Cp4.1LG11g06390 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g06390
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Syntaxin-6_N domain-containing protein
Location	Cp4.1LG11: 4158474 .. 4160331 (-)
RNA-Seq Expression	Cp4.1LG11g06390
Synteny	Cp4.1LG11g06390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATTATTTATTTATTTATAAATCTCAGTCTTTTTCTCCTAATTATTAGCTTCTGAAAAGAAGGTGGGGAATTGTGCAAGAAAGAATCGGACAACAAAGAGAGCTTCATCTCTGTCTCATTTCTGTGTGAGCTGTGTGTCCCCTTGTATTCATCTCTGTTCTTGCTTCTCTCAACCACCCATCACAGGAATTGCTCAAACAATCCAACCCTTTAGCTCCCCGCCACCAACATTTGATTTCCCGATTTTGATCTTTGATTTCTTAACCCTTTTCTTTCTTATTTCATCGTCTTTGCTCTGTTTTTTCTACCCCTCCGGTTTGCCCTCTTATCCCTCGATGTTAGTTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACGTACGTCTTTTACTCTTTGTTTGATTTGGGGATTTTCCCCTTCCTGTTCTTTCTCTCGATGTTTAATTGAATTCTGTTTTGATTTGTTGTGGAGGATGTTTTGTTCTAATGATTTGGTGTTCTGGGTTCGTTTTATTTGAGTCTGGAATGATCTGTTTATGATGATTCATTTTAATCTTAGTTTCTTATTCTATGTCTAAGTTGAATGAGTTTCTACTATAGTGATGGTTCAAGAACCTGAATTTTATCTGCCCTGGATTCTACAAGTTTGTGTGCTTACTGGGTTTAGAGGGATTCTACAAGTTTCTCCTAAATTGATACTCATATTGGTTTATGATTTCAGAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGGTAGGATACTGAATTTAACCAAATTATGCCATCAAAATATCATAATGGAATGGTAATTAGGATACTTTGATGATAAGCCTGATGTTTAAGAACAGTGACAACTGACCATTAATCTTGTTTGCTAGTTAAGCTATGATTATACATGGACTTATATGAACCTATGGCTCTACTTTTATAAATCATAGTAACAAGTGTTATTTTTTTCGGTCGATAATTAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCACTTCGATGGGTGAATTTAAACGAGGAAGAATGCGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTGTGTGTTGTTCTTCAGTAAATGAGGAAGAATGCGACGATTTGGCTACATTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTGATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGGTGAGCATGGCAGGGAACACGAATACCATATATTTTGTTCGGTGTAATTGTGCTCTTATGCGTTCCGAACGAAATGTAACTGTAACTGACCGTTTTTTCTATCAGTTCTTTGGTAGGGTTCAGCAGAGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGGTGAGTTTCTAATTTTCTCGAGGATGTGCGGCGTTCGA

mRNA sequence

ATGATTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCACTTCGATGGGTGAATTTAAACGAGGAAGAATGCGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTGTGTGTTGTTCTTCAGTAAATGAGGAAGAATGCGACGATTTGGCTACATTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTGATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGGTGAGCATGGCAGGGAACACGAATACCATATATTTTGTTCGGTGTAATTGTGCTCTTATGCGTTCCGAACGAAATGTAACTGTAACTGACCGTTTTTTCTATCAGTTCTTTGGTAGGGTTCAGCAGAGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGGTGAGTTTCTAATTTTCTCGAGGATGTGCGGCGTTCGA

Coding sequence (CDS)

ATGATTGCAAATAGTTTCGATTTGTGGAAGAAGGATGGGTTCTTTTCTGCCGCCGAGCAGGTCCAAGAATCTGCCGATACAATGGAGTTTGCATATAGGACATGGGTTAGAGAGATAAGAGAAGGGCTAAGTCCTGATGATTTGGATGAACTTCGACGCGAGGTACAAACAGCTCTTGGCACAGCCAAATGGCAGCTGGAAGAGTTTGAGAAAGCTGTTAGAGTTAGCTATCGTGCTCGAAGTGAAGAACATTTGTTGGAAAGACATAGGCTATTTATTGCAGCCATTGGAAATCAAATTTCTCATATTGAAGCTGCTTTAAGAGAATCTTATGACAAAGAGGGCAAGAAGCCACTTCGATGGGTGAATTTAAACGAGGAAGAATGCGACGATTTGGCTACGTTTCTCTCTGGCACATGCCAAGTACCACGAAGCGCAAAAACTGAATCATCTGTGTGTTGTTCTTCAGTAAATGAGGAAGAATGCGACGATTTGGCTACATTTAGAAGAGTGGATGATGGACTATGCAAAATGGATAGATCAACAAAGGCAAGGAGAGCGAGCTCGCCAAGCGCTCCTGATCTGCAAATTGTAATTGTGGATGAAAATCGAGAGAGAAAACAGTCTATTACGAGTTTAGAAGTTTCAAGAAAAGGAAAATCAGGATCAGTCTTCTGGAAGCTTGGATGTCAAAAATTTTCTCAGGTGAGCATGGCAGGGAACACGAATACCATATATTTTGTTCGGTGTAATTGTGCTCTTATGCGTTCCGAACGAAATGTAACTGTAACTGACCGTTTTTTCTATCAGTTCTTTGGTAGGGTTCAGCAGAGGCAAATATACAGACCTTGGCATCTTCAGCTTGCATGTTCTGTTCAATTTACTCTGGCTTTGATGTTGACTATATTCTTGATCGGTGAGTTTCTAATTTTCTCGAGGATGTGCGGCGTTCGA

Protein sequence

MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALGTAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLRWVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDRSTKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIGEFLIFSRMCGVR

Homology

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BLAST of Cp4.1LG11g06390 vs. NCBI nr
Match: XP_023545458.1 (uncharacterized protein LOC111804881 [Cucurbita pepo subsp. pepo] >XP_023545539.1 uncharacterized protein LOC111804937 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 515 bits (1327), Expect = 6.94e-183
Identity = 269/312 (86.22%), Postives = 273/312 (87.50%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR
Sbjct: 62  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 180
           WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR
Sbjct: 122 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 181

Query: 181 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAG 240
           STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ     
Sbjct: 182 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ----- 241

Query: 241 NTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALML 300
                                         FFGRVQQRQIYRPWHLQLACSVQFTLALML
Sbjct: 242 ------------------------------FFGRVQQRQIYRPWHLQLACSVQFTLALML 278

Query: 301 TIFLIGEFLIFS 312
           TIFLI   + +S
Sbjct: 302 TIFLIVPIVFYS 278

[Close]

BLAST of Cp4.1LG11g06390 vs. NCBI nr
Match: XP_022929665.1 (uncharacterized protein LOC111436178 [Cucurbita moschata])

HSP 1 Score: 513 bits (1321), Expect = 5.70e-182
Identity = 267/312 (85.58%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR
Sbjct: 62  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 180
           WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS NEEECDDLATFRRVDDGLCKMDR
Sbjct: 122 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSANEEECDDLATFRRVDDGLCKMDR 181

Query: 181 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAG 240
           STKARRASSPSAPD+QIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ     
Sbjct: 182 STKARRASSPSAPDIQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ----- 241

Query: 241 NTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALML 300
                                         FFGRVQQRQIYRPWHLQLACSVQFTLALML
Sbjct: 242 ------------------------------FFGRVQQRQIYRPWHLQLACSVQFTLALML 278

Query: 301 TIFLIGEFLIFS 312
           TIFLI   + +S
Sbjct: 302 TIFLIVPIVFYS 278

[Close]

BLAST of Cp4.1LG11g06390 vs. NCBI nr
Match: KAG7029807.1 (hypothetical protein SDJN02_08150, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 504 bits (1297), Expect = 7.24e-177
Identity = 263/312 (84.29%), Postives = 270/312 (86.54%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG
Sbjct: 94  LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 153

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR
Sbjct: 154 TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 213

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 180
           WVNLNEEECDDLATFLSGTCQVPRSAKTESS+CCSS NEEEC+DLAT RRVDDGLCKMDR
Sbjct: 214 WVNLNEEECDDLATFLSGTCQVPRSAKTESSLCCSSANEEECNDLATLRRVDDGLCKMDR 273

Query: 181 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAG 240
           STKARRASSPSAP+LQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ     
Sbjct: 274 STKARRASSPSAPNLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ----- 333

Query: 241 NTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALML 300
                                         FFGRVQQ QIYRPWHLQLACSVQFTLALML
Sbjct: 334 ------------------------------FFGRVQQGQIYRPWHLQLACSVQFTLALML 370

Query: 301 TIFLIGEFLIFS 312
           TIFLI   + +S
Sbjct: 394 TIFLIVPIVFYS 370

[Close]

BLAST of Cp4.1LG11g06390 vs. NCBI nr
Match: KAG6598866.1 (hypothetical protein SDJN03_08644, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434 bits (1117), Expect = 2.41e-151
Identity = 237/312 (75.96%), Postives = 241/312 (77.24%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR
Sbjct: 62  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 180
           WVNLNEEE                             NEEECDDLAT RRVDDGLCKMDR
Sbjct: 122 WVNLNEEES----------------------------NEEECDDLATLRRVDDGLCKMDR 181

Query: 181 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAG 240
           STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKF Q     
Sbjct: 182 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFPQ----- 241

Query: 241 NTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALML 300
                                         FFGRVQQ QIYRPWHLQLACSVQFTLALML
Sbjct: 242 ------------------------------FFGRVQQGQIYRPWHLQLACSVQFTLALML 250

Query: 301 TIFLIGEFLIFS 312
           TIFLI   + +S
Sbjct: 302 TIFLIVPIVFYS 250

[Close]

BLAST of Cp4.1LG11g06390 vs. NCBI nr
Match: XP_038891183.1 (uncharacterized protein LOC120080557 [Benincasa hispida])

HSP 1 Score: 427 bits (1098), Expect = 2.37e-147
Identity = 238/355 (67.04%), Postives = 256/355 (72.11%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTW+RE REG+SPDDLDELRREVQ ALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIREKREGISPDDLDELRREVQMALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEF KAVRVSYR+R+EEHLLERH LFIAAIGNQISH+EAALR+SYDKEGK+PLR
Sbjct: 62  TAKWQLEEFTKAVRVSYRSRNEEHLLERHGLFIAAIGNQISHVEAALRKSYDKEGKQPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVC------------------------CSS 180
           WVNLNEEECDDLATFLSG  QVP+SAKTESSVC                        CSS
Sbjct: 122 WVNLNEEECDDLATFLSGISQVPQSAKTESSVCRSSAKNSIYENHERVVADMKLTSTCSS 181

Query: 181 VNE----------------EECDDLA---TFRRVDDGLCKMDRSTKARRASSPSAPDLQI 240
            N                 ++  DL    +FRRVDD LCKMDRSTKARRAS P+APDLQI
Sbjct: 182 SNSSKMKGTEYANAVDIDSQKVKDLEVKESFRRVDDALCKMDRSTKARRASPPTAPDLQI 241

Query: 241 VIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCALMRS 300
           VIVDEN+ERKQSITSLEVSRKGKSGSVFWK GC  FSQ+                     
Sbjct: 242 VIVDENQERKQSITSLEVSRKGKSGSVFWKRGCGNFSQL--------------------- 301

Query: 301 ERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIGEFLIFS 312
                         FGRVQQRQIYRPWHLQL CSVQFTLALMLTIFLI   + +S
Sbjct: 302 --------------FGRVQQRQIYRPWHLQLTCSVQFTLALMLTIFLIVPIVFYS 321

[Close]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL
Match: A0A6J1EUZ9 (uncharacterized protein LOC111436178 OS=Cucurbita moschata OX=3662 GN=LOC111436178 PE=4 SV=1)

HSP 1 Score: 513 bits (1321), Expect = 2.76e-182
Identity = 267/312 (85.58%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR
Sbjct: 62  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLCKMDR 180
           WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS NEEECDDLATFRRVDDGLCKMDR
Sbjct: 122 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSANEEECDDLATFRRVDDGLCKMDR 181

Query: 181 STKARRASSPSAPDLQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAG 240
           STKARRASSPSAPD+QIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ     
Sbjct: 182 STKARRASSPSAPDIQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQ----- 241

Query: 241 NTNTIYFVRCNCALMRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALML 300
                                         FFGRVQQRQIYRPWHLQLACSVQFTLALML
Sbjct: 242 ------------------------------FFGRVQQRQIYRPWHLQLACSVQFTLALML 278

Query: 301 TIFLIGEFLIFS 312
           TIFLI   + +S
Sbjct: 302 TIFLIVPIVFYS 278

[Close]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL
Match: A0A0A0LMD6 (Syntaxin-6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G058690 PE=4 SV=1)

HSP 1 Score: 426 bits (1095), Expect = 3.28e-147
Identity = 235/355 (66.20%), Postives = 254/355 (71.55%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTW+RE REGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRVSYR+RSEEHLLERHRLFIAAIGNQISH+EAALR+SYDKEG++PLR
Sbjct: 62  TAKWQLEEFEKAVRVSYRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS------------------------ 180
           WVNLNEEEC+DLATFLSG  +VP+SAKTESSVC SS                        
Sbjct: 122 WVNLNEEECNDLATFLSGVSEVPQSAKTESSVCRSSAKSSIYENHERVVADMNPTSTCSL 181

Query: 181 ----------------VNEEECDDLA---TFRRVDDGLCKMDRSTKARRASSPSAPDLQI 240
                           ++  +  DL    +FRRVDD LCKMDRSTK RRAS P+ PDLQI
Sbjct: 182 SNSSKMKGNKYVDAVDIDSPKVKDLEVKESFRRVDDALCKMDRSTKVRRASPPTVPDLQI 241

Query: 241 VIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCALMRS 300
           VIVDEN+ERKQSITSLE SRKGKS SVFWK GC  FSQ                      
Sbjct: 242 VIVDENQERKQSITSLEASRKGKSASVFWKRGCGNFSQ---------------------- 301

Query: 301 ERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIGEFLIFS 312
                        FFGRVQQRQIYRPWHLQL CSVQFTLALMLTIFLI   + +S
Sbjct: 302 -------------FFGRVQQRQIYRPWHLQLTCSVQFTLALMLTIFLIVPIVFYS 321

[Close]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL
Match: A0A1S3BS56 (uncharacterized protein LOC103492935 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1)

HSP 1 Score: 421 bits (1083), Expect = 2.27e-145
Identity = 232/349 (66.48%), Postives = 252/349 (72.21%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTW+RE REGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFEKAVRV+ R+RSEEHLLERHRLFIAAIGNQISH+EAALR+SYDKEG++PLR
Sbjct: 62  TAKWQLEEFEKAVRVNCRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS------------------------ 180
           WVNLNEEEC+DLATFLSG  +VP+SAKTESS+C SS                        
Sbjct: 122 WVNLNEEECNDLATFLSGVSEVPQSAKTESSLCRSSAKSSIYENHERVVADMNPTSTCSL 181

Query: 181 ----------------VNEEECDDLAT---FRRVDDGLCKMDRSTKARRASSPSAPDLQI 240
                           ++  +  DL     F RVDD LCKMDRSTK RRAS P+ PDLQI
Sbjct: 182 SNSSKMKGNKYVDAVDIDSSKVKDLEVKENFGRVDDALCKMDRSTKVRRASPPTVPDLQI 241

Query: 241 VIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCALMRS 300
           VIVDEN+ERKQSITSLEVSRKGKSG VFWK GC KFSQ+                     
Sbjct: 242 VIVDENQERKQSITSLEVSRKGKSGPVFWKRGCGKFSQL--------------------- 301

Query: 301 ERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIG 306
                         FGRVQQRQ+YRPWHLQLACSVQFTLALMLTIFLIG
Sbjct: 302 --------------FGRVQQRQMYRPWHLQLACSVQFTLALMLTIFLIG 315

[Close]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL
Match: A0A1S4E2P4 (uncharacterized protein LOC103492935 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1)

HSP 1 Score: 416 bits (1069), Expect = 3.39e-143
Identity = 232/352 (65.91%), Postives = 252/352 (71.59%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTW+RE REGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQ---LEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKK 120
           TAKWQ   LEEFEKAVRV+ R+RSEEHLLERHRLFIAAIGNQISH+EAALR+SYDKEG++
Sbjct: 62  TAKWQVGYLEEFEKAVRVNCRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQ 121

Query: 121 PLRWVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS--------------------- 180
           PLRWVNLNEEEC+DLATFLSG  +VP+SAKTESS+C SS                     
Sbjct: 122 PLRWVNLNEEECNDLATFLSGVSEVPQSAKTESSLCRSSAKSSIYENHERVVADMNPTST 181

Query: 181 -------------------VNEEECDDLAT---FRRVDDGLCKMDRSTKARRASSPSAPD 240
                              ++  +  DL     F RVDD LCKMDRSTK RRAS P+ PD
Sbjct: 182 CSLSNSSKMKGNKYVDAVDIDSSKVKDLEVKENFGRVDDALCKMDRSTKVRRASPPTVPD 241

Query: 241 LQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCAL 300
           LQIVIVDEN+ERKQSITSLEVSRKGKSG VFWK GC KFSQ+                  
Sbjct: 242 LQIVIVDENQERKQSITSLEVSRKGKSGPVFWKRGCGKFSQL------------------ 301

Query: 301 MRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIG 306
                            FGRVQQRQ+YRPWHLQLACSVQFTLALMLTIFLIG
Sbjct: 302 -----------------FGRVQQRQMYRPWHLQLACSVQFTLALMLTIFLIG 318

[Close]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL
Match: A0A1S4E2P6 (uncharacterized protein LOC103492935 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492935 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 1.33e-142
Identity = 232/358 (64.80%), Postives = 254/358 (70.95%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           ++ANSFDLWKKDGFFSAAEQVQESADTMEFAYRTW+RE REGLSPDDLDELRREVQTALG
Sbjct: 2   LVANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWIRERREGLSPDDLDELRREVQTALG 61

Query: 61  TAKWQ---LEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKK 120
           TAKWQ   LEEFEKAVRV+ R+RSEEHLLERHRLFIAAIGNQISH+EAALR+SYDKEG++
Sbjct: 62  TAKWQVGYLEEFEKAVRVNCRSRSEEHLLERHRLFIAAIGNQISHVEAALRKSYDKEGRQ 121

Query: 121 PLRWVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSS--------------------- 180
           PLRWVNLNEEEC+DLATFLSG  +VP+SAKTESS+C SS                     
Sbjct: 122 PLRWVNLNEEECNDLATFLSGVSEVPQSAKTESSLCRSSAKSSIYENHERVVADMNPTST 181

Query: 181 -------------------VNEEECDDLAT---FRRVDDGLCKMDRSTKARRASSPSAPD 240
                              ++  +  DL     F RVDD LCKMDRSTK RRAS P+ PD
Sbjct: 182 CSLSNSSKMKGNKYVDAVDIDSSKVKDLEVKENFGRVDDALCKMDRSTKVRRASPPTVPD 241

Query: 241 LQIVIVDENRERKQSITSLEVSRKGKSGSVFWKLGCQKFSQVSMAGNTNTIYFVRCNCAL 300
           LQIVIVDEN+ERKQSITSLEVSRKGKSG VFWK GC KFSQ+                  
Sbjct: 242 LQIVIVDENQERKQSITSLEVSRKGKSGPVFWKRGCGKFSQL------------------ 301

Query: 301 MRSERNVTVTDRFFYQFFGRVQQRQIYRPWHLQLACSVQFTLALMLTIFLIGEFLIFS 312
                            FGRVQQRQ+YRPWHLQLACSVQFTLALMLTIFLI   + +S
Sbjct: 302 -----------------FGRVQQRQMYRPWHLQLACSVQFTLALMLTIFLIVPIVFYS 324

[Close]

BLAST of Cp4.1LG11g06390 vs. TAIR 10
Match: AT4G30240.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 176.0 bits (445), Expect = 4.7e-44
Identity = 105/261 (40.23%), Postives = 151/261 (57.85%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           M+ANSFDLW+KD FFSAAE+VQESAD ME AYR W +E R+G    + DEL +E+Q AL 
Sbjct: 2   MVANSFDLWQKDVFFSAAEEVQESADIMESAYRLWFKEKRDGRVSVESDELCKELQAALS 61

Query: 61  TAKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLR 120
           TAKWQLEEFE+AV +S+    ++  L RH+ F+ AI NQI  +E+ L ES  + GK+PLR
Sbjct: 62  TAKWQLEEFERAVSLSHGNCRDDTTLTRHKQFVTAIENQIYQVESTLLESLSENGKQPLR 121

Query: 121 WVNLNEEECDDLATFLSGTCQVPRSAKTESSVCCSSVNEEECDDLATFRRVDDGLC---- 180
           WV+LN+EE DDLA FLSG+ Q   S  ++S     S      ++        +G C    
Sbjct: 122 WVDLNKEERDDLAMFLSGSSQTSESLNSDSINLRDSSTSSVAENPRGINGRREGRCYGDS 181

Query: 181 --------------KMDRSTKARRA-SSPSAPDLQIVIVD-----ENRERKQSITSLEVS 237
                           D+    RR  SSP+ P++  + ++     +  ER++ ++ +E +
Sbjct: 182 PDCVIDIDDIGSPESADKKGGTRRTWSSPNVPNISALRINVPVNAKEEEREKFLSHIEDT 241

[Close]

BLAST of Cp4.1LG11g06390 vs. TAIR 10
Match: AT2G18860.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 172.6 bits (436), Expect = 5.2e-43
Identity = 112/253 (44.27%), Postives = 151/253 (59.68%), Query Frame = 0


Query: 1   MIANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALG 60
           M+ NSFDLW+KD FFSAAE+VQ+S D ME AYR W+RE +        DE+ +E+Q ALG
Sbjct: 2   MVVNSFDLWQKDVFFSAAEEVQKSTDIMESAYRLWIREKK--------DEICKELQAALG 61

Query: 61  TAKWQLEEFEKAVRVSY-RARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPL 120
           TAKWQLEEFEKAVR+S+ R    +    RH+ F+ AI NQI  +E +L+E+Y + GKKPL
Sbjct: 62  TAKWQLEEFEKAVRLSHKRCGDNDSSSTRHKQFVTAIENQIHRVETSLQEAYSENGKKPL 121

Query: 121 RWVNLNEEECDDLATFLSGTCQVPRSAKTESSV-----CCSSV--NEEECDDLATFRRV- 180
           RWV+LNEEE DDLA FLSG+ +  +S   ESS+       SS+  N  E     TF++  
Sbjct: 122 RWVDLNEEERDDLAMFLSGSSRTSQSFSGESSIKSRESTNSSLVENVMEVSAKVTFKKAK 181

Query: 181 ---DDGLCKMD-----------RSTKARRA-SSPSAPDLQIVIV--DENRERKQSITSLE 227
              D   C +D           +S   RR  SSP+   L+I++   D   E++  +  +E
Sbjct: 182 VYGDGSECVIDIEERVTPGQAEKSVGLRRIWSSPNFNSLRIIVPGGDNEEEKETLVAQIE 241

[Close]

BLAST of Cp4.1LG11g06390 vs. TAIR 10
Match: AT1G27700.1 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-30
Identity = 73/184 (39.67%), Postives = 109/184 (59.24%), Query Frame = 0


Query: 2   IANSFDLWKKDGFFSAAEQVQESADTMEFAYRTWVREIREGLSPDDLDELRREVQTALGT 61
           +  S D W+KD FF AAE+VQESAD ME AYRTW+   R+     D ++L R++  ALGT
Sbjct: 1   MTTSLDRWEKDPFFPAAEEVQESADRMESAYRTWLNGKRDSSKVWDSEQLHRDLHAALGT 60

Query: 62  AKWQLEEFEKAVRVSYRARSEEHLLERHRLFIAAIGNQISHIEAALRESYDKEGKKPLRW 121
            KWQL+EF+KAV+ SY  R  +   +RHR F   +  Q+S IE +L+E+   +GK   RW
Sbjct: 61  TKWQLDEFQKAVKSSYDNRLSDETRDRHREFTFVMEAQVSKIEKSLKEAAQSDGKGTPRW 120

Query: 122 VNLNEEECDDLATFLSGTCQVPRS-----AKTESSVCCSSVNEEECDDLATFRRVDDGLC 181
           V L+E++ ++LA FL+G  +  ++      +T S+   S+ N    DD    +  D+ + 
Sbjct: 121 VRLDEDDRNELALFLTGPSESAKANPNGHRRTASAAEFSAWNIAVSDDGLVKKSCDEPVV 180

[Close]

BLAST of Cp4.1LG11g06390 vs. TAIR 10
Match: AT2G18860.2 (Syntaxin/t-SNARE family protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.5e-29
Identity = 87/217 (40.09%), Postives = 121/217 (55.76%), Query Frame = 0


Query: 28  MEFAYRTWVREIREGLSPDDLDELRREVQTALGTAKWQLEEFEKAVRVSY-RARSEEHLL 87
           ME AYR W+RE +        DE+ +E+Q ALGTAKWQLEEFEKAVR+S+ R    +   
Sbjct: 10  MESAYRLWIREKK--------DEICKELQAALGTAKWQLEEFEKAVRLSHKRCGDNDSSS 69

Query: 88  ERHRLFIAAIGNQISHIEAALRESYDKEGKKPLRWVNLNEEECDDLATFLSGTCQVPRSA 147
            RH+ F+ AI NQI  +E +L+E+Y + GKKPLRWV+LNEEE DDLA FLSG+ +  +S 
Sbjct: 70  TRHKQFVTAIENQIHRVETSLQEAYSENGKKPLRWVDLNEEERDDLAMFLSGSSRTSQSF 129

Query: 148 KTESSV-----CCSSV--NEEECDDLATFRRV----DDGLCKMD-----------RSTKA 207
             ESS+       SS+  N  E     TF++     D   C +D           +S   
Sbjct: 130 SGESSIKSRESTNSSLVENVMEVSAKVTFKKAKVYGDGSECVIDIEERVTPGQAEKSVGL 189

Query: 208 RRA-SSPSAPDLQIVIVDENRERKQSITSLEVSRKGK 221
           RR  SSP+   L+I++   + E ++     ++    K
Sbjct: 190 RRIWSSPNFNSLRIIVPGGDNEEEKETLVAQIEATPK 218

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g06390 vs.


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG11g06390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023545458.1	6.94e-183	86.22	uncharacterized protein LOC111804881 [Cucurbita pepo subsp. pepo] >XP_023545539....	[more]
XP_022929665.1	5.70e-182	85.58	uncharacterized protein LOC111436178 [Cucurbita moschata]	[more]
KAG7029807.1	7.24e-177	84.29	hypothetical protein SDJN02_08150, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598866.1	2.41e-151	75.96	hypothetical protein SDJN03_08644, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_038891183.1	2.37e-147	67.04	uncharacterized protein LOC120080557 [Benincasa hispida]	[more]

BLAST of Cp4.1LG11g06390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EUZ9	2.76e-182	85.58	uncharacterized protein LOC111436178 OS=Cucurbita moschata OX=3662 GN=LOC1114361...	[more]
A0A0A0LMD6	3.28e-147	66.20	Syntaxin-6_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G05869...	[more]
A0A1S3BS56	2.27e-145	66.48	uncharacterized protein LOC103492935 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E2P4	3.39e-143	65.91	uncharacterized protein LOC103492935 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4E2P6	1.33e-142	64.80	uncharacterized protein LOC103492935 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Cp4.1LG11g06390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30240.1	4.7e-44	40.23	Syntaxin/t-SNARE family protein	[more]
AT2G18860.1	5.2e-43	44.27	Syntaxin/t-SNARE family protein	[more]
AT1G27700.1	3.0e-30	39.67	Syntaxin/t-SNARE family protein	[more]
AT2G18860.2	2.5e-29	40.09	Syntaxin/t-SNARE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.58.90		coord: 10..111 e-value: 1.0E-14 score: 56.4
None	No IPR available	PANTHER	PTHR34949	OS05G0443700 PROTEIN	coord: 1..310
None	No IPR available	PANTHER	PTHR34949:SF3	SYNTAXIN/T-SNARE FAMILY PROTEIN	coord: 1..310
IPR015260	Syntaxin 6, N-terminal	PFAM	PF09177	Syntaxin-6_N	coord: 12..104 e-value: 2.4E-18 score: 66.6
IPR010989	SNARE	SUPERFAMILY	47661	t-snare proteins	coord: 11..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g06390.1	Cp4.1LG11g06390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048193	Golgi vesicle transport
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane