Cp4.1LG11g00760 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG11g00760
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionThioredoxin-like fold
LocationCp4.1LG11: 47596 .. 52061 (+)
RNA-Seq ExpressionCp4.1LG11g00760
SyntenyCp4.1LG11g00760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCCACAAACCATTTCAGCTTAATCTTTGACGAAATGGGGACTTCAAAAAATGTACAACCGATAAGCCGACTAGTCTGAATCGGTTCGATTTCTTCCGTTATGAGACCCAACCGATCGGTTGGACCTAAAATCGAATCGAGCCGAACAAATATACACCCCTACTTCACTCGGTCCTCTCTCGTTTCTCTTCTTTTTCCTCTCGGTCCCTCTCTCGCCTCTCAGAGTCACAAGTGGGTTTCTTATCGCGCCAAATCCTCCATCCAGAAGCTCGCCTCGAAATATTGTCTCACGGCCACTCGCCATAACCATAGTTCCAGCAAACCTTCCCACTGCACGTCCTTATGTAATTCCGTGATTGAAGGTTGATAGTTATCCTTTTTTCCCCTTTTAATTTTATGGTTTGTCGGCTTCTATAGTTTAATTTGGATGTGTGCTTTAGTTTGTTTGTTTTCCTCTACTTTTCATACTCTGCTAATGGTTTGATCTGCGAGATTTCACCAGTGATAAATGCATTTATGTTGATATTTGTAGGACACTGAGAAGTTGATTGTTTGCACGATTTGATCAGATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAGTATGTGATGTTGTTGTTATTATCTTTTTTCGGGGCAAGGAATTGGGAAGTCTGACCCCTGATATCAGCAATATGATTGAATAAGCACTCTGTGGACTTTGCAGCTCTTCATTTTTGCTCTTTTAGCAGTAGTTGTTTCTATGATTATGACACGCGAAATTTACTTCCTACTAGAATGGATGTGACCCCATTTTCATCTGCATCCAATCAATCCCTTCAAATAATCTATTTTCACTCCACTGTTGATCTCTTCCTTGATCATCTTGCTGTTATGCTTTCTATGAGGCGGCACCATGTTACTAACCTGCCATTTTCCGCCCAGGCAATCCATCTCATTGTGATTGCTCAAGCTGATAGTTTACCTTAAATTTAATTGTATCAATACTTCAACACTCTCCCTTCCTTGCTTGTGAGCTCGAAAAATTGTAAAAAACTCAACAAGTGGAAATTGATATTAATTGGGGTGAAAATAAGATTACAAAGGTTTGAATACATGACCTCTTGCTCTGAAATCATGTTAAATCACCAATAAACCCAAAAGCTTAAGCGGATAGGTTGTGGTAAATTTACTAATATCAATAACTCAACTGTCATAAGAACAATTTCTAGTTGCCTTCAAACATCTAATCCACCTCTCATCTGATGTTGTGAACTAACCTCATATCCATCTAGGCAGAGGAAAATGGAAAGAGGGGCCCTTTTAGTTCTCCTTAGATTAAAATGGAACTGTTAACATTTTGGGTTTCCACCCCTTCCGAACCCTCTAATCCAGGAAAGTCTTATATTTATTTTGGGTTCCCCTTAACAATCACTTTATTATATTTGAGAAGTTGAACTATGAGTTACTCTCTCTCTTATATTTATTTATGTTAAGCTTGGATCATTTCATCTATTAGTTTCTGTTGTTGGATGAGGATATTTGGAGTTCCATGTCCATGTTCCGTGAAGATAAGCATTTTTGTTCATTTTAGGCAAGAGCCGATTTTCTGAGTTGTATTTAGCATTATAATGGTCAAAGGTACATGATTAGGATAAACTTTTCTTCCAGAATGCATTCTACTTTTGTGAGATACGACTCTTTGTAGTCTGTTTTTTTTTTCTTCACAATTTTGCTTATTCCACATCCCTCTACTTGTTATAGATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGGTACATGAATACTGTTCGTATTAGCACCTTCCTTTTGTTCTCTAGGTTAAATGCTCATGTTTAATTCTATAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGTAAGTCATTTTCTTATGATAGGAGTACCCGACGTGCCATGATTTATTGACGTTTTTCTTTTCTTATCTTTTGACAGCTTCATTTCTTCTGAAGTCTAACTGAGTTATAGAACTTTTACAATGGTTTGTTTGATTTATTTTTATTTTTCTTATTATTTAATCACATTTGTCATCCTTTGCATCATTTTTTTTTTTGCCACCTATTTATTTTACTTTATTTCAGAGATTAAAATAGTAATAAAAAAACATTGCATTCTGTTTTTATTGACTTACATGTCTCTTGAGCATGCTTATATGTCTGGGGGTACGTCTCAAACTCCGCTTCCTCTAATTGATGCCCCATCTGTATTGAAATGTTTCTGCCTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATGTTATTCGAAAATATATAGAATGACTTGTTAATGTTAATCTTATTGTGCATATCGAAATCACCATGCACAAATTTATGATTTCTCATTACAAGGTATCCATATAAGTTCCTTGATCTTCTTTAAGCCGTTTTCTTATGTTTCTTGTCATTTTTTTTTTATGAAAATGTTCCTTAAGCCGTTTTCTTAATTTCATTGTAACGGTCATTTTATCATTGTGCCTCTGTGATCCATGGATTTAGTCAATAGTTTGAAACAATAGACAACATCATAATATGCCACTGCATTTTTTGTGTTTACTTTCTTGTGACTTCGATCTCACGTTTAAACTTCAGGTTGAGTGCCCAAAGTATCCTGGTTTCTGCATTTCACGGCAGAGAAAGGAATATCCATTTATCGAGATGTTTCATAGCCCACAACAAGTAGGACTGCCCATCTGATTGTGTTTTGTCTTAGTTTGATTTCCAGTGTAACCGTATATGATTTTGTTTCCAATTCTTGATTAATGGGAAAATAAGCTCTTTCTTGAATAATGTGTGCTTACTTTTGTCAATGCTGTATACAATTTATCTTGAACTTTAGTTGGCCATAAAATGTGATAATGCATTTTTTTTAATATGAAACAGACAGAAGTAAATTCGTATTGACAAAAGATAACAGCTTAAGGGAAAGGGCTATGCTGCGATGGTGGCTTCTAGCTCTGTGGTCTCTATAGAACTTTCTTCACATGTTTGTATCCAGAACAAGTGGCTTTAATCCAACATTATTGTGCTTGCATTTCATTTCTTGCAAGCACAGCGAACCAACAGATAATGGAACCATTAATGAACATTGCTGCTTTAATGCTCAAGAAAATATTGACTATTTTTTTTTATTTAGAAGATGGATTTGTTCCATTTTACGTTGTTTTTACATTTAGAAACATTGTATTGTAAACAACAAGCTGATGAGAGATACGGTCTTAAATGGAAGCTAGGCAAACTCTATCAATACTGCCGTAAAATAGTACTTATCTATATGCTAAAAGAAAATGTGTATACCTTACCGTTTTCATTCTCAGTCCATTTATTAATGATTTGAATTCAATATTTTTTGTGCAGGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCGTAAGTTTTCATGCTCTGTTAACCTAAGTATACTCAATTTATCAATTCATTTCTCATTGCTGATGCTTTCACGTATGGTCATTGTCCATTTTCCACAGCATCTCCCCTTCTTACATCCCATCCCAGCAACACTAAAAGAAGTTTATGTAACGAACTTAACATTTGATTTGGATGTCCTGTTTTTTCACCTGATTTTATTAACATTATTTACCATTGAACATATGGTATTTTAAAATGATTGGCTGGCTTTTAAACCAAATAAGGCCTAATGAAGTTTTCTCTGCTGGAAAATATTGAAGTTCTCAATTCCGCAAGCTAAGCTTCTAATAGTAAACGGGATCCTTCACTGACCTATGTTTCTGTTTCATTGATTTGTTTATTTTCTTTTATCCAGTTCAACTATGACCCCAGTGCCTATGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGAATCAAAAGTAATACACGGTCAAGAGCGCAAAGCCTTTGTAACTTATCTGTGATTTTGAACTGGTTTGTGCCGTACATGATGGATACAAACTCCATAGATGTTTAATCTTTATGCCCACATGAAAAGTAGACTCATACAAGATACTTCCTGGTTTTCACCCTCGAGTTTGTATAACTAGGTTCGCAGGAAAGTTAGCCGTATATCCTCTATGTGGTAATATTGATATCTAATTTCTTTCCAAGGGGCCATCTTCAGAACATTTCATTTGCCTCTCTTCAGTATGAAATTATTTATTTGAAGTCAGTGGATTGTGACTCAGGTTCGAGGCCTTTTAGTACATGTTTCTTAGTTATGTAATTGTTTACTTTGGCTAGAAGAATATATAAAATAT

mRNA sequence

GATCCACAAACCATTTCAGCTTAATCTTTGACGAAATGGGGACTTCAAAAAATGTACAACCGATAAGCCGACTAGTCTGAATCGGTTCGATTTCTTCCGTTATGAGACCCAACCGATCGGTTGGACCTAAAATCGAATCGAGCCGAACAAATATACACCCCTACTTCACTCGGTCCTCTCTCGTTTCTCTTCTTTTTCCTCTCGGTCCCTCTCTCGCCTCTCAGAGTCACAAGTGGGTTTCTTATCGCGCCAAATCCTCCATCCAGAAGCTCGCCTCGAAATATTGTCTCACGGCCACTCGCCATAACCATAGTTCCAGCAAACCTTCCCACTGCACGTCCTTATGTAATTCCGTGATTGAAGGACACTGAGAAGTTGATTGTTTGCACGATTTGATCAGATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTATGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGAATCAAAAGTAATACACGGTCAAGAGCGCAAAGCCTTTGTAACTTATCTGTGATTTTGAACTGGTTTGTGCCGTACATGATGGATACAAACTCCATAGATGTTTAATCTTTATGCCCACATGAAAAGTAGACTCATACAAGATACTTCCTGGTTTTCACCCTCGAGTTTGTATAACTAGGTTCGCAGGAAAGTTAGCCGTATATCCTCTATGTGGTAATATTGATATCTAATTTCTTTCCAAGGGGCCATCTTCAGAACATTTCATTTGCCTCTCTTCAGTATGAAATTATTTATTTGAAGTCAGTGGATTGTGACTCAGGTTCGAGGCCTTTTAGTACATGTTTCTTAGTTATGTAATTGTTTACTTTGGCTAGAAGAATATATAAAATAT

Coding sequence (CDS)

ATGGGAGACCCAACAATTTTGGATAGAATGCTTATTCACCTTCGTGCGACATGCAAATACTATACTGGTTTCCCAAAAGATCTTGGGCCTTCAAGGGTCATACATTTTACATCTGAACGTGAGTTTGTCCAGCTCCTTCATGAAGGTTATCCAGTCGTTGTTGCTTTTACAGTCAGAGGTAATTACACAAAGCATCTTGACAAAGTATTGGAGGAAGCTGCGGTTGAGTTTTATCCGACTGTGAAATTTATGCGTGCATCTAGCCAGGGAAAGATTTCTGATCCTAACATTACGAAGTACTCGGTGAAGGTTCTACCCTTCAACTATGACCCCAGTGCCTATGGATTCAGAGAGTTTTTTAAGCGTCACGGGATATATGGTCGCTGA

Protein sequence

MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRGNYTKHLDKVLEEAAVEFYPTVKFMRASSQGKISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Homology
[Close]
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match: XP_038885442.1 (uncharacterized protein LOC120075825 isoform X3 [Benincasa hispida])

HSP 1 Score: 256 bits (654), Expect = 6.06e-86
Identity = 118/128 (92.19%), Postives = 124/128 (96.88%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LDR+L HLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTVLDRILSHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMRASSQGKISDPNITKYSVKVLPFNYDPSAYGFREFF 120
           NYTKHLDKVLEEAAVEFYP +KFMRAS+QGK+SD N+TKYSVKVLPFNYDPSAYG REFF
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNIKFMRASNQGKMSDSNVTKYSVKVLPFNYDPSAYGLREFF 120

Query: 121 KRHGIYGR 128
           KRHGIYGR
Sbjct: 121 KRHGIYGR 128

[Close]
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match: XP_022996547.1 (uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharacterized protein LOC111804696 [Cucurbita pepo subsp. pepo] >KAG7029196.1 hypothetical protein SDJN02_07533 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255 bits (652), Expect = 3.25e-85
Identity = 128/157 (81.53%), Postives = 128/157 (81.53%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMR                             ASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match: XP_022962537.1 (uncharacterized protein LOC111462937 [Cucurbita moschata])

HSP 1 Score: 251 bits (642), Expect = 1.09e-83
Identity = 126/157 (80.25%), Postives = 126/157 (80.25%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMR                             ASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match: KAG6598213.1 (Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 251 bits (641), Expect = 3.23e-82
Identity = 126/155 (81.29%), Postives = 126/155 (81.29%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMR                             ASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 126
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 155

[Close]
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match: XP_038885436.1 (uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885437.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885438.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885439.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_038885440.1 uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida])

HSP 1 Score: 241 bits (614), Expect = 2.02e-79
Identity = 118/157 (75.16%), Postives = 124/157 (78.98%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LDR+L HLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTVLDRILSHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYP +KFMR                             AS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNIKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           +SD N+TKYSVKVLPFNYDPSAYG REFFKRHGIYGR
Sbjct: 121 MSDSNVTKYSVKVLPFNYDPSAYGLREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match: A0A6J1K286 (uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762 PE=4 SV=1)

HSP 1 Score: 255 bits (652), Expect = 1.57e-85
Identity = 128/157 (81.53%), Postives = 128/157 (81.53%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMR                             ASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match: A0A6J1HCY2 (uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC111462937 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 5.26e-84
Identity = 126/157 (80.25%), Postives = 126/157 (80.25%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP  LDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGDPKFLDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYPTVKFMR                             ASSQGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPTVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR
Sbjct: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match: A0A1S3BIH6 (uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=4 SV=1)

HSP 1 Score: 233 bits (593), Expect = 1.55e-76
Identity = 114/157 (72.61%), Postives = 122/157 (77.71%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDPT+LD +L HLR+TCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFT+R 
Sbjct: 1   MGDPTVLDTILRHLRSTCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NY+KHLDKVLEEAAVEFYP VKFMR                             ASSQGK
Sbjct: 61  NYSKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPKQASSQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIYGR 128
           I+D N+TKYSVKV+PFNYD SAYGFREFFKRHGIYGR
Sbjct: 121 IADSNVTKYSVKVIPFNYDTSAYGFREFFKRHGIYGR 157

[Close]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match: A0A6J1BSI0 (uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005143 PE=4 SV=1)

HSP 1 Score: 232 bits (591), Expect = 3.46e-76
Identity = 115/155 (74.19%), Postives = 122/155 (78.71%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MG+PTI DRM+ HLRATCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG
Sbjct: 1   MGEPTIFDRMISHLRATCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAAVEFYP VKFMR                             AS+QGK
Sbjct: 61  NYTKHLDKVLEEAAVEFYPNVKFMRVECPKYPGFCISRQRKEYPFIEMFHSPQQASNQGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGIY 126
           I+DP+ITKYSVKVLPFNYD SAYGFREFFKRHGI+
Sbjct: 121 IADPSITKYSVKVLPFNYDLSAYGFREFFKRHGIW 155

[Close]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match: A0A2I4HB13 (uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 PE=4 SV=1)

HSP 1 Score: 222 bits (566), Expect = 2.23e-72
Identity = 107/154 (69.48%), Postives = 117/154 (75.97%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGDP+  DRM+  LR TCKYYTG+PKDLGPSRVIHFTSEREFVQLLHEG+PVVVAFT+RG
Sbjct: 1   MGDPSFFDRMICDLRTTCKYYTGYPKDLGPSRVIHFTSEREFVQLLHEGHPVVVAFTIRG 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYTKHLDKVLEEAA +FYP VKFMR                             AS+QG+
Sbjct: 61  NYTKHLDKVLEEAAAKFYPNVKFMRVECPKYPGFCITRQRTEYPFIEIFHSPEQASNQGR 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGI 125
            +DPN+TKYSVKVLPFNYDPSAYGFREFFKRHGI
Sbjct: 121 AADPNVTKYSVKVLPFNYDPSAYGFREFFKRHGI 154

[Close]
BLAST of Cp4.1LG11g00760 vs. TAIR 10
Match: AT5G57230.1 (Thioredoxin superfamily protein )

HSP 1 Score: 207.6 bits (527), Expect = 5.9e-54
Identity = 96/154 (62.34%), Postives = 114/154 (74.03%), Query Frame = 0 

Query: 1   MGDPTILDRMLIHLRATCKYYTGFPKDLGPSRVIHFTSEREFVQLLHEGYPVVVAFTVRG 60
           MGD T LDRML+ LR+TCKYY+G+PKDLGPSRV+HFTSEREFVQLLH+GYPVVVAFT+R 
Sbjct: 1   MGDSTFLDRMLLQLRSTCKYYSGYPKDLGPSRVLHFTSEREFVQLLHQGYPVVVAFTIRS 60

Query: 61  NYTKHLDKVLEEAAVEFYPTVKFMR-----------------------------ASSQGK 120
           NYT+HLD++LEEAA EFYP +KFMR                             A ++GK
Sbjct: 61  NYTQHLDRMLEEAAAEFYPNIKFMRVECPKYPGFCITRQKNEYPFIEIFHSPQHAGNEGK 120

Query: 121 ISDPNITKYSVKVLPFNYDPSAYGFREFFKRHGI 126
           + DPNIT+YSVKV+P+NYD S YGFREFFKR G+
Sbjct: 121 VQDPNITRYSVKVVPYNYDMSPYGFREFFKRQGV 154

The following BLAST results are available for this feature:
BLAST of Cp4.1LG11g00760 vs.
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG11g00760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038885442.16.06e-8692.19uncharacterized protein LOC120075825 isoform X3 [Benincasa hispida][more]
XP_022996547.13.25e-8581.53uncharacterized protein LOC111491762 [Cucurbita maxima] >XP_023545217.1 uncharac... [more]
XP_022962537.11.09e-8380.25uncharacterized protein LOC111462937 [Cucurbita moschata][more]
KAG6598213.13.23e-8281.29Type 2 DNA topoisomerase 6 subunit B-like protein, partial [Cucurbita argyrosper... [more]
XP_038885436.12.02e-7975.16uncharacterized protein LOC120075825 isoform X1 [Benincasa hispida] >XP_03888543... [more]
BLAST of Cp4.1LG11g00760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1K2861.57e-8581.53uncharacterized protein LOC111491762 OS=Cucurbita maxima OX=3661 GN=LOC111491762... [more]
A0A6J1HCY25.26e-8480.25uncharacterized protein LOC111462937 OS=Cucurbita moschata OX=3662 GN=LOC1114629... [more]
A0A1S3BIH61.55e-7672.61uncharacterized protein LOC103489940 OS=Cucumis melo OX=3656 GN=LOC103489940 PE=... [more]
A0A6J1BSI03.46e-7674.19uncharacterized protein LOC111005143 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A2I4HB132.23e-7269.48uncharacterized protein LOC109015033 OS=Juglans regia OX=51240 GN=LOC109015033 P... [more]
BLAST of Cp4.1LG11g00760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G57230.15.9e-5462.34Thioredoxin superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36076THIOREDOXIN SUPERFAMILY PROTEINcoord: 86..125
coord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG11g00760.1Cp4.1LG11g00760.1mRNA