Cp4.1LG11g00740 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG11g00740
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	homeobox protein knotted-1-like 6
Location	Cp4.1LG11: 125984 .. 137057 (+)
RNA-Seq Expression	Cp4.1LG11g00740
Synteny	Cp4.1LG11g00740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTAGCAGCTTTACTTACCCCTCCCCCTCTCCATCGCTCCTCTTTCTTCCTTTCCTTTCCTTTCCTTTCCTTTCCTTTCACCTGTAGTTGAAATGGGGGAGAACATGTACGGCATGCGCTCCACTCCCCAATTCTCGCCCAAGTCCTTCCTTCCACCCCACACTCCTATCCTTCCCCTCGATTACCAGACCTTCCTTCCCTCCACCAACTACTTTCCCCGCGATCGGATTCCTGTGTTCGGATCCGATGAACTGCTTTCCGAACCTGAACCACCTTCCATCACTCCAGATTTCCCGCTCGCTCAAGATGTTCCCAGCGTCATCAAGGCCCAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCACGCTTATATTGACTGCCACAAGGTGATCCAACAACTTCTTCCTATCTCTCTCCTTTTTTCTGTTCTCCACTTTCAATTGTGTTGCGCCCAACTATTGATTTACTACCATTCAATTACGTTCGGCTTTTGATCTTCCAATTCTGACTCCTGTGAAATACTCGGTTGTTTCTACATCATCCCCATGACTAATTTTTTACGGTCTTCCTTTTGGTTTTCCAAGAACCGAGACTTATTTCCCGAACAAGAAAGGAAGACGGGGAAAAAGTAGCGGCGCCTGACAATTTCTAGCTCAACTTGAAACTGAAAGTAGAAATTGCCCTTGTTTTTTTTCTTTTATGTTCCCTTTTACTATTAATCAAACCTAGAAATTAAAAATCATCCGTGTGTCTGATTTTCACTGCAATTCTAATGGAATCTTCGATGATTTTTAACCGAAAGGTTTTCTGGTGCATCATAAACTAACTTGCTACCAATTTAATTTCATTTCATTTAATTATGTGTTTCTATTTTGGGCTCAGGTTGGAGCTCCGCCGGAGATAGCTTGTTTGTTGGAGGAAATCCGGCGAGAAAATGACAGTCATAAACAAAACGCCATGTCCACGTGCTTCGGAGGCGATCCCGAGCTCGATGAGTTCATGGTAATGGTCCCCCCCGCTCACTCGCCCGCCCACACGCAATCTTCGTGATTCTAACTAATTTGGCCATGGTGCTTTCTATTCTTCTGTTCTACTCTATTCTAGTATAGCTGAAAACTGGTATTGTCTCTCTCCGGATAGGAAACATACTGTGACATGCTGGTGAAGTATAAATCAGATCTGTCAAGGCCCTTTCATGAAGCTTCCTCCTTCTTGAGTAACATCGAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACCAGAAGCTCCTCCAGTCAGTCTCTCTCCCTTTCTTTTTTTCTTTCAATAATCTCTTGTTTTCGCACTCTATTTCAACTTGTTTCTATTCGCCTACATTATTTTGACTTAATCTGAATCCCAAATGATTTATTATTAGGCCTTAGGAGAAAGAATACTAACCAAACGGGTAGATGTAAAATGCTTAAGCAACCACCACTTAGTCTCCCCAATCCGACCTATTCTGTCGATGTTTTTGATTTGCGGAATGCAAATCATGAACGCACTGAGACCCCCAAACAAAACTCGGAAGAATAGTATGGGGTGTTTCGCGTGGGGTAATAGAACACGAACAAACTGCGAACCCTAGTACAGAGAGACCCACGCCTTTGATTGCCCACGATTCTCGGGTCTTTTCCGGTGATTATTGCTTGCTCAGCGTTTTCTTTTTTGTACAATGGACATCATTATTTAAGCTTGGGGACTTTAAAACAACGCCTACTGAAGTCTGGACCTTCCTTCCCAGTTTTCCTAAACCGTTTTCCTTTTCAGTTTAGTTTTGTTATCTGGGATGGGTATTGGTTTAATTTCATTACTCAGCCACGGTAAAAATGCTTTTTGTTGTTTTTATCCATTTTTTCCTTTTCTTCGTTTCTTACCTTTTCGAGGATAAGGCGGATGTAAAGAGGTTTCCGTACTAGAGATTCTGATTTTGACTCTCGGATATTGGGGATGACTTTCCCGGGTAATGCTAATGGTAATGGTAATGGTATAGACTTATGGTCGGGGTGGTTGGTGACAATGATTAAATATGGGGTGCGAGTCTGGAGGGAACCTACCGATGTGGGACTTGTGGCCTGTTTGGGTTAATTCCCTTCTTTTACTCGGCGTGTAATGCTGTTCACATAAAAATATGGAAGGGTTTTTACTACCAAAATTAAAGATACGCACAGAGCTAAACAACTTCGACCACTCCCTCTGTCATCTATAAATGGGTGGAAGGCTCTCCTCCTGGTGCATGCTTGTTTAGTTGAATTTTAGTAGTCACACGCAGCACCAGTGTGGCAGGTGGTGTAGATTGTTGTTACCTTGGCATTATATGCTGGACGTTTTGTCTCCTATTGTTTTTGGTAGAGGGTTAGAAAAATATATTTTGCTTCAACTTTCCCTTTTTACTGTTGTTTTATCACTTCAACATTTCCATACTTGAGATGTTCATAGGACTGTATCAAACAGTTCTCTCATCTTATTGGACTAGACTTTACCATCTTTTTCCTTTTTTAAAAAAGAAAAATACAAAACAAAATAATGCCCATATCTGGTATTCAGAAGATGAAAATAGGACGGGCAGAAAAACAAGAAAGATTGAACCATGTTAATGTATTGCCTCAAACAAGCACTCGATAGTTGTTTGTCAATATTTTTACCCCATTAACTCTGCCTTTCTCCTCTTAAATAAAAAATAATAGCTGTGATTTTTTATGTCTTTTTGTCAATTTTTATTCAAGAAATGATTTATTAGAGTTCAGAATATTTTTACTTTACACTTGTTATAAACTATTAAAAAATTGCAAAAAGAAACTTTTCCTTGGATCTAAATTTTGTTTTTTAATACACCAGAAAATGTCCTAATAATTTATTGTTTAATATTATTATTAACTTTTGAAACATTTAATATTTTCTTCGTTGATTTTCCCATAAAATAGGTTTGGATGCAGGTAAAAGTATGTAGTTGCATGTTTATTAAAAAAAAAAATTATGGGTCATGAAACTGAATTGTGGAAAAAATTTTTGATATAGAAAATATTTGTATTAATTTTAATGCTCATAATTCAGTTATTCCTCCCTTTTTTAATTTGCACATCTTAATTTGAGTCTGAAAAATCACTTACATAGCTGCATACCTACTGTGAAACGCTTCCCAATGCCAATTTATATTTCCCGTAAACTAATAGTCATCGTTTCCCTAGGTACTCTACAACTTAGGTTGGTTTTTGGTTCTCTTTTCGTAAAATTGCGTTTGCGGTATATATATTTATTTGTTTTGCAACTTCTATGGGATTCATTTAGGATGTCTTCTTGCAGTTGAAAAATCTAATATTTATACAGTATTTGCTTGTTTGGGAACGTTTTCTTGAANATCATCTAAGCTTGACATGATCGATCTTGCCTGCAGAGTGATTCAAATCTCAAACAGATATTTTTTTTTCTTTTTTAGGATAGGTTTCTCATAGTTCTGATCATTTGGTTTTGTAATGTTGGAGGTTGAAATTATAAATTTGTGTGATTGATGTTCATTCTATTGCATTCAAGTAAATTACAGAAAGATTGAGTTTATATAATCTATGCCTGACATGTGGGTTTATGATTTGTAAGAATAATTACGTAGCTTAAGAAAATAGTGTTGGCTCACCGAGTTACACTGAGTTTATTTATGTGTGAGATTAGAAACTGCATTGCTTGGGATTAGTAAAATGCATGGATCAAGTATCCAAAATCACTACTCGAGCCATCCCACCCACCTTTTCCGCTATTTGCGAAATGTGCAAGTGCAAATGACTGAATATGGCAGCTTTAGATGTTCTCATCATCTTTGATTAAAGATGTAGCTTTGTAAAAGCGGTTAGATCATGGAATAGCCATCTCATTGGTCATAGTCGGGAACTAAAATAATTTATTGGGAAGGTACAAATTTGCCTTTTCAGGTATGCTGTCTTGTCGTCGTCTTTACATATTTCTTCACCCTAAATTGTCTTTCAGCGCTTTCAATGGAGTGCTCTAGGTCTAACTTACAGTTTTTAGAGTTCATCGTGATCATCTATTTTGAACGAATATGATTACAATTTTAGGAGAGAAACATTGGTTGTTCATGTGATGGCAGGAAAAATCAATATAATTAATTTATTTTTATTGAACGTGATTAGGTCTAATATTTTTGGCATACACTCGTTGTTGTGTTGTCTAGGTGACTACGGGATGTGATATAATTGAGTTTTTTTTTTTTAAAAAAAAAATTTTTTTTTTTCATATGATTGGACATTATTTTGATATTTTTATCATTGACAAAATGATCTCCACAATTTTATTTTCTTCTTATTATGCCTAGCACTTATATGATGAATATTCAAGTTTTACTAAATAACTTAAACTGATCAGTTTGAATACTTATAATTGCAACATATGAGCTTCATTTGTCATTTTTAATGTGCTTATTATTAGTTTATTTTAATTTTCTGGCTATACTCTCTCCATAGTATGCTAACTCATGGAGGCACGTATTTGTTTCTTGATTTGTTATCCCTTTTTGTTGTATGGTTGCTTCAACTACGTCAATATTGTTCATTAAAGCATGGTGCGTAAAATTCTTTACCATACTTATTTTGACATTGTGTTCACATCAAATTTTCGTTGCTAATATAACTCTTCCAGTATCTCCCAATACTAGCGGTTGAGTTTTTGATGACCCGTCTCTCTCGTTAGGATAAGCAGAGTAGAAAAGGGCGTAGATTCTTTTGTTCCTAAGTTTCCTATGTCATATATTCACACACAATTATATAGGCAATGCACTAAGTGCATGCACAAGAACATAAAGCTTATATAGTCTTCATATAGCTTTAGTGTTCTGGTTTCCAGAATGTTTTATGTTCGGATACGAATTTTGTGAAGATTACTCTTAGGCTTTGGTGTGCCCCTCCAGACCCTCTTGCCTGGCTAAGAAAAGAAGTCCGAAATTTTCACAGCTAAGATTCTTTAGTTTAGGCGAATCTATAATTCTGGCCCCATTCTTTTCGCTTTAAACACATCACTTTGCATCACTTTGATCACTTTAAATCCTTATTGTTTTATCTATTTCATCGTAGTTTTAAATTTTTCATGTATATGTTAGTTTAATATCTAACATTAACTTTAGATAGCAATAGAAAAATTAAATAATTAAAAATATATGTAAATTAATGATATGTCTGTATATACATTTTTTGCTAGTTAGTTTATAAATTACAATAGGTACTGAATTATATTTTCCTAAAATAAATTTCAAATTAAATTATTTAGAATACACGAACCAGTCAACCTTGAAAATTATATACATACATATATATATATATATTTATATATATATATATGTATGTATGTATGTATGTATATAACACATGGACCAAAATTATGCCTATTATAATAAAATCGTGACCTATTCCACTAGTGTATCACAATATTTTTAATATTTGAGTACTTTTAATTGATTGGACAAAAACGTCATTAAATTATATTCAATTATAGTATGTGCTCAGGTCTTTTAAACTGTTTTTCTGTCACTTGAAAATTAATTTATTTAAATGTGTGACAGGGAAAGGATATTTCAAATCTAAGAAAGTTAATAGATATATTATTATTAAATTACATCTAAAACTCCGAACATGAGCATAGCTGGTTTGACCTACAATCTTGACAAAGAGGTTAGTTGTCTGAATCAAATTTGTGTATTAAAAAAAGTTTTAATAATTAAAGTCATTCTTTCCATCATTCTCAATCTCCTGTATGTTATTGATCTCCAATAATAATAATAGTAGCAAATAAAATAATTGAAGATTCACATTGAGAATAAAAGATTTTGTTTTGGGAGTAGAATGAGATGTTTGAGGGTATTCTAAAATGGTGATATAGTGTCGGGTCGAGAAGGGTGTGGAGGTTTTGTAGCTCTCACATGGACTCCCGTGGTTTGCGCTGAGAAGCAGCTTTAAGGCCTCTCCCTCTCTCTCACCCACGCACTCTCTTCAGTGTTCTGTTGACAAATAGTCTGTTGTGGGTCTTTCAGCTTCATAATGTGTCTTACACGTGTGACCTGACTGCTTCGTATCTGTAGCTCCGATTCGGCTTTTGGGTGTCCCAGATTCCCACGTTGGGTTCTATTTCTTTAAATGAGAAAATTAATTTCATGTTTCTTCCCTCCTTGTGATCATTCTTGGGGGCCCTTTACTGCCAAATCCGTGTGCCCTTGCCCCTGCTATGACTCCCGATTTGGTCTCGTCGTTTTGACCACTGGTGTTTGTAGTGACCCAGAACCGTCCAAGGATGCAGGCTTTAATTAATTTTGGAGAAAAACTTTGTTGCACGTCCCGTTCTGTCTTTTGTCAGAAAAATACCTGTCCAACTAGAGTACTAATTGACCCAGGTTTAGACCCGATGGTATGGTTTCTTGAGAAGAATGATTTCTGCAAGAAATGCTATCAAATTTTATCTAGATTTTAGTCGGTCGTGGCCCCTTGGTTGTGCTCCCGAGCCCGTAGTTTTGATCACCTCCGTACTTTTAACTTTTAATCTGGTGCATGGTGGTGTGGGTATCTTCTCCCTTTCCAAGACAAGTTTTGGTTACCACGCCATCTTGTCCACTTGGACCGCGAGTCTGCATTTTCCATTCTGCCCAACAAGTTGGTCAACTAGATTCTTAAAATGTAACTTTCGTTTGAAGGATTTACTTTGTTTTGTATTCCTTGGTTTATTGCTCGCTTATTAGCTTCAGCCCATCGAATGTTTATTATGTTTTGTCGGAGATGCTAATGTAATTTAGTGATCTCTTTAAACACATATTTACAGTAAGGTTTTCTATCTTAGCTGCAGTTTCGGCTACAGTCAATTTTGTCGTTATTGTAACTGCGGTTACTTTTTTGGTTTAGTTGGTTTCGTTGTTCCGTATTATATCATAAGATCTGGTCAAATTATCAGGACTAGGAGTACAATACTGCTTAGCTCTAAGTCACCTGTATGGTTGGTTAGTTAACTTATGGTCAGTTAGTTAAGCTGGCAATAGTGCATGTATTAAAATTGCACGTGAGGAGAATGATAATATTATATAATGTCATTGTTCTTTCTTGAATTAGTTATCTCTTACTTTAAACAGTTGGGATAAATGATGTTCTAGTTGTAAGTCCCACATCCAGTGTTATTTTGTTTCCACAATAATAATGCGTTGATATTCCATTACTTCCAAAAGAGACTGCTAATTGTCCAAATAGGAGTGTTGGTTTCTGTTTTAACCAATTATTTATTTTTACATAAAAATAGAAAATAAGGCCATGTACTAAATTTTTTTCCCGAGTACCCTTTAACACGGACAAGCACATAGATTATTTCTAGTAATTTTGTCTGAAGGAGTGAACAAAAGGCATGCTTTGATGTCACTTATTTAGGGGGTTATTGGTTTCATAATCTTTAATATCAGTTTATGTGTCAACCATAGAAACATGCACGACTTCGTATTTAACGTCTCTTAACTATTGTGTTCTATTATTATGTTTATGGAAACTCTTGTTTGTAATATTTTAAAATATTTGCTTTTGTGGTGAAAAGACTGTAAACTAATGTATTCAAGCCTAAAACACATTGGGGAATATGGTAAAACACATTGGGGAATATGGTTAAAAATTCCAATCTTCCTAGCGGAAGGATACTATAAGATCTTAGACAAATAGTTGGGTTTGAGTAGTGAATTATATATCGAGATGTTCACGGGGCGGGGTTAGGGAATGGCATCTTTGTCCTTGTTCTTGTCCTCGCCCCATTTAAATCCTTGTCCCTTCAAGTTCTCCATTTAATTTTGTGAGGATCGAGTCCCCTTTGGAGATTTATTCGGTGTTGTTTCTTTTAATAAAAATAATTTCAAACAAATAGAATAATTTTTTTGCCCTAAAACTATATGTTTAAATGATTTATTCAGTTTTGTAGATTTATTTAGTGTTGTTTCTTTTAATACTCATGGTGAATTTTTTTTTCACTATTATACTATTAGAATGAAAATAGCCTCAAGGAAGAAAACGGACAAAGAAATCACGTTTAGAAGGTAGAATGAAACCAGTAACATCATCTTTGCTTCTCCTTGTGAGGATGAGTTCTACTATAGGAGAAATGTTTTGATGAGATTGAAACTATATACACCACATCACAAAACTTAAATTAATATTATTCTTTACAGTTTAATTGGCCAATACTAGAGCCTATAATTTACTAGAGCTACCCAATCTAACATTGAGTTTCATACTCTTATTGCCCCTTCCCTTCCATTCTTTCATTGTGTTTGTGAGTTATACTTCTGGTTGTTATTTGTGGCTGCTGTAAAAGCTTTTCTCGATCAGAGGAAAATGTGGGCGATTACTTTTGGAGTTGGCTTTTCAAGGAAAACAGATAATCTGCAAACTTGGCATTCTACGTTTACTGAAGACTAGAAGGATGCAATAAGAGAATCTACATTTGACCGGTCATTTTATGCTTTCAGATAATGGGTTCAAAGCAAGTGAATGGTGTTATAGCGGTGGTGGAACCATTGGACAAACTTAGGACTCTTATCTTTCAAGATCAGTAACCAACAAGATATGCCTTAGAGAGAGATTGTTTGAGTTTGGAGATGGATCCAATTGAAGAAGCCTGGAAGGATAATCTTGATGAGTTCCACAATATTACGTTTGACCTTGCAAATGCTGGAGAAAATTGTTAGATGAAAATGACGTGGTAATCAGTTTAACCTCTGTATCCAAATCTTTCCGTGAAGTGAAGGACGTTTGTAAGTATGCGATAGATGGCCGTACCTAAAACATGGTTCCCACGACCGAGAATAGGCGGGGGTGATTGTGATGCCTTGACTACTAGAATGTCTGTACGCTTGGATGCATAAATGGAAAACGCTTACATGATTTGATTAACAGGGCATGCTAGATAGGAACAACTCTCTGGCTTACAGTTCTATTGGCATTGTGTTCTTGAATTGTGGTGACACTCAGAGGGTTGAATTTTGAAGACATACGTAATATGACAGCAAGGCTTGATTATACACATCCAGACTCCTGGAAACCAGGCATTTTATTTTCTAATGGGGGTGCTAAATTTTTTATGAATGGTAAATTATTACTACGACATGAAAGGCGATAAGCATCTTGCCTTCATTAGAGAGTTAACCAATTAATATAATCCAGACCCTAAAATTAGGTGTTCCTTAAATAACAAGAGTCTGAAGCTTTGGATAAATTTAGAGAACGAAGGACACCGTCGAAAATCTGACTGGAAGTGAATTTAAGGTTGTTTGAACTGACTAGATTCTCAAACTTTGAATTAAGATCCTTCCAAACATGAGTGCTCTTGATTGTTTTCTGAAGGTGCTGTAGAAAATTTACAATGGATGTCTGCGAGTAAACTTCTGACTACTACCTGAATGACCAGCATTGAATTTGATCATGATCACTATAATGTTATATCATTCTATCTTCTATCTTCTTTTCGATGTCAAGAGAACAAGTCTTTATGTATCTCTACCATTTTTTTGGATGGATGTTAAGAAAACAAGTATCGACGTATCTCTACAATGGTACGATGTTGCCCACTTTAGGCATTAGTCATGATTTTGTTTGTTTTTGTTCTACCTAAAAGGATTGTCCTCACTTATGATGATATATAACGGAGATGTAGACGGGTGGCTACTTTGTCTTTTTTAAATGGCCATCTAATATTCGAATATCCTTCAATCTTTGTTGTCTGGCTTTGCTATATAGAAAACCCCTATCCTAAATCATTGAGTGATTCTGTTTCAGACTATCTTCATTCTGTTTTTGTACTAATTACTATGTTTTTATGTACAGTATGAGTCTTTATTTTTGTTTGATGACTCATGGGATAAATTTTGGGCTGTCTTTGGTAGTTCCTCTTATCTATGTATGTCTGGCTGAAAATTTTCTTTTGCAGACGAGGATGCCATGTCATCAGATGATGAGCTTAACTGGGGAGAGAGGGAAGTACAAGATGCTCAAATGAGGTTAGAAGACAAAGGTCTTAAAGATATGCTCTTGAGTAGATTTGGCAGCCACATTGGAACCTTGAAGCTGGAATTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGCTCGAGTGGTGGAATGTGCACTATAAATGGCCATATCCTACGGTACATTTTCTTTCTCCACCAGCAAATATACGTAGCCATGTTTTTAGTTCTCCAACGAATATTCTTGCAACTATTTTGGCATTTCCAGTTTGTAGCGCTCCTGACCTTAGTAGCTACTGTTAGTTGTCATGGTTCATCAGTTTTTTATTTTAGTGTAGCTTGTCATTATATTTTAATTCTGTCCGCACGCCATTGACTATGAAAGTCTTTTTGGATGTAAAATAAAGTTGGATTTAAAGTGGCTTGTTACTATGGAATTGATGACTGATAGTTCCGAGTGTTGCTGCAACACACGCAGGGTGCTTCGTTGCTTGTCTAGAGTCCCCATGGAAGGACATTTTAATCTTAAACTTGTTGCTGATTGAAACACATTTGCATTGAGATTTTGTGTTAGAAAAATTTAAAGCAACGTGATAGTAATGAATGAAGATAATTGTATTGTATTAATGGCGTATTTGTGAATCATCCAGGAAGCTGATAAGATGGCGCTGGCAGAGACAACAGGATTAGATCCGAAGCAAATTAACAATTGGTTCATAAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATTTGCAAGTATGGATGATGTGGGTGAACAATTATACGCTAGGCTCGACTCTTGAGACTGAGGTTATACATCATCCCAATGGGTATACATTACATGCTTTAAAATCACTTACTTTTGCTAAGCCCCAATAGTTTAGCGTATATATATATGTCCAAGAACAAACAATTGTGTTGAGTACATGGCTGGGAAACTATCAAAATGGCTTCCATACTTTTGCATCTCTTTTGTATATTTCTGAAATTGTTAACATTGATTATGGAAATGTTAATTGAAGTTTGGATGAGT

mRNA sequence

ATGATTGAAATGGGGGAGAACATGTACGGCATGCGCTCCACTCCCCAATTCTCGCCCAAGTCCTTCCTTCCACCCCACACTCCTATCCTTCCCCTCGATTACCAGACCTTCCTTCCCTCCACCAACTACTTTCCCCGCGATCGGATTCCTGTGTTCGGATCCGATGAACTGCTTTCCGAACCTGAACCACCTTCCATCACTCCAGATTTCCCGCTCGCTCAAGATGTTCCCAGCGTCATCAAGGCCCAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCACGCTTATATTGACTGCCACAAGGTTGGAGCTCCGCCGGAGATAGCTTGTTTGTTGGAGGAAATCCGGCGAGAAAATGACAGTCATAAACAAAACGCCATGTCCACGTGCTTCGGAGGCGATCCCGAGCTCGATGAGTTCATGGAAACATACTGTGACATGCTGGTGAAGTATAAATCAGATCTGTCAAGGCCCTTTCATGAAGCTTCCTCCTTCTTGAGTAACATCGAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACCAGAAGCTCCTCCAACGAGGATGCCATGTCATCAGATGATGAGCTTAACTGGGGAGAGAGGGAAGTACAAGATGCTCAAATGAGGTTAGAAGACAAAGGTCTTAAAGATATGCTCTTGAGTAGATTTGGCAGCCACATTGGAACCTTGAAGCTGGAATTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGCTCGAGTGGTGGAATGTGCACTATAAATGGCCATATCCTACGGAAGCTGATAAGATGGCGCTGGCAGAGACAACAGGATTAGATCCGAAGCAAATTAACAATTGGTTCATAAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATTTGCAAGTATGGATGATGTGGGTGAACAATTATACGCTAGGCTCGACTCTTGAGACTGAGGTTATACATCATCCCAATGGGTATACATTACATGCTTTAAAATCACTTACTTTTGCTAAGCCCCAATAGTTTAGCGTATATATATATGTCCAAGAACAAACAATTGTGTTGAGTACATGGCTGGGAAACTATCAAAATGGCTTCCATACTTTTGCATCTCTTTTGTATATTTCTGAAATTGTTAACATTGATTATGGAAATGTTAATTGAAGTTTGGATGAGT

Coding sequence (CDS)

ATGATTGAAATGGGGGAGAACATGTACGGCATGCGCTCCACTCCCCAATTCTCGCCCAAGTCCTTCCTTCCACCCCACACTCCTATCCTTCCCCTCGATTACCAGACCTTCCTTCCCTCCACCAACTACTTTCCCCGCGATCGGATTCCTGTGTTCGGATCCGATGAACTGCTTTCCGAACCTGAACCACCTTCCATCACTCCAGATTTCCCGCTCGCTCAAGATGTTCCCAGCGTCATCAAGGCCCAAATTCTCTCTCATCCTACCTATCCTCGTTTGCTTCACGCTTATATTGACTGCCACAAGGTTGGAGCTCCGCCGGAGATAGCTTGTTTGTTGGAGGAAATCCGGCGAGAAAATGACAGTCATAAACAAAACGCCATGTCCACGTGCTTCGGAGGCGATCCCGAGCTCGATGAGTTCATGGAAACATACTGTGACATGCTGGTGAAGTATAAATCAGATCTGTCAAGGCCCTTTCATGAAGCTTCCTCCTTCTTGAGTAACATCGAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACCAGAAGCTCCTCCAACGAGGATGCCATGTCATCAGATGATGAGCTTAACTGGGGAGAGAGGGAAGTACAAGATGCTCAAATGAGGTTAGAAGACAAAGGTCTTAAAGATATGCTCTTGAGTAGATTTGGCAGCCACATTGGAACCTTGAAGCTGGAATTTTCAAAGAAGAAGAAGAAAGGAAAACTACCTAAAGAAGGAAGGAAAGTACTGCTCGAGTGGTGGAATGTGCACTATAAATGGCCATATCCTACGGAAGCTGATAAGATGGCGCTGGCAGAGACAACAGGATTAGATCCGAAGCAAATTAACAATTGGTTCATAAATCAACGAAAGCGGCACTGGAAACCTTCTGAAAGTATGCAATTTGCAAGTATGGATGATGTGGGTGAACAATTATACGCTAGGCTCGACTCTTGA

Protein sequence

MIEMGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEPPSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGASTRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESMQFASMDDVGEQLYARLDS

Homology

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BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot
Match: Q84JS6 (Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 9.2e-101
Identity = 197/319 (61.76%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFL--PPHTPILPLDYQTFLPSTNYFPRDRI-PVFGSDELLS--- 65
           + MY   S   +S KS L   P + + P DYQ  L S+     +R+  VFGSDELLS   
Sbjct: 2   DGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS--AGENRVSDVFGSDELLSVAV 61

Query: 66  ---EPEPPSITPDFPLAQDVPS--VIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLE 125
                E  SI P+     D  S  VIKA+I  HP+YPRLL AYIDC KVGAPPEIACLLE
Sbjct: 62  SALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE 121

Query: 126 EIRRENDSHKQNAM-STCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQ 185
           EI+RE+D +KQ  + S+CFG DPELDEFMETYCD+LVKYKSDL+RPF EA+ FL+ IE+Q
Sbjct: 122 EIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQ 181

Query: 186 LSNLCAGA-STRSSSNEDAMSSDDELNWGEREV-QDAQMRLEDKGLKDMLLSRFGSHIGT 245
           L NLC G  S R  S +  +SSD+EL+ G+ EV +D + R ED+ LKD LL +FGS I T
Sbjct: 182 LRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRIST 241

Query: 246 LKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFIN 305
           LKLEFSKKKKKGKLP+E R+ LL+WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWFIN
Sbjct: 242 LKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFIN 301

Query: 306 QRKRHWKPSESMQFASMDD 311
           QRKRHWKPSE+M FA MDD
Sbjct: 302 QRKRHWKPSENMPFAMMDD 318

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot
Match: P46640 (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 347.8 bits (891), Expect = 1.3e-94
Identity = 184/316 (58.23%), Postives = 228/316 (72.15%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEPPS 65
           + M G RST  +S K+     T ++P DYQ+ + ST     D   +FGSDEL +      
Sbjct: 2   DRMCGFRSTEDYSEKA-----TLMMPSDYQSLICSTT---GDNQRLFGSDELATALS-SE 61

Query: 66  ITPDFPLAQD--VPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 125
           + P    A+D    SVIK++I SHP YPRLL  YIDC KVGAP EIAC+LEEI+REN  +
Sbjct: 62  LLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY 121

Query: 126 KQN-AMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAG-A 185
           K++ A  +CFG DPELDEFMETYCD+LVKYK+DL+RPF EA++F++ IE+QL NLC G A
Sbjct: 122 KRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPA 181

Query: 186 STRSSSNEDAMSSDDELNWGER-EVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKK 245
           S  + S++ A+SSD+EL   +     D+Q R  D+ LKD LL +FGSHI +LKLEFSKKK
Sbjct: 182 SATALSDDGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKK 241

Query: 246 KKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPS 305
           KKGKLP+E R+ LL+WWNVH KWPYPTE DK++LAE TGLD KQINNWFINQRKRHWKPS
Sbjct: 242 KKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPS 301

Query: 306 ESMQFASMDDVGEQLY 317
           E+M F  MDD  E  +
Sbjct: 302 ENMPFDMMDDSNETFF 308

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot
Match: Q9FP29 (Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH6 PE=2 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.1e-74
Identity = 141/248 (56.85%), Postives = 177/248 (71.37%), Query Frame = 0


Query: 73  AQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSHKQNAMSTCF 132
           + D+  ++KAQI  HP YP LL AYI+C KVGAPPE+A LL+EI RE  +      +   
Sbjct: 36  SSDLTELMKAQIAGHPRYPTLLSAYIECRKVGAPPEVASLLKEIGRERRAGGGGGGAGQI 95

Query: 133 GGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAG-----ASTRSSS 192
           G DPELDEFME YC +LV+YK +LSRPF EA+SFLS+I+ QLSNLC+G     A+T + S
Sbjct: 96  GVDPELDEFMEAYCRVLVRYKEELSRPFDEAASFLSSIQTQLSNLCSGATSPPATTATHS 155

Query: 193 NEDAMSSDDELNWGEREV----QDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 252
           +E   SSD++   GE ++    Q+   RL D  LK+MLL ++   +  L+ EF KK+KKG
Sbjct: 156 DEMVGSSDEDQCSGETDMLDIGQEQSSRLADHELKEMLLKKYSGCLSRLRSEFLKKRKKG 215

Query: 253 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 312
           KLPK+ R  LLEWWN HY+WPYPTE DK+ LA  TGLDPKQINNWFINQRKRHWKPS+ M
Sbjct: 216 KLPKDARSALLEWWNTHYRWPYPTEEDKLRLAARTGLDPKQINNWFINQRKRHWKPSDGM 275

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot
Match: A2Y007 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH71 PE=2 SV=2)

HSP 1 Score: 272.7 bits (696), Expect = 5.3e-72
Identity = 141/267 (52.81%), Postives = 180/267 (67.42%), Query Frame = 0


Query: 51  VFGSDELLSEPEPPSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIA 110
           V G       P PP+ T     A D+  ++KAQI  HP+YP LL AYI+C KVGAPPE+ 
Sbjct: 29  VAGGGSSPPHPPPPATT---AAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVT 88

Query: 111 CLLEEIRRENDSHKQNAMSTC-FGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSN 170
            LLEEI RE       A +    G DPELDEFMETYC +L +YK +L+RPF EA+SFL+ 
Sbjct: 89  TLLEEIGREGRGGGGGATAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTG 148

Query: 171 IELQLSNLCAGASTRSSSNEDAM-SSDDELNWGEREV----QDAQMRLEDKGLKDMLLSR 230
           I  QL++LC GA   + ++++ + SS+DE   G+ +     Q+   RL D  LK+MLL +
Sbjct: 149 IHTQLASLCGGAPPPTDNSDEMVGSSEDEPCSGDADAADFGQEHSSRLADHELKEMLLKK 208

Query: 231 FGSHIGTLKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQ 290
           +   +  L+ EF KK+KKGKLPK+ R  L++WWN HY+WPYPTE DK+ LA  TGLDPKQ
Sbjct: 209 YSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQ 268

Query: 291 INNWFINQRKRHWKPSESMQFASMDDV 312
           INNWFINQRKRHWKPSE M+FA M+ V
Sbjct: 269 INNWFINQRKRHWKPSEDMRFALMEGV 292

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot
Match: Q7GDL5 (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=OSH71 PE=2 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 5.3e-72
Identity = 141/267 (52.81%), Postives = 180/267 (67.42%), Query Frame = 0


Query: 51  VFGSDELLSEPEPPSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIA 110
           V G       P PP+ T     A D+  ++KAQI  HP+YP LL AYI+C KVGAPPE+ 
Sbjct: 29  VAGGGSSPPHPPPPATT---AAAADLTELMKAQIAGHPSYPSLLSAYIECRKVGAPPEVT 88

Query: 111 CLLEEIRRENDSHKQNAMSTC-FGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSN 170
            LLEEI RE       A +    G DPELDEFMETYC +L +YK +L+RPF EA+SFL+ 
Sbjct: 89  TLLEEIGREGRGGGGGATAGGEIGLDPELDEFMETYCRVLERYKEELTRPFDEAASFLTG 148

Query: 171 IELQLSNLCAGASTRSSSNEDAM-SSDDELNWGEREV----QDAQMRLEDKGLKDMLLSR 230
           I  QL++LC GA   + ++++ + SS+DE   G+ +     Q+   RL D  LK+MLL +
Sbjct: 149 IHTQLASLCGGAPPPTDNSDEMVGSSEDEPCSGDADAADFGQEHSSRLADHELKEMLLKK 208

Query: 231 FGSHIGTLKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQ 290
           +   +  L+ EF KK+KKGKLPK+ R  L++WWN HY+WPYPTE DK+ LA  TGLDPKQ
Sbjct: 209 YSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQ 268

Query: 291 INNWFINQRKRHWKPSESMQFASMDDV 312
           INNWFINQRKRHWKPSE M+FA M+ V
Sbjct: 269 INNWFINQRKRHWKPSEDMRFALMEGV 292

[Close]

BLAST of Cp4.1LG11g00740 vs. NCBI nr
Match: XP_023546842.1 (homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653 bits (1684), Expect = 1.29e-236
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP
Sbjct: 1   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 60

Query: 64  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 123
           PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH
Sbjct: 61  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 120

Query: 124 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 183
           KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST
Sbjct: 121 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 180

Query: 184 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 243
           RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG
Sbjct: 181 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 240

Query: 244 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 303
           KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM
Sbjct: 241 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 300

Query: 304 QFASMDDVGEQLYARLDS 321
           QFASMDDVGEQLYARLDS
Sbjct: 301 QFASMDDVGEQLYARLDS 318

[Close]

BLAST of Cp4.1LG11g00740 vs. NCBI nr
Match: XP_022997562.1 (homeobox protein knotted-1-like 6 [Cucurbita maxima])

HSP 1 Score: 639 bits (1649), Expect = 2.80e-231
Identity = 311/318 (97.80%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGENMYGMRSTPQFSPKSFL PHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSE EP
Sbjct: 1   MGENMYGMRSTPQFSPKSFLSPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEAEP 60

Query: 64  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 123
           PSITPDFPLAQDVP++IKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH
Sbjct: 61  PSITPDFPLAQDVPTLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 120

Query: 124 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 183
           KQNA+STCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLS+IELQLSNLCAGAST
Sbjct: 121 KQNAISTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSDIELQLSNLCAGAST 180

Query: 184 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 243
           RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG
Sbjct: 181 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 240

Query: 244 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 303
           KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM
Sbjct: 241 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 300

Query: 304 QFASMDDVGEQLYARLDS 321
           QFASMDDVGEQLYARLDS
Sbjct: 301 QFASMDDVGEQLYARLDS 318

[Close]

BLAST of Cp4.1LG11g00740 vs. NCBI nr
Match: KAG7029210.1 (Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 633 bits (1632), Expect = 1.09e-228
Identity = 309/318 (97.17%), Postives = 311/318 (97.80%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGEN YGMRSTPQFSP SFL PHTPILPLDYQ FLPSTNYFPRDRIPVFGSDELL E EP
Sbjct: 1   MGENTYGMRSTPQFSPNSFLSPHTPILPLDYQAFLPSTNYFPRDRIPVFGSDELLPEAEP 60

Query: 64  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 123
            SITPDFPLAQDVPS+IKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH
Sbjct: 61  TSITPDFPLAQDVPSLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 120

Query: 124 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 183
           KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST
Sbjct: 121 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 180

Query: 184 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 243
           RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG
Sbjct: 181 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 240

Query: 244 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 303
           KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM
Sbjct: 241 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 300

Query: 304 QFASMDDVGEQLYARLDS 321
           QFASMDDVGEQLYARLDS
Sbjct: 301 QFASMDDVGEQLYARLDS 318

[Close]

BLAST of Cp4.1LG11g00740 vs. NCBI nr
Match: XP_022961750.1 (homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022961751.1 homeobox protein knotted-1-like 6 [Cucurbita moschata])

HSP 1 Score: 623 bits (1607), Expect = 7.34e-225
Identity = 307/319 (96.24%), Postives = 309/319 (96.87%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGEN YGMRSTPQFSP SFL PHTPILPLDY  FLPSTNYFPRDRIP FGSDELLS+ EP
Sbjct: 1   MGENTYGMRSTPQFSPNSFLSPHTPILPLDYPAFLPSTNYFPRDRIPAFGSDELLSDAEP 60

Query: 64  P-SITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS 123
             SITPDFPLAQDVPSVIKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS
Sbjct: 61  TTSITPDFPLAQDVPSVIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS 120

Query: 124 HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAS 183
           HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPF EASSFLSNIELQLSNLCAGAS
Sbjct: 121 HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFREASSFLSNIELQLSNLCAGAS 180

Query: 184 TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK 243
           TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK
Sbjct: 181 TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK 240

Query: 244 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 303
           GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES
Sbjct: 241 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 300

Query: 304 MQFASMDDVGEQLYARLDS 321
           MQFASMDDVGEQLYARLDS
Sbjct: 301 MQFASMDDVGEQLYARLDS 319

[Close]

BLAST of Cp4.1LG11g00740 vs. NCBI nr
Match: KAG6598232.1 (Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 597 bits (1539), Expect = 1.21e-210
Identity = 295/305 (96.72%), Postives = 297/305 (97.38%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGEN YGMRSTPQFSP SFL PHTPILPLDYQ FLPSTNYFPRDRIPVFGSDELLSE EP
Sbjct: 1   MGENTYGMRSTPQFSPNSFLSPHTPILPLDYQAFLPSTNYFPRDRIPVFGSDELLSEAEP 60

Query: 64  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 123
            SITPDFPLAQDVPS+IKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH
Sbjct: 61  TSITPDFPLAQDVPSLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 120

Query: 124 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 183
           KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST
Sbjct: 121 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 180

Query: 184 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGL-KDMLLSRFGSHIGTLKLEFSKKKKK 243
           RSSSNEDAMSSDDELN GEREVQDAQMRLEDKGL KDMLLSRFGSHIGTLKLEFSKKKKK
Sbjct: 181 RSSSNEDAMSSDDELNCGEREVQDAQMRLEDKGLIKDMLLSRFGSHIGTLKLEFSKKKKK 240

Query: 244 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 303
           GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES
Sbjct: 241 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 300

Query: 304 MQFAS 307
           MQFAS
Sbjct: 301 MQFAS 305

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL
Match: A0A6J1K5E4 (homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111492452 PE=4 SV=1)

HSP 1 Score: 639 bits (1649), Expect = 1.35e-231
Identity = 311/318 (97.80%), Postives = 316/318 (99.37%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGENMYGMRSTPQFSPKSFL PHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSE EP
Sbjct: 1   MGENMYGMRSTPQFSPKSFLSPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEAEP 60

Query: 64  PSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 123
           PSITPDFPLAQDVP++IKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH
Sbjct: 61  PSITPDFPLAQDVPTLIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 120

Query: 124 KQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAST 183
           KQNA+STCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLS+IELQLSNLCAGAST
Sbjct: 121 KQNAISTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSDIELQLSNLCAGAST 180

Query: 184 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 243
           RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG
Sbjct: 181 RSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKG 240

Query: 244 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 303
           KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM
Sbjct: 241 KLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESM 300

Query: 304 QFASMDDVGEQLYARLDS 321
           QFASMDDVGEQLYARLDS
Sbjct: 301 QFASMDDVGEQLYARLDS 318

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL
Match: A0A6J1HD67 (homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462426 PE=4 SV=1)

HSP 1 Score: 623 bits (1607), Expect = 3.55e-225
Identity = 307/319 (96.24%), Postives = 309/319 (96.87%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEP 63
           MGEN YGMRSTPQFSP SFL PHTPILPLDY  FLPSTNYFPRDRIP FGSDELLS+ EP
Sbjct: 1   MGENTYGMRSTPQFSPNSFLSPHTPILPLDYPAFLPSTNYFPRDRIPAFGSDELLSDAEP 60

Query: 64  P-SITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS 123
             SITPDFPLAQDVPSVIKA+ILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS
Sbjct: 61  TTSITPDFPLAQDVPSVIKAKILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDS 120

Query: 124 HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGAS 183
           HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPF EASSFLSNIELQLSNLCAGAS
Sbjct: 121 HKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFREASSFLSNIELQLSNLCAGAS 180

Query: 184 TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK 243
           TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK
Sbjct: 181 TRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKK 240

Query: 244 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 303
           GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES
Sbjct: 241 GKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSES 300

Query: 304 MQFASMDDVGEQLYARLDS 321
           MQFASMDDVGEQLYARLDS
Sbjct: 301 MQFASMDDVGEQLYARLDS 319

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL
Match: A0A1S3BA77 (homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103487707 PE=4 SV=1)

HSP 1 Score: 505 bits (1300), Expect = 2.04e-178
Identity = 260/326 (79.75%), Postives = 277/326 (84.97%), Query Frame = 0


Query: 4   MGENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEP-- 63
           M ENMYGM       PKSFLP    ILPLDYQT LPSTN   RDRIP+FGS EL+S P  
Sbjct: 1   MDENMYGM-------PKSFLPSDNLILPLDYQTLLPSTN-LRRDRIPMFGSHELVSRPTS 60

Query: 64  -----EPPSITPDFPLAQ-DVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEE 123
                EPPS T DF L + DV SV KA+I+SHP YPRLLHAYIDC KVGAPPEIACLLEE
Sbjct: 61  SMSQAEPPSTTLDFSLPEEDVLSVTKAKIVSHPIYPRLLHAYIDCQKVGAPPEIACLLEE 120

Query: 124 IRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLS 183
           IRRENDSH+QNA+STCFG DPELDEFME YCDML+KYKSDLSRPFHEA SFL+NI+LQL 
Sbjct: 121 IRRENDSHEQNAISTCFGADPELDEFMEAYCDMLMKYKSDLSRPFHEAFSFLNNIQLQLC 180

Query: 184 NLCAGASTRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLE 243
           NL AGAST + SNEDAMSSDDELN GERE+QD QMRLEDKGLKDMLLSRFG HIGTLKLE
Sbjct: 181 NLGAGASTTTPSNEDAMSSDDELNCGERELQDGQMRLEDKGLKDMLLSRFGGHIGTLKLE 240

Query: 244 FSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKR 303
           FSKKKKKGKLPKEGRKVLLEWW+VHYKWPYPTEADK+ALAETTGLDPKQINNWFINQRKR
Sbjct: 241 FSKKKKKGKLPKEGRKVLLEWWDVHYKWPYPTEADKVALAETTGLDPKQINNWFINQRKR 300

Query: 304 HWKPSESMQFASMDDVGEQLYARLDS 321
           HWKPSESMQF ++D+  EQ  ARLDS
Sbjct: 301 HWKPSESMQFGNIDNTAEQFSARLDS 318

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL
Match: A0A6J1BPB0 (homeobox protein knotted-1-like 6 OS=Momordica charantia OX=3673 GN=LOC111004569 PE=4 SV=1)

HSP 1 Score: 483 bits (1243), Expect = 2.22e-169
Identity = 255/330 (77.27%), Postives = 278/330 (84.24%), Query Frame = 0


Query: 2   IEMGEN--MYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDEL-- 61
           +EM EN  M+ +RST  +S KSFL P      LDY +FL ST++  RDRIP+FGS EL  
Sbjct: 20  LEMEENIDMFAIRSTADYSAKSFLSPDNL---LDYHSFLSSTSF--RDRIPIFGSHELPS 79

Query: 62  ----LSEPEPPSITPDFPLAQDVPSVIKAQ--ILSHPTYPRLLHAYIDCHKVGAPPEIAC 121
               +SE E PSITP FPL  DV SVIKA+  I+SHPTYPRLLHAYIDC KVGAPPEIA 
Sbjct: 80  AASAVSEAEAPSITPAFPLQPDVLSVIKAKAKIVSHPTYPRLLHAYIDCQKVGAPPEIAG 139

Query: 122 LLEEIRRENDSHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIE 181
           LLEEIRREN   KQ+A+STCFG DPELDEFMETYC+MLVKYKSDLS PF+EASSFL+NIE
Sbjct: 140 LLEEIRREN---KQHAISTCFGADPELDEFMETYCEMLVKYKSDLSTPFYEASSFLNNIE 199

Query: 182 LQLSNLCAGASTRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGT 241
           LQLS+LCAGAS RS SNEDAMSSDDELNWGERE+Q AQM LEDK LKDMLLSRFGSHIGT
Sbjct: 200 LQLSSLCAGASARSPSNEDAMSSDDELNWGERELQGAQMSLEDKSLKDMLLSRFGSHIGT 259

Query: 242 LKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFIN 301
           LKLEFSKKKKKGKLPKEGRKVL EWWNVHYKWPYPTEADK+ALAETTGLDPKQINNWFIN
Sbjct: 260 LKLEFSKKKKKGKLPKEGRKVLHEWWNVHYKWPYPTEADKIALAETTGLDPKQINNWFIN 319

Query: 302 QRKRHWKPSESMQFASMDDVGEQLYARLDS 321
           QRKRHWKPSESMQ A++D++ EQ    LDS
Sbjct: 320 QRKRHWKPSESMQLATVDNLPEQFCGSLDS 341

[Close]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL
Match: A0A6J1B2J8 (homeobox protein knotted-1-like 6 OS=Herrania umbratica OX=108875 GN=LOC110423504 PE=3 SV=1)

HSP 1 Score: 412 bits (1058), Expect = 1.17e-141
Identity = 206/315 (65.40%), Postives = 248/315 (78.73%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEP---- 65
           E MYG  ST +++ K+ + P   ILP +YQ +L S+      RIP+FGSDEL+S      
Sbjct: 2   EEMYGFHSTGEYADKALMSPENLILPSEYQAWLCSSG-----RIPMFGSDELISAASAVS 61

Query: 66  EPPSITPDFPLAQDVPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRREND 125
           E  SITP+    +D+ SVIKA+I SHP+YPRLL AYIDC KVGAPPE+A +L+EI REND
Sbjct: 62  EAASITPEIQREEDMSSVIKAKIASHPSYPRLLEAYIDCQKVGAPPEVASILDEILREND 121

Query: 126 SHKQNAMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAGA 185
            +K++ + TC G DPELDEFMETYCDMLVKYKSDLSRPF EA+ FL+ IE+QL NLC GA
Sbjct: 122 VNKRDIVPTCLGADPELDEFMETYCDMLVKYKSDLSRPFDEATVFLNKIEMQLRNLCTGA 181

Query: 186 STRSSSNEDAMSSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKK 245
           S + +S+E A SSD++L+ GE + Q+AQ R ED+ LKD LL RFGSHI TLKLEFSKKKK
Sbjct: 182 SIQGASDEGAASSDEDLSGGEVDAQEAQPRSEDRDLKDTLLRRFGSHISTLKLEFSKKKK 241

Query: 246 KGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSE 305
           KGKLP+E R+ LL+WWNVHYKWPYPTEADK+ALAE+TGLD KQINNWFINQRKRHWKPSE
Sbjct: 242 KGKLPREARQTLLDWWNVHYKWPYPTEADKIALAESTGLDQKQINNWFINQRKRHWKPSE 301

Query: 306 SMQFASMDDVGEQLY 316
           SMQFA MD++  Q +
Sbjct: 302 SMQFAVMDNLSGQFF 311

[Close]

BLAST of Cp4.1LG11g00740 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 368.2 bits (944), Expect = 6.6e-102
Identity = 197/319 (61.76%), Postives = 233/319 (73.04%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFL--PPHTPILPLDYQTFLPSTNYFPRDRI-PVFGSDELLS--- 65
           + MY   S   +S KS L   P + + P DYQ  L S+     +R+  VFGSDELLS   
Sbjct: 2   DGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS--AGENRVSDVFGSDELLSVAV 61

Query: 66  ---EPEPPSITPDFPLAQDVPS--VIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLE 125
                E  SI P+     D  S  VIKA+I  HP+YPRLL AYIDC KVGAPPEIACLLE
Sbjct: 62  SALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE 121

Query: 126 EIRRENDSHKQNAM-STCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQ 185
           EI+RE+D +KQ  + S+CFG DPELDEFMETYCD+LVKYKSDL+RPF EA+ FL+ IE+Q
Sbjct: 122 EIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQ 181

Query: 186 LSNLCAGA-STRSSSNEDAMSSDDELNWGEREV-QDAQMRLEDKGLKDMLLSRFGSHIGT 245
           L NLC G  S R  S +  +SSD+EL+ G+ EV +D + R ED+ LKD LL +FGS I T
Sbjct: 182 LRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRIST 241

Query: 246 LKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFIN 305
           LKLEFSKKKKKGKLP+E R+ LL+WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWFIN
Sbjct: 242 LKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFIN 301

Query: 306 QRKRHWKPSESMQFASMDD 311
           QRKRHWKPSE+M FA MDD
Sbjct: 302 QRKRHWKPSENMPFAMMDD 318

[Close]

BLAST of Cp4.1LG11g00740 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 363.2 bits (931), Expect = 2.1e-100
Identity = 197/321 (61.37%), Postives = 233/321 (72.59%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFL--PPHTPILPLDYQTFLPSTNYFPRDRI-PVFGSDELLS--- 65
           + MY   S   +S KS L   P + + P DYQ  L S+     +R+  VFGSDELLS   
Sbjct: 2   DGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSS--AGENRVSDVFGSDELLSVAV 61

Query: 66  ---EPEPPSITPDFPLAQDVPS--VIKAQILSHPTYPRLLHAYIDCHK--VGAPPEIACL 125
                E  SI P+     D  S  VIKA+I  HP+YPRLL AYIDC K  VGAPPEIACL
Sbjct: 62  SALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACL 121

Query: 126 LEEIRRENDSHKQNAM-STCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIE 185
           LEEI+RE+D +KQ  + S+CFG DPELDEFMETYCD+LVKYKSDL+RPF EA+ FL+ IE
Sbjct: 122 LEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIE 181

Query: 186 LQLSNLCAGA-STRSSSNEDAMSSDDELNWGEREV-QDAQMRLEDKGLKDMLLSRFGSHI 245
           +QL NLC G  S R  S +  +SSD+EL+ G+ EV +D + R ED+ LKD LL +FGS I
Sbjct: 182 MQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRI 241

Query: 246 GTLKLEFSKKKKKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWF 305
            TLKLEFSKKKKKGKLP+E R+ LL+WWN+HYKWPYPTE DK+ALA+ TGLD KQINNWF
Sbjct: 242 STLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWF 301

Query: 306 INQRKRHWKPSESMQFASMDD 311
           INQRKRHWKPSE+M FA MDD
Sbjct: 302 INQRKRHWKPSENMPFAMMDD 320

[Close]

BLAST of Cp4.1LG11g00740 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 347.8 bits (891), Expect = 9.2e-96
Identity = 184/316 (58.23%), Postives = 228/316 (72.15%), Query Frame = 0


Query: 6   ENMYGMRSTPQFSPKSFLPPHTPILPLDYQTFLPSTNYFPRDRIPVFGSDELLSEPEPPS 65
           + M G RST  +S K+     T ++P DYQ+ + ST     D   +FGSDEL +      
Sbjct: 2   DRMCGFRSTEDYSEKA-----TLMMPSDYQSLICSTT---GDNQRLFGSDELATALS-SE 61

Query: 66  ITPDFPLAQD--VPSVIKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSH 125
           + P    A+D    SVIK++I SHP YPRLL  YIDC KVGAP EIAC+LEEI+REN  +
Sbjct: 62  LLPRIRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVY 121

Query: 126 KQN-AMSTCFGGDPELDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAG-A 185
           K++ A  +CFG DPELDEFMETYCD+LVKYK+DL+RPF EA++F++ IE+QL NLC G A
Sbjct: 122 KRDVAPLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPA 181

Query: 186 STRSSSNEDAMSSDDELNWGER-EVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKK 245
           S  + S++ A+SSD+EL   +     D+Q R  D+ LKD LL +FGSHI +LKLEFSKKK
Sbjct: 182 SATALSDDGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKK 241

Query: 246 KKGKLPKEGRKVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPS 305
           KKGKLP+E R+ LL+WWNVH KWPYPTE DK++LAE TGLD KQINNWFINQRKRHWKPS
Sbjct: 242 KKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPS 301

Query: 306 ESMQFASMDDVGEQLY 317
           E+M F  MDD  E  +
Sbjct: 302 ENMPFDMMDDSNETFF 308

[Close]

BLAST of Cp4.1LG11g00740 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 254.2 bits (648), Expect = 1.4e-67
Identity = 126/249 (50.60%), Postives = 166/249 (66.67%), Query Frame = 0


Query: 80  IKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSHKQNAMSTCFGG--DPE 139
           +KA+I++HP Y  LL AY+DC K+GAPP++   +   R++ ++ +Q +  +      DPE
Sbjct: 134 MKAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPE 193

Query: 140 LDEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNLCAG---ASTRSSSNEDAMSS 199
           LD+FME YCDMLVKY+ +L+RP  EA  F+  IE QLS LC              D M S
Sbjct: 194 LDQFMEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGS 253

Query: 200 DDE----LNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGR 259
            DE     + GE E+ +   R ED+ LK+ LL ++  ++ +LK E SKKKKKGKLPKE R
Sbjct: 254 SDEEQENNSGGETELPEIDPRAEDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEAR 313

Query: 260 KVLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESMQFASMDD 319
           + LL WW +HYKWPYP+E++K+ALAE+TGLD KQINNWFINQRKRHWKPSE MQF  MD 
Sbjct: 314 QKLLTWWELHYKWPYPSESEKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDG 373

[Close]

BLAST of Cp4.1LG11g00740 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 244.2 bits (622), Expect = 1.4e-64
Identity = 125/238 (52.52%), Postives = 162/238 (68.07%), Query Frame = 0


Query: 80  IKAQILSHPTYPRLLHAYIDCHKVGAPPEIACLLEEIRRENDSHKQNAMST-CFGGDPEL 139
           +KA+I++HP Y RLL AY++C KVGAPPE+   LEE      +   +   T C G DP L
Sbjct: 121 VKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGL 180

Query: 140 DEFMETYCDMLVKYKSDLSRPFHEASSFLSNIELQLSNL-CAGASTRSSSNEDAM----- 199
           D+FME YC+MLVKY+ +LS+PF EA  FL  +E Q  +L  +  S+ S   E A+     
Sbjct: 181 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNN 240

Query: 200 -SSDDELNWGEREVQDAQMRLEDKGLKDMLLSRFGSHIGTLKLEFSKKKKKGKLPKEGRK 259
            SS++E++     V     + ED+ LK  LL ++  ++G+LK EF KK+KKGKLPKE R+
Sbjct: 241 GSSEEEVDMNNEFVDP---QAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQ 300

Query: 260 VLLEWWNVHYKWPYPTEADKMALAETTGLDPKQINNWFINQRKRHWKPSESMQFASMD 310
            LL+WW+ HYKWPYP+E  K+ALAE+TGLD KQINNWFINQRKRHWKPSE MQF  MD
Sbjct: 301 QLLDWWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD 355

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g00740 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84JS6	9.2e-101	61.76	Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana OX=3702 GN=KNAT6 PE=1 ...	[more]
P46640	1.3e-94	58.23	Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana OX=3702 GN=KNAT2 PE=1 ...	[more]
Q9FP29	1.1e-74	56.85	Homeobox protein knotted-1-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=OS...	[more]
A2Y007	5.3e-72	52.81	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica OX=39946 GN=OSH...	[more]
Q7GDL5	5.3e-72	52.81	Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica OX=39947 GN=O...	[more]

BLAST of Cp4.1LG11g00740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023546842.1	1.29e-236	100.00	homeobox protein knotted-1-like 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022997562.1	2.80e-231	97.80	homeobox protein knotted-1-like 6 [Cucurbita maxima]	[more]
KAG7029210.1	1.09e-228	97.17	Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022961750.1	7.34e-225	96.24	homeobox protein knotted-1-like 6 [Cucurbita moschata] >XP_022961751.1 homeobox ...	[more]
KAG6598232.1	1.21e-210	96.72	Homeobox protein knotted-1-like 6, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cp4.1LG11g00740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K5E4	1.35e-231	97.80	homeobox protein knotted-1-like 6 OS=Cucurbita maxima OX=3661 GN=LOC111492452 PE...	[more]
A0A6J1HD67	3.55e-225	96.24	homeobox protein knotted-1-like 6 OS=Cucurbita moschata OX=3662 GN=LOC111462426 ...	[more]
A0A1S3BA77	2.04e-178	79.75	homeobox protein knotted-1-like 6 OS=Cucumis melo OX=3656 GN=LOC103487707 PE=4 S...	[more]
A0A6J1BPB0	2.22e-169	77.27	homeobox protein knotted-1-like 6 OS=Momordica charantia OX=3673 GN=LOC111004569...	[more]
A0A6J1B2J8	1.17e-141	65.40	homeobox protein knotted-1-like 6 OS=Herrania umbratica OX=108875 GN=LOC11042350...	[more]

BLAST of Cp4.1LG11g00740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23380.1	6.6e-102	61.76	KNOTTED1-like homeobox gene 6	[more]
AT1G23380.2	2.1e-100	61.37	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	9.2e-96	58.23	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT4G08150.1	1.4e-67	50.60	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G62360.1	1.4e-64	52.52	KNOX/ELK homeobox transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 78..122 e-value: 7.1E-22 score: 88.7
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 80..121 e-value: 5.1E-21 score: 74.2
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 128..179 e-value: 2.2E-24 score: 97.0
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 133..178 e-value: 1.7E-23 score: 81.9
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 216..237 e-value: 0.0012 score: 28.1
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 217..237 e-value: 5.0E-6 score: 26.5
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 238..303 e-value: 5.8E-12 score: 55.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 236..299 score: 12.470804
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 250..300 e-value: 2.10943E-12 score: 59.1793
None	No IPR available	GENE3D	1.10.10.60		coord: 235..309 e-value: 3.5E-27 score: 95.8
None	No IPR available	PANTHER	PTHR11850:SF305	HOMEOBOX PROTEIN KNOTTED-1-LIKE 2	coord: 72..317
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 72..317
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 256..295 e-value: 3.9E-17 score: 61.9
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 274..297
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 237..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g00740.1	Cp4.1LG11g00740.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding