Cp4.1LG11g01660 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g01660
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	Uroporphyrinogen-III synthase
Location	Cp4.1LG11: 920757 .. 927750 (+)
RNA-Seq Expression	Cp4.1LG11g01660
Synteny	Cp4.1LG11g01660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAATCCACTTTAAATAGTGAGAATATTTGGATTAATTAATTTTTGGGTCATTGAGTTTTATTATGTCAACATCTGGCGCCGTCTCAGTTTGTTCATCTCCTCCCCTCCCCATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCAAACGCCTTCAGTTGTTTCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTAGCCTGTTTCTCCTCCACTTTGACTTCATCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACAAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGTAAATTTTCGTTCCTCTCGATTTTGTAATCAGAGGATGTTTTGTTCAGATTGTTGATTTATCTTTTGATTCCTCGAGCCTTTTTTTTTTTGCTTTGTTCTCGTTCGCCAGTTTGATTCTCATTCTACTTAGGCATTGTGTTAATCTTATATACATGTGATGCAGCGATTTGTAAGTCGACGCGTTTGACTAAATGTTGGAATGAATGCTGGTTGTTCGAGTCTTTTGATTAATTGTTGCCTTCTCAAGTTCTTCACCGATTTTCTAGATCTTTCCGAAATTGTTAATCATTTTGAGACTCATTACTACCTTTACTTCTGCTGGAATATTGTTGTTATTGTCTTTTTGGAGAAGATGAGGAATGTGCACTTTAGTGGACGTTTCTTGCCGCTGAAGTAAATTAGAACTGTAATAGTTTGTAAGTTCCAATGTAGTTTCTGTTTTCCAAAAATTAAAATGTCTTTTATCATCAGTTGTAAGATACTCGAAAGTACTTAGGTATATTATCAGAACTATATTATAAGAACGCCTCTAACATCAAATGTGCTGATCTATACTCGAAAGTAGCCTCAATATGAGTTTAATGTCAGTACTTAGATATATTATCAGAACTATATTGAACCATTCCATCGCTGCATGCGGTGGTAAATTTCTTGTTAATCTCAGTTCTTTTTTTTTTCATATAATAGCTTATTCGTAATAGCTGCTCTGCATTGTTGATTTTAGGAGGCGTTGATATTAAGAATATTGTTCTTTTTTATTGGATGCGTATAGTACTTTCGTGGTGATTAGTGCTTCAATAGGTACTATGAATCCTGTTCATTGCTTAGTCTCTCGTAGTATTTCATCCAGGAAACCGATCTATTGCTTCAATCAAGAATAGGTAGGGTAGGATGGAGAATAGACATGATGTTTTATCTTGAACTTTTGTCCATTATCATCCACTAATGGATGAATATTTCTGACATGGACATATTTGTTACATAACTTAAAGTTACTGATGTTTTACTCTACATACCATTGCTTCTCTCCTCAATTTCCTTTTCTTTTTCCTAAAAAAACATTCCTCGACTATTCTTTAACAAACCTCCTGTGAAGGTAAAATAATAGATATTTTTGCGTGGATGAGCAAGCTACAATCCAATCTATGAAGTTTGAAATCAATATAAACCAGACTATTGATATTTCTGATGTTGATCGCAGGCAAGACATGGAATAAACTGTTTGGAGCTTCCACTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGGTACGTCCTTCAGGATTGGTTTTCTCTTCTCGCTCTCCTCAAAATCTCACTATCCTCGTTCAACTGATTCTTTCTATCTCAATTGCACGCCTATATTTATTAGTAATTTTCAATGTACCATAGAATATTTGGAAAACAATTAATTGGCACAACCGTTTACAATCTTCTCTCCCTCTTCATTAACAGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGATTGGTGTTCCTACAGGCATGGAAGTAAGGGTTAGAACTAACTCACTGGACTCTCACCATTCTTGTATGTCACACAATTTCATATGTAAAAAAAAAAAAAAAAAAATAATAATAATAATAAAAATAAAAATTGACAGTTGTTAGTTTCCTAGAACTTTGAAAGGTTTGAAGTTTCATGAGTTTATTAAAAATATGTTTTGAATATTTTTCCTATTTAATTTATCAGCATTTGCATACAACTTGTTTTCTTTGTAGAGAATGTTAGGACTTTAAGAAATTCATACTCATCATACTAGTTGGTCAACTTGGTCTAGCGCTTTAGAATTTGTTGAGTAATGGATGGTTTGTTTTACACGTGATACAATACAACCGAAGGAAACATCATATTACCATTTGATAATGTAAATTCTTATGTTAATGCTATTGGATAAATTCTATTTTACAACATTAAATGCGTTGTTAGGACCTTTTTTCTTTAACCTGTATGTGGCTGTATGGTACATGAGCTATATCATTCTCTTTGAAATGTATTGTTGGTCAAGTGAGGCAAAACGTGTTTTTGAATTTTGTTTTATTACTGGTCATCTCTTTCTTGCTGCTGAATAGTAATTTGCATAGTTGGTTATATATAATCATGATCCACAGTGCACTTTTTTTACAAATGACGAGCACAAACTCAAGATTGATTAATACTTTCCCATCACGTGTTCCATTAAAGCTGCTTTAGGTCGTCCTTGAGTGATACCTTCACATTATTTTGTTCCTTAGGGCCGCTGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAGTGTTGCAATCATCAAACTTACTCGAAGTGGCGTTTGCACCCTCAAAAGGTAAGATGTATGTCAAAATCAAGTCTCGTGCATGATGCACATATATTCATTATTTGTGGATTGCATTTGTTTGCATGATGTTAACATTTTTAGCTATATCATTTACCTTCTGTCTTAAGTCAAATAAGATGATGAAAAGATCTCAAGAAAGACAGTGAAGTAGTATGGCACATCAGAACTATCAAAACAACTCCAAAGAAATATGTCAAATACATTAGATATTATTCGTGCTGGAAATTTTTATTCTTGAATCCTCACTCTGTTATGAACGTTGTTGAACAATCACAATTTGTCAGGGGTATTTGTATCTTCGCAGCAGGCTTTTCTTTTCTTTTCTTTTTGAGAGAACATAGACGATTTATTATTCAATGTGTGTATACATCTGGATTTTATTAGAGTAAGAATCCTTCTACGAAGATTCGTGGATGTCCTACATATCTTTTGTTTATTATTATTCTTATTCTTATTATTGTTATTATGATGATGATGATGGTGATGATGATTATTATTTGTTAGGATGTTGTCCTGCACATACATAATTTGAAATATTTGTCCAATTATCTCTTTCAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTGGGGAATACAAAGTGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGGTATGCATCGTACTTTTTTTCTTTTACCCTCTTGAGAGCTATTTTCATTAGATAGAGTGGAAACAATGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTCTCATGCCATAACTATAAGAAATTTTATTTGAACTGGAATTATTGCTACTAAATTGTTGCTTGATGGCTTGCAGCTATCAATTGTTTAAGGTTTACTTGATTAGCCACTCTTTGTGATAAGTCCAGTTTTACTTGGACCAGTAAAACCTAATTGCCACAGCTGAAAATTCAAAATACTTTGAATTAGATTAATAACATTTTAATGGCATTCCCCTCAAATCAAGTACTGACATCTCTTTACTTTTGATTCATGTAAAATAAAAACACAAAATACGAACAATGTGAATAATTGGCAGGTTGTTTATGTTCTAATCACTTAAAAAATAGGGAACTTTTGTTCTGAAAAACTCTAAGGAAGAGGAAGTTATTTATTGAAGTACTTTAAATTTCAGACATAGTGGTGCCTGAAACTAGATGCTGACTCTTGTTGCTTAAGTCAATACTTTTTCGTTTCTAGCAATATTTCATATTTCGTAGACTGTCATCACTCTTTGTGGTAGATAGTATATATTATTTACAAATATATTTTCCTCCTTGTTTTATGAAAACTGTAGTGGATATCTGATATTCCTGTCAAGTGATTTGTTTGCAAGTATGTAGTAGCGGGCTTTTATCTGCTACTCACTTTTTTCTTTTTTCTTTTTTAAAAAATAAAGTTTAGTATTTGGTGGTCTCACTGTTGCACCGTAGTGTTCCGTCTATTATAACTAAAAGCAAAATAATGGCTTTTAGAAATAACCTTGGTATCCCTCTTTGCTATCTGTACAGAGGAAGTCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGGTAAAGTATTCATGTGCCTTAGTATAACACTGAAAATTTAAAGATGAACCACCCTGATTCAGCATTGCATGCGGTTTTTAGAGGTGTATACATCTGCTTGATCTTGAGTGAATTTAATAAATATAATTTACTATCCCAATCTTAGAGGGAATCAGTAAAGCGAGTTACAGCATTACTAATGATAGATGCTTAAAAGAACTGTTATATGGGACTTTCTTTAAGTGTACGATGCCAATCCTTTGGACAATTAGCTGCATTGGGGAAAGAGATTTGTGGAAGATGCTCAGCGAACCCGTACCTAGCGTATAGGAGAACTTTACAAGGAAATTGTGAACTGCACAACTAAATAAAAGATTCAAATTAAACTGAATTACATTGAGTGAGTAATATATATTTCCTTCCAGGAGTAGTCTTGAATCAGAATACCTTGTTCCCTGCACCATTCTCTAAGTAACCTGAACAGGCTATGTGAAACATTACGGTCCACTCAAACATTATTGATTGGTACCTTTCAGGCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCAGTATGAACTGTTTTTTTCCTTTATTTTTTGCATGTATCACTTTGTCTATTTGATTACTTTAGTTATCTCATCCGGGGGAGAGAGAATTGTAATGTTAATTTGTTTGCTCCATCTTGGCATGGATCATGAATCTGTCGCAACAGCGCATGGGTCAACCTTATTTCAGAGCCGAAGGAGTGGGAAAAGTCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCTAAGAATCCTGGCTTGGAAGGGTAACTTAATCCGTACTTCCAACTTAACAATCGTCTAGTTGATGCATTTCTTTTCTTAGTTCAGATTCCATGCTTAACAATCTTTTCAATTGATCGAATATATTGAATGCTGAATCTACAAATTGTGATAACTGTGATGCAGGTGGGTTGATAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGATCAAAGCATCTCAAACATAGGGTCGTCATGGAATGATCACACCATCCATTTGCCCGAGTTCTTCGAGGTTAGGCAAACGGAACTTTTCTCAGATAATTAATGAACATTTTGGTTCTTCTATTCTCTTTTTTGTTAGTAGAATGCAATTTGTAAATTCTCAATGAATAGGATAGGTCCGTGTAGTAAAAAAGAAAAAAAAAAAGAAAGAGTATGACAGGTATATCGCTCCATTGTCCAATGTCCAATTTTCTTTCTTTTGTCTTTCCTCTTAACTTTGGTTTGAAGAAATTAAGTTCGGTAGCTCCAACTAATAAAGTTGCCACGTTTGTAATTCACCATCCAAATTAATTGCAAGATTCCTGCAGCACAGCAGCCTTCCGTTACCTTTTAAGACTTTTGGGCTATAAAATTACGATCCTAGAATTTTGAAATGTCTTGGATCCTGTAGAACAAATATAAAAAAACTTTCAAATTTGTTTGAGAAATCCTAGAATTTATAGAAGTTCCTAAATATGTAAAATTAATTGATCTAAAATTTAATTTTATGTTTAGCATGTTAATGAATATTTAGCATTGGTCTATGAATTTTAAAAACATTGAATAAGTCAAAATTCCTAATGGATATATTTTTGTCAAGTATTTGAAGTTTCTATCTAGTATATGATGTATTTACATTTTTTAATTTAATATATTACTAAGGGTGAAAGTTAAAATGAATTGATGATAAATTATACAAAATAATACTTAGTAAATTGAAAGAAGAAAAATAGAGAAAAATGTTACTAAGGGCAATTTTTTTTTTGAAATCTCTATGGAGTTATTAAAAATTTGGAGAAATAACTAGAAATTTAGTTATTTTTCTCCGAAGTCAATACAAGTTTGTTAATAATTTCAACCTCACTGAAAATGAATAAAAACTTGGAATATTGCAAATATTTTTAAAATTAGTTCACAACTACGCAAGTCTCTTAAGAATGAAGCATTTTAAAACCATTTTCAAAAATAAAAAACTAAATCTCCATTTAATATCCACTTAATATTTGAAATATTGAAAATTTTGATAGTATTTACCTAATTTTTTTTAAAGTTAAATTTCAAAAACAAAAACAAGTTTTTAAAAATTAGAGTTTCATTTGTTTGTTTTATTGCCACTTCTTTATCATATTTTTATCTTTTCTTTAACTGAATTCTTAGTTAAACTAAGAAAACCACAAACAAGTTTCTAAAAGCTCATTTTTTATTTTTCCAAAAATTAACTTGATTTTTGAAGACATTCTTAAAAAGTAGATATAAACCAAAACAAAAAAATAAAATAATAATAATAATAATAATAAATAAGTAGAAATAGTATTTATAAGCCTAATTAAAAAAAAAAAAAAACTAATAGTTTTCAAAACTTGGCTTTGCATTTTGAAAATACAACTAAAAAAGTCAATAAACAAAGGAAACAATCAGTGTAAATAGTGTCTATGAAATTAATTTTTAAAAAAGCAAAAACTAAAAAAACTAAAAGCAAAATACAAATGAACAATTCAATTATTAATAAAATT

mRNA sequence

AAAATCCACTTTAAATAGTGAGAATATTTGGATTAATTAATTTTTGGGTCATTGAGTTTTATTATGTCAACATCTGGCGCCGTCTCAGTTTGTTCATCTCCTCCCCTCCCCATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCAAACGCCTTCAGTTGTTTCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTAGCCTGTTTCTCCTCCACTTTGACTTCATCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACAAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCACTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGATTGGTGTTCCTACAGGCATGGAAGGCCGCTGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAGTGTTGCAATCATCAAACTTACTCGAAGTGGCGTTTGCACCCTCAAAAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTGGGGAATACAAAGTGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGAGGAAGTCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGGCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCACGCATGGGTCAACCTTATTTCAGAGCCGAAGGAGTGGGAAAAGTCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCTAAGAATCCTGGCTTGGAAGGGTGGGTTGATAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGATCAAAGCATCTCAAACATAGGGTCGTCATGGAATGATCACACCATCCATTTGCCCGAGTTCTTCGAGGTTAGGCAAACGGAACTTTTCTCAGATAATTAATGAACATTTTGGTTCTTCTATTCTCTTTTTTGTTAGTAGAATGCAATTTGTAAATTCTCAATGAATAGGATAGGTCCGTGTAGTAAAAAAGAAAAAAAAAAAGAAAGAGTATGACAGGTATATCGCTCCATTGTCCAATGTCCAATTTTCTTTCTTTTGTCTTTCCTCTTAACTTTGGTTTGAAGAAATTAAGTTCGGTAGCTCCAACTAATAAAGTTGCCACGTTTGTAATTCACCATCCAAATTAATTGCAAGATTCCTGCAGCACAGCAGCCTTCCGTTACCTTTTAAGACTTTTGGGCTATAAAATTACGATCCTAGAATTTTGAAATGTCTTGGATCCTGTAGAACAAATATAAAAAAACTTTCAAATTTGTTTGAGAAATCCTAGAATTTATAGAAGTTCCTAAATATGTAAAATTAATTGATCTAAAATTTAATTTTATGTTTAGCATGTTAATGAATATTTAGCATTGGTCTATGAATTTTAAAAACATTGAATAAGTCAAAATTCCTAATGGATATATTTTTGTCAAGTATTTGAAGTTTCTATCTAGTATATGATGTATTTACATTTTTTAATTTAATATATTACTAAGGGTGAAAGTTAAAATGAATTGATGATAAATTATACAAAATAATACTTAGTAAATTGAAAGAAGAAAAATAGAGAAAAATGTTACTAAGGGCAATTTTTTTTTTGAAATCTCTATGGAGTTATTAAAAATTTGGAGAAATAACTAGAAATTTAGTTATTTTTCTCCGAAGTCAATACAAGTTTGTTAATAATTTCAACCTCACTGAAAATGAATAAAAACTTGGAATATTGCAAATATTTTTAAAATTAGTTCACAACTACGCAAGTCTCTTAAGAATGAAGCATTTTAAAACCATTTTCAAAAATAAAAAACTAAATCTCCATTTAATATCCACTTAATATTTGAAATATTGAAAATTTTGATAGTATTTACCTAATTTTTTTTAAAGTTAAATTTCAAAAACAAAAACAAGTTTTTAAAAATTAGAGTTTCATTTGTTTGTTTTATTGCCACTTCTTTATCATATTTTTATCTTTTCTTTAACTGAATTCTTAGTTAAACTAAGAAAACCACAAACAAGTTTCTAAAAGCTCATTTTTTATTTTTCCAAAAATTAACTTGATTTTTGAAGACATTCTTAAAAAGTAGATATAAACCAAAACAAAAAAATAAAATAATAATAATAATAATAATAAATAAGTAGAAATAGTATTTATAAGCCTAATTAAAAAAAAAAAAAAACTAATAGTTTTCAAAACTTGGCTTTGCATTTTGAAAATACAACTAAAAAAGTCAATAAACAAAGGAAACAATCAGTGTAAATAGTGTCTATGAAATTAATTTTTAAAAAAGCAAAAACTAAAAAAACTAAAAGCAAAATACAAATGAACAATTCAATTATTAATAAAATT

Coding sequence (CDS)

ATGTCAACATCTGGCGCCGTCTCAGTTTGTTCATCTCCTCCCCTCCCCATGGCTCCAGTTTCTCTCTCTTCTTTCTCCCAAACGCCTTCAGTTGTTTCTTCGCCTTGTCTACTACAGCTTTACCGGCGAATCTTACTTCCTCGCAGAACGCTAGCCTGTTTCTCCTCCACTTTGACTTCATCTGCTTCGATCACGTCTTCGTCAATTTCGGCGCCAAAAGTAGTGGTTACAAGAGAGCGCGGCAAGAACGGGAAGCTCATCGATGCTCTGGCAAGACATGGAATAAACTGTTTGGAGCTTCCACTCATTCAACACAGTCAAGGACCTGACTTGAATAGGTTACACTCTGTACTTAGTGATTCTGTATTTGATTGGATCATTATAACCTCCCCTGAAGCTGGATTGGTGTTCCTACAGGCATGGAAGGCCGCTGGAATGCCAAAAGTTAGAATAGGTGTTGTTGGAGCTGGTACAGCTAACATTTTTGACGAAGTGTTGCAATCATCAAACTTACTCGAAGTGGCGTTTGCACCCTCAAAAGCAATAGGCAAGGTCTTGGCTTCCGAGCTTCCGAAGTTGGGGAATACAAAGTGCAGTGTCTTATATCCTGCTTCTACCAAAGCAAGCAATGATATTGAGGAAGTCCTTTCAAATCGTGGATTTGAGGTCATGAGGCTCAACACCTATACTACGGCACCTGTTGATTACGTTGATCAATTCATTCTCGAGCAAGCACGTTCATTGCCTGTTGTCACAGTGGCTTCACCTTCTGCAATTCACGCATGGGTCAACCTTATTTCAGAGCCGAAGGAGTGGGAAAAGTCACTTGCCTGTATTGGGGAAACAACTGCAGCAGCCGCAAAAAGATTAGGATTGAAAAACATATACTACCCTAAGAATCCTGGCTTGGAAGGGTGGGTTGATAGTATATTGGAAGCGCTAAGATCAGAAGCTCAAGTTGTTTGA

Protein sequence

MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSKAIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEALRSEAQVV

Homology

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BLAST of Cp4.1LG11g01660 vs. ExPASy Swiss-Prot
Match: O48721 (Uroporphyrinogen-III synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=UROS PE=2 SV=2)

HSP 1 Score: 345.5 bits (885), Expect = 6.4e-94
Identity = 173/265 (65.28%), Postives = 216/265 (81.51%), Query Frame = 0


Query: 55  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRL 114
           SS+++SS+S  SSS S P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL
Sbjct: 48  SSSVSSSSSSVSSSNSIPQVVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRL 107

Query: 115 HSVLSDSVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSN-LLE 174
            SVL+D  FDWIIITSPEAG VFL+AWK A  P+V+IGVVGAGTA +F+E ++S++ LL 
Sbjct: 108 ASVLNDKSFDWIIITSPEAGSVFLEAWKTASSPEVQIGVVGAGTARVFEEAMKSADGLLH 167

Query: 175 VAFAPSKAIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAP 234
           VAF PSKA GKVLASELP+    + SVLYPAS KA NDI E LS RGFEV+RLNTYTT P
Sbjct: 168 VAFTPSKATGKVLASELPEKVGKRSSVLYPASLKAGNDIVEGLSKRGFEVVRLNTYTTVP 227

Query: 235 VDYVDQFILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLK 294
           V  VD  +L+QA S PV++VASPSA+ AW++LI   ++W   +ACIGETTA+AA+RLGLK
Sbjct: 228 VQSVDTVLLQQALSAPVLSVASPSAVRAWLHLIQNEEQWSNYVACIGETTASAARRLGLK 287

Query: 295 NIYYPKNPGLEGWVDSILEALRSEA 319
           N+YYP+ PGLEGWV+SI+EAL + A
Sbjct: 288 NVYYPEKPGLEGWVESIMEALGAHA 312

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BLAST of Cp4.1LG11g01660 vs. ExPASy Swiss-Prot
Match: Q10QR9 (Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=UROS PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 4.8e-89
Identity = 166/257 (64.59%), Postives = 194/257 (75.49%), Query Frame = 0


Query: 64  ITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVF 123
           I  SS   P VVVTRERGKN KLI AL +H +  LELPLI+H +GPD +RL +VL D  F
Sbjct: 39  IACSSPPPPDVVVTRERGKNAKLIAALEKHNVQSLELPLIKHVEGPDTDRLSAVLRDEKF 98

Query: 124 DWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQ-SSNLLEVAFAPSKAI 183
           DWI ITSPEA  VFL+ WKAAG PKVRI VVGAGT  +FDEV+Q +   LEVAF+PSKA+
Sbjct: 99  DWITITSPEAAAVFLEGWKAAGNPKVRIAVVGAGTERVFDEVIQYNDGSLEVAFSPSKAM 158

Query: 184 GKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFIL 243
           GK LASELP+   T C VLYPAS KA ++I+  LSNRGFEV RLNTYTT  V  VD  IL
Sbjct: 159 GKFLASELPRTTETTCKVLYPASAKAGHEIQNGLSNRGFEVTRLNTYTTVSVQDVDPLIL 218

Query: 244 EQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPG 303
           + A S PVV VASPSA+ AW+NL S+   W  ++ACIGETTA+AAK+ GLK+IYYP  PG
Sbjct: 219 KPALSAPVVAVASPSALRAWLNLASQVDNWGNAIACIGETTASAAKKFGLKSIYYPTTPG 278

Query: 304 LEGWVDSILEALRSEAQ 320
           L+GWV+SILEALR+  Q
Sbjct: 279 LDGWVESILEALRAHGQ 295

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BLAST of Cp4.1LG11g01660 vs. NCBI nr
Match: XP_023547155.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 617 bits (1590), Expect = 3.09e-222
Identity = 321/321 (100.00%), Postives = 321/321 (100.00%), Query Frame = 0


Query: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60
           MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS
Sbjct: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60

Query: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120
           SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD
Sbjct: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120

Query: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180
           SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK
Sbjct: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180

Query: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240
           AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF
Sbjct: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240

Query: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300
           ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN
Sbjct: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300

Query: 301 PGLEGWVDSILEALRSEAQVV 321
           PGLEGWVDSILEALRSEAQVV
Sbjct: 301 PGLEGWVDSILEALRSEAQVV 321

[Close]

BLAST of Cp4.1LG11g01660 vs. NCBI nr
Match: XP_022962039.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata] >XP_022962040.1 uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 597 bits (1538), Expect = 2.50e-214
Identity = 314/321 (97.82%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60
           MSTSGAVSVCSSP LPMAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTS
Sbjct: 1   MSTSGAVSVCSSP-LPMAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTS 60

Query: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120
           SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD
Sbjct: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120

Query: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180
           SVFDWIIITSPEAGLVFLQAWK AGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK
Sbjct: 121 SVFDWIIITSPEAGLVFLQAWKDAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180

Query: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240
           AIGKVLASELPKLGNTKCSVLYPASTKASNDIEE LSNRGFEVMRLNTYTT+PVDYVDQF
Sbjct: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTSPVDYVDQF 240

Query: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300
           ILEQARSLPVVTVASPSAI AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN
Sbjct: 241 ILEQARSLPVVTVASPSAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300

Query: 301 PGLEGWVDSILEALRSEAQVV 321
           PGLEGWVDSILEALRSEAQVV
Sbjct: 301 PGLEGWVDSILEALRSEAQVV 320

[Close]

BLAST of Cp4.1LG11g01660 vs. NCBI nr
Match: XP_022996969.1 (uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 596 bits (1536), Expect = 5.05e-214
Identity = 315/321 (98.13%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60
           MSTSGAVSV SSP LPMAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTS
Sbjct: 1   MSTSGAVSVFSSP-LPMAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTS 60

Query: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120
           SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD
Sbjct: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120

Query: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180
           SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK
Sbjct: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180

Query: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240
           AIGKVLASELPKLGNTKCSVLYPASTKASNDIEE LSNRGFEVMRLNTYTTAPVDYVDQF
Sbjct: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTAPVDYVDQF 240

Query: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300
           ILEQARSLPVVTVASPSAI AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN
Sbjct: 241 ILEQARSLPVVTVASPSAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300

Query: 301 PGLEGWVDSILEALRSEAQVV 321
           PGLEGWVDSILEALRSEAQVV
Sbjct: 301 PGLEGWVDSILEALRSEAQVV 320

[Close]

BLAST of Cp4.1LG11g01660 vs. NCBI nr
Match: KAG6598391.1 (Uroporphyrinogen-III synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 574 bits (1480), Expect = 9.92e-206
Identity = 298/305 (97.70%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 17  MAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 76
           MAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV
Sbjct: 1   MAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAPKVVV 60

Query: 77  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 136
           TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV
Sbjct: 61  TRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAGLV 120

Query: 137 FLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSKAIGKVLASELPKLGNT 196
           FLQAWK AGMPKVRIGVVGAGTANIFDE+LQSSNLLEVAFAPSKAIGKVLASELPKLGNT
Sbjct: 121 FLQAWKDAGMPKVRIGVVGAGTANIFDEMLQSSNLLEVAFAPSKAIGKVLASELPKLGNT 180

Query: 197 KCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVVTVASP 256
           KCSVLYPASTKASNDIEE LSNRGFEVMRLNTYTT+PVDYVDQFILEQARSLPVVTVASP
Sbjct: 181 KCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTSPVDYVDQFILEQARSLPVVTVASP 240

Query: 257 SAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEALRS 316
           SAI AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEALRS
Sbjct: 241 SAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEALRS 300

Query: 317 EAQVV 321
           EAQVV
Sbjct: 301 EAQVV 305

[Close]

BLAST of Cp4.1LG11g01660 vs. NCBI nr
Match: XP_038885202.1 (uroporphyrinogen-III synthase, chloroplastic [Benincasa hispida])

HSP 1 Score: 530 bits (1364), Expect = 9.74e-188
Identity = 279/308 (90.58%), Postives = 288/308 (93.51%), Query Frame = 0


Query: 16  PMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRT--LACFSSTLTSSASITSSSISAPK 75
           PMAP+SLSSFS   SVV SPCL QLYRRILLPRRT  L C SST     SITSSSISAP+
Sbjct: 19  PMAPISLSSFSHPASVVPSPCL-QLYRRILLPRRTPTLVCSSST-----SITSSSISAPE 78

Query: 76  VVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEA 135
           VVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRLHSVLSDSVFDWI+ITSPEA
Sbjct: 79  VVVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLHSVLSDSVFDWIVITSPEA 138

Query: 136 GLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSKAIGKVLASELPKL 195
           GLVFL+AWKAAGMPKVRIGVVGAGTANIF+EVLQSS LLEVAFAPSKAIGKVLASELPKL
Sbjct: 139 GLVFLEAWKAAGMPKVRIGVVGAGTANIFEEVLQSSKLLEVAFAPSKAIGKVLASELPKL 198

Query: 196 GNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVVTV 255
           GN +CSVLYPASTKASNDIEE LSNRGFEVMRLNTYTTAPVDYVDQ ILEQARSLPVVTV
Sbjct: 199 GNARCSVLYPASTKASNDIEECLSNRGFEVMRLNTYTTAPVDYVDQTILEQARSLPVVTV 258

Query: 256 ASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEA 315
           ASPSA+ AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEA
Sbjct: 259 ASPSAVRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEA 318

Query: 316 LRSEAQVV 321
           LRSEAQVV
Sbjct: 319 LRSEAQVV 320

[Close]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL
Match: A0A6J1HDZ7 (Uroporphyrinogen-III synthase OS=Cucurbita moschata OX=3662 GN=LOC111462623 PE=3 SV=1)

HSP 1 Score: 597 bits (1538), Expect = 1.21e-214
Identity = 314/321 (97.82%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60
           MSTSGAVSVCSSP LPMAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTS
Sbjct: 1   MSTSGAVSVCSSP-LPMAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTS 60

Query: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120
           SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD
Sbjct: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120

Query: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180
           SVFDWIIITSPEAGLVFLQAWK AGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK
Sbjct: 121 SVFDWIIITSPEAGLVFLQAWKDAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180

Query: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240
           AIGKVLASELPKLGNTKCSVLYPASTKASNDIEE LSNRGFEVMRLNTYTT+PVDYVDQF
Sbjct: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTSPVDYVDQF 240

Query: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300
           ILEQARSLPVVTVASPSAI AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN
Sbjct: 241 ILEQARSLPVVTVASPSAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300

Query: 301 PGLEGWVDSILEALRSEAQVV 321
           PGLEGWVDSILEALRSEAQVV
Sbjct: 301 PGLEGWVDSILEALRSEAQVV 320

[Close]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL
Match: A0A6J1KA58 (Uroporphyrinogen-III synthase OS=Cucurbita maxima OX=3661 GN=LOC111492039 PE=3 SV=1)

HSP 1 Score: 596 bits (1536), Expect = 2.45e-214
Identity = 315/321 (98.13%), Postives = 315/321 (98.13%), Query Frame = 0


Query: 1   MSTSGAVSVCSSPPLPMAPVSLSSFSQTPSVVSSPCLLQLYRRILLPRRTLACFSSTLTS 60
           MSTSGAVSV SSP LPMAPVSLSSFS TPSVV SPCLLQLYRRILLPRRTLACFSSTLTS
Sbjct: 1   MSTSGAVSVFSSP-LPMAPVSLSSFSHTPSVVPSPCLLQLYRRILLPRRTLACFSSTLTS 60

Query: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120
           SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD
Sbjct: 61  SASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSD 120

Query: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180
           SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK
Sbjct: 121 SVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSK 180

Query: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQF 240
           AIGKVLASELPKLGNTKCSVLYPASTKASNDIEE LSNRGFEVMRLNTYTTAPVDYVDQF
Sbjct: 181 AIGKVLASELPKLGNTKCSVLYPASTKASNDIEEGLSNRGFEVMRLNTYTTAPVDYVDQF 240

Query: 241 ILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300
           ILEQARSLPVVTVASPSAI AWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN
Sbjct: 241 ILEQARSLPVVTVASPSAIRAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKN 300

Query: 301 PGLEGWVDSILEALRSEAQVV 321
           PGLEGWVDSILEALRSEAQVV
Sbjct: 301 PGLEGWVDSILEALRSEAQVV 320

[Close]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL
Match: A0A0A0LLB2 (Uroporphyrinogen-III synthase OS=Cucumis sativus OX=3659 GN=Csa_2G360600 PE=3 SV=1)

HSP 1 Score: 526 bits (1356), Expect = 4.68e-187
Identity = 278/307 (90.55%), Postives = 288/307 (93.81%), Query Frame = 0


Query: 17  MAPVSLSSFSQTPSVV-SSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSS-ISAPKV 76
           MA VSLSSFS  PSVV  SPCL Q Y RILLPRRTLAC SST  SS+SITSSS ISAPKV
Sbjct: 1   MASVSLSSFSHPPSVVVPSPCL-QFYGRILLPRRTLACSSSTSVSSSSITSSSSISAPKV 60

Query: 77  VVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEAG 136
           VVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRLHSVLSDSVFDWI+ITSPEAG
Sbjct: 61  VVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLHSVLSDSVFDWIVITSPEAG 120

Query: 137 LVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSKAIGKVLASELPKLG 196
           LVFL+AWKAAGMPKVRIGVVGAGTANIF+EVLQSS LLEVAFAPSKAIGKVLASELPKLG
Sbjct: 121 LVFLEAWKAAGMPKVRIGVVGAGTANIFEEVLQSSKLLEVAFAPSKAIGKVLASELPKLG 180

Query: 197 NTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVVTVA 256
           NTKCSVLYPASTKASNDIEE LSNRGFEV RLNTYTTAPVDYVDQ ILEQARSLPVVTVA
Sbjct: 181 NTKCSVLYPASTKASNDIEECLSNRGFEVTRLNTYTTAPVDYVDQTILEQARSLPVVTVA 240

Query: 257 SPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEAL 316
           SPSA+ AWVNLIS+PKEW+KSLACIGETTAAAA RLGLKN+YYPKNPGLEGWVDSILEAL
Sbjct: 241 SPSAVRAWVNLISDPKEWDKSLACIGETTAAAANRLGLKNVYYPKNPGLEGWVDSILEAL 300

Query: 317 RSEAQVV 321
           RSEAQVV
Sbjct: 301 RSEAQVV 306

[Close]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL
Match: A0A1S3BBN0 (Uroporphyrinogen-III synthase OS=Cucumis melo OX=3656 GN=LOC103487917 PE=3 SV=1)

HSP 1 Score: 516 bits (1329), Expect = 6.28e-183
Identity = 272/308 (88.31%), Postives = 285/308 (92.53%), Query Frame = 0


Query: 17  MAPVSLSSFSQTPSVV-SSPCLLQLYRRILLPRRTLACFSSTL--TSSASITSSSISAPK 76
           MA VSLSSFS  PSVV  SPCL Q YRRILLPRRTLAC SS    +SS+SITS SISAPK
Sbjct: 1   MASVSLSSFSHPPSVVVPSPCL-QFYRRILLPRRTLACSSSAWISSSSSSITSMSISAPK 60

Query: 77  VVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPEA 136
           VVVTRERGKNGKL++ALARHGINCLELPLIQH QGPDLNRL SVLSD+VFDWI+ITSPEA
Sbjct: 61  VVVTRERGKNGKLVNALARHGINCLELPLIQHRQGPDLNRLQSVLSDTVFDWIVITSPEA 120

Query: 137 GLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSNLLEVAFAPSKAIGKVLASELPKL 196
           GLVFL+AWKAAGMPKVRIGVVGAGTANIF+EVLQSS LLEVAFAPSKAIGKVLASELPKL
Sbjct: 121 GLVFLEAWKAAGMPKVRIGVVGAGTANIFEEVLQSSKLLEVAFAPSKAIGKVLASELPKL 180

Query: 197 GNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVVTV 256
           GNTKCSVLYPASTKASNDIEE LSNRGFEV RLNTYTTAPVDYVDQ I EQARSLPVVTV
Sbjct: 181 GNTKCSVLYPASTKASNDIEECLSNRGFEVTRLNTYTTAPVDYVDQTIHEQARSLPVVTV 240

Query: 257 ASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSILEA 316
           ASPSA+ AWVNLI +PKEW+KSLACIGETTAAAA RLGLKN+YYPKNPGLEGWVDSILEA
Sbjct: 241 ASPSAVRAWVNLIPDPKEWDKSLACIGETTAAAANRLGLKNVYYPKNPGLEGWVDSILEA 300

Query: 317 LRSEAQVV 321
           LRSEAQ+V
Sbjct: 301 LRSEAQIV 307

[Close]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL
Match: A0A6J1CQT7 (Uroporphyrinogen-III synthase OS=Momordica charantia OX=3673 GN=LOC111013898 PE=3 SV=1)

HSP 1 Score: 501 bits (1291), Expect = 3.09e-177
Identity = 267/310 (86.13%), Postives = 283/310 (91.29%), Query Frame = 0


Query: 17  MAPVSLSSFSQT---PSVV-SSPCLLQLYRRILLPRRTLACFSSTLTSSASITSSSISAP 76
           MAPVSLSS S     PSVV  SPCL QL RRILLPRRT +C SS   +S   TSSSISAP
Sbjct: 1   MAPVSLSSLSSLSHPPSVVVPSPCL-QLCRRILLPRRTPSCSSS---ASIPTTSSSISAP 60

Query: 77  KVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRLHSVLSDSVFDWIIITSPE 136
           KVVVTRERGKNGKL++ALA+HGINCLELPLIQH QGPDLNRLHSVL DSVFDWI+ITSPE
Sbjct: 61  KVVVTRERGKNGKLVNALAKHGINCLELPLIQHRQGPDLNRLHSVLGDSVFDWIVITSPE 120

Query: 137 AGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSN-LLEVAFAPSKAIGKVLASELP 196
           AGLVFL+AWKAAGMPKVRIGVVGAGTANIF++VLQSSN LL+VAFAPSKAIGKVLASELP
Sbjct: 121 AGLVFLEAWKAAGMPKVRIGVVGAGTANIFEDVLQSSNQLLDVAFAPSKAIGKVLASELP 180

Query: 197 KLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAPVDYVDQFILEQARSLPVV 256
           KLG+TKC VLYPASTKASNDIEE LSNRGFEVMRLNTYTTAPVDYVDQ +LEQARSLPVV
Sbjct: 181 KLGDTKCRVLYPASTKASNDIEEALSNRGFEVMRLNTYTTAPVDYVDQTVLEQARSLPVV 240

Query: 257 TVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLKNIYYPKNPGLEGWVDSIL 316
           TVASPSA+ AWVNLISEP EWEKSLACIGETTAAAA+R GLKN+YYPKNPGLEGWVDSIL
Sbjct: 241 TVASPSAVRAWVNLISEPNEWEKSLACIGETTAAAAERFGLKNVYYPKNPGLEGWVDSIL 300

Query: 317 EALRSEAQVV 321
           EALR+EAQVV
Sbjct: 301 EALRTEAQVV 306

[Close]

BLAST of Cp4.1LG11g01660 vs. TAIR 10
Match: AT2G26540.1 (uroporphyrinogen-III synthase family protein )

HSP 1 Score: 345.5 bits (885), Expect = 4.6e-95
Identity = 173/265 (65.28%), Postives = 216/265 (81.51%), Query Frame = 0


Query: 55  SSTLTSSASITSSSISAPKVVVTRERGKNGKLIDALARHGINCLELPLIQHSQGPDLNRL 114
           SS+++SS+S  SSS S P+VVVTRERGKN ++I AL ++GI+ LELPLIQH++GPD +RL
Sbjct: 48  SSSVSSSSSSVSSSNSIPQVVVTRERGKNNQIIKALEKNGISSLELPLIQHARGPDFDRL 107

Query: 115 HSVLSDSVFDWIIITSPEAGLVFLQAWKAAGMPKVRIGVVGAGTANIFDEVLQSSN-LLE 174
            SVL+D  FDWIIITSPEAG VFL+AWK A  P+V+IGVVGAGTA +F+E ++S++ LL 
Sbjct: 108 ASVLNDKSFDWIIITSPEAGSVFLEAWKTASSPEVQIGVVGAGTARVFEEAMKSADGLLH 167

Query: 175 VAFAPSKAIGKVLASELPKLGNTKCSVLYPASTKASNDIEEVLSNRGFEVMRLNTYTTAP 234
           VAF PSKA GKVLASELP+    + SVLYPAS KA NDI E LS RGFEV+RLNTYTT P
Sbjct: 168 VAFTPSKATGKVLASELPEKVGKRSSVLYPASLKAGNDIVEGLSKRGFEVVRLNTYTTVP 227

Query: 235 VDYVDQFILEQARSLPVVTVASPSAIHAWVNLISEPKEWEKSLACIGETTAAAAKRLGLK 294
           V  VD  +L+QA S PV++VASPSA+ AW++LI   ++W   +ACIGETTA+AA+RLGLK
Sbjct: 228 VQSVDTVLLQQALSAPVLSVASPSAVRAWLHLIQNEEQWSNYVACIGETTASAARRLGLK 287

Query: 295 NIYYPKNPGLEGWVDSILEALRSEA 319
           N+YYP+ PGLEGWV+SI+EAL + A
Sbjct: 288 NVYYPEKPGLEGWVESIMEALGAHA 312

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g01660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48721	6.4e-94	65.28	Uroporphyrinogen-III synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q10QR9	4.8e-89	64.59	Uroporphyrinogen-III synthase, chloroplastic OS=Oryza sativa subsp. japonica OX=...	[more]

BLAST of Cp4.1LG11g01660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023547155.1	3.09e-222	100.00	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962039.1	2.50e-214	97.82	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita moschata] >XP_02296...	[more]
XP_022996969.1	5.05e-214	98.13	uroporphyrinogen-III synthase, chloroplastic-like [Cucurbita maxima]	[more]
KAG6598391.1	9.92e-206	97.70	Uroporphyrinogen-III synthase, chloroplastic, partial [Cucurbita argyrosperma su...	[more]
XP_038885202.1	9.74e-188	90.58	uroporphyrinogen-III synthase, chloroplastic [Benincasa hispida]	[more]

BLAST of Cp4.1LG11g01660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HDZ7	1.21e-214	97.82	Uroporphyrinogen-III synthase OS=Cucurbita moschata OX=3662 GN=LOC111462623 PE=3...	[more]
A0A6J1KA58	2.45e-214	98.13	Uroporphyrinogen-III synthase OS=Cucurbita maxima OX=3661 GN=LOC111492039 PE=3 S...	[more]
A0A0A0LLB2	4.68e-187	90.55	Uroporphyrinogen-III synthase OS=Cucumis sativus OX=3659 GN=Csa_2G360600 PE=3 SV...	[more]
A0A1S3BBN0	6.28e-183	88.31	Uroporphyrinogen-III synthase OS=Cucumis melo OX=3656 GN=LOC103487917 PE=3 SV=1	[more]
A0A6J1CQT7	3.09e-177	86.13	Uroporphyrinogen-III synthase OS=Momordica charantia OX=3673 GN=LOC111013898 PE=...	[more]

BLAST of Cp4.1LG11g01660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G26540.1	4.6e-95	65.28	uroporphyrinogen-III synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	GENE3D	3.40.50.10090		coord: 118..223 e-value: 4.5E-18 score: 67.3
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	GENE3D	3.40.50.10090		coord: 224..315 e-value: 4.8E-9 score: 38.0
IPR036108	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily	SUPERFAMILY	69618	HemD-like	coord: 72..313
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	PFAM	PF02602	HEM4	coord: 86..307 e-value: 1.1E-44 score: 152.6
IPR003754	Tetrapyrrole biosynthesis, uroporphyrinogen III synthase	CDD	cd06578	HemD	coord: 74..310 e-value: 3.64387E-45 score: 152.076
IPR039793	Uroporphyrinogen-III synthase	PANTHER	PTHR38042	UROPORPHYRINOGEN-III SYNTHASE, CHLOROPLASTIC	coord: 28..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g01660.1	Cp4.1LG11g01660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006782	protoporphyrinogen IX biosynthetic process
biological_process	GO:0006780	uroporphyrinogen III biosynthetic process
biological_process	GO:0033014	tetrapyrrole biosynthetic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0004852	uroporphyrinogen-III synthase activity