Cp4.1LG11g01450 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g01450
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Descriptionzinc transporter 7-like
LocationCp4.1LG11: 881082 .. 881537 (+)
RNA-Seq ExpressionCp4.1LG11g01450
SyntenyCp4.1LG11g01450
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGCCGTTCAGTGGATAACCTCCGATGCAGGGATGACCTGATGAACGTATACAGAGCCAATGCTCACATGTCAAGAAGAGGCAGCGTTAAGATCAGGGACATCATCGGAATTATTAAAATCCTCGGACCCGTCATCCCCCACTTCTTTCAGAGGCGTAACGCCGCCAACAACTTTAATACTTGTGGCAGCATGGGTTATGCTCGTGACCAGGATGACATGGGTTCCCGCTTTGGGTTTGGTATGGCTTCTGGTGATTATGGCAATGGTAGCGGCCACTATGGCCACAGCCATGGTCATGGTCATGGTCATGGGCATTCCCATTCCCATGGTGAATCTCACTACGGGATGAGTATGGGTCATGTTGATGACTATGCTGATCACGAAATTACGGAGGAGGAGTTTGAGAGGCTCCTTGACTACGCGGAGCAGTGCAATGTGAAGATGTACTGA

mRNA sequence

ATGGCTTGCCGTTCAGTGGATAACCTCCGATGCAGGGATGACCTGATGAACGTATACAGAGCCAATGCTCACATGTCAAGAAGAGGCAGCGTTAAGATCAGGGACATCATCGGAATTATTAAAATCCTCGGACCCGTCATCCCCCACTTCTTTCAGAGGCGTAACGCCGCCAACAACTTTAATACTTGTGGCAGCATGGGTTATGCTCGTGACCAGGATGACATGGGTTCCCGCTTTGGGTTTGGTATGGCTTCTGGTGATTATGGCAATGGTAGCGGCCACTATGGCCACAGCCATGGTCATGGTCATGGTCATGGGCATTCCCATTCCCATGGTGAATCTCACTACGGGATGAGTATGGGTCATGTTGATGACTATGCTGATCACGAAATTACGGAGGAGGAGTTTGAGAGGCTCCTTGACTACGCGGAGCAGTGCAATGTGAAGATGTACTGA

Coding sequence (CDS)

ATGGCTTGCCGTTCAGTGGATAACCTCCGATGCAGGGATGACCTGATGAACGTATACAGAGCCAATGCTCACATGTCAAGAAGAGGCAGCGTTAAGATCAGGGACATCATCGGAATTATTAAAATCCTCGGACCCGTCATCCCCCACTTCTTTCAGAGGCGTAACGCCGCCAACAACTTTAATACTTGTGGCAGCATGGGTTATGCTCGTGACCAGGATGACATGGGTTCCCGCTTTGGGTTTGGTATGGCTTCTGGTGATTATGGCAATGGTAGCGGCCACTATGGCCACAGCCATGGTCATGGTCATGGTCATGGGCATTCCCATTCCCATGGTGAATCTCACTACGGGATGAGTATGGGTCATGTTGATGACTATGCTGATCACGAAATTACGGAGGAGGAGTTTGAGAGGCTCCTTGACTACGCGGAGCAGTGCAATGTGAAGATGTACTGA

Protein sequence

MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAANNFNTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSMGHVDDYADHEITEEEFERLLDYAEQCNVKMY
Homology
BLAST of Cp4.1LG11g01450 vs. NCBI nr
Match: XP_023545419.1 (zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.1 zinc transporter 7-A-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 272 bits (695), Expect = 1.89e-91
Identity = 133/151 (88.08%), Postives = 142/151 (94.04%), Query Frame = 0

Query: 1   MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAANNF 60
           MACRSVDNLRCRDDLMNVYRANA  SRRG VKIRDII II+ILGP+IP FFQ+   ANNF
Sbjct: 1   MACRSVDNLRCRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKHGGANNF 60

Query: 61  NTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM 120
           ++CGSMGYARDQDDMGSR GFGM+SGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM
Sbjct: 61  SSCGSMGYARDQDDMGSRCGFGMSSGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM 120

Query: 121 GHVDDYADHEITEEEFERLLDYAEQCNVKMY 151
           GHVDDYADHEI+EEEFE+LLDYAEQCNV+MY
Sbjct: 121 GHVDDYADHEISEEEFEKLLDYAEQCNVRMY 151

BLAST of Cp4.1LG11g01450 vs. NCBI nr
Match: XP_022962401.1 (zinc transporter 7-like [Cucurbita moschata])

HSP 1 Score: 263 bits (672), Expect = 5.29e-88
Identity = 130/151 (86.09%), Postives = 140/151 (92.72%), Query Frame = 0

Query: 1   MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAANNF 60
           MACRSVDNLRCRDDLMNVYRANA  SRRG VKIRDII II+ILGP+IPHFF++   ANNF
Sbjct: 1   MACRSVDNLRCRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKHGGANNF 60

Query: 61  NTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM 120
           ++CGSMGYARDQDDMGSRFGFGMASG+YGNGSGHYGHSHGHGH    SHSHGESHYGMSM
Sbjct: 61  SSCGSMGYARDQDDMGSRFGFGMASGEYGNGSGHYGHSHGHGH----SHSHGESHYGMSM 120

Query: 121 GHVDDYADHEITEEEFERLLDYAEQCNVKMY 151
           GHVDDYADHEI+EEEFE+LLDYAEQCNV+MY
Sbjct: 121 GHVDDYADHEISEEEFEKLLDYAEQCNVRMY 147

BLAST of Cp4.1LG11g01450 vs. NCBI nr
Match: KAG6598377.1 (hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261 bits (667), Expect = 3.06e-87
Identity = 130/151 (86.09%), Postives = 139/151 (92.05%), Query Frame = 0

Query: 1   MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAANNF 60
           MACRSVDNLRCRDDLMNVYRANA  SRRG VKIRDII II+ILGP+IP FFQ+   ANNF
Sbjct: 1   MACRSVDNLRCRDDLMNVYRANARRSRRGRVKIRDIIEIIEILGPIIPPFFQKHGGANNF 60

Query: 61  NTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM 120
           ++CGSMGYARDQDDMGSRFGFGMASG+YGNGSGHYGHSHGHGH    SHSHGESHYGMSM
Sbjct: 61  SSCGSMGYARDQDDMGSRFGFGMASGEYGNGSGHYGHSHGHGH----SHSHGESHYGMSM 120

Query: 121 GHVDDYADHEITEEEFERLLDYAEQCNVKMY 151
           GHVDDYADHEI+EEEFE+LLDYAEQCNV+MY
Sbjct: 121 GHVDDYADHEISEEEFEKLLDYAEQCNVRMY 147

BLAST of Cp4.1LG11g01450 vs. NCBI nr
Match: KAG6598378.1 (hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189 bits (479), Expect = 1.47e-58
Identity = 108/165 (65.45%), Postives = 115/165 (69.70%), Query Frame = 0

Query: 1   MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAAN-- 60
           MACRSVDNLRCRDDLMNVYRANAH SRRGSVKIRDIIGIIKILGPV+PHFF+RRN AN  
Sbjct: 1   MACRSVDNLRCRDDLMNVYRANAHRSRRGSVKIRDIIGIIKILGPVVPHFFERRNGANVT 60

Query: 61  ------------NFNTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHG 120
                             ++G       M +     MA+               HGHGHG
Sbjct: 61  LVVVAAWVMLVTRMTWVPALGLVWLLVIM-AMVAATMATA--------------HGHGHG 120

Query: 121 HSHSHGESHYGMSMGHVDDYADHEITEEEFERLLDYAEQCNVKMY 151
           HSHSHGESHYGMSMGHVDDYADHEI+EEEFERLLDYAEQCNVKMY
Sbjct: 121 HSHSHGESHYGMSMGHVDDYADHEISEEEFERLLDYAEQCNVKMY 150

BLAST of Cp4.1LG11g01450 vs. NCBI nr
Match: KGN62520.1 (hypothetical protein Csa_022281 [Cucumis sativus])

HSP 1 Score: 114 bits (284), Expect = 7.54e-29
Identity = 77/171 (45.03%), Postives = 97/171 (56.73%), Query Frame = 0

Query: 1   MACRSVDNLRC-RDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAA-- 60
           MA RSV+NL+  +DD+   YR     SRR  +KIRDII +++I+GP+IPHFF   + +  
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  -NNFNTCGSM----GYARDQDDM---------GSRFGFGMASGDYGNGSGHYGHSHGHGH 120
            +N++  G+      Y R  DDM         G RFG  M SGDYGN S HYG       
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYG------- 120

Query: 121 GHGHSHSHGESHYGMSMGHVDDYADHEITEEEFERLLDYAEQC---NVKMY 151
                  +G S YGM M   +DY D EITEEEFERLLD+AEQ    N +MY
Sbjct: 121 ----GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160

BLAST of Cp4.1LG11g01450 vs. ExPASy TrEMBL
Match: A0A6J1HD14 (zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1)

HSP 1 Score: 263 bits (672), Expect = 2.56e-88
Identity = 130/151 (86.09%), Postives = 140/151 (92.72%), Query Frame = 0

Query: 1   MACRSVDNLRCRDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAANNF 60
           MACRSVDNLRCRDDLMNVYRANA  SRRG VKIRDII II+ILGP+IPHFF++   ANNF
Sbjct: 1   MACRSVDNLRCRDDLMNVYRANASRSRRGRVKIRDIIEIIEILGPIIPHFFKKHGGANNF 60

Query: 61  NTCGSMGYARDQDDMGSRFGFGMASGDYGNGSGHYGHSHGHGHGHGHSHSHGESHYGMSM 120
           ++CGSMGYARDQDDMGSRFGFGMASG+YGNGSGHYGHSHGHGH    SHSHGESHYGMSM
Sbjct: 61  SSCGSMGYARDQDDMGSRFGFGMASGEYGNGSGHYGHSHGHGH----SHSHGESHYGMSM 120

Query: 121 GHVDDYADHEITEEEFERLLDYAEQCNVKMY 151
           GHVDDYADHEI+EEEFE+LLDYAEQCNV+MY
Sbjct: 121 GHVDDYADHEISEEEFEKLLDYAEQCNVRMY 147

BLAST of Cp4.1LG11g01450 vs. ExPASy TrEMBL
Match: A0A0A0LKW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1)

HSP 1 Score: 114 bits (284), Expect = 3.65e-29
Identity = 77/171 (45.03%), Postives = 97/171 (56.73%), Query Frame = 0

Query: 1   MACRSVDNLRC-RDDLMNVYRANAHMSRRGSVKIRDIIGIIKILGPVIPHFFQRRNAA-- 60
           MA RSV+NL+  +DD+   YR     SRR  +KIRDII +++I+GP+IPHFF   + +  
Sbjct: 1   MAFRSVNNLQFWKDDMRRAYREKVGSSRRRRIKIRDIIDVLEIVGPIIPHFFGSNSLSAG 60

Query: 61  -NNFNTCGSM----GYARDQDDM---------GSRFGFGMASGDYGNGSGHYGHSHGHGH 120
            +N++  G+      Y R  DDM         G RFG  M SGDYGN S HYG       
Sbjct: 61  PDNYSNYGNNHMNGSYGRRDDDMHSFHCGGGGGGRFGLDMGSGDYGNESRHYG------- 120

Query: 121 GHGHSHSHGESHYGMSMGHVDDYADHEITEEEFERLLDYAEQC---NVKMY 151
                  +G S YGM M   +DY D EITEEEFERLLD+AEQ    N +MY
Sbjct: 121 ----GRGNGNSQYGMRMALAEDYYDREITEEEFERLLDFAEQSHNNNSRMY 160

BLAST of Cp4.1LG11g01450 vs. ExPASy TrEMBL
Match: A0A6A3BC64 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110236pilonHSYRG00066 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.24e-05
Identity = 36/74 (48.65%), Postives = 45/74 (60.81%), Query Frame = 0

Query: 78  RFGFGMASGD-YGNGSGH-YGHSHGHGHGHGHSHSHGESH---YGMSMGHVDDYADHEIT 137
           ++G G A GD +G+G GH +GH HGHGHGHGH H HG  H   +G   GH DD+ DH+  
Sbjct: 36  KYGQGDAHGDGHGHGHGHGHGHGHGHGHGHGHGHGHGHGHGNGHGHGHGHGDDHGDHKGG 95

Query: 138 EEEFERLLDYAEQC 146
            EE  R L + E  
Sbjct: 96  SEEHHRRLLFYEDA 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_023545419.11.89e-9188.08zinc transporter 7-A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545420.... [more]
XP_022962401.15.29e-8886.09zinc transporter 7-like [Cucurbita moschata][more]
KAG6598377.13.06e-8786.09hypothetical protein SDJN03_08155, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6598378.11.47e-5865.45hypothetical protein SDJN03_08156, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN62520.17.54e-2945.03hypothetical protein Csa_022281 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A6J1HD142.56e-8886.09zinc transporter 7-like OS=Cucurbita moschata OX=3662 GN=LOC111462856 PE=4 SV=1[more]
A0A0A0LKW73.65e-2945.03Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G359890 PE=4 SV=1[more]
A0A6A3BC641.24e-0548.65FKBP-like peptidyl-prolyl cis-trans isomerase family protein isoform 1 OS=Hibisc... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 94..119

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g01450.1Cp4.1LG11g01450.1mRNA