Cp4.1LG11g01930 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g01930
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	B3 domain-containing protein At1g05920-like
Location	Cp4.1LG11: 1087381 .. 1087995 (-)
RNA-Seq Expression	Cp4.1LG11g01930
Synteny	Cp4.1LG11g01930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAAAGCGGCGTCGTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGAGATTGTGATGATGAGCCGAAGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACAGTGGAGATGCCGGCGGCGCTGCGAGAGAGGATTGAAGCAATGGGAGGCACCGACGTACAATTAGTGACGCAGAAGCAATTGCAAGAAAGTGATCGGAATAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTTATGAACGATTTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGAGGAGGATCGGAATGCAGGTGGCGATAATCGATTCGGCGTTGAGAGAGACCGTAATTGGCTTGAAATTGTGGAAGATTGGGAGCGGCCATAACTACTGCTTGGCGTCTCGATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGATCACACTCTCTGTTTCGCCCTCGTTAAGCTTGACATCTCTGAGGGGATCTTTAATTTTATTTGA

mRNA sequence

ATGGCTCAAAGCGGCGTCGTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGAGATTGTGATGATGAGCCGAAGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACAGTGGAGATGCCGGCGGCGCTGCGAGAGAGGATTGAAGCAATGGGAGGCACCGACGTACAATTAGTGACGCAGAAGCAATTGCAAGAAAGTGATCGGAATAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTTATGAACGATTTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGAGGAGGATCGGAATGCAGGTGGCGATAATCGATTCGGCGTTGAGAGAGACCGTAATTGGCTTGAAATTGTGGAAGATTGGGAGCGGCCATAACTACTGCTTGGCGTCTCGATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGATCACACTCTCTGTTTCGCCCTCGTTAAGCTTGACATCTCTGAGGGGATCTTTAATTTTATTTGA

Coding sequence (CDS)

ATGGCTCAAAGCGGCGTCGTTTCCAAGACTTTGGATCTGATCTCATCGTTCGGTCTTGATACGAACAAGAGGAAGAACAGAGATTGTGATGATGAGCCGAAGAGGAAGAGGCGAAGAGAGATGGTGTTTTCGAGTACAGTGGAGATGCCGGCGGCGCTGCGAGAGAGGATTGAAGCAATGGGAGGCACCGACGTACAATTAGTGACGCAGAAGCAATTGCAAGAAAGTGATCGGAATAAGAACCATGGCCGGTTGTTGATTCCGACGAAGAAGCTTATGAACGATTTCGCGACGGAGGAGGAGGCGGAGTTGATGATGCAAGAAGAGGTTGATCGGAGGAGGAGGAGGAGGATCGGAATGCAGGTGGCGATAATCGATTCGGCGTTGAGAGAGACCGTAATTGGCTTGAAATTGTGGAAGATTGGGAGCGGCCATAACTACTGCTTGGCGTCTCGATGGAATTCTTTCGCCGAACAAAACTCATTGGAAAGTGGCGATTACATCCAACTCTGGAGTTTCCGATCAAACAATAATGCTTTTATAGTTAACGATCACACTCTCTGTTTCGCCCTCGTTAAGCTTGACATCTCTGAGGGGATCTTTAATTTTATTTGA

Protein sequence

MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALVKLDISEGIFNFI

Homology

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot
Match: Q5RM09 (B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05920 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 54/176 (30.68%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 26  NRDCDDEPKRKRRR--EMVFSSTVEMPAALRERIEAMGGT-DVQLVTQKQLQESDRNKNH 85
           +R   + P+RK+    E V     + P  L + +  M G  D +L+ +K L  +D +   
Sbjct: 138 DRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQ 197

Query: 86  GRLLIPTKK-LMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKI 145
            RL IP    + NDF T +E+ L+ ++E+       +G+   ++D   ++  +G K W +
Sbjct: 198 NRLSIPINTVIQNDFLTLDESRLIDEDEI--TNEGNMGVAAFLVDQRTKKWNMGFKQWFM 257

Query: 146 ----GSGH-NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALV 193
               GS + ++ L   W++  E N L+ GD I LWSFRSN+         LCFALV
Sbjct: 258 TTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSND--------ILCFALV 303

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot
Match: Q9LSF7 (B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25182 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.7e-10
Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 0


Query: 16  SFGLDTNKRKNRDCDDEPKR----KRRREMVFSSTV-EMPAALRERIEAM-GGTDVQLVT 75
           S  L  NK + R   ++ KR    K+ +   FS T  E P  L   +  M    D +L+ 
Sbjct: 158 SLCLTENKNRKRRAVEQRKRTGGVKKAKVAPFSQTARETPEWLVNVMRDMKEAKDAKLIF 217

Query: 76  QKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSA 135
           +K L  +D N    RL +P   L+ NDF T  E+ ++   + D +  ++IG+   ++D  
Sbjct: 218 EKTLFVTDVNPTQNRLSMPFNNLLRNDFLTSVESRII---DKDIKNDKKIGVGAILVDQR 277

Query: 136 LRETVIGLKLWKI----GSGH-NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVN 192
            ++  + LK W++    G G  NY L   WN   E N L+ GD I LWSFRS        
Sbjct: 278 CKKWGVMLKRWEMKKESGKGSWNYNLICGWNDIVEANGLKEGDNISLWSFRSCG------ 334

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot
Match: Q9FFX2 (B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38490 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 4.8e-10
Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 66  QLVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQ-EEVDRRRRRRIGMQVA 125
           +L+ ++ L +SD N N  RLL+P +KL+ NDF T  E   M + E+ D      IG+   
Sbjct: 237 RLIFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTV 296

Query: 126 IIDSALRETVIGLKLWKI--GSGH---NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNN 185
           +++   ++  +  K+W +   SGH   NY L   WN   + +SL+ GD I LW+FR    
Sbjct: 297 LVNQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRG- 356

Query: 186 AFIVNDHTLCFAL 192
                   LCFAL
Sbjct: 357 -------VLCFAL 361

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot
Match: Q9FFX1 (B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38500 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-08
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 66  QLVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQ----------------- 125
           +L+ ++ L +SD N N  RLLIP +KL+ NDF T EE   M +                 
Sbjct: 265 KLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVC 324

Query: 126 ---EEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKI--GSGH---NYCLASRWNSFAEQ 185
              +E + +    IG    +++   +   +  K+W +   SGH   NY L   WN   + 
Sbjct: 325 QAKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKG 384

Query: 186 NSLESGDYIQLWSFRSNNNAFIVNDHTLCFAL 192
           NSL++GD I LW+FR            LCFAL
Sbjct: 385 NSLKAGDNIGLWTFRCRG--------VLCFAL 408

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot
Match: Q9LRX6 (Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 GN=At3g24850 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 7.6e-08
Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 0


Query: 16  SFGLDTNKRKNRDCDDEPKR----KRRREMVFSSTVE-----MPAALRERIEAMGGTDVQ 75
           S  L  N  + R   +E KR    K+ +   F  T       +   +R+  EA    D +
Sbjct: 171 SLCLTGNTSRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEA---KDAK 230

Query: 76  LVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQEEVDRRRRRRIGMQVAII 135
           L+ +K L  +D N    RL +P   L+ NDF T  E+ ++ +   D    ++IG+   ++
Sbjct: 231 LIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE---DINNNKKIGVGAILV 290

Query: 136 DSALRETVIGLKLWKI----GSGH-NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 192
           D    +  + LK W++    G G  NY L   WN   E N L+ GD I +WSFR      
Sbjct: 291 DQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRG--- 347

[Close]

BLAST of Cp4.1LG11g01930 vs. NCBI nr
Match: XP_023546349.1 (B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 396 bits (1017), Expect = 1.71e-138
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM
Sbjct: 21  MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 80

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM
Sbjct: 81  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 140

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 141 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 200

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVNDHTLCFALVKLDISEGIFNFI
Sbjct: 201 IVNDHTLCFALVKLDISEGIFNFI 224

[Close]

BLAST of Cp4.1LG11g01930 vs. NCBI nr
Match: XP_022962562.1 (B3 domain-containing protein At1g05920-like [Cucurbita moschata])

HSP 1 Score: 389 bits (1000), Expect = 3.26e-136
Identity = 199/204 (97.55%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEP+RKRRREMVFSSTVEMPAALR+RIEAM
Sbjct: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAM 60

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM
Sbjct: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           QVAIID+ALRE+VIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 121 QVAIIDAALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVNDH+LCFALVKLDISEGIFNFI
Sbjct: 181 IVNDHSLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Cp4.1LG11g01930 vs. NCBI nr
Match: KAG6598443.1 (B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 382 bits (980), Expect = 3.40e-133
Identity = 198/204 (97.06%), Postives = 202/204 (99.02%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGVVSKTLDLISSFGL+TNKRKNRDCDDEP+RKRRREMVFSSTVEMPAALRERIEAM
Sbjct: 1   MAQSGVVSKTLDLISSFGLNTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRERIEAM 60

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRR  IGM
Sbjct: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRR--IGM 120

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           QVAIIDSALRE+VIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 121 QVAIIDSALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVNDH+LCFALVKLDISEGIFNFI
Sbjct: 181 IVNDHSLCFALVKLDISEGIFNFI 202

[Close]

BLAST of Cp4.1LG11g01930 vs. NCBI nr
Match: XP_022997537.1 (B3 domain-containing protein At1g05920-like [Cucurbita maxima])

HSP 1 Score: 375 bits (964), Expect = 1.00e-130
Identity = 191/204 (93.63%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGV+SKTLDLISSFGLDTNKRKNRDCDDEP+RKRRREMVFSSTVEMPAALR+RIEAM
Sbjct: 1   MAQSGVLSKTLDLISSFGLDTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAM 60

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQ+V QKQLQESDRNKNHGRLLIPTKKLMN+FATEEEAELMMQEEVDRRRR RIGM
Sbjct: 61  GGTDVQIVMQKQLQESDRNKNHGRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGM 120

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           +VAIID+ALRE+VIGLKLWKIGSGHNYCLAS+WNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 121 EVAIIDAALRESVIGLKLWKIGSGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAF 180

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVN H LCFALVKLDISEGIFNFI
Sbjct: 181 IVNGHNLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Cp4.1LG11g01930 vs. NCBI nr
Match: XP_008445565.1 (PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA0065235.1 B3 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 204 bits (519), Expect = 2.43e-62
Identity = 113/195 (57.95%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 21  TNKRKNRD----CDDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQES 80
           + KRK  D     D  PK++RR++MVFS T+EM A LR+RI+ + G D+Q VTQK+LQ++
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 81  DRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGL 140
           D NKNHGRLLIP KKL NDFA+EEE +L+ Q + +  + +  GM V IID  LR   I L
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKN-GMTVLIIDPQLRNRHIEL 180

Query: 141 KLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHT-------LCF 200
           K+WK+G   +YCL S+WNSF ++NSLESGDYIQLWSFRSNN  FIV   +       LCF
Sbjct: 181 KMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNN-IFIVGHQSQVPVNSNLCF 240

Query: 201 ALVKLDISEGIFNFI 204
           ALVKLDISEGIF FI
Sbjct: 241 ALVKLDISEGIFKFI 253

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL
Match: A0A6J1HD06 (B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC111462959 PE=4 SV=1)

HSP 1 Score: 389 bits (1000), Expect = 1.58e-136
Identity = 199/204 (97.55%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEP+RKRRREMVFSSTVEMPAALR+RIEAM
Sbjct: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAM 60

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM
Sbjct: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           QVAIID+ALRE+VIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 121 QVAIIDAALRESVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVNDH+LCFALVKLDISEGIFNFI
Sbjct: 181 IVNDHSLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL
Match: A0A6J1K5B4 (B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC111492430 PE=4 SV=1)

HSP 1 Score: 375 bits (964), Expect = 4.87e-131
Identity = 191/204 (93.63%), Postives = 200/204 (98.04%), Query Frame = 0


Query: 1   MAQSGVVSKTLDLISSFGLDTNKRKNRDCDDEPKRKRRREMVFSSTVEMPAALRERIEAM 60
           MAQSGV+SKTLDLISSFGLDTNKRKNRDCDDEP+RKRRREMVFSSTVEMPAALR+RIEAM
Sbjct: 1   MAQSGVLSKTLDLISSFGLDTNKRKNRDCDDEPRRKRRREMVFSSTVEMPAALRQRIEAM 60

Query: 61  GGTDVQLVTQKQLQESDRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGM 120
           GGTDVQ+V QKQLQESDRNKNHGRLLIPTKKLMN+FATEEEAELMMQEEVDRRRR RIGM
Sbjct: 61  GGTDVQIVMQKQLQESDRNKNHGRLLIPTKKLMNEFATEEEAELMMQEEVDRRRRMRIGM 120

Query: 121 QVAIIDSALRETVIGLKLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 180
           +VAIID+ALRE+VIGLKLWKIGSGHNYCLAS+WNSFAEQNSLESGDYIQLWSFRSNNNAF
Sbjct: 121 EVAIIDAALRESVIGLKLWKIGSGHNYCLASQWNSFAEQNSLESGDYIQLWSFRSNNNAF 180

Query: 181 IVNDHTLCFALVKLDISEGIFNFI 204
           IVN H LCFALVKLDISEGIFNFI
Sbjct: 181 IVNGHNLCFALVKLDISEGIFNFI 204

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL
Match: A0A5A7VHB3 (B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005760 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.18e-62
Identity = 113/195 (57.95%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 21  TNKRKNRD----CDDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQES 80
           + KRK  D     D  PK++RR++MVFS T+EM A LR+RI+ + G D+Q VTQK+LQ++
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 81  DRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGL 140
           D NKNHGRLLIP KKL NDFA+EEE +L+ Q + +  + +  GM V IID  LR   I L
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKN-GMTVLIIDPQLRNRHIEL 180

Query: 141 KLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHT-------LCF 200
           K+WK+G   +YCL S+WNSF ++NSLESGDYIQLWSFRSNN  FIV   +       LCF
Sbjct: 181 KMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNN-IFIVGHQSQVPVNSNLCF 240

Query: 201 ALVKLDISEGIFNFI 204
           ALVKLDISEGIF FI
Sbjct: 241 ALVKLDISEGIFKFI 253

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL
Match: A0A1S3BCJ5 (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 204 bits (519), Expect = 1.18e-62
Identity = 113/195 (57.95%), Postives = 140/195 (71.79%), Query Frame = 0


Query: 21  TNKRKNRD----CDDEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQES 80
           + KRK  D     D  PK++RR++MVFS T+EM A LR+RI+ + G D+Q VTQK+LQ++
Sbjct: 61  SEKRKKNDNSPGSDHRPKKERRKDMVFSKTIEMSAMLRDRIDELDGFDIQYVTQKRLQDT 120

Query: 81  DRNKNHGRLLIPTKKLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGL 140
           D NKNHGRLLIP KKL NDFA+EEE +L+ Q + +  + +  GM V IID  LR   I L
Sbjct: 121 DMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKNKN-GMTVLIIDPQLRNRHIEL 180

Query: 141 KLWKIGSGHNYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHT-------LCF 200
           K+WK+G   +YCL S+WNSF ++NSLESGDYIQLWSFRSNN  FIV   +       LCF
Sbjct: 181 KMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRSNN-IFIVGHQSQVPVNSNLCF 240

Query: 201 ALVKLDISEGIFNFI 204
           ALVKLDISEGIF FI
Sbjct: 241 ALVKLDISEGIFKFI 253

[Close]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL
Match: A0A6J1CSV9 (B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LOC111013909 PE=4 SV=1)

HSP 1 Score: 191 bits (485), Expect = 3.38e-58
Identity = 101/174 (58.05%), Postives = 130/174 (74.71%), Query Frame = 0


Query: 31  DEPKRKRRREMVFSSTVEMPAALRERIEAMGGTDVQLVTQKQLQESDRNKNHGRLLIPTK 90
           ++ K+ ++ E+VFSST+EMPA LR+RI  +GG D+Q+V QK+LQ++D N+NHGRL IP K
Sbjct: 34  NDQKKHKQLEVVFSSTIEMPAXLRDRIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIK 93

Query: 91  KLMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKIGSGHNYCLA 150
           KL+NDF TEEE +L+ Q+  D  +  + G+   I+D  LRE+ I LK WKIGS   YCL 
Sbjct: 94  KLLNDFTTEEEKQLLDQQ--DEHQNNKNGVXALILDPCLRESTIHLKKWKIGSREIYCLV 153

Query: 151 SRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALVKLDISEGIFNFI 204
           S+WNS A++NSLESGD+IQLWSFR N+       H LCFALVKLDISEGIF FI
Sbjct: 154 SQWNSLAQKNSLESGDFIQLWSFRKNSGT--PTPH-LCFALVKLDISEGIFRFI 202

[Close]

BLAST of Cp4.1LG11g01930 vs. TAIR 10
Match: AT1G05920.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 68.2 bits (165), Expect = 8.9e-12
Identity = 54/176 (30.68%), Postives = 88/176 (50.00%), Query Frame = 0


Query: 26  NRDCDDEPKRKRRR--EMVFSSTVEMPAALRERIEAMGGT-DVQLVTQKQLQESDRNKNH 85
           +R   + P+RK+    E V     + P  L + +  M G  D +L+ +K L  +D +   
Sbjct: 138 DRILSNVPRRKKTTSYEFVPPKHPQEPQWLLQVMSRMNGAGDPKLIIEKNLDSNDVDPRQ 197

Query: 86  GRLLIPTKK-LMNDFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKI 145
            RL IP    + NDF T +E+ L+ ++E+       +G+   ++D   ++  +G K W +
Sbjct: 198 NRLSIPINTVIQNDFLTLDESRLIDEDEI--TNEGNMGVAAFLVDQRTKKWNMGFKQWFM 257

Query: 146 ----GSGH-NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALV 193
               GS + ++ L   W++  E N L+ GD I LWSFRSN+         LCFALV
Sbjct: 258 TTDSGSSYWSFVLRGEWSNVVETNGLKEGDKISLWSFRSND--------ILCFALV 303

[Close]

BLAST of Cp4.1LG11g01930 vs. TAIR 10
Match: AT5G38490.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-11
Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 0


Query: 66  QLVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQ-EEVDRRRRRRIGMQVA 125
           +L+ ++ L +SD N N  RLL+P +KL+ NDF T  E   M + E+ D      IG+   
Sbjct: 237 RLIFERTLFKSDVNSNLSRLLMPFQKLIRNDFLTPAECRAMQKDEDNDEEDDENIGVGTV 296

Query: 126 IIDSALRETVIGLKLWKI--GSGH---NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNN 185
           +++   ++  +  K+W +   SGH   NY L   WN   + +SL+ GD I LW+FR    
Sbjct: 297 LVNQRFQKWGLRFKIWAMEKDSGHGTLNYTLNWGWNDVVKSSSLKVGDKISLWTFRCRG- 356

Query: 186 AFIVNDHTLCFAL 192
                   LCFAL
Sbjct: 357 -------VLCFAL 361

[Close]

BLAST of Cp4.1LG11g01930 vs. TAIR 10
Match: AT5G38500.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 59.7 bits (143), Expect = 3.2e-09
Identity = 48/152 (31.58%), Postives = 70/152 (46.05%), Query Frame = 0


Query: 66  QLVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQ----------------- 125
           +L+ ++ L +SD N N  RLLIP +KL+ NDF T EE   M +                 
Sbjct: 265 KLIFERTLFKSDVNSNLSRLLIPFQKLIRNDFLTPEECRAMQEDKDKDDEDISVGTILVC 324

Query: 126 ---EEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKI--GSGH---NYCLASRWNSFAEQ 185
              +E + +    IG    +++   +   +  K+W +   SGH   NY L   WN   + 
Sbjct: 325 QAKQEDEDKDDEDIGAGTILVNQRFKMWGLRFKIWGMEKDSGHGTLNYILNWDWNDVVKG 384

Query: 186 NSLESGDYIQLWSFRSNNNAFIVNDHTLCFAL 192
           NSL++GD I LW+FR            LCFAL
Sbjct: 385 NSLKAGDNIGLWTFRCRG--------VLCFAL 408

[Close]

BLAST of Cp4.1LG11g01930 vs. TAIR 10
Match: AT3G24850.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 58.9 bits (141), Expect = 5.4e-09
Identity = 56/191 (29.32%), Postives = 85/191 (44.50%), Query Frame = 0


Query: 16  SFGLDTNKRKNRDCDDEPKR----KRRREMVFSSTVE-----MPAALRERIEAMGGTDVQ 75
           S  L  N  + R   +E KR    K+ +   F  T       +   +R+  EA    D +
Sbjct: 171 SLCLTGNTSRKRRAVEERKRTGGFKKAKVAPFPGTARDTPKWLVKVMRDMKEA---KDAK 230

Query: 76  LVTQKQLQESDRNKNHGRLLIPTKKLM-NDFATEEEAELMMQEEVDRRRRRRIGMQVAII 135
           L+ +K L  +D N    RL +P   L+ NDF T  E+ ++ +   D    ++IG+   ++
Sbjct: 231 LIFEKTLFVTDINPTQNRLSMPFNNLLQNDFLTSVESRIIKE---DINNNKKIGVGAILV 290

Query: 136 DSALRETVIGLKLWKI----GSGH-NYCLASRWNSFAEQNSLESGDYIQLWSFRSNNNAF 192
           D    +  + LK W++    G G  NY L   WN   E N L+ GD I +WSFR      
Sbjct: 291 DQRSVKWGVMLKRWELKKESGKGSWNYNLICGWNDVVEANGLKEGDNISVWSFRCRG--- 347

[Close]

BLAST of Cp4.1LG11g01930 vs. TAIR 10
Match: AT2G24670.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-08
Identity = 52/167 (31.14%), Postives = 77/167 (46.11%), Query Frame = 0


Query: 34  KRKRRREMVFSSTVE-MPAALRERIEAMGGTDVQ----LVTQKQLQESDRNKNHGRLLIP 93
           K KR  +   S T E  P  L   + +  G DV+     +  K+L ++D + +  RL IP
Sbjct: 93  KAKRSTDASSSKTREPTPGWLISLMRSKNGGDVEDNSKKIIDKELFQTDVDPHQSRLSIP 152

Query: 94  TKKLMN-DFATEEEAELMMQEEVDRRRRRRIGMQVAIIDSALRETVIGLKLWKIGSGHNY 153
             +++  +F   EE   +   E D  R R+ G+   ++DS LRE  + L+L  +     Y
Sbjct: 153 VSQIVELEFLNHEEKRAI---EEDANRVRKEGVDAILVDSHLREFPVNLRLRDMRGILLY 212

Query: 154 CLASRWNSFAEQNSLESGDYIQLWSFRSNNNAFIVNDHTLCFALVKL 195
            L + WN       LE    I+LWSF +        D TL FALV L
Sbjct: 213 NLVAGWNQVVTDCLLEENTNIRLWSFHA--------DDTLYFALVPL 248

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g01930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5RM09	1.3e-10	30.68	B3 domain-containing protein At1g05920 OS=Arabidopsis thaliana OX=3702 GN=At1g05...	[more]
Q9LSF7	3.7e-10	31.91	B3 domain-containing protein At3g25182 OS=Arabidopsis thaliana OX=3702 GN=At3g25...	[more]
Q9FFX2	4.8e-10	34.59	B3 domain-containing protein At5g38490 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]
Q9FFX1	4.5e-08	31.58	B3 domain-containing protein At5g38500 OS=Arabidopsis thaliana OX=3702 GN=At5g38...	[more]
Q9LRX6	7.6e-08	29.32	Putative B3 domain-containing protein At3g24850 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cp4.1LG11g01930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546349.1	1.71e-138	100.00	B3 domain-containing protein At1g05920-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962562.1	3.26e-136	97.55	B3 domain-containing protein At1g05920-like [Cucurbita moschata]	[more]
KAG6598443.1	3.40e-133	97.06	B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022997537.1	1.00e-130	93.63	B3 domain-containing protein At1g05920-like [Cucurbita maxima]	[more]
XP_008445565.1	2.43e-62	57.95	PREDICTED: B3 domain-containing protein At3g25182-like [Cucumis melo] >KAA006523...	[more]

BLAST of Cp4.1LG11g01930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HD06	1.58e-136	97.55	B3 domain-containing protein At1g05920-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1K5B4	4.87e-131	93.63	B3 domain-containing protein At1g05920-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5A7VHB3	1.18e-62	57.95	B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A1S3BCJ5	1.18e-62	57.95	B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
A0A6J1CSV9	3.38e-58	58.05	B3 domain-containing protein At2g31420-like OS=Momordica charantia OX=3673 GN=LO...	[more]

BLAST of Cp4.1LG11g01930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05920.1	8.9e-12	30.68	Domain of unknown function (DUF313)	[more]
AT5G38490.1	3.4e-11	34.59	Domain of unknown function (DUF313)	[more]
AT5G38500.1	3.2e-09	31.58	Domain of unknown function (DUF313)	[more]
AT3G24850.1	5.4e-09	29.32	Domain of unknown function (DUF313)	[more]
AT2G24670.1	2.7e-08	31.14	Domain of unknown function (DUF313)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 61..186 e-value: 6.3E-16 score: 59.9
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 69..185
IPR005508	B3 domain-containing protein At2g31720-like	PFAM	PF03754	DUF313	coord: 48..155 e-value: 2.0E-19 score: 69.8
IPR005508	B3 domain-containing protein At2g31720-like	PANTHER	PTHR31541	B3 DOMAIN PLANT PROTEIN-RELATED	coord: 25..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..41
None	No IPR available	PANTHER	PTHR31541:SF25	DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED	coord: 25..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g01930.1	Cp4.1LG11g01930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding