Cp4.1LG11g02330 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g02330
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	thioredoxin H-type-like
Location	Cp4.1LG11: 1208177 .. 1210162 (-)
RNA-Seq Expression	Cp4.1LG11g02330
Synteny	Cp4.1LG11g02330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTTGTTTTTTCATTTGTTTCTAAAAAAACATAAATAAGAGTAATATTTTTATTTATCCAATGCATCGTAAATATTTTAAAATAAACATAATTTTTATTATAATTTTAAAATTTTATTTTCATTTAAAATTTTCAGATGGACATTTATTAAAAAAAGAAAAAAAAAAAAACGAGGAACCGTAGACCAGTCTCACCCCTCGTTCTATAAATACCGGCCCATAGCCAACCTGTATCGTTGCTGTTTTTGATACAGAGAACAATTTTTGGTGTTCTCCGATTTCTGTGTAAGCCAATGGCTCAAGAAGGAAATGTGATTGCCTGTCGTAGTACTTCTGAATGGAATGCTGTATTGTTGAAAGAATCTGGAAAACTGGTATAGTCTTTTGATTTTTCAGATTCTTCATTTCTACATTTTAATGGATTCCGATGGATTTTTCGATTTAGTGGATAGGTATGTGAAAAGCACTTTCACGTTTCTTGATTCCTTTTGCCTTTTCTTTTTCTATTCTTTTCCTGTTTAGAGATTGTTCAATGTTTTGGTAAAAGTCGCGATGGATTCGCCAGAATTTCTGATCTCTTAGGCTAATTATATATTCGATTTATCAATATTGAATGATCGTGTTGAAATTTATGATATCTAGGTTTTCTTTTTAACGTCTTAGTGGAATCGTTTGATTTGTATTCTTCAGGACTTCAATCCTTCACTGTTACACTTTTCCTTTTTCTTTAGTAAGACCTTGAACTTGATTGTGCCATTTTGCTTGACCACAATTGACTGATTCTGTCTTACAGGCTACTATTACAGTTTGTGTCAATTTTTTGTTCCCGATGTTTCTTAAGTTTTGCTTTGATAGATTGTGGTGCATTTTACTGCTCCCTGGTGCGGGCCACGCCGTTTAATTGCTCCATATTTCTCACAATTGGCTAAGAATCATCCTAGTGTCATTTTCCTGGAAGTAGACGTCGATGAATTGAAAGTAAAGATACTTGAGCTCTTTTTGTTCTTTCCTATCCATCACATCATATTTCAACAGTTCTGTTTCTTGAAGATATTGTTGTATACTGTAGCATGTGCTAGAGCTCTTTTCTTTTTTACTTGATCCCAACAGTGACTTCTGTTTCTCTCTGCAGCGTGTTGCTTTCAAGTGGGATATTGAGGCATTACCGACGTTTATTTTCCTGAAAAGAGGGCAAAAATCTCACAGGATTGTTGGTACTGATAGAGCGGCGCTATTGAGGAAAATAGAAGAGCTTAAAACTCCAGCAGCTGCTGCTTCTACTGCTTAGACAGTCAGCTTGGAGGATGTGTGTTCTTCTTATCCTCGGTATGGTGTAACAAGGATGATTCCGGCTTCGATTTTGATCTACTTGTGGATTTCATAACATTTTGTCTAAGATGTTCACTGTTTTTGTTCTCCTTACAGAAATTGGATTATGTGCGCAACTCTCAAATATGATTATGGTGCTAGTTGTATAGAAGCTGCTGGATTCAATGTGGAATAAATGGGTTATGAATTTGTTGGACTCTGGAGTTGCATGATTTTCAAATTTAATCACCAGCCTACTGTAAGAACTTGACTCGATGTAAGAACTTCAAGAACTTGACTCACGGTTAGAACTTGACTCTCTGCTGTTGGATGATGAAATTCCGCTAATTTAGTGAATGATCATGGGTTTATAATCAGAGGATACTTTCTTCATTGGTACGAGACCTTTGTAAAAACCCAAAGTAAAATCAGGAGAGTTTATGCTCAAAATGTACAATATCATACATGGAGAAAGTGGACAATATCATACCATTGGGGAGAGTCGTATTCATCTAACATAGTATTAGAGTCATGTCCTAAAACTTAGTTGTGTCACTAAATTGGTAAATCTTCAAATGTGTTCCCAAAAGAAAAGGAGTCAAGCCTCCTTCCGTAAAGGCACAATAAAAACAAAGCTATAAGCACGGTCTGTATTCATCTAACCTTCAAACAAA

mRNA sequence

ATGTTTCTTAGAACAATTTTTGGTGTTCTCCGATTTCTGTGTAAGCCAATGGCTCAAGAAGGAAATGTGATTGCCTGTCGTAGTACTTCTGAATGGAATGCTGTATTGTTGAAAGAATCTGGAAAACTGATTGTGGTGCATTTTACTGCTCCCTGGTGCGGGCCACGCCGTTTAATTGCTCCATATTTCTCACAATTGGCTAAGAATCATCCTAGTGTCATTTTCCTGGAAGTAGACGTCGATGAATTGAAACGTGTTGCTTTCAAGTGGGATATTGAGGCATTACCGACGTTTATTTTCCTGAAAAGAGGGCAAAAATCTCACAGGATTGTTGGTACTGATAGAGCGGCGCTATTGAGGAAAATAGAAGAGCTTAAAACTCCAGCAGCTGCTGCTTCTACTGCTTAGACAGTCAGCTTGGAGGATGTGTGTTCTTCTTATCCTCGAAATTGGATTATGTGCGCAACTCTCAAATATGATTATGGTGCTAGTTGTATAGAAGCTGCTGGATTCAATGTGGAATAAATGGGTTATGAATTTGTTGGACTCTGGAGTTGCATGATTTTCAAATTTAATCACCAGCCTACTGTAAGAACTTGACTCGATGTAAGAACTTCAAGAACTTGACTCACGGTTAGAACTTGACTCTCTGCTGTTGGATGATGAAATTCCGCTAATTTAGTGAATGATCATGGGTTTATAATCAGAGGATACTTTCTTCATTGGTACGAGACCTTTGTAAAAACCCAAAGTAAAATCAGGAGAGTTTATGCTCAAAATGTACAATATCATACATGGAGAAAGTGGACAATATCATACCATTGGGGAGAGTCGTATTCATCTAACATAGTATTAGAGTCATGTCCTAAAACTTAGTTGTGTCACTAAATTGGTAAATCTTCAAATGTGTTCCCAAAAGAAAAGGAGTCAAGCCTCCTTCCGTAAAGGCACAATAAAAACAAAGCTATAAGCACGGTCTGTATTCATCTAACCTTCAAACAAA

Coding sequence (CDS)

ATGTTTCTTAGAACAATTTTTGGTGTTCTCCGATTTCTGTGTAAGCCAATGGCTCAAGAAGGAAATGTGATTGCCTGTCGTAGTACTTCTGAATGGAATGCTGTATTGTTGAAAGAATCTGGAAAACTGATTGTGGTGCATTTTACTGCTCCCTGGTGCGGGCCACGCCGTTTAATTGCTCCATATTTCTCACAATTGGCTAAGAATCATCCTAGTGTCATTTTCCTGGAAGTAGACGTCGATGAATTGAAACGTGTTGCTTTCAAGTGGGATATTGAGGCATTACCGACGTTTATTTTCCTGAAAAGAGGGCAAAAATCTCACAGGATTGTTGGTACTGATAGAGCGGCGCTATTGAGGAAAATAGAAGAGCTTAAAACTCCAGCAGCTGCTGCTTCTACTGCTTAG

Protein sequence

MFLRTIFGVLRFLCKPMAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA

Homology

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BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot
Match: Q96419 (Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.7e-27
Identity = 59/108 (54.63%), Postives = 75/108 (69.44%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVL--LKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA+E  VIAC +  EWN      K+SGKLIV+ FTA WCGP R+I PY S+LAK  P V 
Sbjct: 1   MAEEAQVIACHTVQEWNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVA 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKI 123
           F +VDVD+LK VA ++ +EA+P+F+ LK GQ+  RIVG  +  LL KI
Sbjct: 61  FFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKI 108

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot
Match: P29449 (Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 18  AQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIF 77
           ++EG V  C    EWN    K  E+ KL+VV FTA WCGP R IAP  + +AK  P VIF
Sbjct: 9   SEEGQVFGCHKVEEWNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIF 68

Query: 78  LEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAAS 134
           L+VDVDELK V+ +W +EA+PTF+F+K G++  R+VG  +  L + I +   PA   +
Sbjct: 69  LKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTIVKHAAPATVTA 126

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot
Match: O65049 (Thioredoxin H-type OS=Picea mariana OX=3335 GN=SB09 PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-25
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 0


Query: 20  EGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFLE 79
           EGNV AC ST  W + L +  ++ +L+ V FTA WCGP R+I P F +L+K  P + FL+
Sbjct: 3   EGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLK 62

Query: 80  VDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAAST 135
           VDVDEL+ VA +WD+EA+PTFIF+K G+   ++VG  +  L RK+  L   AAAA+T
Sbjct: 63  VDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAAL---AAAATT 116

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot
Match: P29448 (Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-25
Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 18  AQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIF 77
           ++EG VIAC +   WN  L K  ES  L+VV FTA WCGP R IAP+F+ LAK  P+V+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 78  LEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAAL 119
           L+VD DELK VA  W I+A+PTF+FLK G+   ++VG  +  L
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDEL 105

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot
Match: Q42403 (Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 2.7e-25
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVL--LKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA EG VIAC +  +W   L    ES KLIV+ FTA WC P R IAP F+ LAK H  V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAA 133
           F +VDVDEL  VA ++ ++A+PTFIF+K G+    +VG  +  ++  +E+ KT  AAA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Cp4.1LG11g02330 vs. NCBI nr
Match: XP_022997534.1 (thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 250 bits (638), Expect = 6.53e-83
Identity = 124/132 (93.94%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   RTIFGVLRFLCKPMAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYF 63
           RTIF  LRFLCKP+AQEGNVIACRSTSEWNAVLLKESGKLIVVHFTA WCGPRRLIAPYF
Sbjct: 29  RTIFAGLRFLCKPLAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTASWCGPRRLIAPYF 88

Query: 64  SQLAKNHPSVIFLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIE 123
            QLAKNHPSVIFLEVDVDELK VAFKWDIEAL TFIFLKRGQKSHRIVGTDRAALLRKIE
Sbjct: 89  LQLAKNHPSVIFLEVDVDELKHVAFKWDIEALLTFIFLKRGQKSHRIVGTDRAALLRKIE 148

Query: 124 ELKTPAAAASTA 135
           ELKTPA AASTA
Sbjct: 149 ELKTPAVAASTA 160

[Close]

BLAST of Cp4.1LG11g02330 vs. NCBI nr
Match: XP_023547172.1 (thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241 bits (615), Expect = 5.32e-80
Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 76
           MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL
Sbjct: 1   MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 60

Query: 77  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 135
           EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA
Sbjct: 61  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 119

[Close]

BLAST of Cp4.1LG11g02330 vs. NCBI nr
Match: KAG7029408.1 (hypothetical protein SDJN02_07747, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238 bits (607), Expect = 8.84e-79
Identity = 118/119 (99.16%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 76
           MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTA WCGPRRLIAPYFSQLAKNHPSVIFL
Sbjct: 1   MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTASWCGPRRLIAPYFSQLAKNHPSVIFL 60

Query: 77  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 135
           EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA
Sbjct: 61  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 119

[Close]

BLAST of Cp4.1LG11g02330 vs. NCBI nr
Match: KAG6598471.1 (hypothetical protein SDJN03_08249, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 237 bits (604), Expect = 2.54e-78
Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 76
           MAQEGNVIACRSTSEWNAVLL+ESGKLIVVHFTA WCGPRRLIAPYFSQLAKNHPSVIFL
Sbjct: 1   MAQEGNVIACRSTSEWNAVLLRESGKLIVVHFTASWCGPRRLIAPYFSQLAKNHPSVIFL 60

Query: 77  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 135
           EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA
Sbjct: 61  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 119

[Close]

BLAST of Cp4.1LG11g02330 vs. NCBI nr
Match: XP_022962291.1 (thioredoxin H-type-like [Cucurbita moschata])

HSP 1 Score: 234 bits (597), Expect = 2.96e-77
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 76
           MAQEGNVIACRSTSEWNAVLL+ESGKLIVVHFTA WCGPRRLIAPY SQLAKNHPSVIFL
Sbjct: 1   MAQEGNVIACRSTSEWNAVLLRESGKLIVVHFTASWCGPRRLIAPYVSQLAKNHPSVIFL 60

Query: 77  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 135
           EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA
Sbjct: 61  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 119

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL
Match: A0A6J1KBN3 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111492426 PE=4 SV=1)

HSP 1 Score: 250 bits (638), Expect = 3.16e-83
Identity = 124/132 (93.94%), Postives = 125/132 (94.70%), Query Frame = 0


Query: 4   RTIFGVLRFLCKPMAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYF 63
           RTIF  LRFLCKP+AQEGNVIACRSTSEWNAVLLKESGKLIVVHFTA WCGPRRLIAPYF
Sbjct: 29  RTIFAGLRFLCKPLAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTASWCGPRRLIAPYF 88

Query: 64  SQLAKNHPSVIFLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIE 123
            QLAKNHPSVIFLEVDVDELK VAFKWDIEAL TFIFLKRGQKSHRIVGTDRAALLRKIE
Sbjct: 89  LQLAKNHPSVIFLEVDVDELKHVAFKWDIEALLTFIFLKRGQKSHRIVGTDRAALLRKIE 148

Query: 124 ELKTPAAAASTA 135
           ELKTPA AASTA
Sbjct: 149 ELKTPAVAASTA 160

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL
Match: A0A6J1HCP9 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111462787 PE=4 SV=1)

HSP 1 Score: 234 bits (597), Expect = 1.43e-77
Identity = 116/119 (97.48%), Postives = 117/119 (98.32%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFL 76
           MAQEGNVIACRSTSEWNAVLL+ESGKLIVVHFTA WCGPRRLIAPY SQLAKNHPSVIFL
Sbjct: 1   MAQEGNVIACRSTSEWNAVLLRESGKLIVVHFTASWCGPRRLIAPYVSQLAKNHPSVIFL 60

Query: 77  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 135
           EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA
Sbjct: 61  EVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAASTA 119

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL
Match: A0A6J1KLL7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 6.36e-52
Identity = 80/120 (66.67%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA+EG VIAC   +EW+A L K  ESGKLIVV FTA WCGP R IAPYFS+LAKNHP V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAAST 134
           FL+VDVDEL  VA +W+I A+PTF+F+KRG+  H+IVG D++ALL+KIEELKTP AA ++
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL
Match: A0A6J1GHE8 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1)

HSP 1 Score: 169 bits (429), Expect = 6.56e-52
Identity = 80/120 (66.67%), Postives = 98/120 (81.67%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA+EG VIAC   +EW+A L K  ESGKLIVV FTA WCGP R IAPYFS+LAKNHP V+
Sbjct: 1   MAEEGQVIACHKKAEWDAHLAKAKESGKLIVVDFTASWCGPCRTIAPYFSELAKNHPGVV 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAAST 134
           FL+VDVDEL  VA +W+I A+PTF+F+KRG+  H+IVG D++ALL+KIEELKTP AA ++
Sbjct: 61  FLKVDVDELNTVATEWEINAMPTFVFMKRGETVHKIVGADKSALLKKIEELKTPTAATTS 120

[Close]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL
Match: A0A1S3BB48 (thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1)

HSP 1 Score: 166 bits (419), Expect = 2.12e-50
Identity = 79/120 (65.83%), Postives = 96/120 (80.00%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           M +EG VIAC   SEW+A+L K  ESGKL+VV FTA WCGP R IAPYFS+LAKNHP V+
Sbjct: 1   MGEEGQVIACHKQSEWDALLAKAKESGKLVVVDFTASWCGPCRTIAPYFSELAKNHPGVM 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAAST 134
           FL+VDVDEL  +A +W I A+PTF+F+K G+  H+IVG DRAALL+KIEELKT  AAA++
Sbjct: 61  FLKVDVDELNAIASEWKINAMPTFVFVKGGETLHKIVGADRAALLKKIEELKTSTAAATS 120

[Close]

BLAST of Cp4.1LG11g02330 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 55/103 (53.40%), Postives = 71/103 (68.93%), Query Frame = 0


Query: 18  AQEGNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIF 77
           ++EG VIAC +   WN  L K  ES  L+VV FTA WCGP R IAP+F+ LAK  P+V+F
Sbjct: 3   SEEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLF 62

Query: 78  LEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAAL 119
           L+VD DELK VA  W I+A+PTF+FLK G+   ++VG  +  L
Sbjct: 63  LKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDEL 105

[Close]

BLAST of Cp4.1LG11g02330 vs. TAIR 10
Match: AT5G42980.1 (thioredoxin 3 )

HSP 1 Score: 116.3 bits (290), Expect = 1.9e-26
Identity = 57/118 (48.31%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVL--LKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA EG VIAC +  +W   L    ES KLIV+ FTA WC P R IAP F+ LAK H  V+
Sbjct: 1   MAAEGEVIACHTVEDWTEKLKAANESKKLIVIDFTATWCPPCRFIAPVFADLAKKHLDVV 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEELKTPAAAA 133
           F +VDVDEL  VA ++ ++A+PTFIF+K G+    +VG  +  ++  +E+ KT  AAA
Sbjct: 61  FFKVDVDELNTVAEEFKVQAMPTFIFMKEGEIKETVVGAAKEEIIANLEKHKTVVAAA 118

[Close]

BLAST of Cp4.1LG11g02330 vs. TAIR 10
Match: AT1G45145.1 (thioredoxin H-type 5 )

HSP 1 Score: 106.7 bits (265), Expect = 1.5e-23
Identity = 50/108 (46.30%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 17  MAQEGNVIACRSTSEWNAVL--LKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVI 76
           MA EG VIAC +   WN  +    ES KLIV+ FTA WC P R IAP F+++AK   +V+
Sbjct: 1   MAGEGEVIACHTLEVWNEKVKDANESKKLIVIDFTASWCPPCRFIAPVFAEMAKKFTNVV 60

Query: 77  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKI 123
           F ++DVDEL+ VA ++ +EA+PTF+F+K G    R+VG  +  +  K+
Sbjct: 61  FFKIDVDELQAVAQEFKVEAMPTFVFMKEGNIIDRVVGAAKDEINEKL 108

[Close]

BLAST of Cp4.1LG11g02330 vs. TAIR 10
Match: AT1G19730.1 (Thioredoxin superfamily protein )

HSP 1 Score: 105.5 bits (262), Expect = 3.3e-23
Identity = 53/108 (49.07%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 18  AQEGNVIACRSTSEWNAVL--LKESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNH-PSVI 77
           A+EG VI C +   W   L   KES KLIV+ FTA WC P R+IAP F+ LAK    S I
Sbjct: 3   AEEGQVIGCHTNDVWTVQLDKAKESNKLIVIDFTASWCPPCRMIAPIFNDLAKKFMSSAI 62

Query: 78  FLEVDVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKI 123
           F +VDVDEL+ VA ++ +EA+PTF+F+K G+   ++VG ++  L  KI
Sbjct: 63  FFKVDVDELQSVAKEFGVEAMPTFVFIKAGEVVDKLVGANKEDLQAKI 110

[Close]

BLAST of Cp4.1LG11g02330 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 101.3 bits (251), Expect = 6.3e-22
Identity = 44/107 (41.12%), Postives = 70/107 (65.42%), Query Frame = 0


Query: 21  GNVIACRSTSEWNAVLLK--ESGKLIVVHFTAPWCGPRRLIAPYFSQLAKNHPSVIFLEV 80
           GNV    +   W+  L +    GK++V +F+A WCGP +++AP+F +L++ H S++FL V
Sbjct: 23  GNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLV 82

Query: 81  DVDELKRVAFKWDIEALPTFIFLKRGQKSHRIVGTDRAALLRKIEEL 126
           DVDEL   +  WDI+A PTF FLK GQ+  ++VG ++  L +K+  +
Sbjct: 83  DVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSI 129

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g02330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96419	1.7e-27	54.63	Thioredoxin H-type OS=Fagopyrum esculentum OX=3617 PE=3 SV=1	[more]
P29449	1.2e-25	46.61	Thioredoxin H-type 1 OS=Nicotiana tabacum OX=4097 PE=2 SV=1	[more]
O65049	1.2e-25	49.57	Thioredoxin H-type OS=Picea mariana OX=3335 GN=SB09 PE=2 SV=1	[more]
P29448	2.7e-25	53.40	Thioredoxin H1 OS=Arabidopsis thaliana OX=3702 GN=TRX1 PE=1 SV=1	[more]
Q42403	2.7e-25	48.31	Thioredoxin H3 OS=Arabidopsis thaliana OX=3702 GN=TRX3 PE=1 SV=1	[more]

BLAST of Cp4.1LG11g02330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997534.1	6.53e-83	93.94	thioredoxin H-type-like [Cucurbita maxima]	[more]
XP_023547172.1	5.32e-80	100.00	thioredoxin H-type-like [Cucurbita pepo subsp. pepo]	[more]
KAG7029408.1	8.84e-79	99.16	hypothetical protein SDJN02_07747, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6598471.1	2.54e-78	98.32	hypothetical protein SDJN03_08249, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022962291.1	2.96e-77	97.48	thioredoxin H-type-like [Cucurbita moschata]	[more]

BLAST of Cp4.1LG11g02330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KBN3	3.16e-83	93.94	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111492426 PE=4 SV=1	[more]
A0A6J1HCP9	1.43e-77	97.48	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111462787 PE=4 SV=1	[more]
A0A6J1KLL7	6.36e-52	66.67	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111496363 PE=4 SV=1	[more]
A0A6J1GHE8	6.56e-52	66.67	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111454193 PE=4 SV=1	[more]
A0A1S3BB48	2.12e-50	65.83	thioredoxin H1-like OS=Cucumis melo OX=3656 GN=LOC103488007 PE=4 SV=1	[more]

BLAST of Cp4.1LG11g02330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G51030.1	1.9e-26	53.40	thioredoxin H-type 1	[more]
AT5G42980.1	1.9e-26	48.31	thioredoxin 3	[more]
AT1G45145.1	1.5e-23	46.30	thioredoxin H-type 5	[more]
AT1G19730.1	3.3e-23	49.07	Thioredoxin superfamily protein	[more]
AT3G08710.1	6.3e-22	41.12	thioredoxin H-type 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 44..52 score: 51.91 coord: 91..102 score: 32.59 coord: 52..61 score: 55.22
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 14..131 e-value: 9.6E-32 score: 111.4
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 17..125
None	No IPR available	PANTHER	PTHR10438:SF431	THIOREDOXIN	coord: 17..125
None	No IPR available	CDD	cd02947	TRX_family	coord: 30..121 e-value: 8.78391E-30 score: 101.481
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 27..122 e-value: 4.9E-22 score: 77.9
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 3..127 score: 12.256941
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 18..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g02330.1	Cp4.1LG11g02330.1	mRNA