Cp4.1LG11g02140 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g02140
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionProteasome subunit alpha type
LocationCp4.1LG11: 1144833 .. 1148775 (-)
RNA-Seq ExpressionCp4.1LG11g02140
SyntenyCp4.1LG11g02140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACGAGTAAAGTCACCACAGTACAAAGTGAGGAAACCCATCGCCAAATATTGCCTTGGAGAAGAGGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTGTGCACACCAGGGATCGTGATTGTGGCTCTGCGAAACTCTTGAATTGTTTTTATTTTTGTTTCAGCAACAATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGCTACACTTATGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTTTGTAAACGAAGCCCTCGTTCTGTTCACAATTTGTTGGTGCTTTTAGTTTCTTATGTATTTCTTGAATTTTAGCTATCTATGCTGTGGGTTTGAATTTATTTGGCTAGTGGCGGGCTTGGTTCTGAAATTACGCATTACCATAGCTGGATATTTAAAGGTGAAACTTTTCAGATTATTAAGTTCTCTAAGCTGAGGGAATAGAATGTGAATCTTTTATTAGCCAGAAACTGAAGTTAATGAACATTTTGGAAATGGCAGAAGGTTGCCTATGTATCCTCTAATTTTCAGCACTTTGAGTGTTTAAAGGCAGCTAAAGATTATGGGCTTTCTGCTTGCTTATCTTATGCTGTTAGTATTCGTTCCACTGATTCTTAACCCTGCAGTAGAAGAAACAAACTAGGACTTCGAGCTCTCCAATTTGTTTGATTTTTCTAATTGTTGAATTAGTTTGAACCCACATAGCCTTGCTGGTAATTTGTTCTTTCTATTTTTTGTAGTTTGTTGTTCAATAGTTTAGACTTTAGTAGAAGCCAGGAAGGTGAGTAATTTAGGGTCACAATGTATCTACCACTTTTTATGACCATTAGATGTATGAAAAATTAGATTCGTTTAACTATGTAGCTATCTGGTGGTCATGGGGGATGGCATAGCTCCCAATAATTTATTCTGGAATGGTTTTCTAGGAACGTTTTCTTTCATGTTTCTGAATAAAAGCTTGGGTTCTTACCATAAAAAAAGAAAAAAAGAAAAAAAGTGGAGTGTTGAATTCCTGGAATTGGGTTTAATTTATTAGTATGTAACAGGGCACTGAGAGATAGCATGAGGACGTGCCATTCTCTACTAAGTTCTTTAATTCCGTTTCAATGTGGTTGTTGTGTTGGTGTTGGTGTTAGTGTTGGTGTTGATTTAAATAGATCCTTTGTTGGGTTAGATTTTGCTTTCAAGTTCTTTGGTTTGCCTAATCATTTTGATATCTCAATTCCTTTTTACTGCCCTTCTCCTAGCTTTGCTTGAAATTTGGGGAATAAAATGTTGGTACTCGGAATGCATGTAGTAGTGTAGATGAAGAAACAATCTTGGTAACCTGGCTTATTGCATTTATCCCACTTTTTGATTTTTTTTGTTAGAGATCTTGTATTCACAACAAAAATAAAGACAAAAAAACCTGGACTCCAGAGTTAGAGAAAATGGCATCCACTGCCAACTAGCTAATACAAGACCTTACAAACTAGGGTGATCTGAAATACTATGTGGTTATGTTATAGAACAAAATTTTCTGGGAAGGGCACTCTAATGAGAGACTGCATGAAGAACAAAATCGATATAGTTATGTAAGCATTTCTAACCAAACGCGTCGTGAAAGATGATCTGGTTTCTTTCTAACCAAATGAGCCATAGAAAAGCTCTAATGGCAAACTTCCAAACGTCTCTATCTTTTCATTTCAGCCACCAGCTTGAACGAGCTTTGAGGAGCTTATCTTCATGCATTTTATCCCCTCTTTAACCTCTACTTTTTTTTCCGCTGTAAAATAGGTTTACGTCAACCGATATGGGTAAAAGGGGAGTGGACTGCTATTTTGTTGTACGTGTACCCTTTTGTTTCTCCATAAATCATGGTAAATTCCTTCCCACGAGAATATATTCAAGTGTGTAGGACGTCCCTTATGGCTTTGCACCAGATGTAGTTGTTAATTGTTATCAATCTTTTGCTGGTTCTTCCTGCCTCCTCGAATCATTTAGATGTCTGTCCCCAGGCCGTTGGTAGGATCCAGCCCAAGCTCAAAAATCATGCCAGTATAGTGGTTTTGTATGGTTTCCTTTATTAGAAAGTTATCATCTTCCGTAAGATGGGAAAAAGCTCTAGAGGCAGGAAATATGCCAAAACAGGAATAGCATTGGATACTTTATTGAGGGTGTATTCTCTCTGAACTGTTCTGTTATATGTATGTCCAGGGCTCCAAGCATGGCTATTTTTACAGGGAACACCAGTTCTCATGTCCAGAAACTTAGGTTTCTCTAATTATCTTGCACATTTGTTGCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGCAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTCCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAAGGGCACACACCGTGCAGACGTTGCCTCTCCCTTCCCCACTTCCTGGGTATTGCTGTTAGGTTTGGATCTTTAGTGCAGACATTTCGACACTTCTCTATTGTGGCCTCAGATTTCGGTTTTACATTTATGAAAGTTGTATCAGACCGTTGAAAATGCGGTATCACAACTGATTATGTTTTTCCATTATATTATTGTGAAAAGAACATTAAGCTGATCCACAATGGTCCTTAGACACCTGGAATCAAGTTAGTTAATATTGAATTGTATGAAGGGGAAAATCTTCAGAAAGAAGATGAATGGATTCTTTCCATATGTGAAGAGGATAGATGACAGATCTTGATGCATTGCAAAGTTCGCTCGAAGTTTTATGGATCCGAGCCAAAGACGCTTCGACGTTAGGACTTCTTATATTAAAGGTCTCTTTTTAAACATGCATGCATATACACACTAGAGACCACAGAGTAGCTTGAAAGTAGATGAAATCACATTAATGAAGAACAACTTTTTACATCTTGTTTATGGAGAGACATAAAGCCTAAGATTATCAAACAGGTCCTCCAGCTAACTTCAAATAACTTGAAAGAGATGCCTGTTAAAGAGAGAAAATTGATGGAGGCAACAATGGTATGAGAGAAATGATTGATCATTGAGGGATCTCAGGGAGAGGAAGCCCTTTGATCTGCAAATGCTTGTGCATCCATTGCCTGTTTTCTGGGGTAACCTCACCCCCAAGGGCACGGATGACAGAACCGCCGCTGCACGATCCCAATTGACAGCATTTCACAAGAGATAATCCCTTCACTAATCCGTATAGAAACCCGCTCGCAAACAAGTCGCCTGCTCCGGTCGCATCGGTCGCCTTTGACTAC

mRNA sequence

AAACGAGTAAAGTCACCACAGTACAAAGTGAGGAAACCCATCGCCAAATATTGCCTTGGAGAAGAGGAAAACCCCTAAATCCTCCATTAATACGACCTCAATCCTCTCCCTTTGTGCACACCAGGGATCGTGATTGTGGCTCTGCGAAACTCTTGAATTGTTTTTATTTTTGTTTCAGCAACAATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGCTACACTTATGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGCAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTCCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAAGGGCACACACCGTGCAGACGTTGCCTCTCCCTTCCCCACTTCCTGGGTATTGCTGTTAGGTTTGGATCTTTAGTGCAGACATTTCGACACTTCTCTATTGTGGCCTCAGATTTCGGTTTTACATTTATGAAAGTTGTATCAGACCGTTGAAAATGCGGTATCACAACTGATTATGTTTTTCCATTATATTATTGTGAAAAGAACATTAAGCTGATCCACAATGGTCCTTAGACACCTGGAATCAAGTTAGTTAATATTGAATTGTATGAAGGGGAAAATCTTCAGAAAGAAGATGAATGGATTCTTTCCATATGTGAAGAGGATAGATGACAGATCTTGATGCATTGCAAAGTTCGCTCGAAGTTTTATGGATCCGAGCCAAAGACGCTTCGACGTTAGGACTTCTTATATTAAAGGTCTCTTTTTAAACATGCATGCATATACACACTAGAGACCACAGAGTAGCTTGAAAGTAGATGAAATCACATTAATGAAGAACAACTTTTTACATCTTGTTTATGGAGAGACATAAAGCCTAAGATTATCAAACAGGTCCTCCAGCTAACTTCAAATAACTTGAAAGAGATGCCTGTTAAAGAGAGAAAATTGATGGAGGCAACAATGGTATGAGAGAAATGATTGATCATTGAGGGATCTCAGGGAGAGGAAGCCCTTTGATCTGCAAATGCTTGTGCATCCATTGCCTGTTTTCTGGGGTAACCTCACCCCCAAGGGCACGGATGACAGAACCGCCGCTGCACGATCCCAATTGACAGCATTTCACAAGAGATAATCCCTTCACTAATCCGTATAGAAACCCGCTCGCAAACAAGTCGCCTGCTCCGGTCGCATCGGTCGCCTTTGACTAC

Coding sequence (CDS)

ATGTTTAGGAATCAGTACGATACGGACGTGACGACATGGAGTCCGGCGGGGAGGTTGTTTCAGGTGGAGTACGCGATGGAGGCCGTGAAGCAAGGCTCCGCTGCCATTGGCCTCCGATCCAAGACCCATGTGGTTCTTGCCTGCGTCAATAAGGCTAACTCTGAACTATCCTCGCACCAGAAGAAGATCTTCAAAGTCGACGATCACATCGGCGTCGCCATTTCCGGCCTTACTGCTGATGGACGCGTTCTTTCCCGTTATATGAGATCTGAGTGTATCAATTACAGCTACACTTATGAATCTCCGCTTCCCGTTGGTCGTCTCGTAGTTCAACTTGCCGATAAGGCTCAGGTCTGCACCCAACGCTCATGGAAACGTCCATACGGTGTTGGTCTGCTGGTAGGTGGTCTGGATGAGTCTGGCGCTCATCTCTACTACAACTGCCCGAGCGGGAATTACTTTGAATATCAAGCTTTTGCCATAGGATCCCGTTCACAGGCTGCAAAGACATACTTGGAAAGGAGGTTTGAGAACTTCAAGGACTCTTCTAGAGACGACTTAATCAAAGATGCACTGATGGCTACCAGAGAAACCTTGCAAGGAGAAAAACTGACTTCCTCCATATGCACGATTTCCATTTTGGGAGTTGGTGAACCTTTCCATATACTGGATAGGGAAACTGTTCAGCAGTTGATTGATGAATTTGAGATTGTTAAGGAGGATGATGTCCCTGCTGCGGATCAGGATGTCGCCCCGGAGCAGGGTGATTCTGCTGCCCCCGAACCAGCTGCAGGGACAGACCAAGGTAGTGCCCCAGATCAAGGCGTGGCGCCAATGGATATCTAA

Protein sequence

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKEDDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Homology
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BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match: O23712 (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 SV=2)

HSP 1 Score: 446.8 bits (1148), Expect = 1.8e-124
Identity = 223/281 (79.36%), Postives = 251/281 (89.32%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           +SS++DLIKDA+MA RETLQGE L SS+CT+S+LGV EPFH LD+E++Q++ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 282
           ++  A + +  PE    AAP  A   +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPE----AAPGAAGTGEQGGSGDQDVAPMEI 277

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match: P34066 (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 SV=3)

HSP 1 Score: 437.2 bits (1123), Expect = 1.4e-121
Identity = 221/281 (78.65%), Postives = 244/281 (86.83%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CT++ILGV EPFH LD+E +Q++ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 282
           ++    +      +   AAP    G   G A DQ VAPM++
Sbjct: 241 EEEGEGEAGEGEAEAAEAAPAERGG---GVAGDQDVAPMEM 278

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match: P52428 (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 3.5e-104
Identity = 194/286 (67.83%), Postives = 227/286 (79.37%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSA +GLRS+TH VLA  NKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +K+F+V DH GVA++GLTADGRVLSR++RSECIN+++ Y++PLPV RL ++LADKAQVCT
Sbjct: 61  RKVFRVADHAGVALAGLTADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLV GLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKT+LERRFE + 
Sbjct: 121 QRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYN 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISIL-----GVGEPFHILDRETVQQLIDEF 240
           D + + LIKDAL A +ETLQGEKLTSS CT++I+     G  EPF ++D + +Q++ID  
Sbjct: 181 DYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQEIIDSM 240

Query: 241 EIVKEDDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 282
           E        AA++  A E   S+  E   GTD         APMDI
Sbjct: 241 E--------AAEEAPAAEAESSSMQEEDKGTD--------AAPMDI 270

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match: Q27562 (Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.2e-73
Identity = 132/238 (55.46%), Postives = 179/238 (75.21%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           M+RNQYD+D+TT+SP+GR+ Q+EYAMEAVKQG AA+ L+SK   VL  + +++SEL S+Q
Sbjct: 1   MYRNQYDSDITTFSPSGRIHQIEYAMEAVKQGGAAVALKSKQFAVLVSLKRSSSELGSYQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIF VDDH+G+AISGLTAD R+L  YMR+EC NY+Y YES + V RLV ++ADK QV T
Sbjct: 61  KKIFVVDDHVGIAISGLTADARMLCNYMRNECSNYNYVYESQMRVERLVTKVADKHQVHT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QR  +RPYGVGLLV G D+ GAH+Y  CPSGN+++Y++ +IGSRSQ+AKTYLE+ FE+F+
Sbjct: 121 QRYGRRPYGVGLLVAGYDQLGAHIYQTCPSGNFYDYKSISIGSRSQSAKTYLEKHFESFE 180

Query: 181 DSSRDDLIKDALMATRETLQG--EKLTSSICTISILGVGEPFHILDRETVQQLIDEFE 237
           + + + LI   L A RET+    + L S   +I I+G G+PF I++    Q  ++  E
Sbjct: 181 ECTLEQLITHGLRALRETIPNTDDTLNSKNVSIGIVGEGQPFKIIEEADAQPYLNLLE 238

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match: Q9R1P4 (Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 4.8e-69
Identity = 133/269 (49.44%), Postives = 178/269 (66.17%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYD DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL  + +A SEL++HQ
Sbjct: 1   MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKI  VD+HIG++I+GLTAD R+L  +MR EC++  + ++ PLPV RLV  +  K Q+ T
Sbjct: 61  KKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QR  +RPYGVGLL+ G D+ G H++  CPS NYF+ +A +IG+RSQ+A+TYLER    F 
Sbjct: 121 QRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFM 180

Query: 181 DSSRDDLIKDALMATRETLQGEK-LTSSICTISILGVGEPFHILDRETVQQLIDEFEIVK 240
           + + D+L+K  L A RETL  E+ LT+   +I I+G    F I D + V   +D  E   
Sbjct: 181 ECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDLEFTIYDDDDVSPFLDGLE--- 240

Query: 241 EDDVPAADQDVAPEQGDSAAPEPAAGTDQ 269
                  ++     Q   AA EPA   D+
Sbjct: 241 -------ERPQRKAQPSQAAEEPAEKADE 259

[Close]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match: XP_023546840.1 (proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1434), Expect = 8.36e-200
Identity = 281/281 (100.00%), Postives = 281/281 (100.00%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match: XP_022961863.1 (proteasome subunit alpha type-1-B-like [Cucurbita moschata])

HSP 1 Score: 550 bits (1418), Expect = 2.38e-197
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAA-GTDQGSAPDQGVAPMDI 281
           DDVPAADQDVAPEQGDSAAPEPAA GTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match: XP_022996683.1 (proteasome subunit alpha type-1-B-like [Cucurbita maxima])

HSP 1 Score: 550 bits (1417), Expect = 3.26e-197
Identity = 276/281 (98.22%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLY+NCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYFNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSS+DDLIKDALMATRETLQGEKLTSS+CTISILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSKDDLIKDALMATRETLQGEKLTSSVCTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQDVAPE GDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEHGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match: XP_008444739.1 (PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 proteasome subunit alpha type-1-B-like [Cucumis melo var. makuwa])

HSP 1 Score: 548 bits (1413), Expect = 1.33e-196
Identity = 275/281 (97.86%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQD+APEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match: XP_004152689.1 (proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical protein Csa_022520 [Cucumis sativus])

HSP 1 Score: 547 bits (1409), Expect = 5.41e-196
Identity = 274/281 (97.51%), Postives = 279/281 (99.29%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPA DQD+APEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match: A0A6J1HD20 (Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3 SV=1)

HSP 1 Score: 550 bits (1418), Expect = 1.15e-197
Identity = 280/282 (99.29%), Postives = 281/282 (99.65%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAA-GTDQGSAPDQGVAPMDI 281
           DDVPAADQDVAPEQGDSAAPEPAA GTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEQGDSAAPEPAAAGTDQGSAPDQGVAPMDI 282

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match: A0A6J1KBQ0 (Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111491854 PE=3 SV=1)

HSP 1 Score: 550 bits (1417), Expect = 1.58e-197
Identity = 276/281 (98.22%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLY+NCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYFNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSS+DDLIKDALMATRETLQGEKLTSS+CTISILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSKDDLIKDALMATRETLQGEKLTSSVCTISILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQDVAPE GDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDVAPEHGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match: A0A5A7VC66 (Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005560 PE=3 SV=1)

HSP 1 Score: 548 bits (1413), Expect = 6.43e-197
Identity = 275/281 (97.86%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQD+APEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match: A0A1S3BBW8 (Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1)

HSP 1 Score: 548 bits (1413), Expect = 6.43e-197
Identity = 275/281 (97.86%), Postives = 280/281 (99.64%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPAADQD+APEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAADQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match: A0A0A0LLH5 (Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV=1)

HSP 1 Score: 547 bits (1409), Expect = 2.62e-196
Identity = 274/281 (97.51%), Postives = 279/281 (99.29%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRS THVVLACVNKANSELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSNTHVVLACVNKANSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT
Sbjct: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSRD+LIKDAL+ATRETLQGEKLTSSICTI+ILGVGEPFHILDRETVQ+LIDEFEIVKE
Sbjct: 181 DSSRDELIKDALIATRETLQGEKLTSSICTIAILGVGEPFHILDRETVQKLIDEFEIVKE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281
           DDVPA DQD+APEQGDSAAPEPAAGTDQGSAPDQGVAPMDI
Sbjct: 241 DDVPAVDQDIAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 281

[Close]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match: AT1G47250.1 (20S proteasome alpha subunit F2 )

HSP 1 Score: 446.8 bits (1148), Expect = 1.3e-125
Identity = 223/281 (79.36%), Postives = 251/281 (89.32%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLER+FE+F+
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQ 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           +SS++DLIKDA+MA RETLQGE L SS+CT+S+LGV EPFH LD+E++Q++ID FE V E
Sbjct: 181 ESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEPFHFLDQESIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 282
           ++  A + +  PE    AAP  A   +QG + DQ VAPM+I
Sbjct: 241 EEEDAGEGEAEPE----AAPGAAGTGEQGGSGDQDVAPMEI 277

[Close]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match: AT5G42790.1 (proteasome alpha subunit F1 )

HSP 1 Score: 437.2 bits (1123), Expect = 1.0e-122
Identity = 221/281 (78.65%), Postives = 244/281 (86.83%), Query Frame = 0 

Query: 1   MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQ 60
           MFRNQYDTDVTTWSP GRLFQVEYAMEAVKQGSAAIGLRS++HVVLACVNKA SELSSHQ
Sbjct: 1   MFRNQYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSELSSHQ 60

Query: 61  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCT 120
           +KIFKVDDHIGVAI+GLTADGRVLSRYMRSE IN+S+TYESPLPVGRLVV LADKAQVCT
Sbjct: 61  RKIFKVDDHIGVAIAGLTADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCT 120

Query: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFK 180
           QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE+F 
Sbjct: 121 QRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFESFG 180

Query: 181 DSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLIDEFEIVKE 240
           DSSR+DLIKDA++A RETLQGE L SS+CT++ILGV EPFH LD+E +Q++ID FE V E
Sbjct: 181 DSSREDLIKDAILAVRETLQGETLKSSLCTVAILGVDEPFHFLDQEAIQKVIDTFEKVPE 240

Query: 241 DDVPAADQDVAPEQGDSAAPEPAAGTDQGSAPDQGVAPMDI 282
           ++    +      +   AAP    G   G A DQ VAPM++
Sbjct: 241 EEEGEGEAGEGEAEAAEAAPAERGG---GVAGDQDVAPMEM 278

[Close]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match: AT1G53850.1 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0 

Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLI 233
             KD S  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match: AT1G53850.2 (20S proteasome alpha subunit E1 )

HSP 1 Score: 156.0 bits (393), Expect = 4.5e-38
Identity = 94/235 (40.00%), Postives = 136/235 (57.87%), Query Frame = 0 

Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLI 233
             KD S  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDLSLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

[Close]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match: AT3G14290.1 (20S proteasome alpha subunit E2 )

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 93/235 (39.57%), Postives = 136/235 (57.87%), Query Frame = 0 

Query: 3   RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSEL--SSHQ 62
           R +YD  V T+SP GRLFQVEYA+EA+K GS AIG+++K  VVLA   +  S L   S  
Sbjct: 5   RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSV 64

Query: 63  KKIFKVDDHIGVAISGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---Q 122
           +KI ++DDHIG A+SGL AD R L  + R E  N+ ++Y  P+ V      L D A    
Sbjct: 65  EKIMEIDDHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFG 124

Query: 123 VCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE 182
              + S  RP+GV LL+ G DE+G  LYY  PSG +++  A AIGS S+ A + L+ +F 
Sbjct: 125 EGEEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNAKAIGSGSEGADSSLQEQFN 184

Query: 183 NFKDSSRDDLIKDALMATRETLQGEKLTSSICTISILGVGEPFHILDRETVQQLI 233
             KD +  +    A+   ++ ++ EK+T +   + I  V   +H+   + V+ +I
Sbjct: 185 --KDITLQEAETIAVSILKQVME-EKVTPN--NVDIAKVAPAYHLYTPQEVEAVI 234

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g02140 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O237121.8e-12479.36Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana OX=3702 GN=PAF2 PE=1 S... [more]
P340661.4e-12178.65Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana OX=3702 GN=PAF1 PE=1 S... [more]
P524283.5e-10467.83Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAF1... [more]
Q275624.2e-7355.46Proteasome subunit alpha type-1 OS=Dictyostelium discoideum OX=44689 GN=psmA1 PE... [more]
Q9R1P44.8e-6949.44Proteasome subunit alpha type-1 OS=Mus musculus OX=10090 GN=Psma1 PE=1 SV=1[more]
BLAST of Cp4.1LG11g02140 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023546840.18.36e-200100.00proteasome subunit alpha type-1-B-like [Cucurbita pepo subsp. pepo][more]
XP_022961863.12.38e-19799.29proteasome subunit alpha type-1-B-like [Cucurbita moschata][more]
XP_022996683.13.26e-19798.22proteasome subunit alpha type-1-B-like [Cucurbita maxima][more]
XP_008444739.11.33e-19697.86PREDICTED: proteasome subunit alpha type-1-B-like [Cucumis melo] >KAA0065218.1 p... [more]
XP_004152689.15.41e-19697.51proteasome subunit alpha type-1-B [Cucumis sativus] >KGN62618.1 hypothetical pro... [more]
BLAST of Cp4.1LG11g02140 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HD201.15e-19799.29Proteasome subunit alpha type OS=Cucurbita moschata OX=3662 GN=LOC111462503 PE=3... [more]
A0A6J1KBQ01.58e-19798.22Proteasome subunit alpha type OS=Cucurbita maxima OX=3661 GN=LOC111491854 PE=3 S... [more]
A0A5A7VC666.43e-19797.86Proteasome subunit alpha type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A1S3BBW86.43e-19797.86Proteasome subunit alpha type OS=Cucumis melo OX=3656 GN=LOC103487987 PE=3 SV=1[more]
A0A0A0LLH52.62e-19697.51Proteasome subunit alpha type OS=Cucumis sativus OX=3659 GN=Csa_2G361820 PE=3 SV... [more]
BLAST of Cp4.1LG11g02140 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47250.11.3e-12579.3620S proteasome alpha subunit F2 [more]
AT5G42790.11.0e-12278.65proteasome alpha subunit F1 [more]
AT1G53850.14.5e-3840.0020S proteasome alpha subunit E1 [more]
AT1G53850.24.5e-3840.0020S proteasome alpha subunit E1 [more]
AT3G14290.11.0e-3739.5720S proteasome alpha subunit E2 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000426Proteasome alpha-subunit, N-terminal domainSMARTSM00948Proteasome_A_N_2coord: 6..28
e-value: 4.5E-10
score: 49.5
IPR000426Proteasome alpha-subunit, N-terminal domainPFAMPF10584Proteasome_A_Ncoord: 6..28
e-value: 6.8E-14
score: 51.2
IPR000426Proteasome alpha-subunit, N-terminal domainPROSITEPS00388PROTEASOME_ALPHA_1coord: 6..28
IPR001353Proteasome, subunit alpha/betaPFAMPF00227Proteasomecoord: 29..213
e-value: 9.9E-58
score: 194.8
IPR029055Nucleophile aminohydrolases, N-terminalGENE3D3.60.20.10Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1coord: 1..236
e-value: 2.8E-84
score: 284.1
IPR029055Nucleophile aminohydrolases, N-terminalSUPERFAMILY56235N-terminal nucleophile aminohydrolases (Ntn hydrolases)coord: 4..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..281
NoneNo IPR availablePANTHERPTHR11599:SF182PROTEASOME SUBUNIT ALPHA TYPEcoord: 1..272
NoneNo IPR availablePANTHERPTHR11599PROTEASOME SUBUNIT ALPHA/BETAcoord: 1..272
IPR023332Proteasome alpha-type subunitPROSITEPS51475PROTEASOME_ALPHA_2coord: 21..232
score: 76.329109
IPR035144Proteasome subunit alpha 1CDDcd03749proteasome_alpha_type_1coord: 6..215
e-value: 3.01481E-145
score: 404.365

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g02140.1Cp4.1LG11g02140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010498 proteasomal protein catabolic process
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0051603 proteolysis involved in cellular protein catabolic process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
cellular_component GO:0005839 proteasome core complex