Cp4.1LG11g02620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02620
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Rac-like GTP-binding protein
Location	Cp4.1LG11: 1438365 .. 1441094 (+)
RNA-Seq Expression	Cp4.1LG11g02620
Synteny	Cp4.1LG11g02620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTAAATAATAAAAAGAAAATTATATAATTAAGAGAGAGAGAGAGAGAGAGAGAGAAAGTGGGTTATTTGTGGTAGAGGGGAAGGGATTGGTGGCAGAAGGTGGGGAAGGCGGGCGAGCGCTTCAACCGCATTTCATTTCTTTCAAAATAACCCCATTTTCCTCCCATCTTTCTCTCTTTCTCTCTGCTCCTGCAATTTGGGATCTCTCCACTCTGCATTCCCCATTTTCCTCCCTTTTCAAGAATTCAGATCCTCCACTCTCTTTGATTCCTCTCTATCTTCAATATCCTCGATGGATTACTGTTGATTTTCTGATTTTCTCTTTCTTTTTGCTGGCCCTGATGAACGATCGATTCTGAGGGAGGAGAGAAAGGGAACGCCCACTTCGAACGAGGCATTGTAGTTTTCGTGTTTCGGATCTGGTGCTTCGAGATGAGTGCGTCCAGGTTTATAAAGTGCGTAACGGTTGGTGATGGTGCCGTGGGTAAAACCTGTATGTTGATTTCGTATACGAGCAACACTTTCCCCACGGTGAGTTTCTTTGTTTCTTTCTTTTCGTTTGTTATGTTTTCCTGCAATTTTGAGGTCTGGAGTGTGTTTTGATTTTCGATAACATCATTCTTATTCCTCGCTTGCTTGTTGTTAGAAAGTTTTATTGGATCTTGTGGAAGAACCACGGGAAGAAGGAAATAATAATGGTTTTCTACTTTGTAGGATATTTAAGAAGGAAATGTTCTTGATTATTCCTTTAGCCAAGCCTATTTCGTTGCCTTTTTTAGTTTTTCATGGCATGATTTCAATGGGAGCAAAAAGAAGGATTAAATTTCCGGATTTCTTTTTTTCGAAGACTGTTGTTTCGTGTATATTATTGTTTTAAAGCATTTAAGCGAGCTTGGATGATGATGATACATTATATTACTCGAATAATTCGTATCTGAAAATTGTTTGGTGTGTTTTAAGCCTTGATTGGAGCTTGTGGGGTTGAATTTCTGTCCGAAATGCGCGTTTTTGGATAACAATGCACCCGTTAACGCTTAATTTGCAGGACTACGTGCCTACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGGAACACGGTCAACCTAGGATTATGGGATACTGCTGGTAACCACATGATGAGAGTTCTAATTTCTCCGCCCAATAGCCTATTAGATCATTTTATTTAATGTTTAGAAGGGATTTGAAGTTACTCTTTTGAACAGGTCAAGAGGATTACAATAGATTAAGACCACTGAGCTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCCAAGAAGGTAGCAAGCTGTAGATGAAATCGATTATTATGCTAGCTAGCTCGATATTAACTGTTTATATGCTAAAATTATACCTTTGCCGATGACCCTTTTTACATTTTCACACAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGAACTAAACTTGGTAAGAATTATTTATTCGTTTTGAAGTCAGCTTTAGTAGAGTGATGCATCAGGTAGAGTAGTGGGTTAGTTCTGACTTTCAAGATAGTTAGTTGATCCTGATCCTCAACACCACCCTTTGTAAGTTAGCGAGAGCGTTTCCTTCACATTGCATGCCATTCCCTAGTTGAAGCAAGTTGAAAAGCCAGCCCGAGATGTGTGCATCCATCCATCCACAAGTTCTTCGTGTTGAAAGAATTTTTTTTCTCAAGAGTCGTATCCATCCATCCATCCAATATGAGAATAACTGAGTTAAAACATCACTACTTTCTCTAAGAGATCATAGGTTCAAATTCTCCACCTTCCTTATGTGCGATGTAAGTATCATCATTGTCATCACATAAGTGTATAATCTTGCAATTCACCTCACTGCGTTTCGTTCTTAGATCTTCGGGATGACAAGCAGTTCTTTGTAGACCACCCTGGTGCGGTGCCCATTACCACTGTTCAGGTAAATAAATACCTTCATAGCTACATTCATTAGCACATGTACGAAGGCGATTTTTGGTTGAATATGCTGTGTTATTTACTGACTGTAGGGAGAGGAGTTGACAAAAACTATCGGAGCCCCAGCATACATTGAGTGCAGTTCAAAAACCCAGCAGGCATGATGATGATAGATACCCATCTGTTTTTGGTTTGGGTATGAGTGCACACTTAATTGAAGGATTATGTTGGATGGTTTGTTGTTGCAGAATGTGAAAGCAGTGTTCGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCAAAGTCCAAGAAGAAGAAGAAGAAGTCGCAGAGTGTCTGTTCGGTGTTATGATCGCGGAAGGAATATGCTTTTGCTCGTGCCGAAGGAACGACAACTTCATATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCCATGTCATCCCAAGGATACGGCCCCAAGCTGACATTCCAAGATGCAAATAGAACAGTGATGGATGATGTTTGTTTCTTATTTTGCAATCTGTTTGTTAGCGATGACCACCAACATTGCTAACCCCCCAATTTCTCTGTTTGAATTTGTTCATGTATTAATGAGATACCTAAAAGAACTGCTCCCTGGGCATGAACATGAACATGGTTTAGTACTCCTAACATTATATTGTCTATTTCCATTCCTTTGAAAGCTCGTGTCAAACATAAATTGAATCTTCAACCTTTCCCAATAAATTT

mRNA sequence

AGTAAATAATAAAAAGAAAATTATATAATTAAGAGAGAGAGAGAGAGAGAGAGAGAAAGTGGGTTATTTGTGGTAGAGGGGAAGGGATTGGTGGCAGAAGGTGGGGAAGGCGGGCGAGCGCTTCAACCGCATTTCATTTCTTTCAAAATAACCCCATTTTCCTCCCATCTTTCTCTCTTTCTCTCTGCTCCTGCAATTTGGGATCTCTCCACTCTGCATTCCCCATTTTCCTCCCTTTTCAAGAATTCAGATCCTCCACTCTCTTTGATTCCTCTCTATCTTCAATATCCTCGATGGATTACTGTTGATTTTCTGATTTTCTCTTTCTTTTTGCTGGCCCTGATGAACGATCGATTCTGAGGGAGGAGAGAAAGGGAACGCCCACTTCGAACGAGGCATTGTAGTTTTCGTGTTTCGGATCTGGTGCTTCGAGATGAGTGCGTCCAGGTTTATAAAGTGCGTAACGGTTGGTGATGGTGCCGTGGGTAAAACCTGTATGTTGATTTCGTATACGAGCAACACTTTCCCCACGGACTACGTGCCTACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGGAACACGGTCAACCTAGGATTATGGGATACTGCTGGTCAAGAGGATTACAATAGATTAAGACCACTGAGCTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCCAAGAAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGAACTAAACTTGATCTTCGGGATGACAAGCAGTTCTTTGTAGACCACCCTGGTGCGGTGCCCATTACCACTGTTCAGAATGTGAAAGCAGTGTTCGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCAAAGTCCAAGAAGAAGAAGAAGAAGTCGCAGAGTGTCTGTTCGGTGTTATGATCGCGGAAGGAATATGCTTTTGCTCGTGCCGAAGGAACGACAACTTCATATGTACTCGCCTTTTTCTCAGCATATCTTTAATCCCATGTCATCCCAAGGATACGGCCCCAAGCTGACATTCCAAGATGCAAATAGAACAGTGATGGATGATGTTTGTTTCTTATTTTGCAATCTGTTTGTTAGCGATGACCACCAACATTGCTAACCCCCCAATTTCTCTGTTTGAATTTGTTCATGTATTAATGAGATACCTAAAAGAACTGCTCCCTGGGCATGAACATGAACATGGTTTAGTACTCCTAACATTATATTGTCTATTTCCATTCCTTTGAAAGCTCGTGTCAAACATAAATTGAATCTTCAACCTTTCCCAATAAATTT

Coding sequence (CDS)

ATGAGTGCGTCCAGGTTTATAAAGTGCGTAACGGTTGGTGATGGTGCCGTGGGTAAAACCTGTATGTTGATTTCGTATACGAGCAACACTTTCCCCACGGACTACGTGCCTACCGTTTTTGACAATTTCAGTGCCAATGTGGTGGTTGATGGGAACACGGTCAACCTAGGATTATGGGATACTGCTGGTCAAGAGGATTACAATAGATTAAGACCACTGAGCTATCGAGGTGCTGATGTTTTTATTCTTGCTTTCTCTCTCATAAGCAAGGCCAGCTATGAAAATGTTGCCAAGAAGTGGATTCCTGAATTGAGACATTATGCACCTGGTGTTCCAATAGTTCTTGTTGGAACTAAACTTGATCTTCGGGATGACAAGCAGTTCTTTGTAGACCACCCTGGTGCGGTGCCCATTACCACTGTTCAGAATGTGAAAGCAGTGTTCGATGCAGCCATTAAAGTGGTGCTCCAGCCGCCAAAGTCCAAGAAGAAGAAGAAGAAGTCGCAGAGTGTCTGTTCGGTGTTATGA

Protein sequence

MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKLDLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL

Homology

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BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 8.3e-88
Identity = 162/197 (82.23%), Postives = 171/197 (86.80%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTV----------------------QNVKAVFDAAIKVVLQP 176
           DLRDDKQFFVDHPGAVPI+T                       QN+KAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTAQGEELRKLIGAAAYIECSSKTQQNIKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot
Match: Q6ZHA3 (Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 PE=2 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.1e-87
Identity = 162/197 (82.23%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFFVDHPGAVPITT Q                      NVK VFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKQIGAPYYIECSSKTQLNVKGVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.2e-87
Identity = 162/197 (82.23%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTV----------------------QNVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITT                       QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKLIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot
Match: Q35638 (Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 4.1e-87
Identity = 161/197 (81.73%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTV----------------------QNVKAVFDAAIKVVLQP 176
           DLRDDKQFFVDHPGAVPITT                       QNVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQGEELRKLINAPAYIECSSKSQQNVKAVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot
Match: P92978 (Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE=1 SV=2)

HSP 1 Score: 321.6 bits (823), Expect = 5.4e-87
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITT Q                      NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. NCBI nr
Match: KAG7029448.1 (Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 350 bits (899), Expect = 9.00e-122
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL 175
           DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL 175

[Close]

BLAST of Cp4.1LG11g02620 vs. NCBI nr
Match: XP_022961886.1 (rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like GTP-binding protein RHO1 [Cucurbita maxima] >XP_023545925.1 rac-like GTP-binding protein RHO1 [Cucurbita pepo subsp. pepo] >KAG6598511.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 338 bits (866), Expect = 2.10e-116
Identity = 175/197 (88.83%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPITTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. NCBI nr
Match: XP_022951334.1 (rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP-binding protein 5 [Cucurbita maxima] >XP_023538238.1 rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo] >KAG6585531.1 Rac-like GTP-binding protein RAC1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 336 bits (861), Expect = 1.22e-115
Identity = 173/197 (87.82%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. NCBI nr
Match: XP_030523272.1 (rac-like GTP-binding protein ARAC3 isoform X2 [Rhodamnia argentea])

HSP 1 Score: 332 bits (851), Expect = 1.95e-114
Identity = 164/176 (93.18%), Postives = 170/176 (96.59%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVAKKWIPELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKK-KSQSVCSVL 175
           DLRDDKQFF+DHPGAVPITT QNVKAVFDAAIKVVLQPPK +KKKK KS   CS+L
Sbjct: 121 DLRDDKQFFIDHPGAVPITTSQNVKAVFDAAIKVVLQPPKQRKKKKRKSHKACSIL 176

[Close]

BLAST of Cp4.1LG11g02620 vs. NCBI nr
Match: EMS56278.1 (Rac-like GTP-binding protein 6 [Triticum urartu] >KAF7077545.1 hypothetical protein CFC21_082084 [Triticum aestivum] >VAI42608.1 unnamed protein product [Triticum turgidum subsp. durum] >KAF7085530.1 hypothetical protein CFC21_088943 [Triticum aestivum] >KAF7088238.1 hypothetical protein CFC21_091368 [Triticum aestivum])

HSP 1 Score: 332 bits (850), Expect = 2.67e-114
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL 175
           DLRDDKQFFVDHPGAVPITT QNVK VFDAAIKVVL PPK+KKKKK  +  CS+L
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQNVKGVFDAAIKVVLAPPKAKKKKKAQRGACSIL 175

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL
Match: A0A6J1K5N0 (rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.02e-116
Identity = 175/197 (88.83%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPITTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL
Match: A0A6J1HBK6 (rac-like GTP-binding protein RHO1 OS=Cucurbita moschata OX=3662 GN=LOC111462525 PE=3 SV=1)

HSP 1 Score: 338 bits (866), Expect = 1.02e-116
Identity = 175/197 (88.83%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPITTVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPITTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL
Match: A0A6J1KP50 (rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 5.88e-116
Identity = 173/197 (87.82%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL
Match: A0A6J1GID5 (rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=3 SV=1)

HSP 1 Score: 336 bits (861), Expect = 5.88e-116
Identity = 173/197 (87.82%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 175
           DLRDDKQFFVDHPGAVPI+TVQ                      NVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFVDHPGAVPISTVQGEELTKTIGAPAYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL
Match: A0A341X962 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 332 bits (850), Expect = 1.29e-114
Identity = 161/175 (92.00%), Postives = 168/175 (96.00%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQNVKAVFDAAIKVVLQPPKSKKKKKKSQSVCSVL 175
           DLRDDKQFFVDHPGAVPITT QNVK VFDAAIKVVL PPK+KKKKK  +  CS+L
Sbjct: 121 DLRDDKQFFVDHPGAVPITTAQNVKGVFDAAIKVVLAPPKAKKKKKAQRGACSIL 175

[Close]

BLAST of Cp4.1LG11g02620 vs. TAIR 10
Match: AT3G51300.1 (RHO-related protein from plants 1 )

HSP 1 Score: 321.6 bits (823), Expect = 3.8e-88
Identity = 160/197 (81.22%), Postives = 170/197 (86.29%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRF+KCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1   MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITT Q                      NVKAVFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. TAIR 10
Match: AT4G35950.1 (RAC-like 6 )

HSP 1 Score: 320.9 bits (821), Expect = 6.6e-88
Identity = 161/197 (81.73%), Postives = 169/197 (85.79%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITTVQ                      NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. TAIR 10
Match: AT1G75840.1 (RAC-like GTP binding protein 5 )

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-87
Identity = 162/188 (86.17%), Postives = 164/188 (87.23%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPI+LVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPIT----------------------TVQNVKAVFDAAIKVVLQP 167
           DLRDDKQFF+DHPGAVPIT                      T QNVKAVFDAAIKVVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 )

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-87
Identity = 160/197 (81.22%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITT Q                      NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

[Close]

BLAST of Cp4.1LG11g02620 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 )

HSP 1 Score: 319.3 bits (817), Expect = 1.9e-87
Identity = 160/197 (81.22%), Postives = 168/197 (85.28%), Query Frame = 0


Query: 1   MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
           MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVV+G TVNLGLWD
Sbjct: 1   MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60

Query: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIVLVGTKL 120
           TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENV+KKWIPEL+HYAPGVPIVLVGTKL
Sbjct: 61  TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120

Query: 121 DLRDDKQFFVDHPGAVPITTVQ----------------------NVKAVFDAAIKVVLQP 176
           DLRDDKQFF+DHPGAVPITT Q                      NVK VFDAAI+VVLQP
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6EP31	8.3e-88	82.23	Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 ...	[more]
Q6ZHA3	1.1e-87	82.23	Rac-like GTP-binding protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC6 ...	[more]
Q39435	3.2e-87	82.23	Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1	[more]
Q35638	4.1e-87	81.73	Rac-like GTP-binding protein RHO1 OS=Pisum sativum OX=3888 GN=RHO1 PE=2 SV=1	[more]
P92978	5.4e-87	81.22	Rac-like GTP-binding protein ARAC11 OS=Arabidopsis thaliana OX=3702 GN=ARAC11 PE...	[more]

BLAST of Cp4.1LG11g02620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7029448.1	9.00e-122	100.00	Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022961886.1	2.10e-116	88.83	rac-like GTP-binding protein RHO1 [Cucurbita moschata] >XP_022997632.1 rac-like ...	[more]
XP_022951334.1	1.22e-115	87.82	rac-like GTP-binding protein 5 [Cucurbita moschata] >XP_023002505.1 rac-like GTP...	[more]
XP_030523272.1	1.95e-114	93.18	rac-like GTP-binding protein ARAC3 isoform X2 [Rhodamnia argentea]	[more]
EMS56278.1	2.67e-114	92.00	Rac-like GTP-binding protein 6 [Triticum urartu] >KAF7077545.1 hypothetical prot...	[more]

BLAST of Cp4.1LG11g02620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5N0	1.02e-116	88.83	rac-like GTP-binding protein RHO1 OS=Cucurbita maxima OX=3661 GN=LOC111492507 PE...	[more]
A0A6J1HBK6	1.02e-116	88.83	rac-like GTP-binding protein RHO1 OS=Cucurbita moschata OX=3662 GN=LOC111462525 ...	[more]
A0A6J1KP50	5.88e-116	87.82	rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111496326 PE=3 ...	[more]
A0A6J1GID5	5.88e-116	87.82	rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111454197 PE=...	[more]
A0A341X962	1.29e-114	92.00	Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1	[more]

BLAST of Cp4.1LG11g02620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51300.1	3.8e-88	81.22	RHO-related protein from plants 1	[more]
AT4G35950.1	6.6e-88	81.73	RAC-like 6	[more]
AT1G75840.1	1.5e-87	86.17	RAC-like GTP binding protein 5	[more]
AT2G17800.1	1.9e-87	81.22	Arabidopsis RAC-like 1	[more]
AT2G17800.2	1.9e-87	81.22	Arabidopsis RAC-like 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 7..28 score: 44.74 coord: 30..46 score: 32.14 coord: 109..122 score: 52.36 coord: 47..69 score: 49.3
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 4..158 e-value: 1.7E-11 score: 45.6
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 7..158 e-value: 1.3E-17 score: 74.5
None	No IPR available	PANTHER	PTHR24072:SF336	RAC-LIKE GTP-BINDING PROTEIN 5	coord: 140..175 coord: 1..142
None	No IPR available	PROSITE	PS51419	RAB	coord: 2..175 score: 16.503736
None	No IPR available	PROSITE	PS51420	RHO	coord: 1..175 score: 20.430323
None	No IPR available	CDD	cd04133	Rop_like	coord: 6..156 e-value: 9.19506E-116 score: 323.721
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 9..158 e-value: 2.7E-89 score: 312.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..127 e-value: 6.4E-43 score: 146.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 2..175 score: 12.544359
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 7..126 e-value: 4.0E-33 score: 112.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 5..170 e-value: 1.4E-59 score: 202.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..155
IPR003578	Small GTPase Rho	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 140..175 coord: 1..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02620.1	Cp4.1LG11g02620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007015	actin filament organization
biological_process	GO:0030865	cortical cytoskeleton organization
biological_process	GO:0007163	establishment or maintenance of cell polarity
biological_process	GO:0032956	regulation of actin cytoskeleton organization
biological_process	GO:0008360	regulation of cell shape
biological_process	GO:0007264	small GTPase mediated signal transduction
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0042995	cell projection
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0005856	cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0019901	protein kinase binding