Cp4.1LG10g11620 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCATTTTAAACTGCCGATTGCTCCAGCTTCAATCTTCCGATTTTCTCTTCACAATTTTCGGATTCAAAATTCTTGACTCGTTCTCATCTCCTCATCACATCTACGGCACGCCCTGCTGCCGATCTCTCCTCCTTCCCCGTCGATCTTCTTCCTGTTTCCCAATCTCTCTGTCTCCCTCTGAGGTTCATCGCTTGGAAAATCGAATCAATCTGACGGTTCGTTGATTCTGCAGCTCAATCGGTATGTCTGTGTCTCAGTCTTTCTCTCAATCTTGGCTTCTGTGCTCATTTTAAATGGAATTTCATGGTGGAGGCTGTTCAAACGTGTCTTAGTACTTCTACCGTTTGGTAGAGTTGTGAAAAATGAAGGCATATGTTCACTATAATTGATCATTGTTATTAGGTCACTCCGATGTCTTTTTTTACGTGTTTTAATTTGATTCCTTTGCGTTCTTCAGTTTTCTTTTTTTCGGTTTTGTTGCAACGTGATTTGCTTGATGTTCATGTGCATAATTTTGAATATTTGATGATTTATTCATGGTTGCTTTGGCTGTATTGTGAATTTTCTTGCTGAATTACTTTTGAGCAAAACTTATCACGATCTAATCCAATTCTATGGGGTTTGGTTTGATAAATTGGGAGATTGTGTCCTGAAATGGCTTCAGATTGATTCTTCCCAAACTTATAGCGTTTCACGAATCGTACCTATTGAAGATTGTTGGGAGGGAGTTCCACATTGGCTAATTTAGGATCATGGGTTTACAAGTAAGAAATACTATTTCCATTGGTACGAGGGTTTTGGGAAAACCAAAAGCAAAGTCACGAGAGCTTTTGCGCTCAAAGTGGATATTATACTATTGTAGAGATCCGTGATTCTTAACATGGTATTAGAGCCATGCCCTTAATTTAGCCATGTAAGTAGAATCCTCAAATGTCATAACAAAGAAGTTGTGAGCCTCGAAGCTATAGTAAAAAAGTGACTCAAGTGTTGAACAAATGGTGTATTTTGATCGAGGGTTCCAGAGAAGGAGTCGAACCTCGATTAAGGGGAGTCTGTTCAGAGGCTTTTCAAGTCTCAGAGAAGGCTTTATGATGTACTTTTTTCAAGAGGATTGTTGGGAGGAAGTCTCACCTTGGCTAATTTAAGAGGTTAATCATGAGTTTATAAGTAAGGAATACTATCTCTATTAATTATTGGTACGAAGTCTTTTGGGAAAACCAAAAGAGAGCTTATGCCCAAAGTGGACAATATTATACTATTGTGGAGATTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGTCGTAGTTCCCAACAACACTACACGCTAAAAGTTTCCTTGTTAAATCTATATATTTTCTGAAATTTCAAACTTATAACCTTTGATGTAATTCTGCGTATGATATGGTTGATTTGATTTGGGAACATATTAGTCCATTGCAGTTAGAAGATGGCAGCAAAATACATAGTAGTTTCTACACTTGGAGCATTTGCATTTGCTTATATTTCTGATAATCTTGTTGCTGACAAGAAAATATTTGGAGGTAACAATCGGTCCTCATCATTTGGCTTTGCAGTTTCTTGCTCTATTCTCTTAATTTCTTGCTCTTTTCAATGGATTTCTTGTTCAGGAACAACCCCGAGTACTGTTTTAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACCGCCGGCCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATTGTCAAAACCCGCTCTGAACCTTAAATGTTGCTTTGGTTGTCTATTTATACAATTTTGATTGGATAATTCTGCTTTTGGAAGTACTTCTTAGTCATTAAGCAGTTCTAACCTGCCTTCATATTTGATGAGGGGAACTGAAGGAATTGTTGTTGAGCTGATAGCCTTTTTTTATTCTTCCTGTTTAAGTTGCATCATTGGCTTGTTTGCTATGTTGATGGTGTCAGGATGTTGATTCTGAATAAATCAGTGAAATGGGAAACTTCTCTTCCATGTCTCTTTCAGATGATGTAGAATGATCACTGTTCTTATTTATTTACTTTCATAAATCTTTTTCCATAGTTGATCACTTTCTATAGTTGTATAATTATTAGAATCTCACTTCGATTAAAGAGGGAAACGAAGCATTCCTTGTAAAAGTGTGGAAACCACTCCCTGGTGTACACGTTTTAAAAAACCTTGAGGAGAAGCTGAGAAGGGAAAGCCCAAAGACATATCTATTGGTGGTGGACTTGGACGGTTACATGGGTGCATAATCCAACCTTTGACACATGGGTTGGAGTGAAATACCAACACACCTATATTGTCCGTGACACATGCATGTGTCATAGGGTAGCTCACTTAGGCCACAGGGTATAGGGGTGATGGAGAGTTAGCACCATGTCACTCCTTATCGTACATTTTGAGGCATTTCCAATCCTTCTCGAGTAGATGTC TGCATTTTAAACTGCCGATTGCTCCAGCTTCAATCTTCCGATTTTCTCTTCACAATTTTCGGATTCAAAATTCTTGACTCGTTCTCATCTCCTCATCACATCTACGGCACGCCCTGCTGCCGATCTCTCCTCCTTCCCCGTCGATCTTCTTCCTGTTTCCCAATCTCTCTGTCTCCCTCTGAGGTTCATCGCTTGGAAAATCGAATCAATCTGACGGTTCGTTGATTCTGCAGCTCAATCGTTAGAAGATGGCAGCAAAATACATAGTAGTTTCTACACTTGGAGCATTTGCATTTGCTTATATTTCTGATAATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCGAGTACTGTTTTAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACCGCCGGCCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATTGTCAAAACCCGCTCTGAACCTTAAATGTTGCTTTGGTTGTCTATTTATACAATTTTGATTGGATAATTCTGCTTTTGGAAGTACTTCTTAGTCATTAAGCAGTTCTAACCTGCCTTCATATTTGATGAGGGGAACTGAAGGAATTGTTGTTGAGCTGATAGCCTTTTTTTATTCTTCCTGTTTAAGTTGCATCATTGGCTTGTTTGCTATGTTGATGGTGTCAGGATGTTGATTCTGAATAAATCAGTGAAATGGGAAACTTCTCTTCCATGTCTCTTTCAGATGATGTAGAATGATCACTGTTCTTATTTATTTACTTTCATAAATCTTTTTCCATAGTTGATCACTTTCTATAGTTGTATAATTATTAGAATCTCACTTCGATTAAAGAGGGAAACGAAGCATTCCTTGTAAAAGTGTGGAAACCACTCCCTGGTGTACACGTTTTAAAAAACCTTGAGGAGAAGCTGAGAAGGGAAAGCCCAAAGACATATCTATTGGTGGTGGACTTGGACGGTTACATGGGTGCATAATCCAACCTTTGACACATGGGTTGGAGTGAAATACCAACACACCTATATTGTCCGTGACACATGCATGTGTCATAGGGTAGCTCACTTAGGCCACAGGGTATAGGGGTGATGGAGAGTTAGCACCATGTCACTCCTTATCGTACATTTTGAGGCATTTCCAATCCTTCTCGAGTAGATGTC ATGGCAGCAAAATACATAGTAGTTTCTACACTTGGAGCATTTGCATTTGCTTATATTTCTGATAATCTTGTTGCTGACAAGAAAATATTTGGAGGAACAACCCCGAGTACTGTTTTAAACAGCGAGTGGTGGGAAGAAACTGACAAGAAATTCCAAGCATGGCCTCGTACCGCCGGCCCACCTGTGGTCATGAACCCCATCAGTCGCCAGAATTTCATTGTCAAAACCCGCTCTGAACCTTAA MAAKYIVVSTLGAFAFAYISDNLVADKKIFGGTTPSTVLNSEWWEETDKKFQAWPRTAGPPVVMNPISRQNFIVKTRSEP Homology
BLAST of Cp4.1LG10g11620 vs. NCBI nr
Match: XP_023544258.1 (uncharacterized protein LOC111803886 [Cucurbita pepo subsp. pepo] >XP_023544259.1 uncharacterized protein LOC111803886 [Cucurbita pepo subsp. pepo] >XP_023544260.1 uncharacterized protein LOC111803886 [Cucurbita pepo subsp. pepo] >XP_023544262.1 uncharacterized protein LOC111803886 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 166 bits (419), Expect = 1.29e-51 Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. NCBI nr
Match: XP_022967931.1 (uncharacterized protein LOC111467297 [Cucurbita maxima] >XP_022967932.1 uncharacterized protein LOC111467297 [Cucurbita maxima]) HSP 1 Score: 159 bits (403), Expect = 3.57e-49 Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. NCBI nr
Match: XP_022928693.1 (uncharacterized protein LOC111435531 [Cucurbita moschata] >XP_022928694.1 uncharacterized protein LOC111435531 [Cucurbita moschata] >XP_022928695.1 uncharacterized protein LOC111435531 [Cucurbita moschata] >XP_022928696.1 uncharacterized protein LOC111435531 [Cucurbita moschata] >KAG7033528.1 hypothetical protein SDJN02_03250 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 156 bits (394), Expect = 8.44e-48 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. NCBI nr
Match: KAG6603220.1 (40S ribosomal protein S28, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156 bits (394), Expect = 2.26e-46 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. NCBI nr
Match: XP_022966506.1 (uncharacterized protein LOC111466138 [Cucurbita maxima]) HSP 1 Score: 145 bits (365), Expect = 2.25e-43 Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. ExPASy TrEMBL
Match: A0A6J1HS56 (uncharacterized protein LOC111467297 OS=Cucurbita maxima OX=3661 GN=LOC111467297 PE=4 SV=1) HSP 1 Score: 159 bits (403), Expect = 1.73e-49 Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. ExPASy TrEMBL
Match: A0A6J1EPT4 (uncharacterized protein LOC111435531 OS=Cucurbita moschata OX=3662 GN=LOC111435531 PE=4 SV=1) HSP 1 Score: 156 bits (394), Expect = 4.08e-48 Identity = 76/79 (96.20%), Postives = 77/79 (97.47%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. ExPASy TrEMBL
Match: A0A6J1HPI7 (uncharacterized protein LOC111466138 OS=Cucurbita maxima OX=3661 GN=LOC111466138 PE=4 SV=1) HSP 1 Score: 145 bits (365), Expect = 1.09e-43 Identity = 68/79 (86.08%), Postives = 72/79 (91.14%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. ExPASy TrEMBL
Match: A0A6J1EBA8 (uncharacterized protein LOC111432556 OS=Cucurbita moschata OX=3662 GN=LOC111432556 PE=4 SV=1) HSP 1 Score: 142 bits (357), Expect = 1.81e-42 Identity = 66/79 (83.54%), Postives = 71/79 (89.87%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. ExPASy TrEMBL
Match: A0A5A7UM13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00430 PE=4 SV=1) HSP 1 Score: 140 bits (353), Expect = 7.17e-42 Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. TAIR 10
Match: AT1G01170.1 (Protein of unknown function (DUF1138) ) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-29 Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. TAIR 10
Match: AT1G01170.2 (Protein of unknown function (DUF1138) ) HSP 1 Score: 125.2 bits (313), Expect = 2.4e-29 Identity = 55/77 (71.43%), Postives = 64/77 (83.12%), Query Frame = 0
BLAST of Cp4.1LG10g11620 vs. TAIR 10
Match: AT4G00860.1 (Protein of unknown function (DUF1138) ) HSP 1 Score: 104.8 bits (260), Expect = 3.4e-23 Identity = 45/77 (58.44%), Postives = 58/77 (75.32%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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