Cp4.1LG10g12220 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g12220
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	E3 ubiquitin-protein ligase CHFR isoform X1
Location	Cp4.1LG10: 9315980 .. 9329239 (-)
RNA-Seq Expression	Cp4.1LG10g12220
Synteny	Cp4.1LG10g12220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCGATACAATTAGTCGATAAATGCTCCCACGTCGTAGTCATCAGCCGTTTACTTCACCTTCCTCCGCACGCTTCACAATTCTGCGTCTCTATTTATATTCGTAAAATTGTTTCATTTCAAGTTCTCAGAATCAGCAACATACTGGCGGTTATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAAGTATGTTTCCCCCTCTCACTTTGTTCTTCTCGGTATCTCTTTTCTTGGACTGATCCGATGCCTGTTCCGTCTTGCATTATTGGATTCTCTGTTTGATTTGCTTCTGCTCAGCGCTTGAGAGTTGGACAGTTTTGAAAACATAATCGTTCCATTTTTTGCAAGCAAAATTTGTTGCTATTCCAAATAAATGTTCTTTTGGGTTGAAATTATTCGGGAAGACAATGTAATTTGAGGAAATGATTTTTGGTGGAACGAGCAAATGAACTAGGTTTAGCGTTCTTGAAGGTCGATGATTTATTTGTATCTGATTTACTTCGATTTCGTGAATTGTTGGCAGTATGAGTTACAGAGATCAATCTCATTGTCTCACTAATTTTTCTATCGGTAGACAGTATAAGAATTAAGGAATTACTATTTTGGTGAAGATATACAAGAGGAAGAGGAGAGTGAACCTTTCTCCCCAATTAAACGATCATAAAATTGTTACAAGATCATACCTGCAAGGAACACTATCTAGCTACCAAAAAACGAATAAAGTGCTCAAAGTCTATGTAACCTCTCTGAATTTATGGAAATTATTACTTTAGACATTGTCTCGAGACATTCCCATACCTCATGGAAATTATTACTCTAGACATTATCTCGAGACGTTCCCATACCTCATGGAAATTATTACTTTAGACATTATCTTCTATGATGGAGAGAGAATTAGGGAAAATAATGGTTAATTCATTTTTAGTTTTCTATTTAGAGCTTAACTCTCTTTTTTAGTTTCTTTTGAGTTTAGTTTGCTTTTAATTCTCTGTAAATAGAGATATATTCTTCACAACTTTCATTCTAATAAAAATTCTAGACTTGATCCTTGTAGATTTCTCTTTTTAGTCACTTGATCATGGATTTGCATGAAAGAAACTTGATGGATTGAAGATATCATTCTTGAACATTTTTGTCATTTCTTAGATGATTTCGTTTTAAGAAACACTTCTTTCAAATTTTTATGTTGGTAATGTACAATTTCAATCTTTTTCTGAAAGGAGACACAAAACGTTCATTGACAAAATGAAAAATTACATATTAGATGTTGGCAAGCAGAATGGTTATTAAGTCTTTCATGGCGTAAAATGCAAACAAGAGGAGAAAGTACTCAAAAGCTTAATTTATTACAATCTTCTAATTTAAAAAAAAAAAAAAAAAACTATTGCAATCTAAATTGGCATTGTTTTTGGAAATTAATTTGCTATTTTATTTTATTCTTTTCCAGTTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGGTAATATGTTGTGGCTACGAAGTAATTAGTATTAAAATCAAATTATATTCTTATCCCATAAATCAGAGCCTCCATGCAGTTTGGTGTAGGTATTTTAAGATTTTTTATATAATGGTAAATCTTAAGAAAGATCTCCACTTTTACCATTAGAGACTCTCGTGGAGCTTTTATATCAAAGTTTGGTGTAGAGAACGGCTTAAAGTTCATGATTTTTCACTGATGTCAAGGATTATAGGGGTAGTAAGACCATGGGATTTAAGATAAAAATTTAGCCCAAATTCTTTACTGTAGTATCTAGGTGGATTGTTATTGAGAGAATTTTGTTTTTTTTATACGTATATATTCGTACATATCTATATATATATATATATACATACATAAAAATATTTATTGTTTTACGATCTCCCTCTCTTTGTCTCTCCTTTTCTCTTGCCGTATGTTTTATCTATTGTGTTTTGGGTGCTATAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGTTAGTATTTTTTCAAACTCTTGTGTGAAAGAGAAAGTTTAACGTGATGGATGAATTAGAATTATTTGTTTTCAATTTATTGAAATATAACAGGATGAAAGTTCTCACTAATTTGTTATATGAAAGTAAATTGTTTGTCATGCTAGTATATTGTTTACCGTGTTAGTATTTAATGTGCATAACTCGCGTTTGCTAAGATTTTTCCTTGTATATTTGTACTTTTTTTTATTTCTTTTCATATAGGTCTAGATTGATAGCTTAATGCTAGCATATATGATTGATAATTGTTCTATCTAAATTTATCTTTCACATCACTCAAAAAATGAGAAGTATTCTAGCAAATATTTTTGTAATCGTTTTGTATAAATTTGAGTCTTTCACATCACTCAAGAAACAAGAAATACTTTTCTCTCATACATAGCTTCACATTCATCAATACATTTCCTAAGTTTCCACTTTAAAAAGATACCATAGCTTTACAACACACTGATCCATTGAGAACTTAGCTTTACCACATAAGTATAATGAAAGAATAGATGAGATTGGTTTTCTACAGCTGAAAGGCAAAGACTGCAAGCTGATTGTTTTAATATTAAGTTGTTTTTTAACTTCACAAGCCAAGTCACTATATTGATTTTTCTTGGGCTCTTTGACTTAACAAAACTTATTCTTTTGTTCTTTTATATTAAACTTACTAATTCTTGTTATTTAAGCCGATTGGAGAATATATTATCCTCACCTTTGGTTTGACTTTGAATATTTTTTAGAATTTTTTTCTTATTCAAATATTCCCATAGATAAATACAAAATGTAACTGCACAAATATATTTTCTTTGTGGTTTGATTGAAAATGGAAAACTATCTCAGGTAAAAGCTTTTTCTTTGTTGAATTATTCCATTTTAATCTTTATGGAACTATTCAATTTTAATCTTCAGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGGTGATTGGTTAATTGTCATGTTTTGATTATCTAAATGTGCTATTAGCTTTCACCAATTGTTTTAGAAATACTCAATTTTAGCATCTGTTGAATTTGTCCAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGGTAGGGATATTTATTTGTTTCTAGCTGGTTATTTCACCTTTTAATTTAGGTGTTTTCATTGAATTGTAATTGGTCTACAGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGGTAATATCGTACCAAAGCATCTAAGTGAAGAAAAATGTTATTTGGTTTGCAGGATTTTGTCATAGAAGTATATATGTCTTGTAACACTTTTTTTTTTGCTGTATGAATTTTATGGGGATTAGTTTTGATTTTTGGGTTGATTAAAGGGTTGTATGAATTTTATGTAGTTGTTAAACAGAAACTTCAGGTTTTAGGAAAAAAAAAAAAAAACTGTAGTAAAGTTTAAAAGGGGAAAGCTTTAGAACTCACTACAGCACTTTAGATATCCACCAAGGGTTTTGGACTTCAATCTACAAGAAATATCTTTAAGGGTACTATTGTGTTTGGAGAGGAGTAAGGAGAAGACTTATCATAGAGACGTATTCTCTTTTTTTTTTGCCCCTTGAATGAAGGGCTTATTTCTCAATTCTCAACATTATTCTTTTCTCCTGGTGCAAACTTTTTTTTATTATTTATTATTTAATTTTATTGTCAAACAAAGGAAACAGTTCTTCATGTTGTGATGAAGAAAATTTTCGTAAGTGAAAGATCTCAATTCCCCTCAATGGAGGATGGCATAAAAGATTAAAAAATCCCAGTTTTAGTTAATTACGATTGGGGAGAGGATTTACGAAATTGCATTTGAAATTGAACACCAAAGTAGAGCAAGTATATATAGTAAGACCGCAACCTTTCTTTTACCGTCTATAAAGAGTGGATTTGATAATTTTGGCTCAAGCATCGGTGTCAAACATGCACACACATGGCTAATTAGCATGTCAAAGTTTTATATACTTATTTTTAATTATGACACTTGCACAGAAATGTCATGACACACTTATAACACGTATCAAACATGTGAATTAGTAAAGTAGTGTACTTGTGTTAGACACTATTTGTACAAAGTGATTATGAGCCCAACATCTGTTAGAAGTCATATTAAACACTTATTAAGCATAATAAATAAAAACACAAGTGGTAATATAGGACAAACCTATTAAATTTTGAGAGTGATACTTCAAACTCAATTTTAGGCATATCAATGTATTAACTCATTGACATATGAAGGTTCTTGTATAAAAATGATATATATTATAGTAAATGTATCCTTATCCTAAATGTTTTTAAAAAATGACGTGTGACCTAGTCCATGTTGTGTTCATCTATGTCTCGTTGTGTCTCGTATGTGTATCTATGCTTCTTAGCAGTCTGCTGCCTAGCGTCCCAGGGAAAGGAACTCTTTAAGCTATTTCTGCCAAACCATTTTTCTTCCCAGATGGAACCTTCATCCCCCAACTTTTTTCAGAAGGGAAGAATATATCTCATCTGCATTCTAATTTTCCCAACAACTCTTATTATTGTTTCCCATAATTTGTTTGATACTCAACCTGTACTCATCCTCATTAGCTTTAAACTTTTTGTAAAGTATATGTGAGGGTACTAATAGGGGATATGTTGGGAATACTAGTAGGATATCAGTAAGAACATAGTGATAATTGGCTAGGGGTGACTTGGTTATAAATGTAGAGAGCTTGGGATCTTAGAAGGGGGGGAATTATTTTGGGGAGGTTACAATACAGTTATTTTGTTGTATCTTGTAACCGATATCCTAACAGGATAAATATGGTTGATTTCCTAATTCCCCTGCATCAGTTCAGCAATTCTATAAACTTTAATCCCTGTTATACTATTTTTTTTTTTTCTTATTCTTTTCAGTTCTATCTCATAACTGATTGGCTGCTTGTTTTGTCTAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTAAGTAATCTTATTTTTTATCATACTTGTGTATTGATGTTATGACAACGATAGGAATGTCAATTTCTAAATTTTTAGTATTGACTTAAGGGAAATCTCCAACTGTAGCAAAAGAGAACTATTTTTTATGGAATGGCAGGGATGTGAATATCAGTGTAAAAATATTTTTTTACCTGGGGGAGGATGTGATTGTCAACATTTTAAGCAAGGTCAAAGGTTTTATGCTTTTCGTGAATTACAAGTGATATATATGCCTCTTATAGAATTTACTCAAGGGCTGGAATTGTTGCACTTTGGGGAATAGTTAGAATGGTAATTTCAATTTGCTGTATATTCTTTAAAAACATAGATTCTTCATTTTCTTTGTGGTCCGGTTCTTCCGATAAAATCGAAGTTATTGTTGGATATTGCTTCCAAAGCCAAGTCACCTTTATATAATCATTTTTAAAACAAATTTTACTTACAATTACAGCAAGGAGATGATTAAAATCCAATGCACTAAAACTTATTCAACAATGTGGTTCAAAATGTATTAATTTTTGTAAATTTGGACTTTAAAAGTTTTATGCTCTGGTTTTTTGTAATAAGAAACAAGGATTGTACTTCAAAATAGAATCATTGTACTAAAAAGGTGGAGAGGAATCACATCTCGAGAGGTAAAGGGTAAGGTCTTAGAGGCTTACTAGTGTATAGAGACAAGTTGCCTTTATCTCTTTTCAAGTTTGCTGACAACACCGCTTTAACGACACTCTTTTTCTACCTAGGGAAGAAGGAGTCTTATTAATCTAAACTGCATTATGTTTGTTTTAGACTTTTTCAAGGTTGAAGATTAATGGGGTAAATGTTTGTTGTGGGGGTTTACTGTGATCCTTCTAAATTAAGTAGGTAGGCTTCTTTGGTGGGTCGTGGGGTCTGGACCTTTCCATCAACTGAATGGGTCTTCCTCTTGGCCACAATCCTACACTTGGTATGTTTTGGGATCCTGTAGTGGAGAAAGGTCACAAGCATCTCTCCTATTGGAAAAAAGAGTTTTTTTCAAAGAAAGGTAGACTTAACCCTAATTCAGCCAGTTGCGAGGGATCTCAATGTTCTCTTTATTTAGGATTAAGGTGCCGATATGTAAATCCTTAGAGTATGAGGGACTTCTTGTGGGAAGGGTTAATGAAGGAAAAGGGTCTCACCTAGTGAACTAGTGTGTTGTGAATAAGTTGATGGTGCTCAAGGGGCTAGACATAGCTAATCTTAGCATGCAAAATGAAGCCTTTTTGGCTACATGGCTGTGGCGCTTTCCCAGGAGTCTAGCTTCCATTGGAAAAAGATTATTGTGAATAAATATGGTCTTCACCCTTTTGAGTCAATCTTGAGTGCAGTTCTAAAAGGCACTTCCAGATTGATTATGAGAAAGTTGCCTTGCTTGATAGGACTGCGATATTTGTATCTGTTGTAAGGGAGCAACTATGGACCTCAAACATCTTTTGTGGTCTTGTGATTACATGTGGGCAGTCTGGACTTGTTTCCTCCAGTCCTTTGGTCTCAACTTGGTCCAACCTAGAGAGGAATTTTTGCTTCATTCATCCTTTAGCAAAAAGGGTCACTTTTGTGGCTCTCCGACATTTGTGCTTTGTTATGTGGTTTTTGGGACATTTGTGCTTTGTTATGTGGTCTTTGGGGTGAGAGGATCAATAGAGTTTTTAGAGGAGTAGGGAGGTCCTAAGAAGAAGTTTGGTCCCTTGCTAGGTTCCATACCTCCCTTTCGGGCTTGGTGTGTAATGACTTTTGTAATTCCCCTTTAAATACTATCATCCTTGATTGGAGCCCTTTTCTTTATTTCGACTCCTTTGGGTTTGTTTTTTTTGTATGCCCTTGTATNAAGTATGGTTTCTCTTACCAAAAGAAAAAAGAAAAAAAAAAAAAGAAAGAAAACCCCTTTCTTAAAAATCTTTACAAAGTGAAGTTTCTTAAAACATTCTAGGCTTTTTTACATAGTTTTTCCCTACAAGATATATGTTTAAATAGGGACGCTCCTATATTTCCGTAGTCTTTTTTGCAAAATAAAGAACTGAAAGATGTTTTCAGTTAAAATCTTAGTGTATTTCTATTTTCTTTTTCCTTTTGTTTAGTTGTAATGATTTTCCCTTACAACCTTGAGGTGAAAATATTTCTCGATAAAAATCCCCAAGTAACTTCAGAGTTTACTGTCTTGACTCTTCAAAATTTTATTGCTTAATTATGATTAGTTGTCATTTTATGTAGCTTGCTCTTTGATTTTTTTGGTCTCGTTGTGCTTTTACTCCTTTTCTGCCCTAGTAGAAAATTGGAGGATTTGGGATGTTTATGCTCCTGATTTAAGATGGAAGAGCAAAGATTTGAAAAAAGAAACCATTATGCCCTTTCCTACAAAATTTTCATTGATAGTAGGTGAAAACTACGTATCATAGATAGTCTAAAAGAGAGAAAATTCAGGAACCACCAAATTATTGATATTTTCCCCCTTAAAGAGAACTGCCAATAACTGATTTTGGACAGGATGGATAGTTCTGGAAAGAGGTTTTGGAATAAAGATGCACCATTCCAAGAATATTCTTAAAGGGGAAGAAGTTGTAGACCATTTCTTGAAAATTTCCATACAACAAGAGAATATGAACTATTCATACAATTTAGAATCCCAACCTTTTGTTACAGACACGTTTTCTTTTAATACAATATACTAAAAAGGGAAGATCACAGGAAAATCAACATAACTTGACTAGTTAACCAAAACAGCGGGTTCTGGAGGACCAAATGAAATCCATGGAAAATTCCAGCATGTATCATATTAGTTATCACAGAAACAAAAGGATAAAGAGGTGCCCTTTTGGTAATTGATGTGGGAGTTCAGAAAGTTAAGGATCTCTCGACCTAACTTAGGTTCTCTAAGCCGTTAATAAAATAATATGGAATGCTACCCCAATTTATTTAAATCATCTCTAAGCTGTTGAGGGGTAGGCCGGATGGGAAGCCCAGATAGGAATGCCTAAAGAGGACAATATCTACTAGTGGTGGGCTTGGGCCGTTAATCTTCTACAGTAGGTTCTTTTTAAATTTGGCTTCGGAAGATCCAGATAGTTTCCTCTCTAGCCCTTTGCTTTTGGTTTGTGGTGTAAATTTCTTCAAGCTGTCAGTGTCAGCATCTCCCTCTTTTCGTTGGAGATGGGTTACTTTAATCCAAAATCCTCATAATTCTTTTGGATACGTGATCAGAGTAATTGGGGTAGTTTTGAGATTAAAATTTAGATGAAGCTGATATTTAGGTACTGTATTTTAATGCTTTTCTTTGTATGTGGACATTTTATTTTTGCAATGTTCCCCTTTTTTATTTGTCAGTTACTGTGGGTATACTTGTAGAACTCCCTACAGGTCTTTTTTATGGTTATTGTGCCATTTTGTTTTTAGTTTTCTTCTACTTTTTCCCTCAATCTCTTTGTACTTTCATCATTCTTACTTTATGATGAAAATTCGTATTGGTTTTTTATTTTCTCTGAGATGTTTAAGCTACAATCTTACCTCGTTGAGCATCAATCTTTTGTGCAGTTTACTTATTTTCAATCGTGTTGATTATGCTTGTAATTCTTCTAGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTAAATATTTGCTTTCAGTTGGAAAATCATCTTCCAACGCCTTTTTGTTCATTCTCATCGTTAGTGACTTTTCTATAATACTTTGCTCTAGTTGAATTATCACTAACCCCACCAGCTTAAATGGATATGTTGAGTATATATATATATATATATATATTTTTTTTTTTTTATATATATATTATTAACATTTTTCCTCACTTGTGAGCTAGAAAAATAATTTAACTCACGAAATTCATAAGTGAATTTTTAATATCAATTGGGAAGAAAACATTACAAGATTTGAACGCATTATCTTCTCAAAGAAAAATAAATGTACTTGGCTTCTTCTACCGTGCAATTAGTTTTAATAATTTCTAATTTATTCCTTTTCTGGAGTTCATAGATTTCCATTCATTGCATATCTAGAGTTTTCTACCATTCTGTTACATTTTATATAATCTGAAAAGTCGATTTACATTTTCCAGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTATGTTTGCATTTTCCCTTTATATTCTTTCTGTAATTATGATGTTTATATTAGCAACTTGTACTTATGATTTGTCAATACTCTATGGTGTAACTTAAGGCTGCTTACATTTATGGTAAGAGAGGGTTATTTTAGATTGGTGCATCCAACATTACTAAATACATTCATCATATCTATCTATCATTAGCGCATAGAGATTGCAGTATGATGTAAAGAATCACTTGGGTTGTCTTTTGTCTGGGTAAATATAGTTCAACAGACTCATTATTCTTTGTTGATGAAATTTGTTCATATAGTACGAAGTCAGAGATTATATTAACCTTAGATATGAGTGTAATGGTGATTAGTCTAATACAACGTTTCTATCTTTATTATTTTTATTTTAAATGTACAAGTTTGTGGACAATGGTCAGGAGACATGTAAAGAGGGGGAAATATTTAAAATTCAAATGCGGATGGGGCATCCTAGGATGTTTCAAAGTATAAGATTGTGAATTCCCACATCAGTTGGAGTGCTTCCTTAACAAGGGTGTGGAAACCTCCCCCTAGTAGATGCATTTTAAAAACCTTGAGGGGAAACCCGAAAGGGAATACCCAAAGAGAACAATATCTACTAGCGGTGGCCTTGAGCTGTTACGAATGGTATCAAAACCAGACACTGGGCGGTGTGACAACGATGACACTGGATCCCCAAGGGGGTGGATTGTGTGATCCCACCCTGGTTGGAGTGCTTCCTTGTAAGGGTGTAGAAATCTCCCCATAGTAGACGCGTTTTAAAAACCTTGAGGGGAAACCCGATATGAAAAACCCAAAGAGAACAATATCGGCTAGCAGTGAGTTTGGGTTGTTACAAGCTTAGGTATTTATATCTTTTTTCATGATCCAGTAGTTGGATGGCCACAAGAAGGACATCTTGAATTTAACATGATCGAACAAATCTCGTTGAGATTAATAATCCCGTCCGAAAAAAATAAAACTGCACCACGGAGGCCAACTTTTGTTGCTGAATATTTCATCCAATTATGAACTAGTAGATTTCTCTACCTTATATTTTACTGAGATTAAGTTTCCAAAGAAATTTGAACAAAACAAGGATTCAGAATTAAACTCTATGCAGAATTAACGTCTTCCATCTCTATTTTATATAGTTGTAAGCTTTTGTGTACATTGCAGGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGGTATGTGCTGTTATTGTTTGGTTTCTTTGTTTTCTTTTTCTTGTTTCAAAAGGATTCTGTCAAAGCTTGTTACCCCTTGTTGTTCTTACATTATTGGGCTAGCTAAATGATTCCGTTTCTATTTTACTTTGTAAAGGTTCTCTTATACTTAAATGTGTTCTTCATTGCAGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATGTATAGATTTGCATCTACTTATTCATTAAGCAGTTTTTCCAGTTTTGCTAATAGATAGTTGATATGATTCACATTTTGGTTCTTAGATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGGTAGGTTTTTTCCAACTTTCTTGTTATTTTTTTATTATTAGAAACTAAGAATGCTCTTATTATAGAAAATTATAAAAGGGAGAAAAAATATATAATGCTACTGACAGAAAGTTCCTAGGGATGATACCTTAAAACGTAAAAAAAACAAGACTAAAGAGAAATTGTGGGAGAGTATGCAATGATATTCATCATATAGTAATGGAGAACTTGTAGGAAAAATTGTTATCCCATTGGCATGCCTCGTGTGAGGGCACGAGTGGTCGAAATTATATTACGTATGTGAATATAGCGGCTTATTAGTCTTTTGTCCTTTATTGAAATTTTACTATATTTCACTATTCCTAGTCGAGAACTTTCATGTATACCTATATATATTAAACTCAAACATATAGACCGACATGGGTTCTTCCATATTTTGGTATCACATTAATAGAAATGTCCCTCATATAGTAGTCTTAAATTGCAAATCAGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAAGTAAGTCTTCTCATATTTCGTTCTTATTTTTCCACTTGATTCATGCAAGGAAATTGATGTCTTTTTCCACAGAAAGTATTGTATTTACTAGTTTATCTCTGCTTGAGGATACAGATCACCTCCCTTTTGTTTCTCTCGTTTGTTCTGTATAATTCTTGTACATGGATGGAAAGGGTCAAGTGCAATATGGGCATCATCATCTTCATCTTTCATCCTTCTGGGCTTCCCCTCAAAATTTTAAAACGCGTCTACTAGGAATTGGTTTCCACACCATTATAAAGAAAGTTTCATTCCCCTCTCCAACTAATGTGAGATCTCACAATCCACCCCGTTGGAGCCCTACGTCTTCACTGGTACACCGCCCGGTGTCTGCTCTAATACCATTTGTAACCGTCCAAGCCCACCGCTAGCAGATATTGTTCTCTTTGAGCTTTCTCTTTCAGATTTCCTCTCAAGATTTTTAAAATGGGTCTATTAGGGAGAGGTTTCCATACCCTTTAAAGAATGTTTCATTCCTCTCTCCAACCGACGTGGGATCTCACTAGAATGGCCTTATGAATTAGTCAGGTTATTAAGCTATAGTTTGCTAAAAAAAATCGTCTTCATTTCAAATGTGTATCTTGTCTCGTACCATTTCAGTTTAAAGCTGTTTTGGCATCCATTTTGACATGTAATACGTTCTGACAACTTGGAATGCCTTTTTGTCTCAATGAAGTGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATGTGAGTACTTTTGCCTGGGAATTTCAATTCTCCTTGCTTCTCCTTTCTAAATCCTACGTGAAATGTGGCAGCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGATAATAGCGATTTCTATATCTGCTTCACTTTTTCTTTCCCTTTTAACCATATTTTTCCCTAGTCTTCAGTGATGTGATCTTTGAATTACAAGCATATTTTTGTGCCCTTAATTGGTTGCAAATATGCCTCTTTGTATGTGTATATTATTACATTCTCAACAAATCATGTAAACTTTATTTATCAAAGTTATGCCTTTGGGCCTAACTTTGTTTGATGTTCTCTCAAAAGAAATGGCTGCATACATCCTCGTAGAAAATGGATTGTTCATATAACGTTTTCTTGGCCTGCAGATGTTATTCCCAGATTTGTTCACTTGCAGGCTTTGCCATTGCATGCTTGCGGCGTACTTGCCTTGTAAGAAAGCAACGGCTCAACATTTTTA

mRNA sequence

TGCGATACAATTAGTCGATAAATGCTCCCACGTCGTAGTCATCAGCCGTTTACTTCACCTTCCTCCGCACGCTTCACAATTCTGCGTCTCTATTTATATTCGTAAAATTGTTTCATTTCAAGTTCTCAGAATCAGCAACATACTGGCGGTTATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAATTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAATGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGATAATAGCGATTTCTATATCTGCTTCACTTTTTCTTTCCCTTTTAACCATATTTTTCCCTAGTCTTCAGTGATGTGATCTTTGAATTACAAGCATATTTTTGTGCCCTTAATTGGTTGCAAATATGCCTCTTTGTATGTGTATATTATTACATTCTCAACAAATCATGTAAACTTTATTTATCAAAGTTATGCCTTTGGGCCTAACTTTGTTTGATGTTCTCTCAAAAGAAATGGCTGCATACATCCTCGTAGAAAATGGATTGTTCATATAACGTTTTCTTGGCCTGCAGATGTTATTCCCAGATTTGTTCACTTGCAGGCTTTGCCATTGCATGCTTGCGGCGTACTTGCCTTGTAAGAAAGCAACGGCTCAACATTTTTA

Coding sequence (CDS)

ATGGCGGAAGTTGGAGAGTGCTCTGCTTCAAATTCCTCCATACAAAACTGGGCGAAGCTAATTTCACTTGATAAAAAATACGCAGATATTGAGATAAACTCGGATGAGGCTGTTATCTTCTCAGAGACAAAGTCCTCATCTGTTGATAAGTATGAATGGTGCAAAATCACAAGGAATTCCGATGTAAACTCTATCACTTTGCAGAATAGAAGTTTCAATGCTATTCTTGTTGATGAGACTCTTGTTCAAAAGGATGACATTGCTTTCATCAAGTGTGGAAGCGAAATTGTTTCTGGTTCGGTCCGAGATGGGCATTTGAGCTATAAATTTGAAATCTTGTCAGACTCAAGAATATGCAAGGGCTTAAAGATTTCTATGGATGTTGAACACGCAAAATGCAGTATTTGCTTAAACATTTGGCATGATGTTGTCACAGCTGCTCCTTGCTTTCACAACTTTTGCAATGGATGCTTCTCGGAGTGGTTAAAAAGATCCCAAGAGAAGCGTACAAGTGTACTTTGTCCCCAGTGTAGGGCAGTTGTGCAGTTTGTTGGAAGAAACCACTTCTTGCTGAACATTGCAGAGACTATATTGCAAGAGGACTCTTCCCTTAGACGTTCAGTCGAAGAAATTGCTATTTTGGATTCTTGTTCATTAATACAATCAAATCTGGTCATTGGGTCTGGGAAGAAGCGCACCCAGAAAAGGCCTCATTCAGTACTGGGCCAGGAGGAGAGCGGTGTCTTAGAGCTTCCATGCCCTCAATGTGGTACTGAATATGCTGGATTTCGTTGTAATCCAAACACGGTTCATCTACAATGTCATGGATGTGGAGGAATGATGCCTTCTCGATTTGATATTGGGATACCTCAACATTGTTTAGGATGTGATAGAGCATTTTGTGGTGCATATTGGCAAGCTCAGAGGTTACAAAGAAGTGGTACTTACGCCATGTGCAATCCCGAGACTCTAAAACCGATCTCCAGTCGTACCGTCTCAAGAATTCCACAGTTGACACATGAAAATAATCAACACGAACAGGATATTACAGAGAGGTGCATTAGTCAGATGGGTAAAACATTGCAGGATGTCATCTCTGAATGGATTGTGAAGTTTAACAATAGAGAAATTGATCGAACTCGAATGCCTCTAAACCACGTGGAGATGATAACTGCAGAGACGCATATTTGCAATGAGTGTTATGACAAATTGGTGGGATTTCTACTCTACTGGTTTCGCATTTCAACGCCAAAATATCTTCTTCCAGGAGATGCAACTGAAAGGGAAAATTGTTGGTATGGATATGCATGTCGGACTCAACACCACAACGAAGATCACGCTCGCAAGCGAAACCATGTTTGTCGTCCCACCCGATCCCGATGA

Protein sequence

MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNSDVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR

Homology

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot
Match: A5WW08 (E3 ubiquitin-protein ligase CHFR OS=Danio rerio OX=7955 GN=chfr PE=2 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 6.7e-28
Identity = 97/384 (25.26%), Postives = 152/384 (39.58%), Query Frame = 0


Query: 129 EHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNH 188
           E   C IC ++ +D ++  PC H FC  C+S W++RS        CP CR  V+ + +NH
Sbjct: 273 ESLTCIICQDLLYDCISVQPCMHTFCAACYSGWMERSS------FCPTCRCPVERIRKNH 332

Query: 189 FLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHS-----VLGQ 248
            L N+ E  L +     R+ +++  +D+ + I  +++    ++       S      L  
Sbjct: 333 ILNNLVEAYLLQHPEKCRTEDDLRSMDARNKITQDMLQPKVERSFSDEEASSDYLFELSD 392

Query: 249 EESGVLELP-----CPQCG---------------------TEYAG--------------- 308
            +S + ++      C QC                       + AG               
Sbjct: 393 NDSDISDMSQPYMMCRQCPGYRKELSSALWICESAQSESLAKTAGDGPSTSSDSTTAAPQ 452

Query: 309 -FRCNPNTVHLQCHGCGGMMPSRFDIGI-----PQHCLGCDRAFCGAYWQAQRLQRSGTY 368
            FRC P   HL C  C   MP R    +     PQHCL C + FC  YW   R+   G  
Sbjct: 453 EFRCPPQASHLICTCCLQPMPDRRFEHLPPQVSPQHCLVCQKPFCHVYWGCPRIGCHGCL 512

Query: 369 AMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQDVISEWIVKFNNRE 428
           A  +   L         +        NQ+E ++ +  +S  G + + ++ +         
Sbjct: 513 ARFSELNLN-------DKCLDGVFNGNQYESEVLQNYLSCRGMSWRHLLQD--------S 572

Query: 429 IDRTRMPLNHVE--MITAETHICNECYDKLVGFLLYWFRISTPKYLLPGDATERENCWYG 459
           +   +  L H+    ITA + +C  C  +    L Y +R   P   LP   T R NC++G
Sbjct: 573 LQALQQGLYHLSDYRITANSFLCYCCGLRTFRELAYKYRERIPPSELPDAVTNRPNCYWG 632

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot
Match: Q810L3 (E3 ubiquitin-protein ligase CHFR OS=Mus musculus OX=10090 GN=Chfr PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-27
Identity = 109/420 (25.95%), Postives = 165/420 (39.29%), Query Frame = 0


Query: 103 DGHLSYKFEILSDSRICKGLKISMDVEHAK-----------CSICLNIWHDVVTAAPCFH 162
           DG L    ++L   +       S DV+ A            C IC ++ HD V+  PC H
Sbjct: 262 DGELDTNLQLLVSGQRGNAQTSSEDVKDASVKPDKMEETLTCIICQDLLHDCVSLQPCMH 321

Query: 163 NFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEI 222
            FC  C+S W++RS       LCP CR  V+ + +NH L N+ E  L +     RS E++
Sbjct: 322 TFCAACYSGWMERSS------LCPTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDV 381

Query: 223 AILDSCSLIQSNLV-----------IGSGKKRTQ-----------KRPHSVLGQ----EE 282
             +D+ + I  +++            GS +   +            +P+ V  Q      
Sbjct: 382 RSMDARNKITQDMLQPKVRRSFSDEEGSSEDLLELSDVDSESSDISQPYIVCRQCPEYRR 441

Query: 283 SGVLELPCPQCGTEYAG---------------------FRCNPNTVHLQCHGCGGMMPSR 342
             V  LPCP   +E                        + C     H  C  C   MP R
Sbjct: 442 QAVQSLPCPVPESELGATLALGGEAPSTSASLPTAAPDYMCPLQGSHAICTCCFQPMPDR 501

Query: 343 -----FDIGI-PQHCLGCDRAFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQL 402
                 D  + PQ C  C + FC  YW      R+G +    P     +  + +  +   
Sbjct: 502 RAEREQDPRVAPQQCAVCLQPFCHLYWGC---TRTGCFGCLAPFCELNLGDKCLDGV--- 561

Query: 403 THENNQHEQDITERCISQMGKTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICN 459
              NN +E DI +  ++  G T + V++E ++      + R    L+    IT  T +C 
Sbjct: 562 -LNNNNYESDILKNYLATRGLTWKSVLTESLL-----ALQRGVFMLSDYR-ITGNTVLCY 621

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot
Match: Q96EP1 (E3 ubiquitin-protein ligase CHFR OS=Homo sapiens OX=9606 GN=CHFR PE=1 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 6.3e-26
Identity = 103/396 (26.01%), Postives = 159/396 (40.15%), Query Frame = 0


Query: 115 DSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLC 174
           D R   G    M+ E   C IC ++ HD V+  PC H FC  C+S W++RS       LC
Sbjct: 287 DVRAAAGKPDKME-ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LC 346

Query: 175 PQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV--------- 234
           P CR  V+ + +NH L N+ E  L +     RS E++  +D+ + I  +++         
Sbjct: 347 PTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFS 406

Query: 235 --IGSG-----------------------------KKRTQKRPHSVLGQEESGVLEL--P 294
              GS                              +++  + PH    + E G  +    
Sbjct: 407 DEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPHCPAPEGEPGAPQALGD 466

Query: 295 CPQCG----TEYAGFRCNPNTVHLQCHGCGGMMPSR-----FDIGI-PQHCLGCDRAFCG 354
            P       T    + C     H  C  C   MP R      D  + PQ C  C + FC 
Sbjct: 467 APSTSVSLTTAVQDYVCPLQGSHALCTCCFQPMPDRRAEREQDPRVAPQQCAVCLQPFCH 526

Query: 355 AYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQ 414
            YW      R+G Y    P     +  + +  +      NN +E DI +  ++  G T +
Sbjct: 527 LYWGC---TRTGCYGCLAPFCELNLGDKCLDGV----LNNNSYESDILKNYLATRGLTWK 586

Query: 415 DVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLP 459
           ++++E +V      + R    L+    +T +T +C  C  +    L Y +R + P   LP
Sbjct: 587 NMLTESLV-----ALQRGVFLLSDYR-VTGDTVLCYCCGLRSFRELTYQYRQNIPASELP 646

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot
Match: Q5FWP4 (E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis OX=8355 GN=chfr PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.8e-25
Identity = 99/396 (25.00%), Postives = 148/396 (37.37%), Query Frame = 0


Query: 114 SDSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVL 173
           SD      +K     E   C IC  + HD V+  PC H FC  C+S W++RS       L
Sbjct: 247 SDESKTPSMKPDKMEETLTCIICQELLHDCVSLQPCMHTFCAACYSGWMERSS------L 306

Query: 174 CPQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV-------- 233
           CP CR  V+ + +NH L N+ E  L +     RS E+   +D+ + I  +++        
Sbjct: 307 CPTCRCPVERICKNHILNNLVEAYLIQHPEKCRSEEDRCSMDARNKITQDMLQPKVRRSF 366

Query: 234 ---------------------------------IGSGKKRTQKRPHSVLGQEESGVLELP 293
                                             G  +   Q  P+      E+   +  
Sbjct: 367 SDEEGSSEDLLELSDVDSESSDISQPYTVCRQCPGFVRHSMQPPPYPPPSDTETSRTQGD 426

Query: 294 CPQCGTEY----AGFRCNPNTVHLQCHGCGGMMPSR------FDIGIPQHCLGCDRAFCG 353
            P   T +      + C  +  H+ C  C   MP R           PQ C  C   FC 
Sbjct: 427 APSTSTNFPTATQEYVCPSHGSHVICTCCFQPMPDRRAEREHNSHVAPQQCTICLEPFCH 486

Query: 354 AYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQ 413
            YW   R+   G +    P     +  + +  +      NN +E DI +  ++  G T +
Sbjct: 487 MYWGCNRM---GCFGCLAPFCELNLGDKCLDGV----LNNNNYESDILKNYLASRGLTWK 546

Query: 414 DVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLP 459
           D+++E +       + R    L     I   T +C  C  +    L Y +R + P   LP
Sbjct: 547 DMLNESLA-----AVQRGVFMLPDYR-INGTTVLCYFCGLRNFRILTYQYRQNIPASELP 606

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot
Match: Q5RF77 (E3 ubiquitin-protein ligase CHFR OS=Pongo abelii OX=9601 GN=CHFR PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 2.4e-25
Identity = 102/395 (25.82%), Postives = 156/395 (39.49%), Query Frame = 0


Query: 115 DSRICKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLC 174
           D R   G    M+ E   C IC ++ HD V+  PC H FC  C+S W++RS       LC
Sbjct: 195 DVRAAAGKPDKME-ETLTCIICQDLLHDCVSLQPCMHTFCAACYSGWMERSS------LC 254

Query: 175 PQCRAVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLV--------- 234
           P CR  V+ + +NH L N+ E  L +     RS E++  +D+ + I  +++         
Sbjct: 255 PTCRCPVERICKNHILNNLVEAYLIQHPDKSRSEEDVQSMDARNKITQDMLQPKVRRSFS 314

Query: 235 --IGSGKKRTQ-----------KRPHSVLGQ----EESGVLELPCPQ------------- 294
              GS +   +            +P+ V  Q            PCP              
Sbjct: 315 DEEGSSEDLLELSDVDSESSDISQPYVVCRQCPEYRRQAAQPPPCPAPEGEPGVPQALVD 374

Query: 295 ------CGTEYAGFRCNPNTVHLQCHGCGGMMPSR------FDIGIPQHCLGCDRAFCGA 354
                   T    + C     H  C  C   MP R           PQ C  C + FC  
Sbjct: 375 APSTSVSLTTVQDYVCPLQGSHALCTCCFQPMPDRRAEREQNPRVAPQQCAVCLQPFCHL 434

Query: 355 YWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQD 414
           YW      R+G +    P     +  + +  +      NN +E DI +  ++  G T ++
Sbjct: 435 YWGC---TRTGCFGCLAPFCELNLGDKCLDGV----LNNNSYESDILKNYLATRGLTWKN 494

Query: 415 VISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLPG 459
           +++E +V      + R    L+    +T +T +C  C  +    L Y +R + P   LP 
Sbjct: 495 MLTESLV-----ALQRGVFLLSDYR-VTGDTILCYCCGLRSFRELTYQYRQNIPASELPV 554

[Close]

BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: XP_023543045.1 (E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 963 bits (2489), Expect = 0.0
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]

BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: XP_022933097.1 (E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita moschata])

HSP 1 Score: 952 bits (2461), Expect = 0.0
Identity = 452/460 (98.26%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS++CK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSKVCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHTKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQRLQRSGTYA CNPETLKPISSRT+SRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWRAQRLQRSGTYATCNPETLKPISSRTISRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]

BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: KAG6603167.1 (E3 ubiquitin-protein ligase CHFR, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 949 bits (2454), Expect = 0.0
Identity = 453/460 (98.48%), Postives = 456/460 (99.13%), Query Frame = 0


Query: 1    MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
            MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 782  MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 841

Query: 61   DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
            DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS+I K
Sbjct: 842  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSKIYK 901

Query: 121  GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
            GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 902  GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 961

Query: 181  VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
            VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHS+
Sbjct: 962  VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSI 1021

Query: 241  LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
            LGQEESGVLELPCPQCGTEYAGFRCNPN VHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 1022 LGQEESGVLELPCPQCGTEYAGFRCNPNAVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 1081

Query: 301  CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
            CGAYWQAQRLQRSGTYA CNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 1082 CGAYWQAQRLQRSGTYATCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 1141

Query: 361  LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
            LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 1142 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 1201

Query: 421  LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
            LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 1202 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 1241

[Close]

BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: XP_022967793.1 (E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita maxima])

HSP 1 Score: 946 bits (2446), Expect = 0.0
Identity = 452/460 (98.26%), Postives = 455/460 (98.91%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS ICK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSIICK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQRLQRSGTYA CNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG T
Sbjct: 301 CGAYWQAQRLQRSGTYATCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGTT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVK NNREIDRTRMPLNHVEMITAETH+CNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKLNNREIDRTRMPLNHVEMITAETHMCNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYG+ACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGHACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]

BLAST of Cp4.1LG10g12220 vs. NCBI nr
Match: XP_023543046.1 (E3 ubiquitin-protein ligase CHFR isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 939 bits (2426), Expect = 0.0
Identity = 451/460 (98.04%), Postives = 452/460 (98.26%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKL        +IEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKL--------NIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 452

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL
Match: A0A6J1EYT3 (E3 ubiquitin-protein ligase CHFR isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439866 PE=4 SV=1)

HSP 1 Score: 952 bits (2461), Expect = 0.0
Identity = 452/460 (98.26%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS++CK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSKVCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHTKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQRLQRSGTYA CNPETLKPISSRT+SRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWRAQRLQRSGTYATCNPETLKPISSRTISRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL
Match: A0A6J1HW48 (E3 ubiquitin-protein ligase CHFR isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467202 PE=4 SV=1)

HSP 1 Score: 946 bits (2446), Expect = 0.0
Identity = 452/460 (98.26%), Postives = 455/460 (98.91%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS ICK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSIICK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQRLQRSGTYA CNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG T
Sbjct: 301 CGAYWQAQRLQRSGTYATCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGTT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVK NNREIDRTRMPLNHVEMITAETH+CNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKLNNREIDRTRMPLNHVEMITAETHMCNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYG+ACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGHACRTQHHNEDHARKRNHVCRPTRSR 460

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL
Match: A0A6J1F3R3 (E3 ubiquitin-protein ligase CHFR isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111439866 PE=4 SV=1)

HSP 1 Score: 928 bits (2398), Expect = 0.0
Identity = 443/460 (96.30%), Postives = 449/460 (97.61%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKL        +IEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKL--------NIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS++CK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSKVCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHTKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQRLQRSGTYA CNPETLKPISSRT+SRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWRAQRLQRSGTYATCNPETLKPISSRTISRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 452

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL
Match: A0A6J1HXR4 (E3 ubiquitin-protein ligase CHFR isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467202 PE=4 SV=1)

HSP 1 Score: 922 bits (2383), Expect = 0.0
Identity = 443/460 (96.30%), Postives = 447/460 (97.17%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKL        +IEINSDEAVIFSETKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKL--------NIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS ICK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSIICK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYWQAQRLQRSGTYA CNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG T
Sbjct: 301 CGAYWQAQRLQRSGTYATCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGTT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVK NNREIDRTRMPLNHVEMITAETH+CNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKLNNREIDRTRMPLNHVEMITAETHMCNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYG+ACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGHACRTQHHNEDHARKRNHVCRPTRSR 452

[Close]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL
Match: A0A6J1EYT0 (E3 ubiquitin-protein ligase CHFR isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111439866 PE=4 SV=1)

HSP 1 Score: 900 bits (2325), Expect = 0.0
Identity = 430/460 (93.48%), Postives = 436/460 (94.78%), Query Frame = 0


Query: 1   MAEVGECSASNSSIQNWAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 60
           MAEVGECSASNSSIQNWAKL                     +TKSSSVDKYEWCKITRNS
Sbjct: 1   MAEVGECSASNSSIQNWAKL---------------------KTKSSSVDKYEWCKITRNS 60

Query: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEILSDSRICK 120
           DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSG V+DGHLSYKFEILSDS++CK
Sbjct: 61  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGPVQDGHLSYKFEILSDSKVCK 120

Query: 121 GLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180
           GLKISMDVEH KCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV
Sbjct: 121 GLKISMDVEHTKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAV 180

Query: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240
           VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV
Sbjct: 181 VQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSV 240

Query: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300
           LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF
Sbjct: 241 LGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAF 300

Query: 301 CGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKT 360
           CGAYW+AQRLQRSGTYA CNPETLKPISSRT+SRIPQLTHENNQHEQDITERCISQMGKT
Sbjct: 301 CGAYWRAQRLQRSGTYATCNPETLKPISSRTISRIPQLTHENNQHEQDITERCISQMGKT 360

Query: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420
           LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL
Sbjct: 361 LQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYL 420

Query: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 460
           LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR
Sbjct: 421 LPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTRSR 439

[Close]

BLAST of Cp4.1LG10g12220 vs. TAIR 10
Match: AT1G47570.1 (RING/U-box superfamily protein )

HSP 1 Score: 580.5 bits (1495), Expect = 1.2e-165
Identity = 274/460 (59.57%), Postives = 341/460 (74.13%), Query Frame = 0


Query: 2   AEVGECSASNSSIQN-WAKLISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNS 61
           AE G+ S S  S  + WAKL+ LD +++DIEI  ++ VI SE K SS++K+EWC+IT+N 
Sbjct: 5   AETGQSSGSKPSDDDAWAKLVPLDTRFSDIEIRCNDMVICSEIKPSSLEKHEWCRITKNL 64

Query: 62  DVNSITLQNRSFNAILVDETLVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEIL--SDSRI 121
             +S T+ N+S +AILVD+ +V KD    I  GSEIV G    G+L Y+F I+   +SR 
Sbjct: 65  GQSSATIHNKSSDAILVDKAVVPKDGAVDIISGSEIVPGPEEQGYLQYRFTIMPAPESR- 124

Query: 122 CKGLKISMDVEHAKCSICLNIWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCR 181
            + L+IS+D EHAKCSICLNIWHDVVTAAPC HNFCNGCFSEW++RS+EK   VLCPQCR
Sbjct: 125 TQLLQISIDPEHAKCSICLNIWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCR 184

Query: 182 AVVQFVGRNHFLLNIAETILQEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPH 241
             VQ+VG+NHFL NI E IL+ D++LRR  E+IA+LDS + IQSNL+IGS +KR    P 
Sbjct: 185 TTVQYVGKNHFLKNIQEEILKVDAALRRPAEDIAVLDSSASIQSNLIIGSKRKRRLNMPA 244

Query: 242 SVLGQEESGVLELPCPQCGTEYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDR 301
                EE   L L CPQC     G+RC  +  HLQCH C GMMP R ++ +P HC GCDR
Sbjct: 245 PT--HEERDSLRLQCPQCVANIGGYRCEHHGAHLQCHLCQGMMPFRANLQVPLHCKGCDR 304

Query: 302 AFCGAYWQAQRLQRSGTYAMCNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMG 361
            FCGAYW ++ + +  +  +C  ET +PIS RT++RIP +THE N+HEQDIT+RCI+ M 
Sbjct: 305 PFCGAYWSSENVTQGVSGPVCVRETFRPISERTITRIPFITHEMNRHEQDITQRCIAHME 364

Query: 362 KTLQDVISEWIVKFNNREIDRTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPK 421
           KT+ DV++EW+  FNNREIDR+RMPLNH E ITA TH+CN+CYDKLVGFLLYWFRI+ P+
Sbjct: 365 KTVPDVVAEWLRLFNNREIDRSRMPLNHAETITASTHVCNDCYDKLVGFLLYWFRITLPR 424

Query: 422 YLLPGDATERENCWYGYACRTQHHNEDHARKRNHVCRPTR 459
             LP D   RE+CWYGYACRTQHHNEDHARKRNHVCRPTR
Sbjct: 425 NHLPADVAAREDCWYGYACRTQHHNEDHARKRNHVCRPTR 461

[Close]

BLAST of Cp4.1LG10g12220 vs. TAIR 10
Match: AT1G47570.2 (RING/U-box superfamily protein )

HSP 1 Score: 566.6 bits (1459), Expect = 1.8e-161
Identity = 264/440 (60.00%), Postives = 329/440 (74.77%), Query Frame = 0


Query: 21  ISLDKKYADIEINSDEAVIFSETKSSSVDKYEWCKITRNSDVNSITLQNRSFNAILVDET 80
           + LD +++DIEI  ++ VI SE K SS++K+EWC+IT+N   +S T+ N+S +AILVD+ 
Sbjct: 12  VPLDTRFSDIEIRCNDMVICSEIKPSSLEKHEWCRITKNLGQSSATIHNKSSDAILVDKA 71

Query: 81  LVQKDDIAFIKCGSEIVSGSVRDGHLSYKFEIL--SDSRICKGLKISMDVEHAKCSICLN 140
           +V KD    I  GSEIV G    G+L Y+F I+   +SR  + L+IS+D EHAKCSICLN
Sbjct: 72  VVPKDGAVDIISGSEIVPGPEEQGYLQYRFTIMPAPESR-TQLLQISIDPEHAKCSICLN 131

Query: 141 IWHDVVTAAPCFHNFCNGCFSEWLKRSQEKRTSVLCPQCRAVVQFVGRNHFLLNIAETIL 200
           IWHDVVTAAPC HNFCNGCFSEW++RS+EK   VLCPQCR  VQ+VG+NHFL NI E IL
Sbjct: 132 IWHDVVTAAPCLHNFCNGCFSEWMRRSEEKHKHVLCPQCRTTVQYVGKNHFLKNIQEEIL 191

Query: 201 QEDSSLRRSVEEIAILDSCSLIQSNLVIGSGKKRTQKRPHSVLGQEESGVLELPCPQCGT 260
           + D++LRR  E+IA+LDS + IQSNL+IGS +KR    P      EE   L L CPQC  
Sbjct: 192 KVDAALRRPAEDIAVLDSSASIQSNLIIGSKRKRRLNMPAPT--HEERDSLRLQCPQCVA 251

Query: 261 EYAGFRCNPNTVHLQCHGCGGMMPSRFDIGIPQHCLGCDRAFCGAYWQAQRLQRSGTYAM 320
              G+RC  +  HLQCH C GMMP R ++ +P HC GCDR FCGAYW ++ + +  +  +
Sbjct: 252 NIGGYRCEHHGAHLQCHLCQGMMPFRANLQVPLHCKGCDRPFCGAYWSSENVTQGVSGPV 311

Query: 321 CNPETLKPISSRTVSRIPQLTHENNQHEQDITERCISQMGKTLQDVISEWIVKFNNREID 380
           C  ET +PIS RT++RIP +THE N+HEQDIT+RCI+ M KT+ DV++EW+  FNNREID
Sbjct: 312 CVRETFRPISERTITRIPFITHEMNRHEQDITQRCIAHMEKTVPDVVAEWLRLFNNREID 371

Query: 381 RTRMPLNHVEMITAETHICNECYDKLVGFLLYWFRISTPKYLLPGDATERENCWYGYACR 440
           R+RMPLNH E ITA TH+CN+CYDKLVGFLLYWFRI+ P+  LP D   RE+CWYGYACR
Sbjct: 372 RSRMPLNHAETITASTHVCNDCYDKLVGFLLYWFRITLPRNHLPADVAAREDCWYGYACR 431

Query: 441 TQHHNEDHARKRNHVCRPTR 459
           TQHHNEDHARKRNHVCRPTR
Sbjct: 432 TQHHNEDHARKRNHVCRPTR 448

[Close]

BLAST of Cp4.1LG10g12220 vs. TAIR 10
Match: AT3G05250.1 (RING/U-box superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.1e-04
Identity = 18/50 (36.00%), Postives = 27/50 (54.00%), Query Frame = 0


Query: 133 CSICLNIWHDVVTAAPCFHNFCNGCFSEWLK----RSQEKRTSVLCPQCR 179
           C ICL  +        CFH FC  C  +W+K    ++ ++R+SV CP C+
Sbjct: 22  CPICLGQFLRESYLDTCFHKFCFNCIKQWIKVVSSKASKQRSSVTCPLCK 71

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g12220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5WW08	6.7e-28	25.26	E3 ubiquitin-protein ligase CHFR OS=Danio rerio OX=7955 GN=chfr PE=2 SV=1	[more]
Q810L3	2.5e-27	25.95	E3 ubiquitin-protein ligase CHFR OS=Mus musculus OX=10090 GN=Chfr PE=1 SV=1	[more]
Q96EP1	6.3e-26	26.01	E3 ubiquitin-protein ligase CHFR OS=Homo sapiens OX=9606 GN=CHFR PE=1 SV=2	[more]
Q5FWP4	1.8e-25	25.00	E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis OX=8355 GN=chfr PE=1 SV=1	[more]
Q5RF77	2.4e-25	25.82	E3 ubiquitin-protein ligase CHFR OS=Pongo abelii OX=9601 GN=CHFR PE=2 SV=1	[more]

BLAST of Cp4.1LG10g12220 vs. NCBI nr


Match Name	Identity	Description
XP_023543045.1	100.00	E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022933097.1	98.26	E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita moschata]	[more]
KAG6603167.1	98.48	E3 ubiquitin-protein ligase CHFR, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022967793.1	98.26	E3 ubiquitin-protein ligase CHFR isoform X1 [Cucurbita maxima]	[more]
XP_023543046.1	98.04	E3 ubiquitin-protein ligase CHFR isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Cp4.1LG10g12220 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1EYT3	98.26	E3 ubiquitin-protein ligase CHFR isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HW48	98.26	E3 ubiquitin-protein ligase CHFR isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1F3R3	96.30	E3 ubiquitin-protein ligase CHFR isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1HXR4	96.30	E3 ubiquitin-protein ligase CHFR isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1EYT0	93.48	E3 ubiquitin-protein ligase CHFR isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Cp4.1LG10g12220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G47570.1	1.2e-165	59.57	RING/U-box superfamily protein	[more]
AT1G47570.2	1.8e-161	60.00	RING/U-box superfamily protein	[more]
AT3G05250.1	3.1e-04	36.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 133..177 e-value: 7.3E-6 score: 35.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 133..178 score: 12.149959
IPR040909	E3 ubiquitin-protein ligase CHFR, cysteine rich domain with multizinc binding	PFAM	PF17979	zf-CRD	coord: 253..415 e-value: 1.6E-51 score: 174.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 123..215 e-value: 8.2E-15 score: 56.4
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 133..177 e-value: 9.7E-8 score: 31.8
None	No IPR available	GENE3D	3.30.40.140		coord: 216..311 e-value: 6.3E-12 score: 48.1
None	No IPR available	PANTHER	PTHR16079	UBIQUITIN LIGASE PROTEIN CHFR	coord: 3..458
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 132..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g12220.1	Cp4.1LG10g12220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding