Cp4.1LG11g05580 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g05580
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionpentatricopeptide repeat-containing protein At5g24830-like
LocationCp4.1LG11: 3315928 .. 3323461 (+)
RNA-Seq ExpressionCp4.1LG11g05580
SyntenyCp4.1LG11g05580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGGTGAGTTATCCTCTACCATTCCTTTATCATACGTTTCTTTGATCAGAATTTTTCGTATATGGTGTTCACATGTTCATTTTGGTGGTTCAGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGTAAAACGACTACATATTTCGATCCTTTGGTTTGCTCCGGCTGAAATGAGTGCGAAACTTCATCGACTTTACAGTAATTAGTTGACCTTTTGTCTGTTAGCATTAAGAAATTGAAAGAATTTTAATGAATTTCTTAATGCTTTCTGATTATATACATTACATGCGAAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTGTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGTGATTTTTGCTTTTCTTTAATTATATATGCTTTCACTCTTGTAGTTCGAAATCTCAATACATTATCATCTCTTCATCAACGTGGACGTGCATAGATGAAAGTCATCCTGCTTATTTAATGGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCCCATATCAATTTAAGGAATTTATTAAAATTAATTTTTAGCTAGATTTATAAAATCTATTAATTTTATTTATTTTTGAAGTTGCATTATTTAAAAATAGCTATGTTTAGTGAAAAAAACTGTTAGACGGAACTGTCCACTTTGAACATAAGTTCTCTAGACTTTGATTGTATGATATTGTCCACTTTAAGCCGACTTTGATTTTGGAGAAGTTGTATGATATTGATTTAGGCTTCTCCAAAATGTCTCACACCAATAGAGAGAATTCACCCTCTAGACTTTGATTGTATGATATTGTCCACTTTGAGCCGACTTTAATTTTGGAGAAGTAATGTCTCACACCAATAGAGAGAATTCACCCGATTCCATTACTAGATTAGACGCGATTCCATTCCTAGATTAGGTAGGTGAGACTTTCGTCTTCCAGCAAAACGAGCCTAAGTATTTCGTGTCATGTCGTATAATAAATGCGGAAATTCAAAAAATGTGAGGTGAAAAACGAATAGAAGAAAGGAGGAGACTGCAGTCTGCTTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAATTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCCATATTGCCTAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGGTGAGTTATCCTCTACCATTCCTTTATCATACGTTTCTTTGATCAGAATTTTTCGTATATGGTGTTCACATGTTCATTTTGGTGGTTCAGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGTAAAACGACTACATATTTCGATCCTTTGGTTTGCTCCGTCTGAAATGAGTGCGAAACTTCATCGACTTTACAGTAATTAGTTGACCTTTTGTCTTTTAACATTAAGAAATTGAAAGAATTTTAATGAATTTCTTAATGCTTTCTGATTATATACATTACATGCGAAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGTGATTTTTGCTTATCTTTAATTATATAGGCTTTCACTCTTGTAGTTCGAAATCTCAATACATTATCATCTCTTCATCAATGTGGACGTGCATAGATGAAAGTCATCCTGCTTATTTAATGGATAATATCGGACGAGGTAAATCTTATTTTTTTTTCCTAAGAAACAATTTCATTGATGTATGAAATTACAAAAAAGGATAAATAATCGAGGGTGATTCCAAAAAGCTTGCAATTTGTTAATAGAGTAGCTTAACTATAAGAAGAAAAGATATTTGTAGATTTACACTAAAGAGATAGCATGATAAACAATGGAATCAAAGAACTTGTCAAAAGGAAGCTCTTTATCCAATAAACTCTTTGGTTTCATATTTCCAATGATTCCAAAGAAAATCCCTGATGGTAGATTTTCACAACAAAGCTTTAGCTTCCTTGAAAGGATGATCGGACAAAACTATGGAAAGAAAAGTCTTGATGTCCCAAGGAAGGGTCAGGTGCCAGCCAAAAGGAGAACAAATTCATTTCAAAATTCCTGAGCATATGGGTAAACCTTGTTTAATGCATGGAATCGTTATATCCTTAAAAGATCGTGATAACTATAAAATTTTACTTGCGCTGACTGCAGATAATTTTGATGAGGCTATTTATTCTTAAGTAGCTGTTGGATAATTCTGTGTTAAATGATTAGCAGATGCTATAATTCATGCTATAGCTCACATTTCCTGGGCACAAACCACTGTGTCCTTAAAGAATAAAGGTACTTATGTGAGCTTAGAATCACCTGAGTCTGCTATAGTTAGTTGTAAGTGAACTTTGCTATCGAGCTATAATTCTCACCATCAATTGAAGGTTTGACGAGAGAGAAGGGACACGAAAAATAAGAGTGTCGGGGGGCATTGCCTCAGTAAGGTTTTAGGGAATTTGTGGGAACTAGTGTAAAACTTGGAGTTCTGAAACTTCTGATCTTTTTACTAAAAACTGGGATTCCTCCACGTTTCTTCATTAAGACATCAATGAGTCCTTTCACATCCATCTTTATATTCACTCAAATTAAGTTGATGTACTTCTCCTGCATAGCCCCTTATTGCTTCTTTAGAGTTGAATATTCATTGAGTGCAATGACTTATGATTGTTGGTGTATTATTATTCCTAGTTGTGATGAGGATAAGAAAATTAAAAAATTGGATGGCTGATGTCATTTATTCTTCTTTTCATCTCCCAATTGTTTTTATGCTATTAAATATATCTAATGATCTTATATGCCTTATATGTTTACAAGGTATCATCTTGTAAAAATCTGTTAAATGCCTAAATTTTTGCAGGGAAAGCATATGTTTAGCGAAGTCAGGTCTTCAGAAATGTTTTTGGGAGGCCGTTTAGCAACCTGACTACACTGCCATGGTTGGGGATTTGTGTTTAAAAGGAAAGTTAGGAGCAGCTCTTTTGCTTCGGAGAAAGTTGATAAGACAAGGTTTTGTTGTTGATTTACTCACACACAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATAGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGGGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATAGGAATATGGATAAAGCTCTCGACCTATTTTATACCATGGCTAATAGTGGTATTAAGCCAAGTAGAATTACCTATAACATACTTTTACATGCATTATGCAAGAGAGGCATCCTGGAGGATGCTCGGAAGCTTCTTGAAGATGTCCTTGATGATGATATTAAAACAACAGTTGATGCAATCACATCAACTATATTAATGGATGGTTACTTTAAAGGTGGAGATATGGTTCAGGCTATTGCTTTATGGTCTGAGATGGTTGAAAAGAAGACAGAGATTGATGTCGTTGCATACAACGTCCTTATTCACGGGCTTTGTTTGAATCAAGATAAGAAAATTGCATTTGGCTGTGTTGTTGATATGATCAAGAGGGGTTTTATTCCGGATATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGATGAGGTTTACTATATCCATGATGTCATGTCACGAATGGGTGTTTCTCCAGATCATATTTCATACAAAATGATTATTCAAGGTCTATGTATTCGTGGAGATGCTATCAAAGCTAATGAGTTTCTTCATTCAATGTTAGAGAAATCGATGGTGCCTGAGCCTCGTATCTGGAACCTGATAATCGATTGTTATGGAAGGTATGGAGATCTGAGCAATGCAATCTCCATCAGGGATCAGATGTTGGCCACCGGCGTGCTACCAAATGTATTTACTTACAATGCGTTGATTCACGCACAAGTTAAAGGAGGGAACATATTCAATGCTTATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCATTTTCCAGACGTTGTTACTTATAATTTATTGATAAGTGGTGCCTGTAAGTGTGGACAAATTCGTTTTGCCCTTCAATTATATGATGAAATGCTGAGGAAGGGGTACGAACCAGATAAGATAACCTACACAGAACTAATAAGAGGTCACTGTATATGTGGTGACATGAAGGAGGCAGAAGATCTATTTATGAAGTTACATAGATCTGGGTTGCCAATGGATATTGTCCCATTTAAAATTATTTTTGAAAAGTACCATAGAATAGGGGAGTCTGAAATGGCATTTAAATTTTATCAAAGGTGGTTGACAATGATGGCATGAGTAGCTGTTTAACAAAATAAATTGTTCCAGGTTACAGCACTAATGTTGCCATTTTGGCTCACAATCACAGGAGATCTGTGAGATCCCACATTGGTTGGAGAGAGGAACGAAATATTCTTTATAATGGTGTAGAAACCTCTCCCTAGCAGACGTGAGGGGAAGCCCGAATGGAAAGGTCGATTGAGGACAATATCTGCTAGCAGTGAGTTTGGGTTGAAACATTCTTTATAATGGTGTAGAAACCTCTTCCTAGCAGACGTGAAGGGAAGCCCGAATGGAAAGGTCGATTGAGGACAATATCTGCTAGCAGTGAACTTGGGTTGTTACAGAATTGGCGTACAGATCTCTTTTACTGACCAAGTATAATTCGGCCTTCTGTTTGTGGACATTTCTGATGGGTAATGTGCTCCTCCTTAGAGGTATGTGTCCATGCTTATGCTTTATTTCTTAATCTGTTGTTGTCTTTTCACTGTGCATAACATTCTCATGATTCCAATATTCGTTCACAGCTGAATATCAAAGCCTTAATAGCATTAGTCTCTTGTCATAAACTTTCTTCTTTACACATGATGCAATATTACAAACGTTCGAGGTTTATATAATAACATCCTCGGGATCGTTTCTTCTACCACTGTTTCACTGGTTTCAGAACTATATTATGGAGGACAGTTTCAGACACAAAAACCAATTCTGATTTATCATTGTAACTTTTTTCTCTGATTTTTGAAGCAGCTGGTGCAAAAGTTCCAATACCGCGAGCATCTAAACGAGTAACCAATTCAGAAGGTGTTTTGGGGATGAACTGAGCTGTTTGTGTTATTAATGGATTTATGCAGCTGATGAGATGAGAATTGAAACTGTGGCACGAGTCTACTCCTGGCCGAAGTGTGTAGCCCGGCTCCATAACGAGGATGCAGCTGAGATTGTGATTGGAGGAGTTTAAGGTGCAGCCTAACTTGACCCATAGTTGAATGCAGTAACTTTCATTTGTATGATGCAAAGTGGTTGGAGTTACTTGTGATGTCATGGTTAAGATCCTCGCCTTATCGAACTGCTGAGCATCTTGACGTGCAGATGTTTTGTCAGTGAAGTTAGCGATGAACGGTGACGGTGAAGAGCGAACAAACTCCATTTTCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGTCATTGTACAGTTCATAATTGAATACAGTAACTTTCATTTGTATGATGCAAAGTGTCATGACGTCGTGGTTAAGATCCTCACCTTATCGAACTGCCGAGCATCTTGACGTGCAGATCTTTTGTCAGTGAAGTTAGCGATGAACGACGACGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGCCAAAGTAGTCATTATACAGTTCAGGTGGAGTTATTGTGACGTTGTGGTTAAGCTCCTCACCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGTTAGCGATGAACACGGCGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGCCATTGTACANACGGTGAAGAGGAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGTCATTGTACAGTTCATAATTGAATACAGTAACTTTCATTTGTATGATGCAAAGTGTCATGACGTCGTGGTTAAGATCCTCACCTTATCGAACTGCCGAGCATCTTGACGTGCAGATCTTTTGTCAGTGAAGTTAGCGATGAACGACGACGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGCCAAAGTAGTCATTATACAGTTCAGGTGGAGTTATTGTGACGTTGTGGTTAAGCTCCTCACCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGTTAGCGATGAACACGGCGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGCCATTGTACAGTTCATATGGCTTACACTGTGATTGATCTAATAGGGGGCCATCTAGCGGTACATTTTCCAGTACCCTTGGTGTATTCTATCCAAACCAGGAACCAGGAACCAGGAACACTGGCAATGCTACTGACAGACCTGTGGGTTGAGTAACAGTGCTTATGCTAATTACTTTGCAGGGCTGATCAAGTGACTAAAGTTAACCAAGCAGTGGTGTGTCGGTGAAAGACAGTATGTTTGCCTCTCAATAATGGAGTCGACTTGTTCTTTTCCTCGGTCCGACCTACCTTCTAGTCTCGTTCCAACCGAAGAAATCGAGAAAAGAAGACTACATTTAATTACTTATGTACAAGTTTTTTCGTACTTGGATCAGATGGAGTGGGTAGACATGAAACTCTGGAAACAAGGGTAAATATCGACCCTAGGCAATAGGACAACATATCGGAAATGGTCGAAATAGCCCAGTTAGTAAAACGTAGAACTGAAAATCCTCGTGTCACTGGTTCATAGCGGTGACCCATATTGTGCAATGGCTCATGCTGTTTCCCCAGAACGTGGAGCCAAAATCAGTTTCACTTTTTAAATTGCCTTTTTAAATGAACCTTTATATAAACTGTGAGTGCCTCCCCTGTTTACTGTACAGGGATTCGAACCTCCCATTTTAAGTGTGGTGTCTTAATCGCTAAGCAAT

mRNA sequence

TGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTGTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGAAGAAAGGAGGAGACTGCAGTCTGCTTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAATTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCCATATTGCCTAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGGAAAGCATATGTTTAGCGAAGTCAGGTCTTCAGAAATGTTTTTGGGAGGCCGTTTAGCAACCTGACTACACTGCCATGGTTGGGGATTTGTGTTTAAAAGGAAAGTTAGGAGCAGCTCTTTTGCTTCGGAGAAAGTTGATAAGACAAGGTTTTGTTGTTGATTTACTCACACACAATTATCTTCTTAATGGACTGTGTATAAACTGTGATATGGAGATAGCAGATTCTCTTTTTAGGGAAATGTTAGAAAGGGGTCCTTCTCCCAGTTGTGCCACATACAACATTATTATTAAGGGTTTCTGCCTTCATAGGAATATGGATAAAGCTCTCGACCTATTTTATACCATGGCTAATAGTGGTATTAAGCCAAGTAGAATTACCTATAACATACTTTTACATGCATTATGCAAGAGAGGCATCCTGGAGGATGCTCGGAAGCTTCTTGAAGATGTCCTTGATGATGATATTAAAACAACAGTTGATGCAATCACATCAACTATATTAATGGATGGTTACTTTAAAGGTGGAGATATGGTTCAGGCTATTGCTTTATGGTCTGAGATGGTTGAAAAGAAGACAGAGATTGATGTCGTTGCATACAACGTCCTTATTCACGGGCTTTGTTTGAATCAAGATAAGAAAATTGCATTTGGCTGTGTTGTTGATATGATCAAGAGGGGTTTTATTCCGGATATCTTTACATACAACACTCTAATCAGTGATCTTTGTAAAGAGGGCCAATTTGATGAGGTTTACTATATCCATGATGTCATGTCACGAATGGGTGTTTCTCCAGATCATATTTCATACAAAATGATTATTCAAGGTCTATGTATTCGTGGAGATGCTATCAAAGCTAATGAGTTTCTTCATTCAATGTTAGAGAAATCGATGGTGCCTGAGCCTCGTATCTGGAACCTGATAATCGATTGTTATGGAAGGTATGGAGATCTGAGCAATGCAATCTCCATCAGGGATCAGATGTTGGCCACCGGCGTGCTACCAAATGTATTTACTTACAATGCGTTGATTCACGCACAAGTTAAAGGAGGGAACATATTCAATGCTTATTCTCTGAAAAAGGATATGCTTTTGTTAGGTCATTTTCCAGACGTTGTTACTTATAATTTATTGATAAGTGGTGCCTGTAAGTGTGGACAAATTCGTTTTGCCCTTCAATTATATGATGAAATGCTGAGGAAGGGGTACGAACCAGATAAGATAACCTACACAGAACTAATAAGAGGTCACTGTATATGTGGTGACATGAAGGAGGCAGAAGATCTATTTATGAAGTTACATAGATCTGGGTTGCCAATGGATATTGTCCCATTTAAAATTATTTTTGAAAAGTACCATAGAATAGGGGAGTCTGAAATGGCATTTAAATTTTATCAAAGGTGGTTGACAATGATGGCATGAGTAGCTGTTTAACAAAATAAATTGTTCCAGGTTACAGCACTAATGTTGCCATTTTGGCTCACAATCACAGGAGATCTGTGAGATCCCACATTGGTTGGAGAGAGGAACGAAATATTCTTTATAATGGTGTAGAAACCTCTCCCTAGCAGACGTGAGGGGAAGCCCGAATGGAAAGGTCGATTGAGGACAATATCTGCTAGCAGTGAGTTTGGGTTGAAACATTCTTTATAATGGTGTAGAAACCTCTTCCTAGCAGACGTGAAGGGAAGCCCGAATGGAAAGGTCGATTGAGGACAATATCTGCTAGCAGTGAACTTGGGTTGTTACAGAATTGGCGTACAGATCTCTTTTACTGACCAAGTATAATTCGGCCTTCTGTTTGTGGACATTTCTGATGGGTAATGTGCTCCTCCTTAGAGCTGGTGCAAAAGTTCCAATACCGCGAGCATCTAAACGAGTAACCAATTCAGAAGGTGTTTTGGGGATGAACTGAGCTGTTTGTGTTATTAATGGATTTATGCAGCTGATGAGATGAGAATTGAAACTGTGGCACGAGTCTACTCCTGGCCGAAGTGTGTAGCCCGGCTCCATAACGAGGATGCAGCTGAGATTGTGATTGGAGGAGTTTAAGGTGCAGCCTAACTTGACCCATAGTTGAATGCAGTAACTTTCATTTGTATGATGCAAAGTGGTTGGAGTTACTTGTGATGTCATGGTTAAGATCCTCGCCTTATCGAACTGCTGAGCATCTTGACGTGCAGATGTTTTGTCAGTGAAGTTAGCGATGAACGGTGACGGTGAAGAGCGAACAAACTCCATTTTCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGTCATTGTACAGTTCATAATTGAATACAGTAACTTTCATTTGTATGATGCAAAGTGTCATGACGTCGTGGTTAAGATCCTCACCTTATCGAACTGCCGAGCATCTTGACGTGCAGATCTTTTGTCAGTGAAGTTAGCGATGAACGACGACGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGCCAAAGTAGTCATTATACAGTTCAGGTGGAGTTATTGTGACGTTGTGGTTAAGCTCCTCACCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGTTAGCGATGAACACGGCGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGCCATTGTACANACGGTGAAGAGGAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGTCATTGTACAGTTCATAATTGAATACAGTAACTTTCATTTGTATGATGCAAAGTGTCATGACGTCGTGGTTAAGATCCTCACCTTATCGAACTGCCGAGCATCTTGACGTGCAGATCTTTTGTCAGTGAAGTTAGCGATGAACGACGACGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGCCAAAGTAGTCATTATACAGTTCAGGTGGAGTTATTGTGACGTTGTGGTTAAGCTCCTCACCGAGCATCTCGACGTGCAGATCTTTTGTCAGCGAAGTTAGCGATGAACACGGCGGTGAAGAGCAAACAAACTCCATTTCCCTTCATTGATCTCAAGGCTTGAATGAAACAAAGTAGCCATTGTACAGTTCATATGGCTTACACTGTGATTGATCTAATAGGGGGCCATCTAGCGGTACATTTTCCAGTACCCTTGGTGTATTCTATCCAAACCAGGAACCAGGAACCAGGAACACTGGCAATGCTACTGACAGACCTGTGGGTTGAGTAACAGTGCTTATGCTAATTACTTTGCAGGGCTGATCAAGTGACTAAAGTTAACCAAGCAGTGGTGTGTCGGTGAAAGACAGTATGTTTGCCTCTCAATAATGGAGTCGACTTGTTCTTTTCCTCGGTCCGACCTACCTTCTAGTCTCGTTCCAACCGAAGAAATCGAGAAAAGAAGACTACATTTAATTACTTATGTACAAGTTTTTTCGTACTTGGATCAGATGGAGTGGGTAGACATGAAACTCTGGAAACAAGGGTAAATATCGACCCTAGGCAATAGGACAACATATCGGAAATGGTCGAAATAGCCCAGTTAGTAAAACGTAGAACTGAAAATCCTCGTGTCACTGGTTCATAGCGGTGACCCATATTGTGCAATGGCTCATGCTGTTTCCCCAGAACGTGGAGCCAAAATCAGTTTCACTTTTTAAATTGCCTTTTTAAATGAACCTTTATATAAACTGTGAGTGCCTCCCCTGTTTACTGTACAGGGATTCGAACCTCCCATTTTAAGTGTGGTGTCTTAATCGCTAAGCAAT

Coding sequence (CDS)

ATGATGTTCGCGGCGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTGTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGAAGAAAGGAGGAGACTGCAGTCTGCTTGGAGGGACGGCGGAGCACAGCCAGCTATAAGAAATTCGCCGCGGCTGTTGATTTCACCGGCGTCGTCGAAACTTTGGGCCTTCCATATTGCCTAGATTGTTATTTGATTTCGAATTACGAAGTGAAATCCAGAGTAGAATATTCGGCTATCTCGATGATGTTCGCGGCGTTTGTAATTGAATCGCCTCCGTCTCACATTTCTGTGGTTGGATTCCTGAACGGAGCCCTTAACTTTCTCAAGCGCGATATTTCTCGGATGTTCGCCGTCTTTAACGGCCTACCTAACGTTGATGCAGTGGCGAGGCCCAACGAGGATGAGGATTCATTACAGCCTGCTATTAAAAGTTTGATGAAAACTGACGACCATTGCGAGTTGAGATTCTCGGATTGTTTTTCAGAAAAGCGTAATTTTGATGGCGAAGGAGATCCGCAGGCTGTTTTCAACGTGTTGGACGCTCTTCTCAGGGGTAGTTTGGATCGTTTGAAGGCCATGAGGGAAAGCATATGTTTAGCGAAGTCAGGTCTTCAGAAATGTTTTTGGGAGGCCGTTTAG

Protein sequence

MMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPAIKSLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALVRGSLDRLKAMRRKEETAVCLEGRRSTASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEYSAISMMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPAIKSLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKCFWEAV
Homology
[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy Swiss-Prot
Match: Q8L6Y3 (Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana OX=3702 GN=At5g24830 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.2e-10
Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0 

Query: 183 ESPPSHISVVGFLNGALNFLKRDISRMFA-VFNGLPN----VDAVARPNEDEDSLQPAIK 242
           E   S  +V   LN +L+F+  ++SR+ A +F  L +    +  + RP        P+I 
Sbjct: 9   EVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERP--------PSI- 68

Query: 243 SLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKS 297
               + +H  L     FS+++++D + DP+A+FNVLD +L+ SLDRL ++RES+C  KS
Sbjct: 69  ----SGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKS 114

[Close]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match: KAG7029760.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352 bits (904), Expect = 1.22e-113
Identity = 178/192 (92.71%), Postives = 181/192 (94.27%), Query Frame = 0 

Query: 116 KEETAVCLEGRRSTASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEYSAISM 175
           KEE AVCLEGRRSTASYKK AAAVDFTGVVETLGL YCLDCYLISNYEVKSRVEYSAISM
Sbjct: 1   KEEAAVCLEGRRSTASYKKLAAAVDFTGVVETLGLLYCLDCYLISNYEVKSRVEYSAISM 60

Query: 176 MFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPA 235
           MFAAF IESP SHISV+GFLNGALNF KRDISRMFAVFNGL N+DAVARP+EDEDSLQPA
Sbjct: 61  MFAAFAIESPSSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 120

Query: 236 IKSLMKTD-DHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLA 295
           IKSLM TD DHCELRFSDCFSEKRNFDGE DPQAVFNVLDALLRGSLDRLKAMRESICLA
Sbjct: 121 IKSLMTTDGDHCELRFSDCFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 180

Query: 296 KSGLQKCFWEAV 306
           KSGLQKC WEAV
Sbjct: 181 KSGLQKCLWEAV 192

[Close]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match: KAG6598819.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349 bits (895), Expect = 1.82e-110
Identity = 176/192 (91.67%), Postives = 180/192 (93.75%), Query Frame = 0 

Query: 116 KEETAVCLEGRRSTASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEYSAISM 175
           +EETAVCLEGRRSTASYKK AA VDFTGVVETLGL YCLDCYLISNYEVKSRVEYSAISM
Sbjct: 216 EEETAVCLEGRRSTASYKKLAADVDFTGVVETLGLLYCLDCYLISNYEVKSRVEYSAISM 275

Query: 176 MFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPA 235
           MFAAF IESP SHISV+GFLNGALNF KRDISRMFAVFNGL N+DAVARP+EDEDSLQPA
Sbjct: 276 MFAAFAIESPSSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPA 335

Query: 236 IKSLMKTD-DHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLA 295
           IK LM TD DHCELRFSDCFSEKRNFDGE DPQAVFNVLDALLRGSLDRLKAMRESICLA
Sbjct: 336 IKGLMTTDGDHCELRFSDCFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLA 395

Query: 296 KSGLQKCFWEAV 306
           KSGLQKC WEAV
Sbjct: 396 KSGLQKCLWEAV 407

[Close]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match: XP_022929600.1 (pentatricopeptide repeat-containing protein At5g24830-like [Cucurbita moschata])

HSP 1 Score: 337 bits (864), Expect = 1.39e-107
Identity = 170/185 (91.89%), Postives = 174/185 (94.05%), Query Frame = 0 

Query: 123 LEGRRSTASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEYSAISMMFAAFVI 182
           LEGRRSTASYKK AAAVDFTGVVETLGL YC+DCYLISNYEVKSRVEYSAISMMFAAF  
Sbjct: 22  LEGRRSTASYKKLAAAVDFTGVVETLGLLYCIDCYLISNYEVKSRVEYSAISMMFAAFAS 81

Query: 183 ESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPAIKSLMKT 242
           ESPPSHISV+GFLNGALNF KRDISRMFAVFNGL N+DAVARP+EDEDSLQPAIKSLM T
Sbjct: 82  ESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPAIKSLMTT 141

Query: 243 D-DHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC 302
           D DHCELRFS CFSEKRNFDGE DPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC
Sbjct: 142 DGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC 201

Query: 303 FWEAV 306
            WEAV
Sbjct: 202 LWEAV 206

[Close]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match: XP_023545689.1 (pentatricopeptide repeat-containing protein At5g24830-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230 bits (586), Expect = 6.84e-73
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQP 60
           MMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQP
Sbjct: 1   MMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQP 60

Query: 61  AIKSLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALVRGSLDRLKAMR 114
           AIKSLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALVRGSLDRLKAMR
Sbjct: 61  AIKSLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALVRGSLDRLKAMR 114

[Close]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match: KAG6585416.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 239 bits (611), Expect = 6.01e-70
Identity = 131/197 (66.50%), Postives = 147/197 (74.62%), Query Frame = 0 

Query: 115 RKEETAVCLEGRR----STASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEY 174
           RK+ TAVCLE RR    STA Y+  A+AV         G  Y +   L+S+Y+VKSR E 
Sbjct: 26  RKDGTAVCLERRRGRRRSTAGYRNLASAVGLNWHRRNFGFLYHVFSSLLSDYKVKSRAED 85

Query: 175 SAISMMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDED 234
            AISM F A  IESPPSHI V+GFLNGALN LKRD SRMFA+  G PN++  AR NEDED
Sbjct: 86  LAISMAFTALAIESPPSHIIVLGFLNGALNSLKRDFSRMFAILYGRPNIEEAARSNEDED 145

Query: 235 SLQPAIKSLMKT-DDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRE 294
           S   AIKSLM T DD+CELR SDCFSEK NF+GEG+PQAVFNVLDALL+GSLDRLKAMRE
Sbjct: 146 SFPSAIKSLMATVDDNCELRSSDCFSEKHNFEGEGNPQAVFNVLDALLKGSLDRLKAMRE 205

Query: 295 SICLAKSGLQKCFWEAV 306
           SI LAKSGLQKC  +AV
Sbjct: 206 SISLAKSGLQKCIVDAV 222

[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match: A0A6J1EUU1 (pentatricopeptide repeat-containing protein At5g24830-like OS=Cucurbita moschata OX=3662 GN=LOC111436135 PE=4 SV=1)

HSP 1 Score: 337 bits (864), Expect = 6.74e-108
Identity = 170/185 (91.89%), Postives = 174/185 (94.05%), Query Frame = 0 

Query: 123 LEGRRSTASYKKFAAAVDFTGVVETLGLPYCLDCYLISNYEVKSRVEYSAISMMFAAFVI 182
           LEGRRSTASYKK AAAVDFTGVVETLGL YC+DCYLISNYEVKSRVEYSAISMMFAAF  
Sbjct: 22  LEGRRSTASYKKLAAAVDFTGVVETLGLLYCIDCYLISNYEVKSRVEYSAISMMFAAFAS 81

Query: 183 ESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPAIKSLMKT 242
           ESPPSHISV+GFLNGALNF KRDISRMFAVFNGL N+DAVARP+EDEDSLQPAIKSLM T
Sbjct: 82  ESPPSHISVLGFLNGALNFFKRDISRMFAVFNGLSNIDAVARPDEDEDSLQPAIKSLMTT 141

Query: 243 D-DHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC 302
           D DHCELRFS CFSEKRNFDGE DPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC
Sbjct: 142 DGDHCELRFSACFSEKRNFDGESDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKC 201

Query: 303 FWEAV 306
            WEAV
Sbjct: 202 LWEAV 206

[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match: A0A5A7VD74 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G003090 PE=3 SV=1)

HSP 1 Score: 224 bits (570), Expect = 4.06e-63
Identity = 123/168 (73.21%), Postives = 135/168 (80.36%), Query Frame = 0 

Query: 141 FTGVVETLGLPYCLDCYLISNYEVKSRVEY-SAISMMFAAFVIESPPSHISVVGFLNGAL 200
           FTGVVETL   YCL   L+S+ EVK R EY +AIS+      IES PS I V+GFL+GAL
Sbjct: 255 FTGVVETLA-KYCLISSLVSDREVKFRAEYLAAISIDDGHGAIESAPSQILVLGFLHGAL 314

Query: 201 NFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPAIKSLMKT-DDHCELRFSDCFSEKR 260
           N LKRDISRMFAVF G P++D  AR NEDEDSL PA+KSLM T  DHC+LR SDCFSEK 
Sbjct: 315 NSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPALKSLMTTVGDHCDLRSSDCFSEKH 374

Query: 261 NFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKSGLQKCFWEAV 306
           NF+GEGDP AVFNVLDALL+GSLDRLKAMRESICLAKSGLQKCF EAV
Sbjct: 375 NFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLAKSGLQKCFLEAV 421

[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match: A0A1S3BBE9 (pentatricopeptide repeat-containing protein At5g24830 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488242 PE=4 SV=1)

HSP 1 Score: 198 bits (503), Expect = 3.23e-55
Identity = 103/132 (78.03%), Postives = 111/132 (84.09%), Query Frame = 0 

Query: 176 MFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPA 235
           M  A  IES PS I V+GFL+GALN LKRDISRMFAVF G P++D  AR NEDEDSL PA
Sbjct: 1   MVTALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARFNEDEDSLHPA 60

Query: 236 IKSLMKT-DDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLA 295
           +KSLM T  DHC+LR SDCFSEK NF+GEGDP AVFNVLDALL+GSLDRLKAMRESICLA
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKHNFNGEGDPGAVFNVLDALLKGSLDRLKAMRESICLA 120

Query: 296 KSGLQKCFWEAV 306
           KSGLQKCF EAV
Sbjct: 121 KSGLQKCFLEAV 132

[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match: A0A0A0LPD4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379150 PE=4 SV=1)

HSP 1 Score: 197 bits (500), Expect = 8.80e-55
Identity = 102/131 (77.86%), Postives = 110/131 (83.97%), Query Frame = 0 

Query: 176 MFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQPA 235
           M AA  IES PS I V+GFL+GALN LKRDISRMFAVF G P++D  AR NEDEDSL PA
Sbjct: 1   MVAALAIESAPSQILVLGFLHGALNSLKRDISRMFAVFYGRPDIDEAARSNEDEDSLHPA 60

Query: 236 IKSLMKT-DDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLA 295
           +KSLM T  DHC+LR SDCFSEKRNF+GEGDP AVFNVLDALL+GSLDRLK MRESICLA
Sbjct: 61  LKSLMTTVGDHCDLRSSDCFSEKRNFNGEGDPGAVFNVLDALLKGSLDRLKTMRESICLA 120

Query: 296 KSGLQKCFWEA 305
           KSGLQKC  EA
Sbjct: 121 KSGLQKCVLEA 131

[Close]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match: A0A6J1BQ27 (pentatricopeptide repeat-containing protein At5g24830 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111004612 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.68e-54
Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 0 

Query: 175 MMFAAFVIESPPSHISVVGFLNGALNFLKRDISRMFAVFNGLPNVDAVARPNEDEDSLQP 234
           MMF A  I+SPPSHI V G LNGALN  KRDISRMFA+F G PN+DAV R  +DEDS   
Sbjct: 1   MMFTALTIQSPPSHIIVFGILNGALNSFKRDISRMFAIFYGQPNIDAVVRSKKDEDSFPS 60

Query: 235 AIKSLMKT-DDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICL 294
           A+KSLM T DDHCELR  DCFSEK NFDGEGDP+AVFNVLDALL+GSLDRLKAMRESI L
Sbjct: 61  AVKSLMTTVDDHCELRSLDCFSEKHNFDGEGDPRAVFNVLDALLKGSLDRLKAMRESISL 120

Query: 295 AKSGLQKCFWEAV 306
           AK+GLQ+C   AV
Sbjct: 121 AKTGLQRCILAAV 133

[Close]
BLAST of Cp4.1LG11g05580 vs. TAIR 10
Match: AT5G24830.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-11
Identity = 41/119 (34.45%), Postives = 68/119 (57.14%), Query Frame = 0 

Query: 183 ESPPSHISVVGFLNGALNFLKRDISRMFA-VFNGLPN----VDAVARPNEDEDSLQPAIK 242
           E   S  +V   LN +L+F+  ++SR+ A +F  L +    +  + RP        P+I 
Sbjct: 9   EVTSSQFTVFRLLNQSLDFVSDNVSRLLAPIFTNLRDFEMRLSCIERP--------PSI- 68

Query: 243 SLMKTDDHCELRFSDCFSEKRNFDGEGDPQAVFNVLDALLRGSLDRLKAMRESICLAKS 297
               + +H  L     FS+++++D + DP+A+FNVLD +L+ SLDRL ++RES+C  KS
Sbjct: 69  ----SGNHSHLCTEKWFSDQKDYDQKEDPEAIFNVLDYILKSSLDRLASLRESVCQTKS 114

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g05580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L6Y33.2e-1034.45Pentatricopeptide repeat-containing protein At5g24830 OS=Arabidopsis thaliana OX... [more]
BLAST of Cp4.1LG11g05580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7029760.11.22e-11392.71Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6598819.11.82e-11091.67Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022929600.11.39e-10791.89pentatricopeptide repeat-containing protein At5g24830-like [Cucurbita moschata][more]
XP_023545689.16.84e-73100.00pentatricopeptide repeat-containing protein At5g24830-like [Cucurbita pepo subsp... [more]
KAG6585416.16.01e-7066.50Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Cp4.1LG11g05580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1EUU16.74e-10891.89pentatricopeptide repeat-containing protein At5g24830-like OS=Cucurbita moschata... [more]
A0A5A7VD744.06e-6373.21Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BBE93.23e-5578.03pentatricopeptide repeat-containing protein At5g24830 isoform X1 OS=Cucumis melo... [more]
A0A0A0LPD48.80e-5577.86Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G379150 PE=4 SV=1[more]
A0A6J1BQ274.68e-5474.44pentatricopeptide repeat-containing protein At5g24830 isoform X1 OS=Momordica ch... [more]
BLAST of Cp4.1LG11g05580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G24830.12.3e-1134.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 8..141
NoneNo IPR availablePANTHERPTHR47941:SF7PPR CONTAINING PLANT-LIKE PROTEINcoord: 182..304
coord: 8..141
NoneNo IPR availablePANTHERPTHR47941PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 3, MITOCHONDRIALcoord: 182..304

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g05580.1Cp4.1LG11g05580.1mRNA