Cp4.1LG11g02420 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02420
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	zinc finger CCCH domain-containing protein 6-like
Location	Cp4.1LG11: 1328053 .. 1332237 (+)
RNA-Seq Expression	Cp4.1LG11g02420
Synteny	Cp4.1LG11g02420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGCATTGCATCTCAGGTAGAGTAAATTTTGGTAGAAGCCAAAATAAACACAAATGTACTTGAAATAAGGAAACGAAGCCAAAAGGAAATGATGAGGCGGTAGCCGGGAAGCCTGAACCAGAGGATCTAGGGTTTTCTTCGATCTCTCTGTCTTGTTTATGTTACATGCAAATCTAGATCAGCCTTCTGCAATTCCACCTTGCACAATTTGTTGACACGTTTCGATTTAGGAATGATAACAGAATCTTCTTTAAAAGTTTGAAAAACGGAGCCCGGATTCGACGAGATAGCAGTCGGGCTTTCATTCTCATCGGGATCAAATTCCGACTCTTAACCGTGAAACATTTGAAGAGATAGCAGTTTGAGTACCTTTAAATATGCGAGGATTGCACAAAGGAAAAAGGGTTTCATGGGCGTCAGATCTTAATCTCCGTCAGGTAATAACTACGTTTCCTCTGATTTAATTTGACGTATTTAGGGCTTAATTTTATTAAACGGAGAACAATTTTGGGAACTAGTCATCTGCCGCCTCGATTTTGGGATTTTTTCCCCCTCCTCATCGTTCTAATTAGTGTAGTTTTAGTCTAAATTTCATTTCTACCTAGAAACATTTGTGTTTTAAACCTTTGCTTCATTATCATGCTTTACTTACTGCTTATCTCCGTGAAGAACACAATTTGAGTCTCATGGCTCAATTCTGGTTTAGCCACTAATTTCAAGTATCCTGGGAATAGAGAAGTAAATGGAAAAATTTCTGTATCACAATTTTTTGTGTCTAAATTCAAATCAATCGCATAATGAAAATGAATGGATTGATAACATAGACCCAATTGTTTACAAGTTTTATTTCACGAAGGCATATGCCCACAAGATCACTTCGAGGCAGGGTATAGCATTTAAGTTCACCAGAGGTCTTGCCTCCGTTTGAACAAACCGTCTTTGCACCTCATACAATAGCTTGAAGATTCATATCAATCTGCTTGAAGAAATAAATCTCTACATTTTGTAACTGTGATGGTGATGTTGAGAATACCCATTAGAATCTTTAATTAAGAAAGTAACAATTTATGGAGTTAAGAATCTTTTTAGGTGAAATACACTTTTGACTTTTATTTGGTCCTAATCCTAAGTTTAAAATAGTGACATTTTAGTTCCTAACTTCTAGGATAGAGTTTTAAAAGGTTCTCGACTTTTAGTTGATTAACGGAAAAAACGATTTTAACTAAATTATTCCAATGTTTTTTTAGTTTAGGTGACATATCTATCTGTTCCTTCTCCCTCTGCCTACCATTCTTAGATACTAAGGGGATATTAGTTATTAGCCAGAGAATTTTCCAGTAGGATGTGGTTCTACCTGGACGAAGTGGGAGAGGAGTAAGGAAGGCAATGGTTTGAGTTCTTGGGGCTTGAGTTTACTTGGAGGAGGGTTCCAAGTTCCTCCAACTGTTTAGGTGTCTATTTGTATTTTCTAGTTCATTATCACTTTATTTCTCTAATATCTCAGTTCTTGTATTTATATCTATAATCAAATGTTGTGATACTGTTAAATTCCCAAAATTCTATAAGAACGATAAAATATTACGTTCATTTAGTACTTCCTTTTGCTTCACACTGAAATATTTTAAGTTTGTTTATATATAAAAAATAATGTAACCCTAACATATCATAGGATTATAGTGCAATGTTGTTTTAAGTTATATGTATATATATTTAGCTTAGAAATACACACATTATGATAACATCGTGTAGATTTTATATAAATTGTTGATATTAGAAACTAAAAGTTTTGTGACTATTATTTTTTTTTTATACGCTTACAAGTAGTAAGCGAGTATGTTCATCCAAACATATGTTTTATAACATATTTTTTGAAGAGTAGCTTGTACCTCTATGATTCGAACCTCATATTTCTAGGAGTTTTTGTAATTATCATAGTGCAATGTTGTTTTAAGTTATATGTATGTATATTTAGCTTAGAAATACACACATTATGATAACATCGTGTAGATTTTATATAAATTGTTGATATTAGAAACTAAAAGTTTTATGATTATTTATATTTTTTTATATGCTTACAAGTAGTAAGCGAATATGTTCGTCCAAACATATGTTTTATAACATATTTTTTGAAGAGTAGCTTGTACCTCTATGACTCGAACCTCACGCTTCTAGGAGTTTTTGTAATTATCAATCTGTCCTTGTAATTTCGGATGAATTTTTTTTTTCTCTCTCATTTTTGGTAGTAGGTAGTTTAGGTTCTAATTTGGCTCCTTTTGTTTGAATGTCTTTTATATGCTAACAGGAAACAAATGCATCATTCGTTTGCAGGTTAGGCTGTTCTTGTCTGAGGATTGTCCTTCCCAAGTGGGATTGGGTGCCCAAGATCACCTTCAAGCAAAGGCATCGTGGCTCTTGCATTCTACTGGGTCAGGTTCTGATGACACTTTGCCTCCTGGATTTGAAGTAGCCCATTCAGAGAATCAGTCGCAGATTAAGCTCTCACAGATTCCTGTTAATCAATGGAGATGTCCGCCTAAGGTAAGTAGTGATTTCATTTTCAATTTATGTTGAACAACTAGAACTATAGCTCTGCAAGTTTAACATGAAATTCATGCTTTTTGTCCCATGGCAGTTTTTTTTCTTCTTTTCCTTTTAATGTTTATTCCCGTAGTTTGTGCTGAATTTGACGTGGCAAGTGGTTGTTGGTGAAGAAAGCCAAGAGGTAGTTGTTGAAAATCAGAGAGAGATGAGAGTACTTGAAGCGGTTTATCCTCGGCCATCTGCAATTCCTCCTAAGTTGATTACTTCCTTTGCACCTTATAGTTCTGTTTTGGCATTGGTTTGTTTGTTATTCTTTATACTGAAAATCCGTTTGGTTTGCATCCCTACAGCCCGTCCGTAGTAGCTGATTCAGAACGTGCCAATGTAGATGACAGTCGAACACCTCTGATTCCCATTACTCCTGTTGAAGATGAAGATGCAACAACCGAAACCTCGTCTGATTACGCAAGCCCCGCCTCTGTCCTTAATACGAGTGCACAGCCCTCCCCATTTACTCCTGCTGGTAGATCCACATCTCAACATGTTTTACTAAATGCGATGTCTTCTACTTCTAGTGTGAGTTCTATGGCTGGAATGGATCTTGGCAACAAACATGATGTTGTAGCTGCTGCATCTGCGGCACTCGGTGCACTTGTGAAGAGCAATGAGATAGGTAACTCGATCGACCGTGAATTACTTGTTAATATTCTCAACAATCCAAAAATGATCGAACAGCTGGTTGTGGATTCTGGTGTTGTCACAAGCACTCAAAAGCCAATATCATCTCCTGACCCACAGCTTGTACATATGCCTATGTCCGAAACCAATGCCACCATTACGCCTCCTTTTTTCTCTCAACCAAATGGAGGGAGTGTAGCACCTGTCCCCAACGCACACCCTTCCTCAAGGAGTGTACCAGTTTCTTCTTCCCTGCCCTCCAATGGAGCCCCAATGAAGGACTTGAATTACTATAAAAGTTTGATTCAGCAACATGGAGGGGAGAGACAGGACGATCCCCCTCGGCAGCAGCAATTCCCGAACCGTCACAACCAACTCTTGGGTACAAACCAAGAGTTCTTACAGAACCAGCCATCAAGAGAAGCAAAGTTCAAGATAATGAAACCCTGCATATATTTTAACAGCCCGAGAGGATGTCGACATGGAGCTAATTGTGCGTATCAGCACGACCCCGTGTTCCAGCAGAGAAGTAGTAGCGTGCCAGAAATGCCTACTAGCGCCAAAAGAACAAAGGTCGATAGAGAAATCAGCAGTTAAAAAGTAGAGTATCCTTACGAATCTCGGTCAATGCGTCCTTTCCTAGTTGTGAATGCTATATGCCCAAGATTTCATCTCTTTAGTTGGAAAGTTACTTAATTGTTATGTTTCTATCTGTGTCTGCACGAGAGAACCATGGTGATGAGGCCAGGGATTCTCTTTGCCACAATTGATTTAGTAATTTTAGCATGAAAACAGACTGTCCGTTTGATGATGAATTTGTTGAGATGATAGGCTTTTTGAAGTTTATAGTTAGAAGGATTGTTAGATGATGTTACATTGCTCGAAAGGGCAACTATCATATACTCAATATCACTCTCGTTTTGTTGTAATCTTGATCTCTCGTTTTGTTGTAATCTTGATTTAT

mRNA sequence

CAATGCATTGCATCTCAGGTAGAGTAAATTTTGGTAGAAGCCAAAATAAACACAAATGTACTTGAAATAAGGAAACGAAGCCAAAAGGAAATGATGAGGCGGTAGCCGGGAAGCCTGAACCAGAGGATCTAGGGTTTTCTTCGATCTCTCTGTCTTGTTTATGTTACATGCAAATCTAGATCAGCCTTCTGCAATTCCACCTTGCACAATTTGTTGACACGTTTCGATTTAGGAATGATAACAGAATCTTCTTTAAAAGTTTGAAAAACGGAGCCCGGATTCGACGAGATAGCAGTCGGGCTTTCATTCTCATCGGGATCAAATTCCGACTCTTAACCGTGAAACATTTGAAGAGATAGCAGTTTGAGTACCTTTAAATATGCGAGGATTGCACAAAGGAAAAAGGGTTTCATGGGCGTCAGATCTTAATCTCCGTCAGGTTAGGCTGTTCTTGTCTGAGGATTGTCCTTCCCAAGTGGGATTGGGTGCCCAAGATCACCTTCAAGCAAAGGCATCGTGGCTCTTGCATTCTACTGGGTCAGGTTCTGATGACACTTTGCCTCCTGGATTTGAAGTAGCCCATTCAGAGAATCAGTCGCAGATTAAGCTCTCACAGATTCCTGTTAATCAATGGAGATGTCCGCCTAAGTTTGTGCTGAATTTGACGTGGCAAGTGGTTGTTGGTGAAGAAAGCCAAGAGGTAGTTGTTGAAAATCAGAGAGAGATGAGAGTACTTGAAGCGGTTTATCCTCGGCCATCTGCAATTCCTCCTAACCCGTCCGTAGTAGCTGATTCAGAACGTGCCAATGTAGATGACAGTCGAACACCTCTGATTCCCATTACTCCTGTTGAAGATGAAGATGCAACAACCGAAACCTCGTCTGATTACGCAAGCCCCGCCTCTGTCCTTAATACGAGTGCACAGCCCTCCCCATTTACTCCTGCTGGTAGATCCACATCTCAACATGTTTTACTAAATGCGATGTCTTCTACTTCTAGTGTGAGTTCTATGGCTGGAATGGATCTTGGCAACAAACATGATGTTGTAGCTGCTGCATCTGCGGCACTCGGTGCACTTGTGAAGAGCAATGAGATAGGTAACTCGATCGACCGTGAATTACTTGTTAATATTCTCAACAATCCAAAAATGATCGAACAGCTGGTTGTGGATTCTGGTGTTGTCACAAGCACTCAAAAGCCAATATCATCTCCTGACCCACAGCTTGTACATATGCCTATGTCCGAAACCAATGCCACCATTACGCCTCCTTTTTTCTCTCAACCAAATGGAGGGAGTGTAGCACCTGTCCCCAACGCACACCCTTCCTCAAGGAGTGTACCAGTTTCTTCTTCCCTGCCCTCCAATGGAGCCCCAATGAAGGACTTGAATTACTATAAAAGTTTGATTCAGCAACATGGAGGGGAGAGACAGGACGATCCCCCTCGGCAGCAGCAATTCCCGAACCGTCACAACCAACTCTTGGGTACAAACCAAGAGTTCTTACAGAACCAGCCATCAAGAGAAGCAAAGTTCAAGATAATGAAACCCTGCATATATTTTAACAGCCCGAGAGGATGTCGACATGGAGCTAATTGTGCGTATCAGCACGACCCCGTGTTCCAGCAGAGAAGTAGTAGCGTGCCAGAAATGCCTACTAGCGCCAAAAGAACAAAGGTCGATAGAGAAATCAGCAGTTAAAAAGTAGAGTATCCTTACGAATCTCGGTCAATGCGTCCTTTCCTAGTTGTGAATGCTATATGCCCAAGATTTCATCTCTTTAGTTGGAAAGTTACTTAATTGTTATGTTTCTATCTGTGTCTGCACGAGAGAACCATGGTGATGAGGCCAGGGATTCTCTTTGCCACAATTGATTTAGTAATTTTAGCATGAAAACAGACTGTCCGTTTGATGATGAATTTGTTGAGATGATAGGCTTTTTGAAGTTTATAGTTAGAAGGATTGTTAGATGATGTTACATTGCTCGAAAGGGCAACTATCATATACTCAATATCACTCTCGTTTTGTTGTAATCTTGATCTCTCGTTTTGTTGTAATCTTGATTTAT

Coding sequence (CDS)

ATGCGAGGATTGCACAAAGGAAAAAGGGTTTCATGGGCGTCAGATCTTAATCTCCGTCAGGTTAGGCTGTTCTTGTCTGAGGATTGTCCTTCCCAAGTGGGATTGGGTGCCCAAGATCACCTTCAAGCAAAGGCATCGTGGCTCTTGCATTCTACTGGGTCAGGTTCTGATGACACTTTGCCTCCTGGATTTGAAGTAGCCCATTCAGAGAATCAGTCGCAGATTAAGCTCTCACAGATTCCTGTTAATCAATGGAGATGTCCGCCTAAGTTTGTGCTGAATTTGACGTGGCAAGTGGTTGTTGGTGAAGAAAGCCAAGAGGTAGTTGTTGAAAATCAGAGAGAGATGAGAGTACTTGAAGCGGTTTATCCTCGGCCATCTGCAATTCCTCCTAACCCGTCCGTAGTAGCTGATTCAGAACGTGCCAATGTAGATGACAGTCGAACACCTCTGATTCCCATTACTCCTGTTGAAGATGAAGATGCAACAACCGAAACCTCGTCTGATTACGCAAGCCCCGCCTCTGTCCTTAATACGAGTGCACAGCCCTCCCCATTTACTCCTGCTGGTAGATCCACATCTCAACATGTTTTACTAAATGCGATGTCTTCTACTTCTAGTGTGAGTTCTATGGCTGGAATGGATCTTGGCAACAAACATGATGTTGTAGCTGCTGCATCTGCGGCACTCGGTGCACTTGTGAAGAGCAATGAGATAGGTAACTCGATCGACCGTGAATTACTTGTTAATATTCTCAACAATCCAAAAATGATCGAACAGCTGGTTGTGGATTCTGGTGTTGTCACAAGCACTCAAAAGCCAATATCATCTCCTGACCCACAGCTTGTACATATGCCTATGTCCGAAACCAATGCCACCATTACGCCTCCTTTTTTCTCTCAACCAAATGGAGGGAGTGTAGCACCTGTCCCCAACGCACACCCTTCCTCAAGGAGTGTACCAGTTTCTTCTTCCCTGCCCTCCAATGGAGCCCCAATGAAGGACTTGAATTACTATAAAAGTTTGATTCAGCAACATGGAGGGGAGAGACAGGACGATCCCCCTCGGCAGCAGCAATTCCCGAACCGTCACAACCAACTCTTGGGTACAAACCAAGAGTTCTTACAGAACCAGCCATCAAGAGAAGCAAAGTTCAAGATAATGAAACCCTGCATATATTTTAACAGCCCGAGAGGATGTCGACATGGAGCTAATTGTGCGTATCAGCACGACCCCGTGTTCCAGCAGAGAAGTAGTAGCGTGCCAGAAATGCCTACTAGCGCCAAAAGAACAAAGGTCGATAGAGAAATCAGCAGTTAA

Protein sequence

MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTLPPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLEAVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFSQPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSSVPEMPTSAKRTKVDREISS

Homology

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy Swiss-Prot
Match: Q56XU4 (Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=At1g19860 PE=1 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 7.5e-77
Identity = 196/449 (43.65%), Postives = 264/449 (58.80%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MR LH  KRVSW  D  L QVRLF+SED PSQVG  +QDHLQAK+    H     SDD L
Sbjct: 1   MRALH--KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP----SDDNL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGF    S N+SQIKLS IP+ +W+C  + +L+  W+VV G+ES+EV  +N+RE+RVLE
Sbjct: 61  PPGFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           A YP  S+IPPNPSV AD E ++ DD +T +IPI PVED+D   +++SD+ + + V +  
Sbjct: 121 AFYPGASSIPPNPSVPADVEDSHHDDQQTIVIPILPVEDDDIAMDSASDFPTQSGV-DVG 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
            +PS             + +  +STSS +  AG D+           AAL A+  S E G
Sbjct: 181 TEPS-------------ITDENTSTSS-TLPAGPDI----------MAALSAISNSKEQG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATI-TPPFF 300
           + ID++LL+ IL+NPK++E LV + G   S    +SS    L      E N  + T P  
Sbjct: 241 SMIDQDLLIKILSNPKLVENLVANRGSAGS----VSSNTSSLYSSSTHEANGVVTTAPIS 300

Query: 301 SQPNGGSVAPVPNAHPSSRSVPVSSSLPSNGA-PMKDLNYYKSLIQQHGGERQDDPPRQQ 360
           S     +  P+ +  P + +       P+ GA P +D +YYK+LIQQHGG+RQ+ PP  Q
Sbjct: 301 SNGQFYAQPPITHIPPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGGDRQETPP-VQ 360

Query: 361 QFPNRHNQLL--GTNQEFL----QNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDP 420
               R+N     G N E +     NQ  R++K KIMK C+YFNS RGCRHGANC YQHD 
Sbjct: 361 HLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDA 413

Query: 421 V-FQQRSSSVPEMPTS----AKRTKVDRE 437
             +Q R+ +   + TS    AKR + DR+
Sbjct: 421 TPYQPRNLNNGNINTSDMQNAKRMRFDRD 413

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy Swiss-Prot
Match: Q7XM16 (Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0663200 PE=2 SV=3)

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-67
Identity = 173/478 (36.19%), Postives = 251/478 (52.51%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           M G  + +RVSWAS  NL +VRLFLSED PSQ GL  QD+LQAK SWLLH+ G  SDD+L
Sbjct: 1   MMGSRRSRRVSWASGGNLCKVRLFLSEDSPSQAGLRPQDNLQAKGSWLLHAAGPSSDDSL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFE     N  +I +SQIP+ +W+CPP  VL   W +V GEES+E+ ++N+R    LE
Sbjct: 61  PPGFESLPPSNDLKIDMSQIPLIRWKCPPHIVLEQDWHIVAGEESREIEIQNERINGALE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSS------DYASPA 180
           A+YPRPS IPPNP +  D + A+ DDS+T L+P+ P+ED+DA+ +          + +  
Sbjct: 121 AIYPRPSNIPPNPFLSLDVKDAHYDDSKTLLVPLIPLEDDDASDQLEGPTLDLPSHYNIT 180

Query: 181 SVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALV 240
            V NT        P G + S    +   ++ S+  +     + +  +         G++ 
Sbjct: 181 GVSNTPVSAEQQPPCGGAISSGFTIEPQAAVSATVTAIMQTIQSNQN---------GSMA 240

Query: 241 KSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATI 300
             N  G++ID+ELL  IL++P  +++L+ + G V   Q   SS    LV +P  +  A+ 
Sbjct: 241 DQN--GSTIDQELLFKILSDPSQLQRLMKECGPVRHEQSASSSVVAPLVSIPPPQITASS 300

Query: 301 --------------------TPPFFSQPNGGSVAPVPNAHP--SSRSVPVSSSLPSN--- 360
                                PP  ++P   ++  V   HP  SS ++   S+LPS+   
Sbjct: 301 PAPFSDHVGTFHGMNPTLPPPPPMMNRP-PSTIPSVAMNHPPSSSPAMNFGSALPSSSPS 360

Query: 361 ----GAPMKDLNYYKSLIQQHGGERQDDPPRQ---------QQFPNRHNQLLGTNQEFLQ 420
                 P + + YYK+LI QHGGER + P  Q         Q  P ++  +   N     
Sbjct: 361 VNFGSVPGRGVGYYKTLIHQHGGERLEQPFEQHGMQFGMYRQPGPPQNGGIDAMNG--AA 420

Query: 421 NQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSSVPEMPTSAKRTKVD 435
              SR+ K + MKPC YFNSP+GCR+GA+C + HD     R     +    +KR K+D
Sbjct: 421 AMVSRDGKVRPMKPCAYFNSPKGCRNGASCTFLHDASAPTRKDH--QKQKGSKRIKLD 462

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy Swiss-Prot
Match: Q94C33 (Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN=At3g51180 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 4.0e-30
Identity = 157/554 (28.34%), Postives = 224/554 (40.43%), Query Frame = 0


Query: 6   KGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTLPPGFE 65
           K  RVSW     L QV++F +ED P+ V    Q H         + +       LPPGFE
Sbjct: 8   KKPRVSWPPGPKLCQVKVFRTEDSPANVASQPQRH--------SYPSRKPRGPDLPPGFE 67

Query: 66  VAHSENQSQIKLSQIPVNQW-RCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLEAVYP 125
             H   +  +  S IP  +W R PPKF +N TW V  G  S E   EN R  +VLEA+YP
Sbjct: 68  GNHYAVKPNV--SNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKVLEAIYP 127

Query: 126 RPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTSAQPS 185
             SAIP  PSV    E    DDS+TP I +TP+EDE   +E+SS+ +S + V        
Sbjct: 128 HRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIEDE---SESSSEESSNSKV-------- 187

Query: 186 PFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSID 245
               +G + ++   L      S+   ++G+  G   D+  AASAAL AL+K+ E G+ +D
Sbjct: 188 ---ESGVTANKQGQLETKPLCSTQEQVSGL-TGLAPDLSLAASAALTALMKTKEQGSLVD 247

Query: 246 RELLVNILNNPKMIEQLVVDSG----------VVT---STQKPISSP-----------DP 305
            ELL+  L++PK+I+ L+ D+           +VT   S  +P+  P            P
Sbjct: 248 TELLIKFLSDPKLIKNLITDTSGKSSETKNQPIVTNINSATRPVPQPVSAVTASPMARKP 307

Query: 306 QLVHMPMSETNAT----------ITPPFFSQPNGGSVAPVP--NAHPSSRSVPV------ 365
           Q V +P   + A           ++PP   +P  GS++P       PSS  +PV      
Sbjct: 308 QPVIIPQEHSVAVSRSFTNPERRVSPP---KPVNGSISPPKPITGKPSSIPMPVHFHVGI 367

Query: 366 -----------SSSLPSN------------------------------------------ 425
                      SSSLP N                                          
Sbjct: 368 AKEQPQPARFPSSSLPMNLNFHRPPNVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIG 427

Query: 426 ----------------------------GAPMKDLNYYKSLIQQHGGERQDDPPRQQQFP 436
                                         PMK L+Y+K+LI++HG +  +         
Sbjct: 428 LGRGPQTGFNSYPMNFSRADAIGSAKPVVQPMKGLDYFKNLIREHGTDNHE--------T 487

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy Swiss-Prot
Match: Q9FH61 (Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana OX=3702 GN=At5g66270 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.8e-30
Identity = 149/526 (28.33%), Postives = 212/526 (40.30%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           M+   KG RVSWASD  L QV+LFLS+DCP +V                          L
Sbjct: 2   MKKTKKG-RVSWASDSMLCQVKLFLSDDCPVKVA-----------------------SNL 61

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFE   ++  ++  +S IP  +W+ PP FVL+    V  G +S E   EN R  +VLE
Sbjct: 62  PPGFEA--TDYATKRIISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLE 121

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDE-DATTETSSDYASPASVLNT 180
           A YP  S IP  PS+    E  + DD +TP IP+T VEDE DA  E+S  + +PA+V   
Sbjct: 122 AFYPHRSVIPSRPSLTLAVEEEHYDDGKTPNIPLTHVEDERDAAAESSHSFEAPAAV--- 181

Query: 181 SAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEI 240
                                         S  G +L         ASAAL AL K  E 
Sbjct: 182 ------------------------------SGLGPELS------LLASAALSALTK--EQ 241

Query: 241 GNSIDRELLVNILNNPKMIEQLV------------------------VDSGVVTSTQKPI 300
           G+ +D +LLV +L++PK++E L+                            V ++T    
Sbjct: 242 GSQVDPDLLVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRN 301

Query: 301 SSPDPQLV---HMPMSETNATITPPF--FSQPNGGSVA---------PVPNAHPSSRSVP 360
             P P  V   ++P+S  ++   PP    +QP   +++         PV + +P S  + 
Sbjct: 302 PPPMPGNVAPHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGIK 361

Query: 361 VSSSL------PSNG--------------------------------------------- 420
           V  S       PS G                                             
Sbjct: 362 VEDSYTAAPLKPSTGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETDPQIRNGNTNRDD 421

Query: 421 ----APMKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFK 433
                P+KDL+Y+K+LI++HG  +    P   +  N   ++             +  K +
Sbjct: 422 QVSAKPVKDLDYFKNLIREHGAVK----PATTETNNYKGRV----------DHKKIVKVR 446

[Close]

BLAST of Cp4.1LG11g02420 vs. NCBI nr
Match: XP_023546238.1 (zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo] >XP_023546239.1 zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo] >XP_023546240.1 zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 857 bits (2215), Expect = 1.68e-313
Identity = 439/439 (100.00%), Postives = 439/439 (100.00%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           VPEMPTSAKRTKVDREISS
Sbjct: 421 VPEMPTSAKRTKVDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. NCBI nr
Match: XP_022962124.1 (zinc finger CCCH domain-containing protein 6-like [Cucurbita moschata] >KAG7029427.1 Zinc finger CCCH domain-containing protein 6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 852 bits (2200), Expect = 3.24e-311
Identity = 436/439 (99.32%), Postives = 437/439 (99.54%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSR VPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRGVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQ LGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQHLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           VPEMPTSAKRTKVDREISS
Sbjct: 421 VPEMPTSAKRTKVDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. NCBI nr
Match: KAG6598491.1 (Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 848 bits (2190), Expect = 1.08e-309
Identity = 434/439 (98.86%), Postives = 436/439 (99.32%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATT+TSSDYASPASVLN S
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTKTSSDYASPASVLNMS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSR VPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRGVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQ LGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQHLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           VPEMPTSAKRTKVDREISS
Sbjct: 421 VPEMPTSAKRTKVDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. NCBI nr
Match: XP_022997032.1 (zinc finger CCCH domain-containing protein 6-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 843 bits (2177), Expect = 1.04e-307
Identity = 430/439 (97.95%), Postives = 436/439 (99.32%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDS+TPLIPITPVEDEDATTETSSDYASPASVLNTS
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSQTPLIPITPVEDEDATTETSSDYASPASVLNTS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISS DPQLVHMPMSETNAT+TPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSSDPQLVHMPMSETNATMTPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSR VPVSSSLPSNGAP+KDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRGVPVSSSLPSNGAPLKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHG+NCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGSNCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           V EMPTSAKRTK+DREISS
Sbjct: 421 VSEMPTSAKRTKIDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. NCBI nr
Match: XP_022997031.1 (zinc finger CCCH domain-containing protein 6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 824 bits (2129), Expect = 7.18e-300
Identity = 429/471 (91.08%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPP--------------------------------NPSVVADSERANVDDSR 180
           AVYPRPSAIPP                                +PSVVADSERANVDDS+
Sbjct: 121 AVYPRPSAIPPKLITSFAPYSFCFGIGLFAILYTENPFGSHPYSPSVVADSERANVDDSQ 180

Query: 181 TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV 240
           TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV
Sbjct: 181 TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV 240

Query: 241 SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV 300
           SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV
Sbjct: 241 SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV 300

Query: 301 TSTQKPISSPDPQLVHMPMSETNATITPPFFSQPNGGSVAPVPNAHPSSRSVPVSSSLPS 360
           TSTQKPISS DPQLVHMPMSETNAT+TPPFFSQPNGGSVAPVPNAHPSSR VPVSSSLPS
Sbjct: 301 TSTQKPISSSDPQLVHMPMSETNATMTPPFFSQPNGGSVAPVPNAHPSSRGVPVSSSLPS 360

Query: 361 NGAPMKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM 420
           NGAP+KDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM
Sbjct: 361 NGAPLKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM 420

Query: 421 KPCIYFNSPRGCRHGANCAYQHDPVFQQRSSSVPEMPTSAKRTKVDREISS 439
           KPCIYFNSPRGCRHG+NCAYQHDPVFQQRSSSV EMPTSAKRTK+DREISS
Sbjct: 421 KPCIYFNSPRGCRHGSNCAYQHDPVFQQRSSSVSEMPTSAKRTKIDREISS 471

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL
Match: A0A6J1HG26 (zinc finger CCCH domain-containing protein 6-like OS=Cucurbita moschata OX=3662 GN=LOC111462672 PE=4 SV=1)

HSP 1 Score: 852 bits (2200), Expect = 1.57e-311
Identity = 436/439 (99.32%), Postives = 437/439 (99.54%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSR VPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRGVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQ LGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQHLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           VPEMPTSAKRTKVDREISS
Sbjct: 421 VPEMPTSAKRTKVDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL
Match: A0A6J1K3Q0 (zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492081 PE=4 SV=1)

HSP 1 Score: 843 bits (2177), Expect = 5.02e-308
Identity = 430/439 (97.95%), Postives = 436/439 (99.32%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           AVYPRPSAIPPNPSVVADSERANVDDS+TPLIPITPVEDEDATTETSSDYASPASVLNTS
Sbjct: 121 AVYPRPSAIPPNPSVVADSERANVDDSQTPLIPITPVEDEDATTETSSDYASPASVLNTS 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
           AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG
Sbjct: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITPPFFS 300
           NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISS DPQLVHMPMSETNAT+TPPFFS
Sbjct: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSSDPQLVHMPMSETNATMTPPFFS 300

Query: 301 QPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDPPRQQQF 360
           QPNGGSVAPVPNAHPSSR VPVSSSLPSNGAP+KDLNYYKSLIQQHGGERQDDPPRQQQF
Sbjct: 301 QPNGGSVAPVPNAHPSSRGVPVSSSLPSNGAPLKDLNYYKSLIQQHGGERQDDPPRQQQF 360

Query: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVFQQRSSS 420
           PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHG+NCAYQHDPVFQQRSSS
Sbjct: 361 PNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGSNCAYQHDPVFQQRSSS 420

Query: 421 VPEMPTSAKRTKVDREISS 439
           V EMPTSAKRTK+DREISS
Sbjct: 421 VSEMPTSAKRTKIDREISS 439

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL
Match: A0A6J1K6C9 (zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492081 PE=4 SV=1)

HSP 1 Score: 824 bits (2129), Expect = 3.47e-300
Identity = 429/471 (91.08%), Postives = 436/471 (92.57%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEES+EVVVENQREMRVLE
Sbjct: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESREVVVENQREMRVLE 120

Query: 121 AVYPRPSAIPP--------------------------------NPSVVADSERANVDDSR 180
           AVYPRPSAIPP                                +PSVVADSERANVDDS+
Sbjct: 121 AVYPRPSAIPPKLITSFAPYSFCFGIGLFAILYTENPFGSHPYSPSVVADSERANVDDSQ 180

Query: 181 TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV 240
           TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV
Sbjct: 181 TPLIPITPVEDEDATTETSSDYASPASVLNTSAQPSPFTPAGRSTSQHVLLNAMSSTSSV 240

Query: 241 SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV 300
           SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV
Sbjct: 241 SSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSIDRELLVNILNNPKMIEQLVVDSGVV 300

Query: 301 TSTQKPISSPDPQLVHMPMSETNATITPPFFSQPNGGSVAPVPNAHPSSRSVPVSSSLPS 360
           TSTQKPISS DPQLVHMPMSETNAT+TPPFFSQPNGGSVAPVPNAHPSSR VPVSSSLPS
Sbjct: 301 TSTQKPISSSDPQLVHMPMSETNATMTPPFFSQPNGGSVAPVPNAHPSSRGVPVSSSLPS 360

Query: 361 NGAPMKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM 420
           NGAP+KDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM
Sbjct: 361 NGAPLKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIM 420

Query: 421 KPCIYFNSPRGCRHGANCAYQHDPVFQQRSSSVPEMPTSAKRTKVDREISS 439
           KPCIYFNSPRGCRHG+NCAYQHDPVFQQRSSSV EMPTSAKRTK+DREISS
Sbjct: 421 KPCIYFNSPRGCRHGSNCAYQHDPVFQQRSSSVSEMPTSAKRTKIDREISS 471

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL
Match: A0A5A7VH57 (Zinc finger CCCH domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005120 PE=4 SV=1)

HSP 1 Score: 728 bits (1879), Expect = 1.36e-262
Identity = 386/445 (86.74%), Postives = 403/445 (90.56%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSG--SDD 60
           MRGLHKGKRVSWASDLNLRQVRLF SEDCPSQVGLGAQDHLQAKASWLLHSTGSG  SDD
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGSGLGSDD 60

Query: 61  TLPPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRV 120
           TLPPGFEVAH ENQ QIKLSQIPVNQWRCPPKFVLNLTW+VVVGEESQEV VENQREMRV
Sbjct: 61  TLPPGFEVAHPENQLQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRV 120

Query: 121 LEAVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLN 180
           LEAVYPR SAIPPNPSVV DSERA++DDSRTPLIPITPVEDED  TE+SSDYASPAS L 
Sbjct: 121 LEAVYPRASAIPPNPSVVPDSERASIDDSRTPLIPITPVEDEDGATESSSDYASPASGLM 180

Query: 181 TSAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNE 240
            SAQPSPF PAG STSQH LLNAM STS+VSSM G+D GN+ DVVAAASAAL ALVKSN+
Sbjct: 181 -SAQPSPFVPAGTSTSQHALLNAMCSTSNVSSMVGVDFGNERDVVAAASAALSALVKSND 240

Query: 241 IGNSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITP-- 300
           +GNSIDRELLVNILNNPKMIEQLVVDSG +TSTQKPI SPDP LVHM MS+TNATI P  
Sbjct: 241 VGNSIDRELLVNILNNPKMIEQLVVDSGALTSTQKPIPSPDPPLVHMHMSDTNATIMPIS 300

Query: 301 --PFFSQPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDP 360
             PF+SQPNGGSV PV NAHPSSR +PVSS LPS GAPM+DLNYYKSLIQQHGGERQDDP
Sbjct: 301 GSPFYSQPNGGSVGPVSNAHPSSRGIPVSS-LPSTGAPMRDLNYYKSLIQQHGGERQDDP 360

Query: 361 PRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVF 420
           PRQQ F NRHNQ  GTNQEFLQNQPSR+AKFKIMKPCIYFNS RGCRHGANCAYQHDP+F
Sbjct: 361 PRQQ-FGNRHNQPSGTNQEFLQNQPSRDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMF 420

Query: 421 QQRSSSVPEMPTSAKRTKVDREISS 439
           QQRSSSV EMP+S KRTKVDREISS
Sbjct: 421 QQRSSSVSEMPSS-KRTKVDREISS 441

[Close]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL
Match: A0A1S3BB52 (zinc finger CCCH domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC103488030 PE=4 SV=1)

HSP 1 Score: 728 bits (1879), Expect = 1.36e-262
Identity = 386/445 (86.74%), Postives = 403/445 (90.56%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSG--SDD 60
           MRGLHKGKRVSWASDLNLRQVRLF SEDCPSQVGLGAQDHLQAKASWLLHSTGSG  SDD
Sbjct: 1   MRGLHKGKRVSWASDLNLRQVRLFSSEDCPSQVGLGAQDHLQAKASWLLHSTGSGLGSDD 60

Query: 61  TLPPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRV 120
           TLPPGFEVAH ENQ QIKLSQIPVNQWRCPPKFVLNLTW+VVVGEESQEV VENQREMRV
Sbjct: 61  TLPPGFEVAHPENQLQIKLSQIPVNQWRCPPKFVLNLTWRVVVGEESQEVDVENQREMRV 120

Query: 121 LEAVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLN 180
           LEAVYPR SAIPPNPSVV DSERA++DDSRTPLIPITPVEDED  TE+SSDYASPAS L 
Sbjct: 121 LEAVYPRASAIPPNPSVVPDSERASIDDSRTPLIPITPVEDEDGATESSSDYASPASGLM 180

Query: 181 TSAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNE 240
            SAQPSPF PAG STSQH LLNAM STS+VSSM G+D GN+ DVVAAASAAL ALVKSN+
Sbjct: 181 -SAQPSPFVPAGTSTSQHALLNAMCSTSNVSSMVGVDFGNERDVVAAASAALSALVKSND 240

Query: 241 IGNSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATITP-- 300
           +GNSIDRELLVNILNNPKMIEQLVVDSG +TSTQKPI SPDP LVHM MS+TNATI P  
Sbjct: 241 VGNSIDRELLVNILNNPKMIEQLVVDSGALTSTQKPIPSPDPPLVHMHMSDTNATIMPIS 300

Query: 301 --PFFSQPNGGSVAPVPNAHPSSRSVPVSSSLPSNGAPMKDLNYYKSLIQQHGGERQDDP 360
             PF+SQPNGGSV PV NAHPSSR +PVSS LPS GAPM+DLNYYKSLIQQHGGERQDDP
Sbjct: 301 GSPFYSQPNGGSVGPVSNAHPSSRGIPVSS-LPSTGAPMRDLNYYKSLIQQHGGERQDDP 360

Query: 361 PRQQQFPNRHNQLLGTNQEFLQNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDPVF 420
           PRQQ F NRHNQ  GTNQEFLQNQPSR+AKFKIMKPCIYFNS RGCRHGANCAYQHDP+F
Sbjct: 361 PRQQ-FGNRHNQPSGTNQEFLQNQPSRDAKFKIMKPCIYFNSSRGCRHGANCAYQHDPMF 420

Query: 421 QQRSSSVPEMPTSAKRTKVDREISS 439
           QQRSSSV EMP+S KRTKVDREISS
Sbjct: 421 QQRSSSVSEMPSS-KRTKVDREISS 441

[Close]

BLAST of Cp4.1LG11g02420 vs. TAIR 10
Match: AT1G19860.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 289.3 bits (739), Expect = 5.3e-78
Identity = 196/449 (43.65%), Postives = 264/449 (58.80%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           MR LH  KRVSW  D  L QVRLF+SED PSQVG  +QDHLQAK+    H     SDD L
Sbjct: 1   MRALH--KRVSWPPDFKLCQVRLFISEDSPSQVGSESQDHLQAKSPLASHP----SDDNL 60

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGF    S N+SQIKLS IP+ +W+C  + +L+  W+VV G+ES+EV  +N+RE+RVLE
Sbjct: 61  PPGFGGPFSANESQIKLSDIPLIKWKCSVQILLDREWKVVAGDESKEVEAQNERELRVLE 120

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTS 180
           A YP  S+IPPNPSV AD E ++ DD +T +IPI PVED+D   +++SD+ + + V +  
Sbjct: 121 AFYPGASSIPPNPSVPADVEDSHHDDQQTIVIPILPVEDDDIAMDSASDFPTQSGV-DVG 180

Query: 181 AQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIG 240
            +PS             + +  +STSS +  AG D+           AAL A+  S E G
Sbjct: 181 TEPS-------------ITDENTSTSS-TLPAGPDI----------MAALSAISNSKEQG 240

Query: 241 NSIDRELLVNILNNPKMIEQLVVDSGVVTSTQKPISSPDPQLVHMPMSETNATI-TPPFF 300
           + ID++LL+ IL+NPK++E LV + G   S    +SS    L      E N  + T P  
Sbjct: 241 SMIDQDLLIKILSNPKLVENLVANRGSAGS----VSSNTSSLYSSSTHEANGVVTTAPIS 300

Query: 301 SQPNGGSVAPVPNAHPSSRSVPVSSSLPSNGA-PMKDLNYYKSLIQQHGGERQDDPPRQQ 360
           S     +  P+ +  P + +       P+ GA P +D +YYK+LIQQHGG+RQ+ PP  Q
Sbjct: 301 SNGQFYAQPPITHIPPMAYTPHAPQDQPNYGAPPARDASYYKNLIQQHGGDRQETPP-VQ 360

Query: 361 QFPNRHNQLL--GTNQEFL----QNQPSREAKFKIMKPCIYFNSPRGCRHGANCAYQHDP 420
               R+N     G N E +     NQ  R++K KIMK C+YFNS RGCRHGANC YQHD 
Sbjct: 361 HLGYRYNLQPGGGPNPEMVNSSNNNQRPRDSKPKIMKACMYFNSARGCRHGANCMYQHDA 413

Query: 421 V-FQQRSSSVPEMPTS----AKRTKVDRE 437
             +Q R+ +   + TS    AKR + DR+
Sbjct: 421 TPYQPRNLNNGNINTSDMQNAKRMRFDRD 413

[Close]

BLAST of Cp4.1LG11g02420 vs. TAIR 10
Match: AT3G51180.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-31
Identity = 157/554 (28.34%), Postives = 224/554 (40.43%), Query Frame = 0


Query: 6   KGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTLPPGFE 65
           K  RVSW     L QV++F +ED P+ V    Q H         + +       LPPGFE
Sbjct: 8   KKPRVSWPPGPKLCQVKVFRTEDSPANVASQPQRH--------SYPSRKPRGPDLPPGFE 67

Query: 66  VAHSENQSQIKLSQIPVNQW-RCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLEAVYP 125
             H   +  +  S IP  +W R PPKF +N TW V  G  S E   EN R  +VLEA+YP
Sbjct: 68  GNHYAVKPNV--SNIPRIKWKRPPPKFSVNDTWLVGCGGGSSEWQNENLRISKVLEAIYP 127

Query: 126 RPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDEDATTETSSDYASPASVLNTSAQPS 185
             SAIP  PSV    E    DDS+TP I +TP+EDE   +E+SS+ +S + V        
Sbjct: 128 HRSAIPSRPSVSPAVEAECFDDSKTPAIRLTPIEDE---SESSSEESSNSKV-------- 187

Query: 186 PFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEIGNSID 245
               +G + ++   L      S+   ++G+  G   D+  AASAAL AL+K+ E G+ +D
Sbjct: 188 ---ESGVTANKQGQLETKPLCSTQEQVSGL-TGLAPDLSLAASAALTALMKTKEQGSLVD 247

Query: 246 RELLVNILNNPKMIEQLVVDSG----------VVT---STQKPISSP-----------DP 305
            ELL+  L++PK+I+ L+ D+           +VT   S  +P+  P            P
Sbjct: 248 TELLIKFLSDPKLIKNLITDTSGKSSETKNQPIVTNINSATRPVPQPVSAVTASPMARKP 307

Query: 306 QLVHMPMSETNAT----------ITPPFFSQPNGGSVAPVP--NAHPSSRSVPV------ 365
           Q V +P   + A           ++PP   +P  GS++P       PSS  +PV      
Sbjct: 308 QPVIIPQEHSVAVSRSFTNPERRVSPP---KPVNGSISPPKPITGKPSSIPMPVHFHVGI 367

Query: 366 -----------SSSLPSN------------------------------------------ 425
                      SSSLP N                                          
Sbjct: 368 AKEQPQPARFPSSSLPMNLNFHRPPNVFSEPKVIVNPQPQHQPYSAFRTSEMNYVQSSIG 427

Query: 426 ----------------------------GAPMKDLNYYKSLIQQHGGERQDDPPRQQQFP 436
                                         PMK L+Y+K+LI++HG +  +         
Sbjct: 428 LGRGPQTGFNSYPMNFSRADAIGSAKPVVQPMKGLDYFKNLIREHGTDNHE--------T 487

[Close]

BLAST of Cp4.1LG11g02420 vs. TAIR 10
Match: AT5G66270.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 133.3 bits (334), Expect = 4.9e-31
Identity = 149/526 (28.33%), Postives = 212/526 (40.30%), Query Frame = 0


Query: 1   MRGLHKGKRVSWASDLNLRQVRLFLSEDCPSQVGLGAQDHLQAKASWLLHSTGSGSDDTL 60
           M+   KG RVSWASD  L QV+LFLS+DCP +V                          L
Sbjct: 2   MKKTKKG-RVSWASDSMLCQVKLFLSDDCPVKVA-----------------------SNL 61

Query: 61  PPGFEVAHSENQSQIKLSQIPVNQWRCPPKFVLNLTWQVVVGEESQEVVVENQREMRVLE 120
           PPGFE   ++  ++  +S IP  +W+ PP FVL+    V  G +S E   EN R  +VLE
Sbjct: 62  PPGFEA--TDYATKRIISHIPRIKWKRPPLFVLDDALLVGSGGKSIETRSENLRISKVLE 121

Query: 121 AVYPRPSAIPPNPSVVADSERANVDDSRTPLIPITPVEDE-DATTETSSDYASPASVLNT 180
           A YP  S IP  PS+    E  + DD +TP IP+T VEDE DA  E+S  + +PA+V   
Sbjct: 122 AFYPHRSVIPSRPSLTLAVEEEHYDDGKTPNIPLTHVEDERDAAAESSHSFEAPAAV--- 181

Query: 181 SAQPSPFTPAGRSTSQHVLLNAMSSTSSVSSMAGMDLGNKHDVVAAASAALGALVKSNEI 240
                                         S  G +L         ASAAL AL K  E 
Sbjct: 182 ------------------------------SGLGPELS------LLASAALSALTK--EQ 241

Query: 241 GNSIDRELLVNILNNPKMIEQLV------------------------VDSGVVTSTQKPI 300
           G+ +D +LLV +L++PK++E L+                            V ++T    
Sbjct: 242 GSQVDPDLLVKLLSDPKIVENLINGMKGKPLETANNSLNTDITEPRLAPQHVTSTTMDRN 301

Query: 301 SSPDPQLV---HMPMSETNATITPPF--FSQPNGGSVA---------PVPNAHPSSRSVP 360
             P P  V   ++P+S  ++   PP    +QP   +++         PV + +P S  + 
Sbjct: 302 PPPMPGNVAPHNVPVSVQSSATDPPLPKPNQPMSSALSMNLTLQKPTPVVHNYPLSSGIK 361

Query: 361 VSSSL------PSNG--------------------------------------------- 420
           V  S       PS G                                             
Sbjct: 362 VEDSYTAAPLKPSTGDDVVVSEQKTQLLFPCSSWNMNKVPESARTETDPQIRNGNTNRDD 421

Query: 421 ----APMKDLNYYKSLIQQHGGERQDDPPRQQQFPNRHNQLLGTNQEFLQNQPSREAKFK 433
                P+KDL+Y+K+LI++HG  +    P   +  N   ++             +  K +
Sbjct: 422 QVSAKPVKDLDYFKNLIREHGAVK----PATTETNNYKGRV----------DHKKIVKVR 446

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q56XU4	7.5e-77	43.65	Zinc finger CCCH domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q7XM16	1.4e-67	36.19	Zinc finger CCCH domain-containing protein 30 OS=Oryza sativa subsp. japonica OX...	[more]
Q94C33	4.0e-30	28.34	Zinc finger CCCH domain-containing protein 45 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9FH61	6.8e-30	28.33	Zinc finger CCCH domain-containing protein 68 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cp4.1LG11g02420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546238.1	1.68e-313	100.00	zinc finger CCCH domain-containing protein 6-like [Cucurbita pepo subsp. pepo] >...	[more]
XP_022962124.1	3.24e-311	99.32	zinc finger CCCH domain-containing protein 6-like [Cucurbita moschata] >KAG70294...	[more]
KAG6598491.1	1.08e-309	98.86	Zinc finger CCCH domain-containing protein 6, partial [Cucurbita argyrosperma su...	[more]
XP_022997032.1	1.04e-307	97.95	zinc finger CCCH domain-containing protein 6-like isoform X2 [Cucurbita maxima]	[more]
XP_022997031.1	7.18e-300	91.08	zinc finger CCCH domain-containing protein 6-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG11g02420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HG26	1.57e-311	99.32	zinc finger CCCH domain-containing protein 6-like OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1K3Q0	5.02e-308	97.95	zinc finger CCCH domain-containing protein 6-like isoform X2 OS=Cucurbita maxima...	[more]
A0A6J1K6C9	3.47e-300	91.08	zinc finger CCCH domain-containing protein 6-like isoform X1 OS=Cucurbita maxima...	[more]
A0A5A7VH57	1.36e-262	86.74	Zinc finger CCCH domain-containing protein 6 OS=Cucumis melo var. makuwa OX=1194...	[more]
A0A1S3BB52	1.36e-262	86.74	zinc finger CCCH domain-containing protein 6 OS=Cucumis melo OX=3656 GN=LOC10348...	[more]

BLAST of Cp4.1LG11g02420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19860.1	5.3e-78	43.65	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT3G51180.1	2.8e-31	28.34	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT5G66270.1	4.9e-31	28.33	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..334
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 293..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 416..439
None	No IPR available	PANTHER	PTHR33400:SF2	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6	coord: 1..434
None	No IPR available	PANTHER	PTHR33400	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED	coord: 1..434
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 385..413 score: 11.901249
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 390..423

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02420.1	Cp4.1LG11g02420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding