Cp4.1LG11g03060 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g03060
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	ethylene-responsive transcription factor ERF003-like
Location	Cp4.1LG11: 1659772 .. 1660609 (-)
RNA-Seq Expression	Cp4.1LG11g03060
Synteny	Cp4.1LG11g03060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACAACCTCTCGCTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGCGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGTAAGTCCATTCTCCTAGCTTTAAACTAAGTCCATTCGTCATCCTTTTTGTTCACTGATTTTTGTTCATACAGGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAAGCCGCGCGCCTCATGTGCGGGCCGAGGGCGCGCACTAACTTCCCTTACGACGCCTCTCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTACACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACCGACACAATCCGAACCGATGTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAACCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAGCAGATGATCGATGAGCTACTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGACTGCAGGCTCAGCCCATTTGACATTCAACTATAAATCTCCGCCTCTAATTATGTACAAAATATCAATTAATTTAGCTAATTTAATTAACGACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCTAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACCATTTTCCATTACATAATTAGTA

mRNA sequence

CACAACCTCTCGCTCTCCGCTCACCATGCCCAGACCACAACAAAGATTCCGCGGCGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAAGCCGCGCGCCTCATGTGCGGGCCGAGGGCGCGCACTAACTTCCCTTACGACGCCTCTCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTACACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACCGACACAATCCGAACCGATGTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAACCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAGCAGATGATCGATGAGCTACTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGACTGCAGGCTCAGCCCATTTGACATTCAACTATAAATCTCCGCCTCTAATTATGTACAAAATATCAATTAATTTAGCTAATTTAATTAACGACCCGACTTTTGATCATTTGAGGTCATTATTTCCTCTTGGCTAACCCAGATTTGTTTCTCTCTGGTTTGGCCAATTGAGTGGCGGCGCCCCCATTTTATTTCATGTACCATTTTCCATTACATAATTAGTA

Coding sequence (CDS)

ATGCCCAGACCACAACAAAGATTCCGCGGCGTCCGACAGCGCCATTGGGGCTCATGGGTCTCCGAAATTCGCCATCCTTTATTGAAGACTAGAATTTGGTTGGGCACGTTCGAGACGGCCGAAGACGCAGCGCGCGCATACGACGAAGCCGCGCGCCTCATGTGCGGGCCGAGGGCGCGCACTAACTTCCCTTACGACGCCTCTCTGTCGCGCTCCTCATCTTCCCGCCTTCTCTCGGCTACTCTAACCGCCAAGCTACACCGCTGCTACATGGCCTCCTTGCAACTCACCAAGCAATCCTCCTCTGCCGCACGTCGCCCTCAAACCGACACAATCCGAACCGATGTTTCCGTGACATCCGGCATTGCTCCCGTCGGTGTGGAAACCGACGTGACGTCAACGAAGAAAGTCAAACTAGAGAGCGTGGATCGCGGGGAGCCGTTGGATGATGATCATATTCAGCAGATGATCGATGAGCTACTTGATTACGGCGGAATTGAGCTCCGTTCCGCCGCCGGACTGCAGGCTCAGCCCATTTGA

Protein sequence

MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTSGIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI

Homology

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-54
Identity = 116/182 (63.74%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TKQ+ +   + QT T R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIA--PVGVETDVTSTKKVKLESVDRG-----EPLDDDHIQQMIDELLDYGGIELRSAAG 176
           G+      +   VT T ++K E  +        PL++DHI+QMI+ELL YG IEL S   
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 179

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.9e-43
Identity = 99/164 (60.37%), Postives = 118/164 (71.95%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQR+RG RQRHWGSWVSEIRH +LKTRIW GTFE+AEDAARAYDEAARLMCG RAR
Sbjct: 1   MARPQQRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSS--SAAR-RPQTDTIRTDVS 120
           TNFPY+ + S+SSSS+LLSATL AKLHRCYMASLQ+T+ SS   A R     +     + 
Sbjct: 61  TNFPYNPNASQSSSSKLLSATLIAKLHRCYMASLQMTRPSSLPEAPRIIASPNNAVKGIG 120

Query: 121 VTSGIAPVGVETDVTST------KKVKLESVDRGEPLDDDHIQQ 156
             + + P   E +   T      KKVK+E   + +PL++DHI Q
Sbjct: 121 ADAMLLPKKREQEEQETGGNLDFKKVKVECSQQFKPLEEDHIAQ 164

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.6e-25
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC 90
           +                 +++S S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSSSAARRPQTDT 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDVSVTSGIAPVGVETDV-----TSTKKVKLESVDRGEPLDDDHIQQMIDELLDY 164
            +T  +    +  +G + +        T K+K+ + D  E  DD    QMI+ELL++
Sbjct: 125 SKTSPNWVK-LVELGDKVNARPGGDIETNKMKVRNEDVQE--DDQMAMQMIEELLNW 178

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-20
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSSSAA---RR 125
             S   S           S + LS  L AKL +        +  L+L   SS      +R
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 PQTDTIRTDV---SVTSGIAPVGVETDVTSTKKVKLESVDRGEPL---DDDHI-QQMIDE 164
             + T  T V    + + +    V+  +T+  K  +E  +  E     D+D +  +MI+E
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEE 184

[Close]

BLAST of Cp4.1LG11g03060 vs. NCBI nr
Match: XP_023546749.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 350 bits (897), Expect = 2.46e-121
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. NCBI nr
Match: XP_022962278.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita moschata])

HSP 1 Score: 348 bits (892), Expect = 1.43e-120
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTD SVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. NCBI nr
Match: KAG6598552.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 346 bits (888), Expect = 5.81e-120
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSA RRPQTDTIRTD SVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSATRRPQTDTIRTDFSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. NCBI nr
Match: KAG7029486.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 346 bits (888), Expect = 2.64e-119
Identity = 177/179 (98.88%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 44  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 103

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSA RRPQTDTIRTD SVTS
Sbjct: 104 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSATRRPQTDTIRTDFSVTS 163

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI
Sbjct: 164 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 222

[Close]

BLAST of Cp4.1LG11g03060 vs. NCBI nr
Match: XP_022996634.1 (ethylene-responsive transcription factor ERF003-like [Cucurbita maxima])

HSP 1 Score: 344 bits (883), Expect = 3.36e-119
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTD SVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVE DVTSTKKVKLESVDRGEPLDDDHIQQMI+ELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVEADVTSTKKVKLESVDRGEPLDDDHIQQMIEELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL
Match: A0A6J1HED1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462772 PE=4 SV=1)

HSP 1 Score: 348 bits (892), Expect = 6.90e-121
Identity = 178/179 (99.44%), Postives = 178/179 (99.44%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTD SVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL
Match: A0A6J1K9A3 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491817 PE=4 SV=1)

HSP 1 Score: 344 bits (883), Expect = 1.63e-119
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTD SVTS
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDFSVTS 120

Query: 121 GIAPVGVETDVTSTKKVKLESVDRGEPLDDDHIQQMIDELLDYGGIELRSAAGLQAQPI 179
           GIAPVGVE DVTSTKKVKLESVDRGEPLDDDHIQQMI+ELLDYGGIELRSAAGLQAQPI
Sbjct: 121 GIAPVGVEADVTSTKKVKLESVDRGEPLDDDHIQQMIEELLDYGGIELRSAAGLQAQPI 179

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL
Match: A0A5A7VHF4 (Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002150 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 1.13e-100
Identity = 157/175 (89.71%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTD IRTD SV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAP-VGVETDVTSTKKVKLESVDRGEPL-----DDDHIQQMIDELLDYGGIELR 169
           GIAP   VE D T+ KKVK+ESVD GEPL     DDDHIQQMI+ELLDYGGIELR
Sbjct: 121 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL
Match: A0A1S3BD40 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488338 PE=4 SV=1)

HSP 1 Score: 296 bits (759), Expect = 4.50e-100
Identity = 157/175 (89.71%), Postives = 160/175 (91.43%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 41  MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 100

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTD IRTD SV S
Sbjct: 101 TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDVIRTDFSVAS 160

Query: 121 GIAP-VGVETDVTSTKKVKLESVDRGEPL-----DDDHIQQMIDELLDYGGIELR 169
           GIAP   VE D T+ KKVK+ESVD GEPL     DDDHIQQMI+ELLDYGGIELR
Sbjct: 161 GIAPGERVEVDGTTAKKVKMESVDCGEPLMIEMLDDDHIQQMIEELLDYGGIELR 215

[Close]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL
Match: A0A0A0LSL8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=4 SV=1)

HSP 1 Score: 292 bits (748), Expect = 5.37e-99
Identity = 154/175 (88.00%), Postives = 159/175 (90.86%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPYDASLSRSSSSRLLSATLTAKLHRCY+AS+QLTKQSSSAARRPQTD IRTD SV S
Sbjct: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYVASMQLTKQSSSAARRPQTDVIRTDFSVAS 120

Query: 121 GIAPVG-VETDVTSTKKVKLESVDRGEPL-----DDDHIQQMIDELLDYGGIELR 169
           GIAPV  VE D  + KKVK+ESVD  EPL     DDDHIQQMI+ELLDYGGIELR
Sbjct: 121 GIAPVERVEVDTMTAKKVKMESVDCEEPLMIEMLDDDHIQQMIEELLDYGGIELR 175

[Close]

BLAST of Cp4.1LG11g03060 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 213.8 bits (543), Expect = 1.2e-55
Identity = 116/182 (63.74%), Postives = 137/182 (75.27%), Query Frame = 0


Query: 1   MPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60
           M RPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR
Sbjct: 1   MARPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRAR 60

Query: 61  TNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAARRPQTDTIRTDVSVTS 120
           TNFPY+ +   +SSS+LLSATLTAKLH+CYMASLQ+TKQ+ +   + QT T R+  + + 
Sbjct: 61  TNFPYNPNAIPTSSSKLLSATLTAKLHKCYMASLQMTKQTQT---QTQTQTARSQSADSD 120

Query: 121 GIA--PVGVETDVTSTKKVKLESVDRG-----EPLDDDHIQQMIDELLDYGGIELRSAAG 176
           G+      +   VT T ++K E  +        PL++DHI+QMI+ELL YG IEL S   
Sbjct: 121 GVTANESHLNRGVTETTEIKWEDGNANMQQNFRPLEEDHIEQMIEELLHYGSIELCSVLP 179

[Close]

BLAST of Cp4.1LG11g03060 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-26
Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQRHWGSWV+EIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPL 64

Query: 66  D-----------------ASLSRSSSSRLLSATLTAKLHRC 90
           +                 +++S S+SS  LS+ L+AKL +C
Sbjct: 65  NNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC 105

[Close]

BLAST of Cp4.1LG11g03060 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 7.5e-23
Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSSSAARRPQTDT 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDVSVTSGIAPVGVETDV-----TSTKKVKLESVDRGEPLDDDHIQQMIDELLDY 164
            +T  +    +  +G + +        T K+K+ + D  E  DD    QMI+ELL++
Sbjct: 125 SKTSPNWVK-LVELGDKVNARPGGDIETNKMKVRNEDVQE--DDQMAMQMIEELLNW 178

[Close]

BLAST of Cp4.1LG11g03060 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 100.5 bits (249), Expect = 1.4e-21
Identity = 76/184 (41.30%), Postives = 101/184 (54.89%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFETAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   RKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPV 64

Query: 66  DASLSRSS----------SSRLLSATLTAKLHRC------YMASLQLTKQSSSAA---RR 125
             S   S           S + LS  L AKL +        +  L+L   SS      +R
Sbjct: 65  VKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKR 124

Query: 126 PQTDTIRTDV---SVTSGIAPVGVETDVTSTKKVKLESVDRGEPL---DDDHI-QQMIDE 164
             + T  T V    + + +    V+  +T+  K  +E  +  E     D+D +  +MI+E
Sbjct: 125 AGSKTSPTWVMRLELGNVVNESAVDLGLTTMNKQNVEKEEEEEEAIISDEDQLAMEMIEE 184

[Close]

BLAST of Cp4.1LG11g03060 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-20
Identity = 74/177 (41.81%), Postives = 98/177 (55.37%), Query Frame = 0


Query: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65
           ++FRGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AA LM G  A+TNFP 
Sbjct: 5   KKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPV 64

Query: 66  DASLSRSS--------SSRLLSATLTAKLHR-C-----YMASLQLTKQSSSAARRPQTDT 125
             S   +S        S + LS  L AKL + C     Y+  L+L   SS      +   
Sbjct: 65  IKSNGSNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAG 124

Query: 126 IRTDVSVTSGIAPVGVETDV-----TSTKKVKLESVDRGEPLDDDHIQQMIDELLDY 164
            +T  +    +  +G + +        T K+K+ + D  E  DD    QMI+ELL++
Sbjct: 125 SKTSPNWVK-LVELGDKVNARPGGDIETNKMKVRNEDVQE--DDQMAMQMIEELLNW 175

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g03060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AW5	1.6e-54	63.74	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	4.9e-43	60.37	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]
Q9XI33	4.6e-25	59.41	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q3E958	1.1e-21	42.94	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q9LFN7	2.0e-20	41.30	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Cp4.1LG11g03060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546749.1	2.46e-121	100.00	ethylene-responsive transcription factor ERF003-like [Cucurbita pepo subsp. pepo...	[more]
XP_022962278.1	1.43e-120	99.44	ethylene-responsive transcription factor ERF003-like [Cucurbita moschata]	[more]
KAG6598552.1	5.81e-120	98.88	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7029486.1	2.64e-119	98.88	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022996634.1	3.36e-119	98.32	ethylene-responsive transcription factor ERF003-like [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g03060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HED1	6.90e-121	99.44	ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=36...	[more]
A0A6J1K9A3	1.63e-119	98.32	ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661...	[more]
A0A5A7VHF4	1.13e-100	89.71	Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var...	[more]
A0A1S3BD40	4.50e-100	89.71	ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0LSL8	5.37e-99	88.00	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=...	[more]

BLAST of Cp4.1LG11g03060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25190.1	1.2e-55	63.74	Integrase-type DNA-binding superfamily protein	[more]
AT1G15360.1	3.3e-26	59.41	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	7.5e-23	42.94	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	1.4e-21	41.30	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	3.5e-20	41.81	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 30..46 score: 70.91 coord: 8..19 score: 61.21
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 7..70 e-value: 2.0E-39 score: 147.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 7..56 e-value: 1.9E-11 score: 44.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 7..64 score: 20.718536
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 6..66 e-value: 7.57938E-34 score: 112.365
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 6..66 e-value: 4.5E-26 score: 92.8
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..172
None	No IPR available	PANTHER	PTHR31194:SF112	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003	coord: 1..172
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 7..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g03060.1	Cp4.1LG11g03060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity