Cp4.1LG11g02360 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02360
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	V-type proton ATPase subunit a
Location	Cp4.1LG11: 1241860 .. 1244070 (-)
RNA-Seq Expression	Cp4.1LG11g02360
Synteny	Cp4.1LG11g02360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCATGCAGGTATCAAACAGTGTAAATCAACTCATTGTGGGCTATATTCCTCCGTGCGAGTGACTTATATCCTCCGTTTTCCAGAGATACTAATACCATTGGTTTAATAAAGGTTCGTGACGCGTATCCATTTGGTGTGGATCTGAAGTGGCAAGGCACTCGAAGTGAGTGACCTTTTCTCAAATCTTTGAAGATGAAGATGTCTATACTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTGTTTGGAGAAAACATTAACATCTGGTGAGTTGCTTTAAGATGGATCCATTATATCATCATTAAAATAATTTCTTTATTGAATTATTAATTAATTGGCAGTCTTTCTGTAGAATTAGTTGTTTGAAAATTTTCCTCCGGATGGCGGATTCTTGAATGAGATGTAATGTAGTCAATTATGTGCAATTGATGAATAAACTTAAAAAAAAAGAGTTTATCTAGTGAGTTAGTTGTGGAAGAATCATCTCCTCAAAACAACCACATCCTAAAATTCTAAATACTGTAACTTAAGAGCCATGAGATTTCCTTTTCAAATTTATCACATTTTAATACAAGAATCCGATCTTCTATTTCCAGTGTGAAGATTCTGTTTTCTTTATTCTAACAAGTGTAAATTTTGTTTCATTGTTTCAGGTACCAATTTGTTCCACAGATGATTTTCATCAACAGTTTATATGGTTACCTCTCACTTCTCATAATTGTAAAGTGGTGCTCTGGATCTCAAGCTAACCTGTATCACGTAATGATGTAAATGTTCTTTAGTCCTACAGATGATCTAGGCGAAAACCAGCTTTTGCCAGGACAGAAGTTACAACTGTTAATAACTATATTTTTACAATTTCAGCATCTGTTAATTCTGTCTGCCCTCACTGCCGTCTCGGTTGAAGAAACAACATGAAGAAGTAGGCGATGTTATATTTTTTTCGTCTCTTATAGCAGCTTCTATATTTTATTTTGTTGTACTTTTCCTTGCCATTCACTGCTAATTTCTGATCTCATCTTTGCCAGAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAGGAGTTCGAGTTAGTGAGGTTTTTGTACACCAGCTTATACATTCCGTAGAGTTCGTACTTGGTGCAGTTTCTAAAACACCATCCTATCTACGCGTATGGGCCCTCAGGTAAAAAATAAATACATTTTACCATTATTCTAACCTAAATGCTGCTACACTTAGATGCATTAACGTTTATAGGAATCTGTGAGCTACTGAATTAGTAATGCAGAGATACCATTAGTATCTGAAATATCAATTTACGTTACTAAAAAAGAGTCGTAGTTTTTTACCTTTTTGACAAATTATACCCGCCATTTTTAAAATGGATTTGAACATTCATGTAGCTTGCGAGTGTAAGGATCATACCCTCCTGTTATTTTGCTTTAACGAAACTGGTATTCACGGGAAGTGAAAAATAAATCCGACTACCAAGCCTATCATAGTAATACCTATGCTAATTAGAGGGATGTTTGAAATTAAAACTAGATCTTAGAAAGTGTGATTTCTAACAGTAGTCCCTTTACTCTTAAATGTATAAATATATTCAAATGCGTTCTTCAGGTCCAAATTTCTATATTTAGATAGCGCTATCATTTATAAGCTTTTTAGTCGAGATACACGTAACTTTTGATTGTGGTATCATTTATAGTTAAACTACTGATATTTCTTTCATTAGTTATCTACCTATTTTACGTTTTTCTCTTTCACTCAGCCAAGCGCATTCGGAGTTCTCGAGTGTATTTTACAAGGTTCTACTCCTAGCTTGGGGGTTGGTTCTGCCACACCTTTTATTTTTCTTCCTCTTTTCAACAAAAATGCATTGGGGGAATCAGTAAGATGATAACCATTTACTTCTTGACATCTGCAGGTTCAATAGTGTTTGATCATCCGGATGGTGTAAGAATAGCCATTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGGGCTCCACTGGGTGGAGTTTCAGAAGAAATCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGACGACATATTTCTGAAGCTTGGCCATCAACTCAACTCCCAAGGAAAATCGAGAGGTTAG

mRNA sequence

ATGCTTCATGCAGATGAAGATGTCTATACTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTGTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATTTTCATCAACAGTTTATATGGTTACCTCTCACTTCTCATAATTGTAAAGTGGTGCTCTGGATCTCAAGCTAACCTGTATCACAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAGGAGTTCGAGTTCAATAGTGTTTGATCATCCGGATGGTGTAAGAATAGCCATTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGGGCTCCACTGGGTGGAGTTTCAGAAGAAATCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGACGACATATTTCTGAAGCTTGGCCATCAACTCAACTCCCAAGGAAAATCGAGAGGTTAG

Coding sequence (CDS)

ATGCTTCATGCAGATGAAGATGTCTATACTACTGGAGTAGCTCAAATGAACAGAGGAATTATATTGAGCTACTTCAAAGCAAAATTGTTTGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATTTTCATCAACAGTTTATATGGTTACCTCTCACTTCTCATAATTGTAAAGTGGTGCTCTGGATCTCAAGCTAACCTGTATCACAGGCACCAAGGTCAATCCTACTCCCTACTTCACAGCACAATCTTGAAATGGAACGATGCCACGGTTCCCACGGCCACGAGGAGTTCGAGTTCAATAGTGTTTGATCATCCGGATGGTGTAAGAATAGCCATTTTCATTTGTGCAACTGTCGGAGTTTTACTAGTTCTAAGCGCTTTCCTGCCCGCCTTGGGGCTCCACTGGGTGGAGTTTCAGAAGAAATCTTCTCGTTTTCGTTGCACCGGGAGAAGGATGAGTGACGACATATTTCTGAAGCTTGGCCATCAACTCAACTCCCAAGGAAAATCGAGAGGTTAG

Protein sequence

MLHADEDVYTTGVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLYHRHQGQSYSLLHSTILKWNDATVPTATRSSSSIVFDHPDGVRIAIFICATVGVLLVLSAFLPALGLHWVEFQKKSSRFRCTGRRMSDDIFLKLGHQLNSQGKSRG

Homology

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot
Match: Q8W4S4 (V-type proton ATPase subunit a3 OS=Arabidopsis thaliana OX=3702 GN=VHA-a3 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 8.0e-22
Identity = 79/246 (32.11%), Postives = 106/246 (43.09%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GV+QMN GII+SYF A+ F  ++NIW+QF+PQMIF+NSL+GYLS+LII+KWC+GSQA+LY
Sbjct: 554 GVSQMNLGIIMSYFNARFFKSSVNIWFQFIPQMIFLNSLFGYLSVLIIIKWCTGSQADLY 613

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 614 HVMIYMFLSPMDELGENQLFPHQKTLQLVLLFLALVSVPCMLLPKPFILKKQHEARHQGQ 673

Query: 132 SYSLLHST----------------------------ILKWNDATVPTATRSSS-----SI 146
           +Y+ L  T                            ++   +  +   + ++S     ++
Sbjct: 674 AYAPLDETDESLHVETNGGGSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWAL 733

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot
Match: Q9SJT7 (V-type proton ATPase subunit a2 OS=Arabidopsis thaliana OX=3702 GN=VHA-a2 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 8.8e-21
Identity = 80/245 (32.65%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GII+S+F AK F   +NIW+QFVPQMIF+N L+GYLS+LII+KWC+GSQA+LY
Sbjct: 555 GVAQMNLGIIMSFFNAKFFKSAVNIWFQFVPQMIFLNCLFGYLSVLIIIKWCTGSQADLY 614

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQG 
Sbjct: 615 HVMIYMFLSPMDDLGENQLFPNQKIVQLTFLFLALVSVPWMLLPKPFILKKQHEARHQGL 674

Query: 132 SYSLLHST---------------------------ILKWNDATVPTATRSSS-----SIV 146
           SY+ L  T                           ++   +  +   + ++S     ++ 
Sbjct: 675 SYAQLDETDESLQVETNGGGHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALS 734

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot
Match: Q8RWZ7 (V-type proton ATPase subunit a1 OS=Arabidopsis thaliana OX=3702 GN=VHA-a1 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-20
Identity = 43/61 (70.49%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           G+AQMN G+ILS+F A+ FG +++I YQF+PQMIF+NSL+GYLSLLII+KWC+GSQA+LY
Sbjct: 553 GIAQMNLGLILSFFNARFFGSSLDIRYQFIPQMIFLNSLFGYLSLLIIIKWCTGSQADLY 612

Query: 72  H 73
           H
Sbjct: 613 H 613

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot
Match: Q9HBG4 (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens OX=9606 GN=ATP6V0A4 PE=1 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 1.9e-07
Identity = 27/52 (51.92%), Postives = 34/52 (65.38%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWC 64
           G+ QM  G+ILS F    F   +NI  QF+P+MIFI  L+GYL  +II KWC
Sbjct: 548 GIVQMVFGVILSLFNHIYFRRTLNIILQFIPEMIFILCLFGYLVFMIIFKWC 599

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot
Match: Q920R6 (V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus OX=10090 GN=Atp6v0a4 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.5e-07
Identity = 39/123 (31.71%), Postives = 62/123 (50.41%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           G+A M  G+ILS F    F   +NI  QF+P+MIF+ SL+GYL  +II KWC        
Sbjct: 548 GIAHMIFGVILSLFNHIYFRRTLNIILQFIPEMIFMLSLFGYLVFMIIFKWC-------- 607

Query: 72  HRHQGQSYSLLHSTILKWNDATVPTATRSSSSIVFDHPDGVRIAIFICATVGV--LLVLS 131
            R+   +     S ++ +    +     SS++ ++ H   V+    I A V V  +L++ 
Sbjct: 608 -RYDAHTSRKAPSILIHFIGMFLFDYDDSSNAPLYGHQQEVQTFFVIIALVSVPWMLLIK 661

Query: 132 AFL 133
            F+
Sbjct: 668 PFV 661

[Close]

BLAST of Cp4.1LG11g02360 vs. NCBI nr
Match: BBG94868.1 (vacuolar proton ATPase A3, partial [Prunus dulcis])

HSP 1 Score: 140 bits (353), Expect = 6.73e-35
Identity = 95/215 (44.19%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FG+N+NIWYQFVPQ+IF+NSL+GYLSLLIIVKWC+GSQA+LY
Sbjct: 567 GVAQMNLGIILSYFNAKFFGDNLNIWYQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLY 626

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 627 HVMIYMFLSPTDDLGENQLFLGQKFLQILLLLSALVAVPWMLFPKPYLLKKQHEERHQGQ 686

Query: 132 SYSLLHSTILKWNDATV-----------PTATRSS-SSIVFDH----PDG--------VR 145
           SY+LLH       + T+           P+   S  SS+ +D       G        + 
Sbjct: 687 SYALLHGGDDPLEEDTIKVCMVMRNLNSPSLAHSELSSVFYDKILLLARGFNNVIILIIG 746

[Close]

BLAST of Cp4.1LG11g02360 vs. NCBI nr
Match: OIV97608.1 (hypothetical protein TanjilG_12365 [Lupinus angustifolius])

HSP 1 Score: 139 bits (351), Expect = 9.42e-35
Identity = 91/199 (45.73%), Postives = 103/199 (51.76%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GV+QMN GIILSY+ AK F  NINI +QFVPQMIF+NSL+GYLSLLIIVKWC+GS+A+LY
Sbjct: 472 GVSQMNLGIILSYYNAKYFENNINIRHQFVPQMIFLNSLFGYLSLLIIVKWCTGSKADLY 531

Query: 72  HRHQGQSYSLLHSTILKWNDATVPTATRSSSSIVFDHPDG-------------------- 131
           HRHQGQSYSLL+S       A        S SI  DH D                     
Sbjct: 532 HRHQGQSYSLLYS-------AEEDPHEPESQSIPLDHEDFEFSEVFVHQLIHTIEFVLGA 591

Query: 132 ------------------------------------------VRIAIFICATVGVLLV-- 145
                                                     + I +FICATVGVLL+  
Sbjct: 592 VSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIIGIIVFICATVGVLLLME 651

[Close]

BLAST of Cp4.1LG11g02360 vs. NCBI nr
Match: XP_038884967.1 (V-type proton ATPase subunit a2-like isoform X3 [Benincasa hispida])

HSP 1 Score: 139 bits (349), Expect = 2.27e-34
Identity = 97/217 (44.70%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FGENINIWYQFVPQMIF+NSL+GYLSLLIIVKW SGSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWYSGSQADLY 601

Query: 72  H--------------------------RHQGQSYSLLHSTI----------------LKW 131
           H                          RHQGQSYS+L ST                  ++
Sbjct: 602 HVMIYMFLSPTDDLGENQLFPGQKFLQRHQGQSYSVLQSTDDNQEMEQHHGSHGHEEFEF 661

Query: 132 NDATV--------------------------PTATRSSSSIVFDHP------------DG 145
           ++  V                            A    SS+ +D                
Sbjct: 662 SEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSLIIRI 721

[Close]

BLAST of Cp4.1LG11g02360 vs. NCBI nr
Match: XP_022144381.1 (V-type proton ATPase subunit a2-like [Momordica charantia])

HSP 1 Score: 138 bits (347), Expect = 4.39e-34
Identity = 101/247 (40.89%), Postives = 110/247 (44.53%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FGENINIWYQFVPQMIF+NSL+GYLSLLIIVKWCSGSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLY 601

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 602 HIMIYMFLSPTDDLGENQLFPGQKFLQLMLLLSALIAVPWMLLPKPFLLKKQHEERHQGQ 661

Query: 132 SYSLLHSTILKWNDAT-------------------------------------------- 145
           SYSL+HST    ND T                                            
Sbjct: 662 SYSLIHST--DDNDETEHSHGSHSHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWA 721

[Close]

BLAST of Cp4.1LG11g02360 vs. NCBI nr
Match: PQM38557.1 (V-type proton ATPase subunit a3-like [Prunus yedoensis var. nudiflora])

HSP 1 Score: 136 bits (343), Expect = 1.48e-33
Identity = 97/219 (44.29%), Postives = 110/219 (50.23%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FG+N+NIWYQFVPQ+IF+NSL+GYLSLLIIVKWC+GSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFGDNLNIWYQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLY 601

Query: 72  H----------------------------RHQGQSYSLLHS------------------- 131
           H                            RHQGQSY+LLH                    
Sbjct: 602 HILLLLLALVAVPWMLFPKPYLLKKQHEERHQGQSYALLHGGDDPLEEDHHQSLHGHEEF 661

Query: 132 ------------TILKWNDATVPTAT-----------RSSSSIVFDH----PDG------ 145
                       TI     A   TA+              SS+ +D       G      
Sbjct: 662 EFTEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKILLLAWGFNNVII 721

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL
Match: A0A4Y1QSS0 (V-type proton ATPase subunit a (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_003255 PE=3 SV=1)

HSP 1 Score: 140 bits (353), Expect = 3.26e-35
Identity = 95/215 (44.19%), Postives = 110/215 (51.16%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FG+N+NIWYQFVPQ+IF+NSL+GYLSLLIIVKWC+GSQA+LY
Sbjct: 567 GVAQMNLGIILSYFNAKFFGDNLNIWYQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLY 626

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 627 HVMIYMFLSPTDDLGENQLFLGQKFLQILLLLSALVAVPWMLFPKPYLLKKQHEERHQGQ 686

Query: 132 SYSLLHSTILKWNDATV-----------PTATRSS-SSIVFDH----PDG--------VR 145
           SY+LLH       + T+           P+   S  SS+ +D       G        + 
Sbjct: 687 SYALLHGGDDPLEEDTIKVCMVMRNLNSPSLAHSELSSVFYDKILLLARGFNNVIILIIG 746

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL
Match: A0A4P1QY48 (V-type proton ATPase subunit a OS=Lupinus angustifolius OX=3871 GN=TanjilG_12365 PE=3 SV=1)

HSP 1 Score: 139 bits (351), Expect = 4.56e-35
Identity = 91/199 (45.73%), Postives = 103/199 (51.76%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GV+QMN GIILSY+ AK F  NINI +QFVPQMIF+NSL+GYLSLLIIVKWC+GS+A+LY
Sbjct: 472 GVSQMNLGIILSYYNAKYFENNINIRHQFVPQMIFLNSLFGYLSLLIIVKWCTGSKADLY 531

Query: 72  HRHQGQSYSLLHSTILKWNDATVPTATRSSSSIVFDHPDG-------------------- 131
           HRHQGQSYSLL+S       A        S SI  DH D                     
Sbjct: 532 HRHQGQSYSLLYS-------AEEDPHEPESQSIPLDHEDFEFSEVFVHQLIHTIEFVLGA 591

Query: 132 ------------------------------------------VRIAIFICATVGVLLV-- 145
                                                     + I +FICATVGVLL+  
Sbjct: 592 VSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNTIVLIIGIIVFICATVGVLLLME 651

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL
Match: A0A6J1CT88 (V-type proton ATPase subunit a OS=Momordica charantia OX=3673 GN=LOC111014074 PE=3 SV=1)

HSP 1 Score: 138 bits (347), Expect = 2.13e-34
Identity = 101/247 (40.89%), Postives = 110/247 (44.53%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FGENINIWYQFVPQMIF+NSL+GYLSLLIIVKWCSGSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLY 601

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 602 HIMIYMFLSPTDDLGENQLFPGQKFLQLMLLLSALIAVPWMLLPKPFLLKKQHEERHQGQ 661

Query: 132 SYSLLHSTILKWNDAT-------------------------------------------- 145
           SYSL+HST    ND T                                            
Sbjct: 662 SYSLIHST--DDNDETEHSHGSHSHEEFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWA 721

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL
Match: A0A314UM14 (V-type proton ATPase subunit a OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_11574 PE=3 SV=1)

HSP 1 Score: 136 bits (343), Expect = 7.17e-34
Identity = 97/219 (44.29%), Postives = 110/219 (50.23%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK FG+N+NIWYQFVPQ+IF+NSL+GYLSLLIIVKWC+GSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFGDNLNIWYQFVPQIIFLNSLFGYLSLLIIVKWCTGSQADLY 601

Query: 72  H----------------------------RHQGQSYSLLHS------------------- 131
           H                            RHQGQSY+LLH                    
Sbjct: 602 HILLLLLALVAVPWMLFPKPYLLKKQHEERHQGQSYALLHGGDDPLEEDHHQSLHGHEEF 661

Query: 132 ------------TILKWNDATVPTAT-----------RSSSSIVFDH----PDG------ 145
                       TI     A   TA+              SS+ +D       G      
Sbjct: 662 EFTEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKILLLAWGFNNVII 721

[Close]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL
Match: A0A6J1GGT7 (V-type proton ATPase subunit a OS=Cucurbita moschata OX=3662 GN=LOC111454061 PE=3 SV=1)

HSP 1 Score: 132 bits (331), Expect = 3.07e-32
Identity = 102/250 (40.80%), Postives = 108/250 (43.20%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GIILSYF AK F E INIWYQFVPQMIF+NSL+GYLSLLIIVKWCSGSQA+LY
Sbjct: 542 GVAQMNLGIILSYFNAKFFEEKINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLY 601

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 602 HVMIYMFLSPTDDLGENELFPGQQFVQVLLLLAALTAVPWMLLPKPFLLRKQNAERHQGQ 661

Query: 132 SYSLLHSTILKWNDATVPTATRSSS--------SIVFDHP-------------------- 145
           SYSLLH T     D  + T    SS        S VF H                     
Sbjct: 662 SYSLLHGT-----DDNLETKQHHSSPSHDDFDFSEVFVHQLIHTIEFVLGAVSNTASYLR 721

[Close]

BLAST of Cp4.1LG11g02360 vs. TAIR 10
Match: AT4G39080.1 (vacuolar proton ATPase A3 )

HSP 1 Score: 105.1 bits (261), Expect = 5.7e-23
Identity = 79/246 (32.11%), Postives = 106/246 (43.09%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GV+QMN GII+SYF A+ F  ++NIW+QF+PQMIF+NSL+GYLS+LII+KWC+GSQA+LY
Sbjct: 554 GVSQMNLGIIMSYFNARFFKSSVNIWFQFIPQMIFLNSLFGYLSVLIIIKWCTGSQADLY 613

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQGQ
Sbjct: 614 HVMIYMFLSPMDELGENQLFPHQKTLQLVLLFLALVSVPCMLLPKPFILKKQHEARHQGQ 673

Query: 132 SYSLLHST----------------------------ILKWNDATVPTATRSSS-----SI 146
           +Y+ L  T                            ++   +  +   + ++S     ++
Sbjct: 674 AYAPLDETDESLHVETNGGGSHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWAL 733

[Close]

BLAST of Cp4.1LG11g02360 vs. TAIR 10
Match: AT2G21410.1 (vacuolar proton ATPase A2 )

HSP 1 Score: 101.7 bits (252), Expect = 6.3e-22
Identity = 80/245 (32.65%), Postives = 103/245 (42.04%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           GVAQMN GII+S+F AK F   +NIW+QFVPQMIF+N L+GYLS+LII+KWC+GSQA+LY
Sbjct: 555 GVAQMNLGIIMSFFNAKFFKSAVNIWFQFVPQMIFLNCLFGYLSVLIIIKWCTGSQADLY 614

Query: 72  H------------------------------------------------------RHQGQ 131
           H                                                      RHQG 
Sbjct: 615 HVMIYMFLSPMDDLGENQLFPNQKIVQLTFLFLALVSVPWMLLPKPFILKKQHEARHQGL 674

Query: 132 SYSLLHST---------------------------ILKWNDATVPTATRSSS-----SIV 146
           SY+ L  T                           ++   +  +   + ++S     ++ 
Sbjct: 675 SYAQLDETDESLQVETNGGGHGHEEFEFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALS 734

[Close]

BLAST of Cp4.1LG11g02360 vs. TAIR 10
Match: AT2G28520.1 (vacuolar proton ATPase A1 )

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-21
Identity = 43/61 (70.49%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 12  GVAQMNRGIILSYFKAKLFGENINIWYQFVPQMIFINSLYGYLSLLIIVKWCSGSQANLY 71
           G+AQMN G+ILS+F A+ FG +++I YQF+PQMIF+NSL+GYLSLLII+KWC+GSQA+LY
Sbjct: 553 GIAQMNLGLILSFFNARFFGSSLDIRYQFIPQMIFLNSLFGYLSLLIIIKWCTGSQADLY 612

Query: 72  H 73
           H
Sbjct: 613 H 613

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W4S4	8.0e-22	32.11	V-type proton ATPase subunit a3 OS=Arabidopsis thaliana OX=3702 GN=VHA-a3 PE=1 S...	[more]
Q9SJT7	8.8e-21	32.65	V-type proton ATPase subunit a2 OS=Arabidopsis thaliana OX=3702 GN=VHA-a2 PE=1 S...	[more]
Q8RWZ7	1.5e-20	70.49	V-type proton ATPase subunit a1 OS=Arabidopsis thaliana OX=3702 GN=VHA-a1 PE=2 S...	[more]
Q9HBG4	1.9e-07	51.92	V-type proton ATPase 116 kDa subunit a isoform 4 OS=Homo sapiens OX=9606 GN=ATP6...	[more]
Q920R6	2.5e-07	31.71	V-type proton ATPase 116 kDa subunit a isoform 4 OS=Mus musculus OX=10090 GN=Atp...	[more]

BLAST of Cp4.1LG11g02360 vs. NCBI nr


Match Name	E-value	Identity	Description
BBG94868.1	6.73e-35	44.19	vacuolar proton ATPase A3, partial [Prunus dulcis]	[more]
OIV97608.1	9.42e-35	45.73	hypothetical protein TanjilG_12365 [Lupinus angustifolius]	[more]
XP_038884967.1	2.27e-34	44.70	V-type proton ATPase subunit a2-like isoform X3 [Benincasa hispida]	[more]
XP_022144381.1	4.39e-34	40.89	V-type proton ATPase subunit a2-like [Momordica charantia]	[more]
PQM38557.1	1.48e-33	44.29	V-type proton ATPase subunit a3-like [Prunus yedoensis var. nudiflora]	[more]

BLAST of Cp4.1LG11g02360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y1QSS0	3.26e-35	44.19	V-type proton ATPase subunit a (Fragment) OS=Prunus dulcis OX=3755 GN=Prudu_0032...	[more]
A0A4P1QY48	4.56e-35	45.73	V-type proton ATPase subunit a OS=Lupinus angustifolius OX=3871 GN=TanjilG_12365...	[more]
A0A6J1CT88	2.13e-34	40.89	V-type proton ATPase subunit a OS=Momordica charantia OX=3673 GN=LOC111014074 PE...	[more]
A0A314UM14	7.17e-34	44.29	V-type proton ATPase subunit a OS=Prunus yedoensis var. nudiflora OX=2094558 GN=...	[more]
A0A6J1GGT7	3.07e-32	40.80	V-type proton ATPase subunit a OS=Cucurbita moschata OX=3662 GN=LOC111454061 PE=...	[more]

BLAST of Cp4.1LG11g02360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39080.1	5.7e-23	32.11	vacuolar proton ATPase A3	[more]
AT2G21410.1	6.3e-22	32.65	vacuolar proton ATPase A2	[more]
AT2G28520.1	1.1e-21	70.49	vacuolar proton ATPase A1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	PFAM	PF01496	V_ATPase_I	coord: 12..82 e-value: 1.2E-16 score: 59.9
IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	PANTHER	PTHR11629	VACUOLAR PROTON ATPASES	coord: 112..146
IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	PANTHER	PTHR11629	VACUOLAR PROTON ATPASES	coord: 11..72
None	No IPR available	PANTHER	PTHR11629:SF100	V-TYPE PROTON ATPASE SUBUNIT A	coord: 112..146
None	No IPR available	PANTHER	PTHR11629:SF100	V-TYPE PROTON ATPASE SUBUNIT A	coord: 11..72

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02360.1	Cp4.1LG11g02360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	proton transmembrane transporter activity