Cp4.1LG11g03870 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g03870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	protein root UVB sensitive 3
Location	Cp4.1LG11: 2149999 .. 2157088 (+)
RNA-Seq Expression	Cp4.1LG11g03870
Synteny	Cp4.1LG11g03870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCGGAAAAATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATTCAAAGGCAATGTTCTGATTCCCTTCCCATCTCAGATTCCATTCACCACTTTTGGAAATTTGCGATTGATATTTCCTCTTTCTTTTTTTCAATCTATAGATCTGGTTCTCGTTTCAAAATCGTGGGGAGACGATTCTTTGACGCGTTTGTACCGGAGNTTTTTTTTTTTTTTTTTTTTTCTTCTTTTTCTTTTTCCTTTCTTATTATCAATCGTTCGTTCAATTGCAGGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGGTAAAAGTTTAATTTACTTGTTTCTCACCTGTTACATTTGGCAATCTTAATCACCATGAATATGAGCTGATGTCAATAATAAAATGCTTGGAATGGATGAATTCAAGCAACAGTGGTTAGTTTTCTAGGATTTTACATCTTAAGAGTTTTCTTGATGACAATATGTTGTAGGGTCAAGTAACCTTGAGATTAGTCGGGATGTGTGCAAATTGGCTAAGATACTCATAGATTACAAAATAAACATTTGGCAATATTATGGTTTGCATTGTAACATTTTCCAGTGAGAACAGTGAGTTCTTGAGTTATGATTTTCATCGTCTTTCAGGGTCTATCGACATACATTAGGACCATGCTCTCTACCCAAGTAAGGCCTTTTTATTATATATATATATATATATATATACACACATGTGCAGTTCAGGTTCTTCTAAATTTAATATGCATTTACGCCCAATCTATCCTAGGCTCTCCTGAGCGCCATTGGGGTCGGAGAGCAATCAGCAACTGTCATTGGTGCAACATTTCAGGTGAACTCATAACTGAACTTTTGATAATCGATCTCAAGTTTTTGTGGCTTGGAAGATAGATACCTGTAATGAATGTGCTGTTAGTTAATAAATTTTTCTTTCTTTTCTGTTGCAACTTTTCCAGTGGTTTTTGAGGGATTTAACTGGAATGGTTGGAGGTATCTTATTCACATTTTACCAGGTGTGCTGTTCTCTTCTGTAATCGTAAATAAATCTATATCTGATTTACTTGCATAGTAATTTGCTTGAAAATTTGTTCCATAATAGCGTAAATAAAGGGGAAAGGGGTTTTGGATGCAGATACAATTTTATACTTAGTCTTCTCCTACTAAATTCTTTTGTAATCACAGCCTTTAAATGGTTATAAACAACTGAAAGGTTTTCTTTTGCTAGTTTTTTCGGGGAGGGGTAATCTCTACCCATTGCCCTTAGGTTGTCTCGTTTGTTCCTTTTGATGAATACACACATGTTTCCTATCGAAAAAAAAAAAAAAAATAGTCTTCTCCTATCAAATTCAATATTTTGTTGTAATAATATTTATAGAATTCAAGACTTGTAGAGTTAGTCTAGAATTCAGTTCACCATTTTTATTATGAATCCTCTTTCTTGGCTATGATATAGCAACAACAATTGTCCATTTCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTGTATTTTCCCCCTTATTCCTTACTTAACCTGCAATAAGTTCTCTTTCTAGGACAAGTACATGCAGAAATGTGGGTATCTAGTGGATTAGACTTATCCATTTCCTTCTGATTTTTCCTTTATATCTTTTCCGTGGAGAGTTTCCATTATAATGTAAATTATCATCTGCTTAAACCGTTGTTCATAGCTAAGCAAACTAACCTACAGCCATGGAATTGTTGAAGTAAATAGATCTCTAATTTTCGGAAAGATTACTACACTGAGCATTTTCACTTTTCCATGTTGCATTTTGAATTGTATGTCCTAAGATAACCAACGACTTTGTACTGAACAGGTATGTTGATGGACCTCGTTTCCCCCCTGTTTCCTTCAGCATTTATGCTTATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCAGTAAGTCCTTACAGATTTTAGAAATTTTCATGTAAACATGGTATTGTCATGTAAATGTTGAGATTTTTCTAATGGTATCGTGTTTCTAAGTTGTTATAAATAATGTTATATTAGTTCAGTGAAAAAAACATTTTCAAATTGATATTTAGCTCACATTTCATCTTTAGTTCAGTGATGAATTTAAACTTTAAACTTTAAACTTTAAACATTTAATTTCATTAGAGTACACCATAAACTTCGATAAGTATTAAATTTGTACACATTCAAAACCAAAATAGAAAATTACCCTTTAATCAATCAATAAATCATGTAAAGTTCAACTAACAAAACACCAACATGTTGACTCAAAAGGGACCAAGCCAATTCGAGAAACGCCCAATTGTTGCTAAAAAACATCCAATACAGTTTGAAGGACTAGTACCTAAAAGATATAGCCAAAAAAACTTTAGAAAAATGGAACTCAAGAGGAAAGGAGGGTAGTTTTGGTGGTTAGGGTGGTCATGTGCTGTAGACTTATGGATGATACTAATTCGTGTATTCAACAGAAAATAAGCATGCTGTTTGGACTTCATATTTTAATTAATTGGATGTAATCCTTAATGCTAACTATAGATTTCAATCCAAATCAGCCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGTATAGCGCAAGCCACTTTCCAGGTGAAGAATGATCTCTGATCCAGATATATTGTAATGACAATTGTCACTCTTGCACCAATAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTCCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGGTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGGTGAGTTATTTGCTTGAACAAACCCTCGCTTTATAGTATATGTTGACGTGACATTTAGTTTTTAAATTTCTGAATTGGTAAGAGTTCAAATTTTACTCCATCATCTCTTATGAACACGTTAACTTTTCTTAATCAAATTTTCTTAATAGTATTTTAGGTTCAAAATGTTTATTCGTCTCCATAAAAAGAAAAAAGATGGAAAATATATATATATATGTAGTCATGGTAGATTTCAAACGTGCCTTGGTAGGTCTGTCACAATTTTGTAAAATTCTGCTTGTGAATTTGTGCAGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGGTGATGCCCGATGTCTTTATTCTTTCCTGTTGTTACTGATCATGATTCATTTTCTGGATGGTTCAGGGCTATTTGTACGTATGTACACTGTAAATTCCATTCACACGCGTTAACATGTGATTTATGCAACAAAACTATTTTAAAATCTACCTCTTTCTGCGATAAATAAAAATTTGCTGTTCTCTAATCTCTTTGTTTAAAGAAAATTTACCATGCGACTGAACCTGCATTCAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATTACTCAGAAATGTGAGTTTTTACATACCAGCTTTTTGACTTGCTTGCCCTTTTTTCTTTTCTTATTATTTAGATAAGAAAAAGACATTCATTTGACAAATAAATGACAAAGAAGCAGGTTAAGCCAAAGTGTTATAAAAAAGGTTTTCAAATGGACAAGTTTTGGATGCAATAATTACAAGACTCAATATTGAAAGAACTCCCAAGAGTTTAAAATGCTGGCATATGTGGAAGCGAAAATAGAAGTGGTTGTAAATGTACTATTGTTTACATTAAATAAATTAATAAATAAATAAACTAGCTACACGATACTCCATAGGTAGATCAATCAAATATGGTTTATCATTAGGATTTAGGCAATATAGTATATCCGTTGCAAGTGTCAAGAAATTTACTTTTATTTAAAGAACACATGCGATTGGAAGACTGAATTTTGTCTGGTTATCTGTCATAGTTATTCTTTTCCACAGTTCATATAACTGATATATGGCTAATAACATTATTTTGGTATAGGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGGTTGGAGTACTTTTAAATATTTTCCGAAAGATAGGTTTGAGCTGTATTTTATAACTCCATCTGATCATATGTTATTCGTTTGCCAGTGAAGTACCTTCTAATGGAGAGGAAGGCAATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTCATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCTAAAGGTTTTTTTTTTTCTTTTTTCTTTTTTCTTTTTTCTCTTTAATGTTTCTGAACTTCATTAAGTTGCAAAATTTCTCTTCCTTTCTTCTTTTCTTAGCCTTTTCTTTTTGGTTATAAAAAATCGTAAATTTTCATTAATTTTTTGAGAAAATGATACGAAAAACTTCCTCAAAAGTAACTCACAAAAAACCACTTCATCAAGACTGCAAGAATTAATAACAGAAGGGTAGAAATTTAGCAAATGGCCCAAATCTAATCTTAATCTCTTCTCTTCTCGCTACAATTTATAAGGTTTCCTTTCATCGAACTCCCTGTTGGCAGCTTTTTGTTTTACTCCCACAACATTTGCCTTTTCCCGGTGGTTCAACTGTTCAACTGTTCTCCCAGTTAGCGGAGTATATACATAAAGCCTGTTTAAATTTAAACCTCCAGCCTTTGACTGAAGGGGCGGAGAAAAATGAGTTGATCCTTTTGTTAGGAATCACGACCCTCCACACTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTAGGCTTCCCCAAAAGGCCGGTACGAATGGAGATGTATTTCTTACTTATAAACTCGTGACCAACCCCTTAATTAGCTAATGTGAGACTCCTCTTCCGACAATCCTCAACACCTTTTAATCATTATTCACATATAGAGGACACTAGTCTGGAAGCAAAACCATCTAGAGCAGAACCGTTCTCGAACGGTACCTACATTTTCTCCTACCATCCATAGCCTAAAAAAAGAGAGAGTGATAGAGAGAGAGAGAGAATGTCTGCCCGTTCAGAATTCCAGATACATGGATGCATGAATTGCATGGTAGGAAGATATTACTTGCCAACACCTAACGTATGGGAAAAATCATGCTTTTTTTGAAGCTTGCTATAATTATCTGTAAATTGGAATAGAGTTGAACTATATGCCTTGGACTTTTGTTCATTCTTTCATATAGAGTACAATTCTCAGCCACATGTGATGATATTTTCATTACTTTTCATTCGGTATATTTGTAATTTTCATTGCATTTACACTATTCAATTACCTTTTAGCTGAAGCTGTCGGGTTGGAAGACAGATCGTCTACTATCTCCTTCTGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAACTTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGGTACCCACTAATATAAACTGTTTCAAATTCAGACACTCTCAGTGGCATATTCACAGTATTGGTTGATACTCCCTGCTTGTGAATGGTGCAAACCTGAAAAGTATTGTCAATATGCTGTTTATGGCCCTATAGTTTTTAAACAGCACCATGCAAATCTGCTTATGACCTTGTAGTTTTTAATGAACCTTATAAACAGCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGACCTTATAGTTTATAATGAACCTTATGAACAGCACTTATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTCTGATCTTACAGTTTTTAATGAACCTTATGAACATCACTCATTTGATTATGCTTTCTGATATTCTGCCACTGGATTCATTATGACCTTATAGTTTTTAATGAACCTTATGAACAACACTCATTTGATAATGCTTTCTGATATTCTGCCACTGGATTCATTATGACCTTATAGTTTTTAATGAACCTTATGAACAACACTCATTTGATAATGCTTTCTGATATTCTGCCACTGGATTCATTATGACCTTATAGTTTTTAATGAACCTTATGAACAACACTCATTTGATAATGCTTTCTGATATTCTGCCACTGGATTCATTATGACCTTATAGTTTTTAATGAACCTTATGAACAACACTCATTTGATAATGCTTTCTGATATTCTGCCACTGGATTCATTATGACCTTATAGTTTTTAATGAACCTTATGAACAACACTCATTTGATAATGCTTTCTGATATTCTGCCCCTGGATTCATTCTGACCTTATAGTTTATAATGAACCTTATGAACAGCAATCATTTGATTATGCTTTCTGATATTCTGCCACCGGTTGTTTCTTTTTGATAATACTTGGCTGCAAATTTTTGAAAAGCATACATTAATTGTTCTTGCAATTATGCATTTAGGCTTGCAGTTAAATATAAAACAGGTTAGAAGCTCTCTCTAAGAAGAAAAACTCATTCAAAGTGCTGCGGGCAGTGGCAAGAGCTGATCAATATTCCTGCAGAAAATCAGGCTTACATTTATGCTCAATCCTGTAGTATTAAGAATTAGAAAACCATGACCAATTTTTATATTCAAGAGCGGCTATCTTTTACTCATTTCTTTTCGAGTCTTTGAATCAGCTTGAAACCGACCGATATCGTTGAACTATATTCATATTAGTCATAAATCAAGTTTTTATGCATCGTAATAATTTGTGATATTTCTTTCGCTATAAAGGATAGGTTCCAAAATTCAATCCGTGAAGAATCGATTGTTTTCGAAGGACGTCTTTGCTATTT

mRNA sequence

ATGGATCGGAAAAATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATTCAAAGGCAATGTTCTGATTCCCTTCCCATCTCAGATTCCATTCACCACTTTTGGAAATTTGCGATTGATATTTCCTCTTTCTTTTTTTCAATCTATAGATCTGGTTCTCGTTTCAAAATCGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGTGGTTTTTGAGGGATTTAACTGGAATGGTTGGAGGTATCTTATTCACATTTTACCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTTGATGGACCTCGTTTCCCCCCTGTTTCCTTCAGCATTTATGCTTATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCACCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTCCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGGTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATTACTCAGAAATGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGTGAAGTACCTTCTAATGGAGAGGAAGGCAATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTCATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCTAAAGCTGAAGCTGTCGGGTTGGAAGACAGATCGTCTACTATCTCCTTCTGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAACTTGACTAAACCTCAGTGGTCACTAACCATAAAAGAGCAGCACAAGGAGGCTTGCAGTTAAATATAAAACAGGTTAGAAGCTCTCTCTAAGAAGAAAAACTCATTCAAAGTGCTGCGGGCAGTGGCAAGAGCTGATCAATATTCCTGCAGAAAATCAGGCTTACATTTATGCTCAATCCTGTAGTATTAAGAATTAGAAAACCATGACCAATTTTTATATTCAAGAGCGGCTATCTTTTACTCATTTCTTTTCGAGTCTTTGAATCAGCTTGAAACCGACCGATATCGTTGAACTATATTCATATTAGTCATAAATCAAGTTTTTATGCATCGTAATAATTTGTGATATTTCTTTCGCTATAAAGGATAGGTTCCAAAATTCAATCCGTGAAGAATCGATTGTTTTCGAAGGACGTCTTTGCTATTT

Coding sequence (CDS)

ATGGATCGGAAAAATCCTCAATCAGAAGTGTTCTTGGAGGAATGGAATGGTTCTTCATTATCGGAGCTTCGGAAGACTGCCACCATAACTGTTTCTCCTTCCCTGTCCATTCAAAGGCAATGTTCTGATTCCCTTCCCATCTCAGATTCCATTCACCACTTTTGGAAATTTGCGATTGATATTTCCTCTTTCTTTTTTTCAATCTATAGATCTGGTTCTCGTTTCAAAATCGGGTTTCCTAGTAGTGTGACCCCCGATTATGTTCCTTTTCAAATATGGGACTCATTGCAGTGGTTTTTGAGGGATTTAACTGGAATGGTTGGAGGTATCTTATTCACATTTTACCAGGGATCAAATCTGGACAGCAATGCCAAAATGTGGCGCTTGGTTGCAGATTTCATGAATGATCTTGGTATGTTGATGGACCTCGTTTCCCCCCTGTTTCCTTCAGCATTTATGCTTATCGTTTGCTTGGGGAGCCTGTCAAGATCATTCACCGGTGTGGCAAGTGGAGCTACTAGAGCTGCTTTAACACAACATTTTGCCCTTCAGAATAATGCTGCTGATATATCTGCCAAGGAAGGAAGTCAAGAAACAGTAGCAACAATGGTAGGCATGGCGATTGGTATGCTCCTTGCTCGTATTACCATGGGATGCCCACTGGCCATCTGGGTTTCTTTTCTATCTCTCACGTTGTTCCATATGTACGCAAATTACAAGGCTGTTTGCTGCCTTTCCTTGACTTCACTCAACCCTCAGAGGTGTTCAATTGCTTTGCAGCATTTTATTCAGACTGGCCAAGTTCTCTCTCCTCAACAGGTTTCTAAGATGGAGCATGTTTTACCCACATGGGTTTCTTCATGGAGTTTAAGGAGTATTAAGTTAATCCATACACGTGTAAGATTAGGAGAGAGGATCTCTTCACTTCATTACTCAGAAATGAAGGAGCTGTTGCAATTGGCAGGTGCCAATAGTAACAAAGTGAAGTACCTTCTAATGGAGAGGAAGGCAATTATCTGTGTTATTGTGCGAAAAGATGCAACTGCTCATGACATCTTCCAATCATTCTTTCATGCACTTGTTACGGCTTATGTTCCTGATCAGGCGTCTAGGCATTTGGAAAGCCTGTCGTGGATGGACAAACATTATGAAGATTTTATTCTAAAGCTGAAGCTGTCGGGTTGGAAGACAGATCGTCTACTATCTCCTTCTGTTTGTTGGAGAGCCAACTGGGTCTGCAGTCCCAGAGATGAGAAACTTGACTAA

Protein sequence

MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAIDISSFFFSIYRSGSRFKIGFPSSVTPDYVPFQIWDSLQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLESLSWMDKHYEDFILKLKLSGWKTDRLLSPSVCWRANWVCSPRDEKLD

Homology

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BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot
Match: Q84JB8 (Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 2.8e-129
Identity = 254/448 (56.70%), Postives = 311/448 (69.42%), Query Frame = 0


Query: 10  VFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAIDISSFFFSIY 69
           + LEEWNGSS ++L KTATIT S SLSIQR        ++  +H W+  +          
Sbjct: 12  ITLEEWNGSSSTKLFKTATITASSSLSIQRS-------ANRFNHVWRRVLQ--------- 71

Query: 70  RSGSRFKIGFPSSVTPDYVPFQIWDSL--------------------------------- 129
              +    GFP SVTPDYV FQ+WD+L                                 
Sbjct: 72  ---AFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMMLSTQALLSAIGVGEKSATVIGAT 131

Query: 130 -QWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLI 189
            QWFLRD TGM+GGILFTFYQGSNLDSNAKMWRLVAD MND+GMLMDL+SPLFPSAF+++
Sbjct: 132 FQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVV 191

Query: 190 VCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARI 249
           VCLGSLSRSFTGVASGATRAALTQHFALQ+NAADISAKEGSQET+ATM+GM++GMLLAR 
Sbjct: 192 VCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARF 251

Query: 250 TMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVS 309
           T G P+AIW+SFLSLT+FHMYANY+AV CL L SLN +R SI L HFIQTGQVLSP+QVS
Sbjct: 252 TSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVS 311

Query: 310 KMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNK-VKYLLME 369
            ME VLP W +S    + K +H RV+LG R+SSL   +M +LL   GA+S K  KYLL  
Sbjct: 312 SMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLLAH 371

Query: 370 RKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQA-SRHLESLSWMDKHYEDFILKLKLS 422
            K  + VI+ KD+   D+ +S+ HA+V A + +++ S + E  +W+DKHY++ + KL+  
Sbjct: 372 IKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEAWIDKHYDELLHKLRSG 431

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot
Match: Q91W34 (RUS family member 1 OS=Mus musculus OX=10090 GN=Rusf1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-54
Identity = 134/401 (33.42%), Postives = 205/401 (51.12%), Query Frame = 0


Query: 78  GFPSSVTPDYVPFQIWDSLQ----------------------------------WFLRDL 137
           GFP SV+PDY+P+Q+WDS+Q                                  W ++D 
Sbjct: 79  GFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDS 138

Query: 138 TGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSR 197
           TGM+G I+  +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   +L++
Sbjct: 139 TGMLGRIILAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPMYPIFFTMTVSTSNLAK 198

Query: 198 SFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAI 257
              GVA GATRAALT H A +NN AD+SAK+ SQETV  + G+ + +L+  +   CP   
Sbjct: 199 CIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCPSLS 258

Query: 258 WVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPT 317
              F+ LT  H+YANY+AV  L L +LN  R  + L+HF+Q G+VL P   ++ME   P 
Sbjct: 259 LGCFVLLTALHIYANYRAVRALVLETLNESRLQLVLEHFLQRGEVLEPASANQME---PL 318

Query: 318 WVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVKYLLMERKA--IICV 377
           W   W   S+ L    V L   +SS+  SE+K+L++      +   YLL   K+   + V
Sbjct: 319 WTGFWPSLSLSL---GVPLHHLVSSV--SELKQLVE-----GHHEPYLLCWNKSRNQVQV 378

Query: 378 IVRKDATAHDIFQSFFHALV-------------TAYVPDQASRHLESLSW---------M 421
            + ++A    + ++  H L+              A +  Q     +  SW         +
Sbjct: 379 ALSQEAGPETVLRAATHGLILGALQEDGPLPGELAELRHQVQADPKKESWILVRETHQVL 438

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot
Match: Q5R8F6 (RUS family member 1 OS=Pongo abelii OX=9601 GN=Rusf1 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.6e-52
Identity = 131/399 (32.83%), Postives = 201/399 (50.38%), Query Frame = 0


Query: 78  GFPSSVTPDYVPFQIWDSLQ----------------------------------WFLRDL 137
           GFP SV+PDY+P+Q+WDS+Q                                  W ++D 
Sbjct: 81  GFPDSVSPDYLPYQLWDSVQAFASGLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDS 140

Query: 138 TGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSR 197
           TGM+G I+F +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   +L++
Sbjct: 141 TGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAK 200

Query: 198 SFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAI 257
               VA GATRAALT H A +NN AD+SAK+ SQET+  +VG+ + +L+  +  GCP   
Sbjct: 201 CIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLVGLLVSLLMLPLVSGCPGFS 260

Query: 258 WVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPT 317
              F  LT  H+YANY+AV  L + +LN  R  + L+H++Q G+VL+P   ++ME   P 
Sbjct: 261 LGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLNPTAANRME---PL 320

Query: 318 WVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVKYLLMERKAIICVIV 377
           W   W   S+ L    V L   +SS+      EL QL   +         + +  + V++
Sbjct: 321 WTGFWPAPSLSL---GVPLHRLVSSVF-----ELQQLVEGHQEPYLLCWDQSRNQVQVVL 380

Query: 378 RKDATAHDIFQSFFHALVTAYVPDQA--SRHLESL-----------SW---------MDK 421
            + A    I ++  H L+   +         LE L           SW         +D 
Sbjct: 381 NQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVQAGPKKESWVIVKETHEVLDM 440

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot
Match: Q499P8 (RUS family member 1 OS=Rattus norvegicus OX=10116 GN=Rusf1 PE=2 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 4.7e-52
Identity = 132/401 (32.92%), Postives = 204/401 (50.87%), Query Frame = 0


Query: 78  GFPSSVTPDYVPFQIWDSLQ----------------------------------WFLRDL 137
           GFP SV+PDY+ +Q+WDS+Q                                  W ++D 
Sbjct: 79  GFPDSVSPDYLQYQLWDSVQAFASSLSGSLATQAVLQGLGVGNAKASVSAATSTWLVKDS 138

Query: 138 TGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSR 197
           TGM+G I+F +++GS LD NAK WRL AD +ND  M +++++P++P  F + V   +L++
Sbjct: 139 TGMLGRIIFAWWKGSKLDCNAKQWRLFADILNDTAMFLEIMAPMYPIFFTMTVSTSNLAK 198

Query: 198 SFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAI 257
              GVA GATRAALT H A +NN AD+SAK+ SQETV  + G+ + +L+  +   C    
Sbjct: 199 CIVGVAGGATRAALTMHQARRNNMADVSAKDSSQETVVNLAGLLVSLLMLPLVSDCLSLS 258

Query: 258 WVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPT 317
              F+ LT  H+YANY+AV  L L +LN  R  + L+HF+Q G+VL P   ++ME   P 
Sbjct: 259 LGCFILLTALHIYANYRAVRALVLETLNESRLQLVLKHFLQRGEVLEPASANQME---PL 318

Query: 318 WVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVKYLLM--ERKAIICV 377
           W   W   S+ L    V L   +SS+  SE+K+L++      ++  YLL   + +  + V
Sbjct: 319 WTGFWPSLSLSL---GVPLHHLVSSV--SELKQLVE-----GHQEPYLLCWNQSQNQVQV 378

Query: 378 IVRKDATAHDIFQSFFHALV-------------TAYVPDQASRHLESLSW---------M 421
            + + A    + ++  H L+              A + D      ++ SW         +
Sbjct: 379 ALSQVAGPETVLRAATHGLILGALQEDGPLPGELAELRDMVQAGPKNESWILVRETHQVL 438

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot
Match: Q96GQ5 (RUS family member 1 OS=Homo sapiens OX=9606 GN=RUSF1 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 6.1e-52
Identity = 130/399 (32.58%), Postives = 199/399 (49.87%), Query Frame = 0


Query: 78  GFPSSVTPDYVPFQIWDSLQ----------------------------------WFLRDL 137
           GFP SV+PDY+P+Q+WDS+Q                                  W ++D 
Sbjct: 81  GFPDSVSPDYLPYQLWDSVQAFASSLSGSLATQAVLLGIGVGNAKATVSAATATWLVKDS 140

Query: 138 TGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSR 197
           TGM+G I+F +++GS LD NAK WRL AD +ND+ M +++++P++P  F + V   +L++
Sbjct: 141 TGMLGRIVFAWWKGSKLDCNAKQWRLFADILNDVAMFLEIMAPVYPICFTMTVSTSNLAK 200

Query: 198 SFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAI 257
               VA GATRAALT H A +NN AD+SAK+ SQET+  + G+ + +L+  +  GCP   
Sbjct: 201 CIVSVAGGATRAALTVHQARRNNMADVSAKDSSQETLVNLAGLLVSLLMLPLVSGCPGFS 260

Query: 258 WVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPT 317
              F  LT  H+YANY+AV  L + +LN  R  + L+H++Q G+VL P   ++ME   P 
Sbjct: 261 LGCFFFLTALHIYANYRAVRALVMETLNEGRLRLVLKHYLQRGEVLDPTAANRME---PL 320

Query: 318 WVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVKYLLMERKAIICVIV 377
           W   W   S+ L    V L   +SS+      EL QL   +         + +  + V++
Sbjct: 321 WTGFWPAPSLSL---GVPLHRLVSSVF-----ELQQLVEGHQESYLLCWDQSQNQVQVVL 380

Query: 378 RKDATAHDIFQSFFHALVTAYVPDQA--SRHLESL-----------SW---------MDK 421
            + A    I ++  H L+   +         LE L           SW         +D 
Sbjct: 381 NQKAGPKTILRAATHGLMLGALQGDGPLPAELEELRNRVRAGPKKESWVVVKETHEVLDM 440

[Close]

BLAST of Cp4.1LG11g03870 vs. NCBI nr
Match: XP_023546684.1 (protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546686.1 protein root UVB sensitive 3 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023546687.1 protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546688.1 protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546689.1 protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546690.1 protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023546691.1 protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 729 bits (1883), Expect = 2.81e-263
Identity = 390/467 (83.51%), Postives = 390/467 (83.51%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. NCBI nr
Match: XP_022962049.1 (protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962050.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962051.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962052.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962053.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962054.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962055.1 protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962056.1 protein root UVB sensitive 3 [Cucurbita moschata])

HSP 1 Score: 719 bits (1856), Expect = 3.64e-259
Identity = 383/467 (82.01%), Postives = 389/467 (83.30%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLH+SEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERK+IICVIVRKDATA+DIFQSFFHALVTAYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. NCBI nr
Match: KAG7029574.1 (Protein root UVB sensitive 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 715 bits (1846), Expect = 1.21e-257
Identity = 381/467 (81.58%), Postives = 388/467 (83.08%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRK+PQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKHPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLH+SEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERK+IICVIVRKDATA+DIFQSFFHALV AYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. NCBI nr
Match: XP_022997148.1 (protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997150.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997151.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997152.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997153.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997154.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997155.1 protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997156.1 protein root UVB sensitive 3 [Cucurbita maxima])

HSP 1 Score: 715 bits (1845), Expect = 1.72e-257
Identity = 383/467 (82.01%), Postives = 387/467 (82.87%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSL +SEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLSHSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERKAII VIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKAIIRVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. NCBI nr
Match: KAG6598638.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 715 bits (1846), Expect = 3.42e-248
Identity = 381/467 (81.58%), Postives = 388/467 (83.08%), Query Frame = 0


Query: 1    MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
            MDRK+PQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 641  MDRKHPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 700

Query: 61   ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                     RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 701  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 760

Query: 121  -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                   WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 761  TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 820

Query: 181  NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
            NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 821  NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 880

Query: 241  GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
            GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 881  GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 940

Query: 301  CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
            CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLH+SEM
Sbjct: 941  CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEM 1000

Query: 361  KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
            KELLQLAGANSNKVKYLLMERK+IICVIVRKDATA+DIFQSFFHALV AYVPDQASRHLE
Sbjct: 1001 KELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVAAYVPDQASRHLE 1060

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL
Match: A0A6J1HC09 (protein root UVB sensitive 3 OS=Cucurbita moschata OX=3662 GN=LOC111462628 PE=3 SV=1)

HSP 1 Score: 719 bits (1856), Expect = 1.76e-259
Identity = 383/467 (82.01%), Postives = 389/467 (83.30%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLH+SEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHHSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERK+IICVIVRKDATA+DIFQSFFHALVTAYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKSIICVIVRKDATANDIFQSFFHALVTAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL
Match: A0A6J1KD16 (protein root UVB sensitive 3 OS=Cucurbita maxima OX=3661 GN=LOC111492141 PE=3 SV=1)

HSP 1 Score: 715 bits (1845), Expect = 8.33e-258
Identity = 383/467 (82.01%), Postives = 387/467 (82.87%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ                      
Sbjct: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRFKI            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFKIVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMIGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATMVGMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSL +SEM
Sbjct: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLSHSEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELLQLAGANSNKVKYLLMERKAII VIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE
Sbjct: 361 KELLQLAGANSNKVKYLLMERKAIIRVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL
Match: A0A5A7VCN7 (Protein root UVB sensitive 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00720 PE=3 SV=1)

HSP 1 Score: 630 bits (1624), Expect = 4.08e-224
Identity = 342/447 (76.51%), Postives = 362/447 (80.98%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           M RK  QSEV LEEWNGSS SELRKTA ++ SPSL IQR     +P+SDS    W     
Sbjct: 1   MARKIFQSEVVLEEWNGSSSSELRKTAILSASPSLLIQRHYL--VPVSDS----WG---- 60

Query: 61  ISSFFFSIYRSGSRFKIGFPSSVTPDYVPFQIWDSLQ----------------------- 120
                  +YR   R   GFPSSVTPDYVPFQIWDSLQ                       
Sbjct: 61  -DDSLTPLYR---RQACGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGE 120

Query: 121 -----------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSP 180
                      WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSP
Sbjct: 121 QSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSP 180

Query: 181 LFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGM 240
           LFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATM+GM
Sbjct: 181 LFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMIGM 240

Query: 241 AIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTG 300
           AIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQH+IQT 
Sbjct: 241 AIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHYIQTA 300

Query: 301 QVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSN 360
           QVLSPQQVSKMEHVLP W SSWSLRSIKLIHTRVRLG R+SSLH++E+KELL LAGAN+N
Sbjct: 301 QVLSPQQVSKMEHVLPAWASSWSLRSIKLIHTRVRLGVRVSSLHHTEIKELLHLAGANNN 360

Query: 361 --KVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLESLSWMDKHYE 411
             K KYLL+ER+  I VIV+KDATA+DIFQSF HALV AYVPDQ SRHLES+SWMDKHYE
Sbjct: 361 DKKEKYLLVEREGTISVIVQKDATANDIFQSFVHALVMAYVPDQESRHLESMSWMDKHYE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL
Match: A0A1S3BDL5 (protein root UVB sensitive 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488468 PE=3 SV=1)

HSP 1 Score: 625 bits (1611), Expect = 3.23e-222
Identity = 339/459 (73.86%), Postives = 358/459 (78.00%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           M RK  QSEV LEEWNGSS SELRKTA ++ SPSL IQ                      
Sbjct: 1   MARKIFQSEVVLEEWNGSSSSELRKTAILSASPSLLIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRF++            GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFRLVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVADFM
Sbjct: 121 TQALLSAIGVGEQSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADFM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATM+GMAIGMLLARITMGCPLAIW+SFLSLTLFHMYANYKAVCCLSLTSLNPQR
Sbjct: 241 GSQETVATMIGMAIGMLLARITMGCPLAIWLSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIALQH+IQT QVLSPQQVSKMEHVLP W SSWSLRSIKLIHTRVRLG R+SSLH++E+
Sbjct: 301 CSIALQHYIQTAQVLSPQQVSKMEHVLPAWASSWSLRSIKLIHTRVRLGVRVSSLHHTEI 360

Query: 361 KELLQLAGANSN--KVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRH 411
           KELL LAGAN+N  K KYLL+ER+  I VIV+KDATA+DIFQSF HALV AYVPDQ SRH
Sbjct: 361 KELLHLAGANNNDKKEKYLLVEREGTISVIVQKDATANDIFQSFVHALVMAYVPDQESRH 420

[Close]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL
Match: A0A6J1BP93 (protein root UVB sensitive 3 OS=Momordica charantia OX=3673 GN=LOC111004553 PE=3 SV=1)

HSP 1 Score: 622 bits (1603), Expect = 5.53e-221
Identity = 335/467 (71.73%), Postives = 359/467 (76.87%), Query Frame = 0


Query: 1   MDRKNPQSEVFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAID 60
           M  KN Q EV LEEWNGSS SELRKTATI+ SPSLSIQ                      
Sbjct: 1   MGGKNLQPEVVLEEWNGSSSSELRKTATISASPSLSIQ---------------------- 60

Query: 61  ISSFFFSIYRSGSRFKI------------GFPSSVTPDYVPFQIWDSLQ----------- 120
                    RSGSRF+             GFPSSVTPDYVPFQIWDSLQ           
Sbjct: 61  ---------RSGSRFRHVGRRFFDAFVPEGFPSSVTPDYVPFQIWDSLQGLSTYIRTMLS 120

Query: 121 -----------------------WFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFM 180
                                  WFLRDLTGM+GGILFTFYQGSNLDSNAKMWRLVAD M
Sbjct: 121 TQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLM 180

Query: 181 NDLGMLMDLVSPLFPSAFMLIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240
           NDLGMLMDLVSPLFPSAFM IVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE
Sbjct: 181 NDLGMLMDLVSPLFPSAFMPIVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKE 240

Query: 241 GSQETVATMVGMAIGMLLARITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQR 300
           GSQETVATM+GMAIGMLLA ITMG PLAIW+ FLSLTLFHMYANYKAVCCL+LTSLNPQR
Sbjct: 241 GSQETVATMIGMAIGMLLAHITMGFPLAIWLCFLSLTLFHMYANYKAVCCLALTSLNPQR 300

Query: 301 CSIALQHFIQTGQVLSPQQVSKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEM 360
           CSIAL+HF+ TG+VLSP+QVSKMEHVLP+W SSWS+RSI + HTRV+LG RISSLH++EM
Sbjct: 301 CSIALRHFVLTGKVLSPEQVSKMEHVLPSWASSWSVRSITMAHTRVKLGARISSLHHTEM 360

Query: 361 KELLQLAGANSNKVKYLLMERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRHLE 420
           KELL+LAGAN+NK KYLL+ERK II V+  KDATA+DIFQSF HALV A VPDQ SRHLE
Sbjct: 361 KELLRLAGANNNKGKYLLVERKGIISVVAHKDATANDIFQSFVHALVMASVPDQESRHLE 420

[Close]

BLAST of Cp4.1LG11g03870 vs. TAIR 10
Match: AT1G13770.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 463.4 bits (1191), Expect = 2.0e-130
Identity = 254/448 (56.70%), Postives = 311/448 (69.42%), Query Frame = 0


Query: 10  VFLEEWNGSSLSELRKTATITVSPSLSIQRQCSDSLPISDSIHHFWKFAIDISSFFFSIY 69
           + LEEWNGSS ++L KTATIT S SLSIQR        ++  +H W+  +          
Sbjct: 12  ITLEEWNGSSSTKLFKTATITASSSLSIQRS-------ANRFNHVWRRVLQ--------- 71

Query: 70  RSGSRFKIGFPSSVTPDYVPFQIWDSL--------------------------------- 129
              +    GFP SVTPDYV FQ+WD+L                                 
Sbjct: 72  ---AFVPEGFPGSVTPDYVGFQLWDTLQGLSTYTKMMLSTQALLSAIGVGEKSATVIGAT 131

Query: 130 -QWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLI 189
            QWFLRD TGM+GGILFTFYQGSNLDSNAKMWRLVAD MND+GMLMDL+SPLFPSAF+++
Sbjct: 132 FQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIVV 191

Query: 190 VCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARI 249
           VCLGSLSRSFTGVASGATRAALTQHFALQ+NAADISAKEGSQET+ATM+GM++GMLLAR 
Sbjct: 192 VCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLARF 251

Query: 250 TMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVS 309
           T G P+AIW+SFLSLT+FHMYANY+AV CL L SLN +R SI L HFIQTGQVLSP+QVS
Sbjct: 252 TSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQVS 311

Query: 310 KMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNK-VKYLLME 369
            ME VLP W +S    + K +H RV+LG R+SSL   +M +LL   GA+S K  KYLL  
Sbjct: 312 SMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLLAH 371

Query: 370 RKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQA-SRHLESLSWMDKHYEDFILKLKLS 422
            K  + VI+ KD+   D+ +S+ HA+V A + +++ S + E  +W+DKHY++ + KL+  
Sbjct: 372 IKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEAWIDKHYDELLHKLRSG 431

[Close]

BLAST of Cp4.1LG11g03870 vs. TAIR 10
Match: AT1G13770.2 (Protein of unknown function, DUF647 )

HSP 1 Score: 417.5 bits (1072), Expect = 1.2e-116
Identity = 215/329 (65.35%), Postives = 262/329 (79.64%), Query Frame = 0


Query: 95  SLQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFML 154
           + QWFLRD TGM+GGILFTFYQGSNLDSNAKMWRLVAD MND+GMLMDL+SPLFPSAF++
Sbjct: 25  TFQWFLRDFTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDIGMLMDLLSPLFPSAFIV 84

Query: 155 IVCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLAR 214
           +VCLGSLSRSFTGVASGATRAALTQHFALQ+NAADISAKEGSQET+ATM+GM++GMLLAR
Sbjct: 85  VVCLGSLSRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETMATMMGMSLGMLLAR 144

Query: 215 ITMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQV 274
            T G P+AIW+SFLSLT+FHMYANY+AV CL L SLN +R SI L HFIQTGQVLSP+QV
Sbjct: 145 FTSGNPMAIWLSFLSLTVFHMYANYRAVRCLVLNSLNFERSSILLTHFIQTGQVLSPEQV 204

Query: 275 SKMEHVLPTWVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNK-VKYLLM 334
           S ME VLP W +S    + K +H RV+LG R+SSL   +M +LL   GA+S K  KYLL 
Sbjct: 205 SSMEGVLPLWATSLRSTNSKPLHKRVQLGVRVSSLPRLDMLQLLNGVGASSYKNAKYLLA 264

Query: 335 ERKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQA-SRHLESLSWMDKHYEDFILKLKL 394
             K  + VI+ KD+   D+ +S+ HA+V A + +++ S + E  +W+DKHY++ + KL+ 
Sbjct: 265 HIKGNVSVILHKDSKPADVLKSYIHAIVLANLMEKSTSFYSEGEAWIDKHYDELLHKLRS 324

Query: 395 SGWKTDRLLSPSVCWRANWVCSPRDEKLD 422
            GWKT+RLLSPS+ WRANW+      K D
Sbjct: 325 GGWKTERLLSPSITWRANWISHTSAAKFD 353

[Close]

BLAST of Cp4.1LG11g03870 vs. TAIR 10
Match: AT3G45890.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-27
Identity = 88/328 (26.83%), Postives = 154/328 (46.95%), Query Frame = 0


Query: 78  GFPSSVTPDYVPFQIWDSLQ---------------------------------WFLRDLT 137
           GFP+SVT DY+ + +W  +Q                                 W L+D  
Sbjct: 202 GFPNSVTSDYLDYSLWRGVQGIASQISGVLATQSLLYAVGLGKGAIPTAAAINWVLKDGI 261

Query: 138 GMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLIVCLGSLSRS 197
           G +  I+ + Y G + D + K WRL AD + +    M++++P+FP  F++I       RS
Sbjct: 262 GYLSKIMLSKY-GRHFDVHPKGWRLFADLLENAAFGMEMLTPVFPQFFVMIGAAAGAGRS 321

Query: 198 FTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARITMGCPLAIW 257
              +   ATR+     FA Q N A++ AK  +Q  V+  VG+ +G+++A           
Sbjct: 322 AAALIQAATRSCFNAGFASQRNFAEVIAKGEAQGMVSKSVGILLGIVVANCIGTSTSLAL 381

Query: 258 VSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVSKMEHVLPT- 317
            +F  +T  HMY N K+  C+ L +LNP R S+    ++ +GQ    ++V+  E + PT 
Sbjct: 382 AAFGVVTTIHMYTNLKSYQCIQLRTLNPYRASLVFSEYLISGQAPLIKEVNDEEPLFPTV 441

Query: 318 --------------WVSSWSLRSIKLIHTRVRLGERISSLHYSEMKELLQLAGANSNKVK 358
                          +SS +  +   I  R++LG ++S + +++ +E + L     N+  
Sbjct: 442 RFSNMKSPEKLQDFVLSSEAKAAAADIEERLQLGSKLSDVIHNK-EEAIALFDLYRNE-G 501

[Close]

BLAST of Cp4.1LG11g03870 vs. TAIR 10
Match: AT2G31190.1 (Protein of unknown function, DUF647 )

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-22
Identity = 87/315 (27.62%), Postives = 159/315 (50.48%), Query Frame = 0


Query: 96  LQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLI 155
           + W L+D    VG ++ +   G+ +DS  K WR++AD + DLG  ++LVSPL P  F+ +
Sbjct: 125 VSWILKDGMQHVGKLICS-NLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEM 184

Query: 156 VCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARI 215
             LG+ ++    VA+ ATR  +   FA + N +DI AK  +  T+  + G+  G+ LA  
Sbjct: 185 AGLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLAST 244

Query: 216 TMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVS 275
                    V    L++ H+Y+  + +  + + +LNPQR ++ + +F++TG+V SP  + 
Sbjct: 245 ICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLR 304

Query: 276 KMEHVLPTWVSSWSLRSIKLIHTRVRLGERI-SSLHYSEMKELLQLAGANSNKVKYLLME 335
             E ++      +  R I+     V++G  +  ++  SE++ L Q+      + K+LL  
Sbjct: 305 FQEDLM------FPERPIQ-DAGNVKVGRALHKAVKPSEVQRLKQV----FVEEKFLLSH 364

Query: 336 RKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRH--------LESLSWMDKHYEDF 395
            K+   +++  DAT  D  + +   LV AYV      +         ++   M+  +  F
Sbjct: 365 GKSWTDMVLEHDATGEDALRGW---LVAAYVKSMTKIYNDPDDIILQDAYDKMNDVFNPF 424

Query: 396 ILKLKLSGWKTDRLL 402
           + +++  GW TDR L
Sbjct: 425 LSQVQAKGWYTDRFL 424

[Close]

BLAST of Cp4.1LG11g03870 vs. TAIR 10
Match: AT2G31190.2 (Protein of unknown function, DUF647 )

HSP 1 Score: 104.0 bits (258), Expect = 3.0e-22
Identity = 87/315 (27.62%), Postives = 159/315 (50.48%), Query Frame = 0


Query: 96  LQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADFMNDLGMLMDLVSPLFPSAFMLI 155
           + W L+D    VG ++ +   G+ +DS  K WR++AD + DLG  ++LVSPL P  F+ +
Sbjct: 124 VSWILKDGMQHVGKLICS-NLGARMDSEPKRWRILADVLYDLGTGLELVSPLCPHLFLEM 183

Query: 156 VCLGSLSRSFTGVASGATRAALTQHFALQNNAADISAKEGSQETVATMVGMAIGMLLARI 215
             LG+ ++    VA+ ATR  +   FA + N +DI AK  +  T+  + G+  G+ LA  
Sbjct: 184 AGLGNFAKGMATVAARATRLPIYSSFAKEGNLSDIFAKGEAISTLFNVAGIGAGIQLAST 243

Query: 216 TMGCPLAIWVSFLSLTLFHMYANYKAVCCLSLTSLNPQRCSIALQHFIQTGQVLSPQQVS 275
                    V    L++ H+Y+  + +  + + +LNPQR ++ + +F++TG+V SP  + 
Sbjct: 244 ICSSMEGKLVVGSILSVVHVYSVVEQMRGVPINTLNPQRTALIVANFLKTGKVPSPPDLR 303

Query: 276 KMEHVLPTWVSSWSLRSIKLIHTRVRLGERI-SSLHYSEMKELLQLAGANSNKVKYLLME 335
             E ++      +  R I+     V++G  +  ++  SE++ L Q+      + K+LL  
Sbjct: 304 FQEDLM------FPERPIQ-DAGNVKVGRALHKAVKPSEVQRLKQV----FVEEKFLLSH 363

Query: 336 RKAIICVIVRKDATAHDIFQSFFHALVTAYVPDQASRH--------LESLSWMDKHYEDF 395
            K+   +++  DAT  D  + +   LV AYV      +         ++   M+  +  F
Sbjct: 364 GKSWTDMVLEHDATGEDALRGW---LVAAYVKSMTKIYNDPDDIILQDAYDKMNDVFNPF 423

Query: 396 ILKLKLSGWKTDRLL 402
           + +++  GW TDR L
Sbjct: 424 LSQVQAKGWYTDRFL 423

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g03870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JB8	2.8e-129	56.70	Protein root UVB sensitive 3 OS=Arabidopsis thaliana OX=3702 GN=RUS3 PE=2 SV=1	[more]
Q91W34	3.8e-54	33.42	RUS family member 1 OS=Mus musculus OX=10090 GN=Rusf1 PE=1 SV=1	[more]
Q5R8F6	1.6e-52	32.83	RUS family member 1 OS=Pongo abelii OX=9601 GN=Rusf1 PE=2 SV=1	[more]
Q499P8	4.7e-52	32.92	RUS family member 1 OS=Rattus norvegicus OX=10116 GN=Rusf1 PE=2 SV=1	[more]
Q96GQ5	6.1e-52	32.58	RUS family member 1 OS=Homo sapiens OX=9606 GN=RUSF1 PE=1 SV=2	[more]

BLAST of Cp4.1LG11g03870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546684.1	2.81e-263	83.51	protein root UVB sensitive 3 isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235466...	[more]
XP_022962049.1	3.64e-259	82.01	protein root UVB sensitive 3 [Cucurbita moschata] >XP_022962050.1 protein root U...	[more]
KAG7029574.1	1.21e-257	81.58	Protein root UVB sensitive 3 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022997148.1	1.72e-257	82.01	protein root UVB sensitive 3 [Cucurbita maxima] >XP_022997150.1 protein root UVB...	[more]
KAG6598638.1	3.42e-248	81.58	Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a...	[more]

BLAST of Cp4.1LG11g03870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HC09	1.76e-259	82.01	protein root UVB sensitive 3 OS=Cucurbita moschata OX=3662 GN=LOC111462628 PE=3 ...	[more]
A0A6J1KD16	8.33e-258	82.01	protein root UVB sensitive 3 OS=Cucurbita maxima OX=3661 GN=LOC111492141 PE=3 SV...	[more]
A0A5A7VCN7	4.08e-224	76.51	Protein root UVB sensitive 3 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3BDL5	3.23e-222	73.86	protein root UVB sensitive 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488468 ...	[more]
A0A6J1BP93	5.53e-221	71.73	protein root UVB sensitive 3 OS=Momordica charantia OX=3673 GN=LOC111004553 PE=3...	[more]

BLAST of Cp4.1LG11g03870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13770.1	2.0e-130	56.70	Protein of unknown function, DUF647	[more]
AT1G13770.2	1.2e-116	65.35	Protein of unknown function, DUF647	[more]
AT3G45890.1	1.8e-27	26.83	Protein of unknown function, DUF647	[more]
AT2G31190.1	3.0e-22	27.62	Protein of unknown function, DUF647	[more]
AT2G31190.2	3.0e-22	27.62	Protein of unknown function, DUF647	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006968	Root UVB sensitive family	PFAM	PF04884	DUF647	coord: 96..266 e-value: 1.8E-57 score: 194.7
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	RUS1 FAMILY PROTEIN C16ORF58	coord: 5..97
IPR006968	Root UVB sensitive family	PANTHER	PTHR12770	RUS1 FAMILY PROTEIN C16ORF58	coord: 96..421
None	No IPR available	PANTHER	PTHR12770:SF31	PROTEIN ROOT UVB SENSITIVE 3	coord: 5..97
None	No IPR available	PANTHER	PTHR12770:SF31	PROTEIN ROOT UVB SENSITIVE 3	coord: 96..421

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g03870.1	Cp4.1LG11g03870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane