Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAAAAAAACAAAATTGATAAGAATAACCTTAGCTTCCCCTTCTCTTCCGCTCATACCCACAAATTTCAATGGAATGGAAGATGGAGGATTAAAGAAGCAAAATTCAGTTGCTCGAGGGATGGAAAAAAAATGGGGAAACAAGAATCCAAACAGCACTCTTATCAAAACTGGTTGAATGAATCCTCTTTGATTAAATCATTTCCCCAACCCAATAAAAAGCTTAAATCTCACTTCATAAAGATAAGAGAATTCCCAGTACTTAAATGCCACAACTATTCTCTCTCTTTCTCTGTCTATCTCCATCTCTCTCAACTTTATGTATGTAAAAATAATAAATGGGAGCTACTTTAAAGGGCAGAGGATAAAAGGAAGAAATTGGAAGGGAGTTTATAGGGAAATCGTGGTCCTATGGGCCAAAACTTTAGTTTAGGTGATAAATTTTTTTGTTTCTCAATCCACTTTTCGGGGGGTTTTTATTTTCCTCTTCCTCAGAATAAATTCTCTTACAGTTTTAAATTAATTAGTTTCTGGGAGTTATAGAATATTTTTTTGGGTTCTTCTTTCTGCCCATTTAACAATGAAAATGGCATATTACCAATCATCTTTTCCCCCTATAGGAAACACCCATCATTGCTCCCAACAATCCTTTTCAACCTTAGAAACCTGAGCTTCTAAAAAGACTTAGAATTGGGTGTCTAATTCCCATTCTTCCATTTCTTCCTTTAATTTCTCAATGCTTCTTCAACTTAAATACCAGCCTTCATAATATCCTTTTCTCTCCCTCTTCTACTACTACCCCTCCATTTCTCTCTCCCCCTCTCTCTCTTTCTCTCTCTGCTTTTCCTTTTAGTTCCCATAAGGTCACAATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTCCATCTCAGAAATCATAATTGCTCGTGTCTTTGTTTGTTCTGTTATGTTTTATTTTGTTTGGAAGCATTGGGTTCAGAATCTAAGAGATTTTGAACTCTTGATATACAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAGACAGATGTTGAAAAATATTGTAGTTGTTATGGTTCAAAGCCCAAAACGAAAAAAAAAAAGGAAAAAAAAAAAAAAAACAAGCAGAAGAATCAATGGATAGAGTTGTACCTTTTAACCCTCTGCTTCCGTTTCCAGACTTCTCTTCAATCCTCTAAAAAGTAAAAACAATCAACAGATGAATATAGGGTCAAAAAAGAAATGAGAAACCCATAAATTAATTAATACTAAAAAGTATTATCAAATCTTTACTAATTTTTTTATAGCA
mRNA sequence
AAAAAAAAAAACAAAATTGATAAGAATAACCTTAGCTTCCCCTTCTCTTCCGCTCATACCCACAAATTTCAATGGAATGGAAGATGGAGGATTAAAGAAGCAAAATTCAGTTGCTCGAGGGATGGAAAAAAAATGGGGAAACAAGAATCCAAACAGCACTCTTATCAAAACTGGTTGAATGAATCCTCTTTGATTAAATCATTTCCCCAACCCAATAAAAAGCTTAAATCTCACTTCATAAAGATAAGAGAATTCCCAGTACTTAAATGCCACAACTATTCTCTCTCTTTCTCTGTCTATCTCCATCTCTCTCAACTTTATGTATGTAAAAATAATAAATGGGAGCTACTTTAAAGGGCAGAGGATAAAAGGAAGAAATTGGAAGGGAGTTTATAGGGAAATCGTGGTCCTATGGGCCAAAACTTTAGTTTAGGTGATAAATTTTTTTGTTTCTCAATCCACTTTTCGGGGGGTTTTTATTTTCCTCTTCCTCAGAATAAATTCTCTTACAGTTTTAAATTAATTAGTTTCTGGGAGTTATAGAATATTTTTTTGGGTTCTTCTTTCTGCCCATTTAACAATGAAAATGGCATATTACCAATCATCTTTTCCCCCTATAGGAAACACCCATCATTGCTCCCAACAATCCTTTTCAACCTTAGAAACCTGAGCTTCTAAAAAGACTTAGAATTGGGTGTCTAATTCCCATTCTTCCATTTCTTCCTTTAATTTCTCAATGCTTCTTCAACTTAAATACCAGCCTTCATAATATCCTTTTCTCTCCCTCTTCTACTACTACCCCTCCATTTCTCTCTCCCCCTCTCTCTCTTTCTCTCTCTGCTTTTCCTTTTAGTTCCCATAAGGTCACAATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAGACAGATGTTGAAAAATATTGTAGTTGTTATGGTTCAAAGCCCAAAACGAAAAAAAAAAAGGAAAAAAAAAAAAAAAACAAGCAGAAGAATCAATGGATAGAGTTGTACCTTTTAACCCTCTGCTTCCGTTTCCAGACTTCTCTTCAATCCTCTAAAAAGTAAAAACAATCAACAGATGAATATAGGGTCAAAAAAGAAATGAGAAACCCATAAATTAATTAATACTAAAAAGTATTATCAAATCTTTACTAATTTTTTTATAGCA
Coding sequence (CDS)
ATGGATCCTTCCTCAACCAACTCTGTCAATGGCTTCTATACCTTTCTGACTCGAGGGATCGATGATCTTGAACGGGTTTACCTGTCAAATAATTTCATGTCAATCCAATTCCTTCAAAGGGTTCTTTCACTTCTCCGATCATTTCATTCCCAATTGACACTTCTTGTCCAAAAGCTTCATTTGCCTGTGGGGGAGAAGTGGCTGGATGAATATATGGATGAGAGTTCTAAGCTGTGGGACGCCTGTCATGTCCTCAAAACAGGCATTTCTGGCATCGAAAATTTCTACTCTGCTGGGTTCAATATCACTTCCTCTCTCGATACTCATCGCCATCTGAGTCCGCAACTTTCTCGTCAGGTGATTAGGGCAATATCAGGGTGTAGAAGGGAAGCGGTGGGATTGGAGGAGGAGAATCGGGCACTGATGGAAGCAAGAATTCAACCGCTATCTCTGAGGTTCGATGAGAAAGTATCGATCGAATCAAAACTGAACGGATTCAATGGATTCAGGGGAGTTCTGTACGCAATGAGAAATGTGAGCTCACTCCTCCTAATGATCTTGCTCTACGGGCTGGTTTACTGTTGGCCGGAATCGAACTTCGTAAGAGGGGGGTATGAAGGGTGTCTGTTTTTTGGTTCAGCTTTTATGATATCGACGGCGAGATTGCAGCAGAGAGTCGCCGGAGAAATCAATCAGATGAACGGGAGGCCTGGGATTTTGCTGTATGAATTCAGGAGATCAAAGATGGCGATGGAGGAATTGAGGGCAGAATTGGAGAGGAGGGTGGGGATAGGGTCCCAGGGAGTGGTGGAATGGGAAACAGAGATTGGAATTAGAGAAACGTTTGAGAATTTGAGAGATTGTTTTGGGGTCCTGAGATCCGGAGCTGAAAATATTGTTTGCCAACTTGATGATTTCATTGATGAAATCGTTGAAGGCAGGAAGAAGCTTTTGGACTTTTGTAGCCATAGGTAG
Protein sequence
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLHLPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR
Homology
BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match:
XP_023545213.1 (uncharacterized protein LOC111804692 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 643 bits (1659), Expect = 1.18e-232
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match:
KAG7029609.1 (hypothetical protein SDJN02_07949, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 642 bits (1655), Expect = 4.81e-232
Identity = 323/324 (99.69%), Postives = 324/324 (100.00%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match:
KAG6598664.1 (hypothetical protein SDJN03_08442, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 640 bits (1651), Expect = 1.96e-231
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IR ISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRTISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match:
XP_022962628.1 (uncharacterized protein LOC111463023 [Cucurbita moschata])
HSP 1 Score: 639 bits (1649), Expect = 3.95e-231
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKV IESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVLIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. NCBI nr
Match:
XP_022997217.1 (uncharacterized protein LOC111492186 [Cucurbita maxima])
HSP 1 Score: 635 bits (1638), Expect = 1.81e-229
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELER VGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELER-VGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 323
BLAST of Cp4.1LG11g04180 vs. ExPASy TrEMBL
Match:
A0A6J1HFB5 (uncharacterized protein LOC111463023 OS=Cucurbita moschata OX=3662 GN=LOC111463023 PE=4 SV=1)
HSP 1 Score: 639 bits (1649), Expect = 1.91e-231
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKV IESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVLIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. ExPASy TrEMBL
Match:
A0A6J1K4E8 (uncharacterized protein LOC111492186 OS=Cucurbita maxima OX=3661 GN=LOC111492186 PE=4 SV=1)
HSP 1 Score: 635 bits (1638), Expect = 8.76e-230
Identity = 322/324 (99.38%), Postives = 323/324 (99.69%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSLDTHRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELER VGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELER-VGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 323
BLAST of Cp4.1LG11g04180 vs. ExPASy TrEMBL
Match:
A0A5A7V9I2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001210 PE=4 SV=1)
HSP 1 Score: 629 bits (1621), Expect = 3.55e-227
Identity = 316/324 (97.53%), Postives = 321/324 (99.07%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYS+GFNITSSL+THRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVG+GSQGVVEWETEIGIRE ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. ExPASy TrEMBL
Match:
A0A1S3BCI5 (uncharacterized protein LOC103488422 OS=Cucumis melo OX=3656 GN=LOC103488422 PE=4 SV=1)
HSP 1 Score: 629 bits (1621), Expect = 3.55e-227
Identity = 316/324 (97.53%), Postives = 321/324 (99.07%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYS+GFNITSSL+THRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSSGFNITSSLETHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVG+GSQGVVEWETEIGIRE ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGVVEWETEIGIRERVENLRACFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. ExPASy TrEMBL
Match:
A0A0A0LK57 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G317400 PE=4 SV=1)
HSP 1 Score: 624 bits (1608), Expect = 3.40e-225
Identity = 314/324 (96.91%), Postives = 319/324 (98.46%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLS LRSFHSQL LLVQKLH
Sbjct: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSHLRSFHSQLILLVQKLH 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVGEKWLDEYMDESSKLWDACHVLK+GISGIENFYSAGFNITSSL+THRHLSPQLSRQV
Sbjct: 61 LPVGEKWLDEYMDESSKLWDACHVLKSGISGIENFYSAGFNITSSLETHRHLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS
Sbjct: 121 IRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSIESKLNGFNGFRGVLYAMRNVS 180
Query: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEINQMNGRPGIL 240
SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQ+RVAGEINQMNGRPGIL
Sbjct: 181 SLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQERVAGEINQMNGRPGIL 240
Query: 241 LYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGVLRSGAENIV 300
LYEFRRSKMAMEELRAELERRVG+GSQG+VEWETEIGIRE ENLR CFGVLRSGAENIV
Sbjct: 241 LYEFRRSKMAMEELRAELERRVGMGSQGLVEWETEIGIRERVENLRACFGVLRSGAENIV 300
Query: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
CQLDDFIDEIVEGRKKLLDFCSHR
Sbjct: 301 CQLDDFIDEIVEGRKKLLDFCSHR 324
BLAST of Cp4.1LG11g04180 vs. TAIR 10
Match:
AT1G22030.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G77855.1); Has 99 Blast hits to 99 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 96; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 384.4 bits (986), Expect = 8.9e-107
Identity = 210/345 (60.87%), Postives = 250/345 (72.46%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MDPS NSVNGFY+FL R ++DLERVYLSNNFMS+ FLQR L LLR+ HS LTLLVQKL
Sbjct: 1 MDPSCANSVNGFYSFLNRSMEDLERVYLSNNFMSVHFLQRALCLLRTSHSHLTLLVQKLQ 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRHLSPQLSRQV 120
LPVG+KWLDEYMDESSKLW+AC V+K+ +S +ENF SAG +I S+LD R LSPQLSRQV
Sbjct: 61 LPVGDKWLDEYMDESSKLWEACLVIKSAVSSVENFSSAGISIASTLD--RRLSPQLSRQV 120
Query: 121 IRAISGCRREAVGLEEENRALMEARIQ--PLSLRFDEKVSIESKL---NGFNGFRGVLYA 180
IRAISGCRREA+G+EEENRALME R+Q P ++ES NGF+GFRGVLYA
Sbjct: 121 IRAISGCRREAIGIEEENRALMENRVQRFPFWSEQTSATAMESSTKLQNGFSGFRGVLYA 180
Query: 181 MRNVSSLLLMILLYGLVYCWP------------ESNFVRGGYEGCLFFGSAFMISTARLQ 240
RN+SSLLLM+L+ GLVYC+P ++ GG+ G + RLQ
Sbjct: 181 TRNMSSLLLMVLMNGLVYCFPGDAATQTQTQITQTQSQVGGFAGAM----------GRLQ 240
Query: 241 QRVAGEINQMNGRPGILLYEFRRSKMAMEELRAELERRV----GIGSQGVVEWETEIGIR 300
QRVA E+ +M R GIL++E+RRSK A+EEL+AELERR G G + E E E +R
Sbjct: 241 QRVAAEVGRMGIRKGILMHEYRRSKAALEELKAELERRFCGGGGGGGEREEEEEDERELR 300
Query: 301 ETFENLRDCFGVLRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 325
E ENL+ FG LR+G E+IV Q+DDF DEIVEGRKKLLDFCSHR
Sbjct: 301 ERVENLKGYFGNLRNGTESIVAQIDDFFDEIVEGRKKLLDFCSHR 333
BLAST of Cp4.1LG11g04180 vs. TAIR 10
Match:
AT1G77855.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22030.1); Has 120 Blast hits to 120 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 120; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 363.2 bits (931), Expect = 2.1e-100
Identity = 197/333 (59.16%), Postives = 246/333 (73.87%), Query Frame = 0
Query: 1 MDPSSTNSVNGFYTFLTRGIDDLERVYLSNNFMSIQFLQRVLSLLRSFHSQLTLLVQKLH 60
MD S +NSVNGFY+FL R ++DLERVY+SNNFMS+QFLQRV+ LLR+ HS LTLLVQKL+
Sbjct: 1 MDQSCSNSVNGFYSFLNRSMEDLERVYISNNFMSLQFLQRVICLLRTSHSHLTLLVQKLN 60
Query: 61 LPVGEKWLDEYMDESSKLWDACHVLKTGISGIENFYSAGFNITSSLDTHRH----LSPQL 120
LPVG+KWLD+YMDE+SKLWD CHV+K+ IS IE+F S+ +ITS+LD H H LSPQ+
Sbjct: 61 LPVGDKWLDDYMDETSKLWDVCHVIKSAISTIESFCSSAISITSTLDGHYHHRRLLSPQI 120
Query: 121 SRQVIRAISGCRREAVGLEEENRALMEARIQPLSLRFDEKVSI----ESKL-NGFNGFRG 180
SRQVIRAISGCRREAVG+EEENRALME RIQ + E+V+ SK+ NGF+GFRG
Sbjct: 121 SRQVIRAISGCRREAVGIEEENRALMENRIQRFPF-WSEQVTTTGMESSKIQNGFSGFRG 180
Query: 181 VLYAMRNVSSLLLMILLYGLVYCWPESNFVRGGYEGCLFFGSAFMISTARLQQRVAGEIN 240
V+ M+N++SLLL+IL+ GLVY P V G + RL+QRVA E+
Sbjct: 181 VMNTMKNINSLLLVILMQGLVYYIPGDTTVPTG-------------TMMRLKQRVAAEME 240
Query: 241 QMNGRPGILLYEFRRSKMAMEELRAELERRVGIGSQGVVEWETEIGIRETFENLRDCFGV 300
++ R G+++YE+RRSK AMEEL+ ELERR G G E E G+RE ENL+ G
Sbjct: 241 RIGVRKGMMMYEYRRSKTAMEELKVELERRCCGG--GGEEEAVEKGLRERIENLKGSVGS 300
Query: 301 LRSGAENIVCQLDDFIDEIVEGRKKLLDFCSHR 325
LR+G E+IV Q+DDF D+IV+GRK LLD+CSHR
Sbjct: 301 LRNGTESIVAQIDDFFDDIVDGRKMLLDYCSHR 317
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023545213.1 | 1.18e-232 | 100.00 | uncharacterized protein LOC111804692 [Cucurbita pepo subsp. pepo] | [more] |
KAG7029609.1 | 4.81e-232 | 99.69 | hypothetical protein SDJN02_07949, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6598664.1 | 1.96e-231 | 99.38 | hypothetical protein SDJN03_08442, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022962628.1 | 3.95e-231 | 99.38 | uncharacterized protein LOC111463023 [Cucurbita moschata] | [more] |
XP_022997217.1 | 1.81e-229 | 99.38 | uncharacterized protein LOC111492186 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1HFB5 | 1.91e-231 | 99.38 | uncharacterized protein LOC111463023 OS=Cucurbita moschata OX=3662 GN=LOC1114630... | [more] |
A0A6J1K4E8 | 8.76e-230 | 99.38 | uncharacterized protein LOC111492186 OS=Cucurbita maxima OX=3661 GN=LOC111492186... | [more] |
A0A5A7V9I2 | 3.55e-227 | 97.53 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BCI5 | 3.55e-227 | 97.53 | uncharacterized protein LOC103488422 OS=Cucumis melo OX=3656 GN=LOC103488422 PE=... | [more] |
A0A0A0LK57 | 3.40e-225 | 96.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G317400 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT1G22030.1 | 8.9e-107 | 60.87 | CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Ar... | [more] |
AT1G77855.1 | 2.1e-100 | 59.16 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |