3	4.5e-50	59.12	LOB domain-containing protein 6 OS=Zea mays OX=4577 GN=LBD6 PE=1 SV=1	[more]
A1YKY7	1.5e-48	56.68	Protein IAL1 OS=Zea mays OX=4577 PE=2 SV=1	[more]
A2WXT0	2.5e-48	73.60	LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 P...	[more]
Q8LQH4	2.5e-48	73.60	LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6...	[more]

BLAST of Cp4.1LG11g06540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546811.1	1.32e-135	100.00	LOB domain-containing protein 6 [Cucurbita pepo subsp. pepo] >XP_023546812.1 LOB...	[more]
XP_022929710.1	2.94e-133	97.93	LOB domain-containing protein 6 [Cucurbita moschata] >XP_022929711.1 LOB domain-...	[more]
KAG6598922.1	6.37e-133	96.92	Protein ASYMMETRIC LEAVES 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7029877.1	9.38e-133	96.43	LOB domain-containing protein 6, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_022996817.1	9.49e-132	97.40	LOB domain-containing protein 6 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g06540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EV32	1.42e-133	97.93	LOB domain-containing protein 6 OS=Cucurbita moschata OX=3662 GN=LOC111436210 PE...	[more]
A0A6J1K327	4.59e-132	97.40	LOB domain-containing protein 6 OS=Cucurbita maxima OX=3661 GN=LOC111491944 PE=3...	[more]
A0A1S3B5A0	5.60e-120	88.72	LOB domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103485916 PE=3 SV=...	[more]
A0A5A7TVS1	3.91e-118	88.27	LOB domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A0A0LML7	6.79e-116	87.18	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G070920 PE=3 SV...	[more]

BLAST of Cp4.1LG11g06540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65620.1	3.8e-60	68.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.2	3.8e-60	68.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.3	3.8e-60	68.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G65620.4	3.8e-60	68.82	Lateral organ boundaries (LOB) domain family protein	[more]
AT5G63090.2	6.3e-47	65.22	Lateral organ boundaries (LOB) domain family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 9..106 e-value: 1.4E-43 score: 147.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 8..109 score: 27.276331
None	No IPR available	PANTHER	PTHR31301:SF76	LOB DOMAIN-CONTAINING PROTEIN 6-LIKE	coord: 2..181
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 2..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g06540.1	Cp4.1LG11g06540.1	mRNA