Cp4.1LG10g10230 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g10230
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	SNF1-related protein kinase regulatory subunit beta-2-like
Location	Cp4.1LG10: 4228079 .. 4237158 (+)
RNA-Seq Expression	Cp4.1LG10g10230
Synteny	Cp4.1LG10g10230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAATTAAAAATATAATCTCCATCAAAAGAGATTAACGAACTGCACAATATTCAAAGCAGTGGGGCGAGTTGCGCCGACGTGGGCGCCCGGTAGCCTCATAGATTTTGGAAATAGTGGTTAAGAGTGTCATTTTCGTATTAATTTTTGGGTATCAATCAAAGGGAATCGACTAGTCCAAACCAACTCCCAGAAAATTAAGCAGAACAACGAGGAATTGGAGCAATACAGGAGACTGCGGAGGCTCAATGATCAGATCCCTTTTGTTTTCTTCCGCTCTTGTGCCGATTTTCAGAACCACTCGGACATCTCCCTCCAACTTTCTGGGATTTCATTGCCTCCCTTTCTCTGCCACTGCTCGCTTTACACTTGTATCTGTTCTTCACTGCCCAGGTTCTGATTTTCATATTTGTGTCCTTGTCTCTCGATTTAGTGACGTTAATGGACCTGAAAATTTGAGATGTTTTATTAATGGTTCTTGGGTTCTTCGTAAACTTTGGTTGTTATGTAGGAGTTGGAGGTTCTGGTACATTGATTATTAATGTGTTGCGTTTATGTTGCCTGTCTAGAACGATGAAACGAGTGTTTGGCTAACTTGTAGTTCACTCTCGATTGTATCAATCAGTTTAAATGTTTGTCTTGCTGTTGTTTGGTTATGTTTACAATACCCATCTGGGAGTCATAGTTTTGGAACCAACTCAGTTATCTTGATACAATAAGAGCTCAACCTCACTGCTAAAGAATGCTTTGTTAGGGAGAGATTTCCATACCCTTATAAACAATATTTTTCCCTCTGTAACCGATGTAGGGTCTCATAATTCACCTTCTACGGGGCCAGTGTCATTGTTGTCACACCATCCGGTGTCCACCATCTTTTAGGGCTCAGCGTCCTTTCTGTCACACCGCCTGATGTCTGACTCTGATACCATTTGTAACAGCACAAGTTCACCGTTAATAGATATGGTCCTTTTTGAGCTTTTCCTTTCGAACTTTCCTTCAAGGTTTCTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACTTTTATAAAGAATGTTTTGTTCCCTCTCCAAACAAGATGGGATGTTACACATTCCACCAGCTTCTGTTTTTCACACTGTTTTATGGATTCAGTGAATGAGAATCCACTGAACTGTTCCTGTAATGGAGAGTTTAGCATGAAACTAATTGGTTCTTATGTTATAGGCATTGGGGTCAGAAATCCAGCTTCTTTTTGCAGCAATTCCCTTTCAGTTTCTGCTAAGTCAACATTGTTTATGGAGGAAGTCCCAGCTGCAAATGAGGTTCAACTGGTTGAAGTACTTGATGCAACCAACGATGATCATGGAGGCGTTCTCGTGGAAATGGATAAACCTATGGACTCTGAGGTCTTTGTGCCCATCCTTAGAGCTTCAATTTCACATTGGAAACAACAGGTTGATGAGTTCAGTAGTAAACTTTTCTGCCCCTTTTGTTTACACACCTTCAAATGCTATCAGGACATGCTTACTCCATCTTCATTTCTTTGTCAACTGGACTATGGTAGGCAAGCTTTTGCTTCAAATTTTAATGCCGCTCTAAGAAGTAATGAATGTTTGTTTTGGATTTTGATACATCTGCCATTTCTTTTGACTTCCTTCTTGAGCATGTGATCTCCACCATCCGAACGGCTAGTAGATATCGTTACGTATCGCTGTTAGTCTCACGGTTTTAAAACGCATCTACTAAGAAGAAGTTTCCACACCCTTATAAGTAATGTTTCGTTCTCCTCTCCAACCAATGTGCGATCTCATAATCTACTCCCCTCGAGAGCGTAGTGTCTTCTCTAGCACACCACCCAGTGTTTGGCTCTAATTCCATTTGTAACAGTCCAAACCCACTACTAGTAGATATTGTCCACTTTGGCTTGTTACGTATCGCCGTCAGCCTCACAGTTTTAAAATGTGTCTACTAGGGAGGGGCTTCCACACCCTTATAAGAAATGTTTCGTTCTACTCTCCAACCAATGTGGGATATCACAATCCACCCCCTCGAGAGCCCAGTGTTCTCGCTGGCACACCACCCGATGTCTGGCTTTAATATCATTTATAATAGCCCAAGCCCACCGCTAAGAGATATTGTCTGCTTTGACCCGTTACGTGTTGCTGTCAGCCTCACGGTTTTAAAACGCGTCTACTAGGGAGAAGTTTCTACACCCTTATTAGGAATGTTTCGTTCTCCTCTCCAACTAATGTGAGATATCACAATCCACCCCCCTCAAGAGCCCTATGTCCTTGCTGGCATACTGTTCGTTATCTGACTCTAATATCATTTATAACAGCCCAAGCCCACCGTTAGTAAATATTGTCTGCTTTGGCCTGTTAGTACCGCCGTCAACCTCACGGCTTTAAAACGCGTCTACTAGGAGAGGTTTACGTACCCTTATAACGAATGTTTCGTTCTCCTCTCCAATCAATGTGGGATCTCTAAATGAATTTTCATTGAGACTCCCATAGCGTTGAAAATTGTCCTCTGTACCAGAGAATTCAGTGTTCTTTTGCTCCAATGCTGGTTTGTATCATTTGCATGAAGATACTCTGGCGCTGTGTCAACTAAACTATTCATATTTTCTCCTGTTTATATTCATGATGAGCAAATCTTTTGCAGGGCAAAAAAGGTGTATGGCTTAAACTGCCCATTGAGCTTGCTAACCTGGTTGAAGCTGTTGTTAAGGTGATATTCTGATAACAGTTCTTTAGATCGTTTTAACAGTAGATTTAGGAACTCGCACTTTCAAGTGCTGCAAGTAATTGTTCCTATTCTCTATTCTTTCCCTTCTTTTAGGAAGGATTCTGGTATCACCACGCAGAGCCAAAGTATTTGATGCTAGTGTACTGGATACCTGAATGTGCTCATACTCTTCCTGTCAATGCTACCCATCGAGTTGGCGTTGGTGCGTTTGTTTTGAACGACAATAAAGAGGTACGAAGCATTTCTTGTAAGGGTGTGGAAACCTCTCCCTAGTAGATGCGTTTTAAACTCGTGAGGCTAACAACAATATGTAACGAGCCCAAACGGACAATATCTATTAGTGGTGGGCTTGAGCTGTTACATCTTGGGTTTGTTGTTCCTCGTCTGAATCTATGTTGTAACTTTTGTTATAGGTACTCGTGGTTCAGGAAAAGAGTGGAGTGTTACGAGGGACTGGTGTATGGAAGTTTCCCACAGGAGTTGTAGATGAGGTAAAGAGTTTTGGATACGCTCTGATTCCATTTCTGCATATAAATATAACTAAAATCTTTGAGTTGCTTCATTTGACGGTATCAAGGGGGAAGATATATGCAAAGCTGCTGAGAGGGAAGTGAGAGAAGAGACTGGTGTAAGTTAAATAAGCTGCATGATCAAATAAAGCTATATTATCTGCTCATCAGTTGTTCATCATGTTTGTCTCAGTAAGAGTTATCTTAAAGTTTCCAGGTTTATTCTTCTACAGATTGACACAGAATTCGTGGAAGTTTTAGCGTTCAGGTATGAAGTTACACTTATCAGCCCGTGTCCACCGCTATTAGATATTTTCTGTTTTGGTTCGTTACGTATAGCCGTCAGCCTCACGATTTTAAAACACGTCTGCTAGGGAGAGGTTTCTACACCCTTATTAGAATACTTTGTTCCTCTCTCCAACCGAAGTGAGATCTCACAATTTACCCTCTTTGGGGCTCAACGTTCTCCCTTCCAACTAATGTGGGATCTCACAAGGGCCCTGCGTCCTCCCTGATACTCGTTCCCTTTTCCTACCAATGTGGGATCTCAAAAGGGCCCAGTGTACTCCCTGGCACTCGTTCAGTGTCTGGCTCAGATACCATTTGTAATATTTCAAGCCCACTGCTAGCAGATATTGTTCGATTTGGCCCGTTGCGTATAACCGTCGGCCTCACGGTTTTAAAACGCGTCTGCTAGGGAAAGTGTCCACACCCTTGTATAAAGAATGCTTTGTTCCCCTGTTCCCCTTTCCAACCGATGTGGGATCTCACAATCCACCCTCTTTGGGGCCAGCGTTCTCCCTGACACTTGTTCTCCTCTCCAACCAATGTGGGAGCTCACAAGGGCGCATCGTCCTCCCTGACACTCATTCGGTGTCTGGCTCTGATACCATTTTGTTACGGCACAAGCTCACCACTAGCAGATATTGTCCCCTTTGGCCGGTTACGTTATAGTCGTTAGCCTCACAGTTTTAAAACGCGTCTGTTAGGGAGATGTTTCCACACTCTTACAAAAAATGCTTCTTTCCCCTCTCCAACCGAGGTGGGATCTCACACTAACATTCTTTTTACTATTTTATATCCCATTCAAATTTTTGCAGACAGACTCACCAAGCATTCTTTGGGAAATCAGATCTGTTCTTCGTTTGCGCATTGAAACCTCTAACCTTTGAAATAAGCAAGCAAGAACTCGAGATAGAGGATGCGCAGGTACGTCCCGGTTCACTAGGCAATGTTTATACTTTACACCGACATGTCGATGTAACAGATCGAATCGGCTCTTAGTAAGCATAAGCTACAAACTTGATGCGCATATCATAGTACAACATCATCAGTTGTCTTAGAAACTTTTAGACCTGTCTGAGTGTTCTAAATATTTCTGGTGAAATAACCATCTTTTCTAGTCAGTTCAATTGCAATGCTGAATAGTCCTTACAATTGTTGCAACCATTGTCGTTGCAGTGGATGAAACTCGAGGACTACACCGCTCAACCGTTACTCCAAAAACACGAAGTATGGAAGTGTATCAACAACATTTGTGTCACAAAGATTCAGCAGCAGTATTCTGGATTTTCTCCTGTGCTCACTTCCACAGCGTTTTCGAGCAAACAAAACTTCTTGTACCTAAACGAACACGACATGAGCAGGCGGTGAGGTCTCGTCGTCAATCCTTGATTGATACATTTTGCCAAGTAGCATCAATCTTGTTTCTTTGCTTCTTAATCTTTTCTAGCTATTGGACCATACCCTTGTTTCTGATACTCAAAACTGCATAAGTTCACACTTTCAGTGATTTCAAAATACATTGCTATAATTTTCTATGCAGTTTCTGATAGAATTTAAAGTGGAACTATGAATTTGACTGCTGTGTTCTAATTTGATTCAAAAAGCTATATAATTAAACGATACTCATTTCAAACGATCATGATGTACAAGAACTTTCAAGATTCCAAATGAGAAACAAAGGGTAAATTCCCATAAACCAAGAAGAAAAAGAAAGGCAAAGAGTAATAAGTTCGTGTGGAATGAATAAAAGTATAAAACTTTGTCATTTTCACTGCAAACCCAGTTTGGGTTCATTTTGGAAAGATGTGATTTTGATGAGTAAAAGGGAAGAAAGAAGTGGCAGCCACGATTGAGGAAAAGAAAGCATCAAAGGGAAGCTGTAAATTAGCTAAAGTAAATGGATGGAGGCCATGGGTGGGGATCGGGAGCAGGACTTTGTCAACCATGACGTGACGATGATTCCTGTTATCCTTAAAAGCCCATCAACCTTGGGCCACCATTCGATCTTCCTGACTCATCGGAGAAAAGATTAAGAAGGTTAATCTTTGCGCTTTGTTCTTTTTAGCATCCTTCTCGTAAGAACACATATCCAAATCCTTCAATTTGTTTGGGTTTTCAATTTTATCCCACTTTGATTTCCTTGCAATTTCTGCGGATGAACTATGAATCTTAGGATTATGAGGGTTTCTCTGTTTATGTCGTCCCTAATCACTTGATTGTTCTTATTCTGTGGAGAATCCTTTTTCCACCCATTTTCATTCTTTTTCGCCCACCCACAAAGGATTCCGGGTTTATTTATTTATTTATTTATTTATTTACTTTCCATTTATTCTTGTTCGTATTAATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTGAGTTAGTTCCCTGAATTTTGCCTTTCATTCCTGGTCGTGAATTCCTCCAGTTCATTGAAAATTGATATACGGTGGGGATGTTTAGTGTTGTATGTAATTGGAAATTCCTTTCGTTTCCTTTTTCGATAAGTTTCTGTGAGGAATCTTGGCCTTTTCGTGTCGCTACTTTACCTGCACGGTATGTGTTTGATGTAAGTCCTACATGAATAGATGGACGATTTGGTGAATCTACAGGGCTATTGTTACACTATAATTCTCTGTTCAAATTCGATCGACTGCCTCTATCTTTTTATCTTCCCATTACAGTGTTGTGTTGTATAAGCTTTCTTGAATCTTTGTTCAGAATGCATCTTGATTTTAGGGTTCCATTTTATCATGGAATTCTTCTACTTATACTTCTAGGAAGATGAAAATATCACTCTGTCATCCTCTCAATCTGGGAAATTGTTGGTTAAATTATACAAAATACGCTTGAACTTTGGTGTAGATTTCAATCATGAAAAAGCACCTTTGATAGTTTAATGTATTTATAAAAACTCGAAAGCGTTCATAGCATCATTTACGATTCAAGCTCAACTATATAGAAGATTAAGATCATTGTTAGTTTCAAGTTAAAAGATGTTCATTTCGTTAACTCAACCAACATGAACGATATTATAAACGATGGCGTACAAATTTTCATTCACCATTTTAATGAAAAAGTCTCTATAGGTATATTTTGGAACAGTTTCAATATTATAACTCATCTAACTTGCAAATTCATTTTGAATGCGTAGAAAGATACCCATTTTGGATTCTGGAAAACAGACAAAGATGCTGTTGAGCTATTACCACAATGTTCCTCTTTAGTTTTGATCAATAATGTTACTATAGATTGAGCTGTGAATCATTCTGTGATCTCTGCACTGGTTTCTTTTCTTCAGTGTCTGACCTTCTGTCATTGCGAGCTATGATTTTGAGTACTTCTATCTGTCTTAACAGGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAGTTTGTTGCTCTATTCTCTCAATTTGTAGTTCGTTTCTTACTCGATTGACTGACCGCCATCTGATACCCAATGTCTTCTTGCTGATCAGAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTATTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGTAAAAATCTCTTTCTTGCTGACCATCTCATACCCTCTTACTATCCTGATATGAAAGTTGTCGATGAAACTCGGTTTCGTGAGATGCATGAAAGTTGATCATTTTGGTTATTTTTGTTTAAATTTACCAACAAGTATGGAGCTTTCTGATCTAGTATTCAGGGTTGAGAGTCAAATTCCTCTCATTCAACCGCCCAACCCCACCACTAGCAGATATTGTCCTCTTTTGACTTTTCCTTTCGGGCTTCCCTCAAGGTTTTTAAAACACGTCTACTAGGGAGAGGTTTCGACGTGCTCATAAAGAATGCTTCGTTCTCCTCCCCAATGTGGAATCTCACAATCCATCCCCCTTTGGGTCCCAGCATTCTCGCGGGCACTCTTTCCCTTCTCCAATTGATGTGGGACTCCCTCATCCACCTCCCTTTGGGGTCCAGCGTCCTTGCTGACACACTGCCTCATGTCCACCCTCCTTCTGGGCTCAGCCTCCTCGCTGGCCCATCGCCCAATGTCCGACTCTGATACCATTTGTAACAACCCAAACTCACCACTAGCAGATATTTTCCTCTCTGGGCTTTTCCTTTCGAGCTTCCTCCCAAAGTTTTTAAAACACATCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGTTTCGTTCTACTCCCCAACCAATGTGGATGACTCTCTCTCGTTTTTAGTCAAGATAACTTTGCACTTTGTTGAGTTTCAAGCATGTGTTTATACCATCATGGATGACTCTCTCTCGTTTTTAGTCAAGAAGCTTGATAATCAACCGAGCTCAATTTACGCTAATCTGACACTTTGATGCAGCATGTGATATATATATTGCAAAAATAATCGTGTTTTTTTCTTTCATATCTGGGTGTTGTATTTGGAATAATAGAAAGCTTGTAGAGCTTATTTTTTAATGGATGAATGTTATAGGACTATGTCCCAGAAGACATCGAAAGCATTTCCAGCTTTGAACCTCCTCCGTCCCCAGAGTCAAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCCTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGTAGCTTTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTAAATCAACCAGGAAGTCTGAGTGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCTTTTTATCTAACATGCATTTTAACCAGTTGCTAAAATTTCCTCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCATTTGTCTCAATGGTTGCAAGTTTTGCTAATGAATACAAATGTAGCGTTTGTAATAGTTCAAGC

mRNA sequence

TTTAATTAAAAATATAATCTCCATCAAAAGAGATTAACGAACTGCACAATATTCAAAGCAGTGGGGCGAGTTGCGCCGACGTGGGCGCCCGGTAGCCTCATAGATTTTGGAAATAGTGGTTAAGAGTGTCATTTTCGTATTAATTTTTGGGTATCAATCAAAGGGAATCGACTAGTCCAAACCAACTCCCAGAAAATTAAGCAGAACAACGAGGAATTGGAGCAATACAGGAGACTGCGGAGGCTCAATGATCAGATCCCTTTTGTTTTCTTCCGCTCTTGTGCCGATTTTCAGAACCACTCGGACATCTCCCTCCAACTTTCTGGGATTTCATTGCCTCCCTTTCTCTGCCACTGCTCGCTTTACACTTGTATCTGTTCTTCACTGCCCAGGCATTGGGGTCAGAAATCCAGCTTCTTTTTGCAGCAATTCCCTTTCAGTTTCTGCTAAGTCAACATTGTTTATGGAGGAAGTCCCAGCTGCAAATGAGGTTCAACTGGTTGAAGTACTTGATGCAACCAACGATGATCATGGAGGCGTTCTCGTGGAAATGGATAAACCTATGGACTCTGAGGTCTTTGTGCCCATCCTTAGAGCTTCAATTTCACATTGGAAACAACAGGGCAAAAAAGGTGTATGGCTTAAACTGCCCATTGAGCTTGCTAACCTGGTTGAAGCTGTTGTTAAGGAAGGATTCTGGTATCACCACGCAGAGCCAAAGTATTTGATGCTAGTGTACTGGATACCTGAATGTGCTCATACTCTTCCTGTCAATGCTACCCATCGAGTTGGCGTTGGTGCGTTTGTTTTGAACGACAATAAAGAGGTACTCGTGGTTCAGGAAAAGAGTGGAGTGTTACGAGGGACTGGTGTATGGAAGTTTCCCACAGGAGTTGTAGATGAGGGGGAAGATATATGCAAAGCTGCTGAGAGGGAAGTGAGAGAAGAGACTGGTATTGACACAGAATTCGTGGAAGTTTTAGCGTTCAGACAGACTCACCAAGCATTCTTTGGGAAATCAGATCTGTTCTTCGTTTGCGCATTGAAACCTCTAACCTTTGAAATAAGCAAGCAAGAACTCGAGATAGAGGATGCGCAGTGGATGAAACTCGAGGACTACACCGCTCAACCGTTACTCCAAAAACACGAAGTATGGAAGTGTATCAACAACATTTGTGTCACAAAGATTCAGCAGCAGTATTCTGGATTTTCTCCTGTGCTCACTTCCACAGCGTTTTCGAGCAAACAAAACTTCTTGTACCTAAACGAACACGACATGAGCAGGCGGTGAGGTCTCGTCGTCAATCCTTGATTGATACATTTTGCCAAGTAGCATCAATCTTGTTTCTTTGCTTCTTAATCTTTTCTAGCTATTGGACCATACCCTTGTTTCTGATACTCAAAACTGCATAAGTTCACACTTTCAGTGATTTCAAAATACATTGCTATAATTTTCTATGCAGTTTCTGATAGAATTTAAAGTGGAACTATGAATTTGACTGCTGTGTTCTAATTTGATTCAAAAAGCTATATAATTAAACGATACTCATTTCAAACGATCATGATGTACAAGAACTTTCAAGATTCCAAATGAGAAACAAAGGGTAAATTCCCATAAACCAAGAAGAAAAAGAAAGGCAAAGAGTAATAAGTTCGTGTGGAATGAATAAAAGTATAAAACTTTGTCATTTTCACTGCAAACCCAGTTTGGGTTCATTTTGGAAAGATGTGATTTTGATGAGTAAAAGGGAAGAAAGAAGTGGCAGCCACGATTGAGGAAAAGAAAGCATCAAAGGGAAGCTGTAAATTAGCTAAAGTAAATGGATGGAGGCCATGGGTGGGGATCGGGAGCAGGACTTTGTCAACCATGACGTGACGATGATTCCTGTTATCCTTAAAAGCCCATCAACCTTGGGCCACCATTCGATCTTCCTGACTCATCGGAGAAAAGATTAAGAAGGTTAATCTTTGCGCTTTGTTCTTTTTAGCATCCTTCTCGTAAGAACACATATCCAAATCCTTCAATTTGTTTGGGTTTTCAATTTTATCCCACTTTGATTTCCTTGCAATTTCTGCGGATGAACTATGAATCTTAGGATTATGAGGGTTTCTCTGTTTATGTCGTCCCTAATCACTTGATTGTTCTTATTCTGTGGAGAATCCTTTTTCCACCCATTTTCATTCTTTTTCGCCCACCCACAAAGGATTCCGGGTTTATTTATTTATTTATTTATTTATTTACTTTCCATTTATTCTTGTTCGTATTAATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTATTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCCAGCTTTGAACCTCCTCCGTCCCCAGAGTCAAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCCTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAGAATAGGCATCCTGTGTAATCAAATTCACAATCTAAACCCATTTTTCCTTACTGTAGCTTTATATGGTGTCGATGCCATTTCGTTTAAACACTTCTAAATCAACCAGGAAGTCTGAGTGGATCGTTCTTCAAGATTGTACCTTACATAATACCATCTCTCTTTTTATCTAACATGCATTTTAACCAGTTGCTAAAATTTCCTCTTCCTTGTAGCAGGATCATCTCACTCCCTCTCCCATTTGTCTCAATGGTTGCAAGTTTTGCTAATGAATACAAATGTAGCGTTTGTAATAGTTCAAGC

Coding sequence (CDS)

ATGGGGAATGTGAACGGGAGAGAAGATGAGGACGCTAATCCATCTGGGGTTGAAGAAGAAGATGAAGAAGTCGGTAGCCGACGGAGGAGTTTGCCGGACGGCCTGGCTGCGCCTCCTGATGCTCACCTTGACTACCTCACTGGCGATCCGCCTACAGAGCTGATGGGTCATTCTCCTCCTCGTAGCCCTCGCGCCATTCCATCTCCATTGATGTTTACTCCCCAAGTACCGGTTGTTCCACTGCCAAGACCTGATGAGTTGCCCAATTCAAGCGAGTCCTGGATGAATAACAGTTCGTTGTTTGACGACGTGAGCAGTGAACAAGGAATCCCAACGATGATTACCTGGAGTCATGGAGGCAAGGAAGTAGCTGTTGAGGGATCTTGGGACAACTGGAAATCGAAAATACCGTTGCAGAGATCTGGGAAGGACTTCACGATTATGAAGGTATTGTCTTCTGGTGTTTACCAGTATAGGTTTATTGCTGATGGACAATGGAGATATGCTCCTGACTTGCCTTGGGCCCAAGATGATGCAGGCAATGCTTACAATATCTTGGACTTGCAGGACTATGTCCCAGAAGACATCGAAAGCATTTCCAGCTTTGAACCTCCTCCGTCCCCAGAGTCAAGTTACAGCAGTTTGCAGCTTGGATCTGAAGATTTTTCAAAGGAGCCACCACTGGCTCCTCCCCACTTGAAAACCACACTGCTCGACATGCCCTCCCCATACAATGAAATCTTACCTCCTATATCAAGACCTCAGCATGTTGTGCTGAATCATCTTTACATGCAGAAGGAAAGGGGTGGCCCCTCCGTCGTCGCACTCGGGATGACTCACCGGTTCCTTGCCAAGTACGTAACCGTCGTGCTCTATAAATCCTTGCAGAGACAACGTTAG

Protein sequence

MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR

Homology

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 4.3e-108
Identity = 201/299 (67.22%), Postives = 240/299 (80.27%), Query Frame = 0


Query: 1   MGNVNGREDEDA-NPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSP 60
           MGNVN RE+ ++ N S VE+ED E+ SR     + ++A  D +        P ELMG SP
Sbjct: 1   MGNVNAREEANSNNASAVEDEDAEICSR-----EAMSAASDGN-----HVAPPELMGQSP 60

Query: 61  PRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQGIPTMITWSH 120
           P SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQGIPTMITW H
Sbjct: 61  PHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQGIPTMITWCH 120

Query: 121 GGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDD 180
           GGKE+AVEGSWDNWK++  LQRSGKDFTIMKVL SGVY+YRFI DGQWR+AP+LP A+DD
Sbjct: 121 GGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDD 180

Query: 181 AGNAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLL 240
           AGN +NILDLQDYVPEDI+SIS FEPP SPE+SYS+L LG+ED+SKEPP+ PPHL+ TLL
Sbjct: 181 AGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLL 240

Query: 241 DMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
           ++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTVVLYKSLQR
Sbjct: 241 NLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 2.0e-65
Identity = 140/297 (47.14%), Postives = 188/297 (63.30%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGN NG++++ A  SG    D    S R +  D     P A   +    P ++ M  SPP
Sbjct: 1   MGNANGKDEDAAAGSG--GADVTSSSARSNGGD-----PSARSRHRR--PSSDSMSSSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SP   PSP +F PQVPV PL R +  P ++  W  +  +FD+   EQGIPT+ITW+ GG
Sbjct: 61  GSPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
            +VAVEGSWDNW+S+  LQ+SGKD +I+ VL SG+Y Y+ I DG+ +Y PDLP+  D+ G
Sbjct: 121 NDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           N  NILD+ ++VPE+ ESI  FE PPSP+ SY      +ED++KEP   PP L  TLL  
Sbjct: 181 NVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
                E     ++PQHVVLNH+++++     S+VALG+THRF +KY+TVVLYK L R
Sbjct: 241 ----TEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 86/256 (33.59%), Postives = 121/256 (47.27%), Query Frame = 0


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH+P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 26  GHAPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVSWQQDLEDSVKPTQQARPTVI 85

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 86  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 145

Query: 176 AQDDAGNAYNI---------------LDLQDYVPEDIESISSFEPPPSPESSYSSLQLGS 235
                G   N+               LD  +        +SS  P P  +  Y+     S
Sbjct: 146 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQEMYA---FRS 205

Query: 236 EDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMT 295
           E+  K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  T
Sbjct: 206 EERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSAT 265

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 6.3e-27
Identity = 86/254 (33.86%), Postives = 122/254 (48.03%), Query Frame = 0


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 25  GHGPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVPWQQDLDDSVKPTQQARPTVI 84

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 85  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 144

Query: 176 AQDDAGNAYNIL-----DLQDYVPEDIESISSFE--------PPPSPESSYSSLQLGSED 235
                G   N++     D + +    ++S+ S E         PP P          SE+
Sbjct: 145 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQ-EMYVFRSEE 204

Query: 236 FSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHR 295
             K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  THR
Sbjct: 205 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSTK--DSVMVLSATHR 264

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.1e-26
Identity = 86/254 (33.86%), Postives = 122/254 (48.03%), Query Frame = 0


Query: 56  GHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVS-SEQGIPTMI 115
           GH P +  + +      T    V  LP   +LP   E       L D V  ++Q  PT+I
Sbjct: 25  GHGPGKEHKIMVGS---TDDPSVFSLP-DSKLPGDKEFVPWQQDLDDSVKPAQQARPTVI 84

Query: 116 TWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPW 175
            WS GGKEV + GS++NW +KIPL +S  DF  +  L  G +QY+F  DGQW + P  P 
Sbjct: 85  RWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVDGQWVHDPSEPV 144

Query: 176 AQDDAGNAYNIL-----DLQDYVPEDIESISSFE--------PPPSPESSYSSLQLGSED 235
                G   N++     D + +    ++S+ S E         PP P          SE+
Sbjct: 145 VTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYGQ-EMYVFRSEE 204

Query: 236 FSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHR 295
             K PP+ PPHL   +L+  +  +     +  P HV+LNHLY    +   SV+ L  THR
Sbjct: 205 RFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALSIK--DSVMVLSATHR 264

[Close]

BLAST of Cp4.1LG10g10230 vs. NCBI nr
Match: XP_023543083.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 603 bits (1554), Expect = 1.72e-217
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299
           PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Cp4.1LG10g10230 vs. NCBI nr
Match: XP_022949884.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] >KAG6603833.1 SNF1-related protein kinase regulatory subunit beta-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 600 bits (1546), Expect = 2.85e-216
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299
           PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Cp4.1LG10g10230 vs. NCBI nr
Match: XP_022977712.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima])

HSP 1 Score: 591 bits (1523), Expect = 9.13e-213
Identity = 293/299 (97.99%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYL GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLIGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDE+PNSSESWMNNSSLFDDV+SEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDEVPNSSESWMNNSSLFDDVNSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWA DDAG
Sbjct: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAPDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299
           PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Cp4.1LG10g10230 vs. NCBI nr
Match: XP_004134805.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN49035.1 hypothetical protein Csa_003301 [Cucumis sativus])

HSP 1 Score: 546 bits (1408), Expect = 2.87e-195
Identity = 269/297 (90.57%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297
           P PYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of Cp4.1LG10g10230 vs. NCBI nr
Match: XP_022132781.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Momordica charantia])

HSP 1 Score: 543 bits (1399), Expect = 6.75e-194
Identity = 268/297 (90.24%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG +EEDEEVG R R LPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGADEEDEEVGGRPRGLPDGLAAPPDAHLGYHAGDPPGELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRAIPSPLMFTPQVPVVPLPRPDE+ NSS SWM+NSS FDDV SEQGIPTMITWSHGG
Sbjct: 61  HSPRAIPSPLMFTPQVPVVPLPRPDEVHNSSHSWMHNSSWFDDVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVA+EGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVALEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYS+LQL  ED+SKEPPLAPPHL+TTLL+M
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSNLQLEPEDYSKEPPLAPPHLQTTLLNM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297
           P PYNEILPP+SRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPLSRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL
Match: A0A6J1GE75 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata OX=3662 GN=LOC111453144 PE=3 SV=1)

HSP 1 Score: 600 bits (1546), Expect = 1.38e-216
Identity = 298/299 (99.67%), Postives = 298/299 (99.67%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299
           PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL
Match: A0A6J1IJ92 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111477935 PE=3 SV=1)

HSP 1 Score: 591 bits (1523), Expect = 4.42e-213
Identity = 293/299 (97.99%), Postives = 295/299 (98.66%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYL GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLIGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           RSPRAIPSPLMFTPQVPVVPLPRPDE+PNSSESWMNNSSLFDDV+SEQGIPTMITWSHGG
Sbjct: 61  RSPRAIPSPLMFTPQVPVVPLPRPDEVPNSSESWMNNSSLFDDVNSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWA DDAG
Sbjct: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAPDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299
           PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR
Sbjct: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQRQR 299

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL
Match: A0A0A0KH57 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3 SV=1)

HSP 1 Score: 546 bits (1408), Expect = 1.39e-195
Identity = 269/297 (90.57%), Postives = 280/297 (94.28%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGL+ PPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLSVPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPVVPLPRPDE+ +SS+SWM+NSS FD+V SEQGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVVPLPRPDEVHSSSQSWMHNSSWFDEVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297
           P PYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL
Match: A0A6J1BT93 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Momordica charantia OX=3673 GN=LOC111005556 PE=3 SV=1)

HSP 1 Score: 543 bits (1399), Expect = 3.27e-194
Identity = 268/297 (90.24%), Postives = 277/297 (93.27%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG +EEDEEVG R R LPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGADEEDEEVGGRPRGLPDGLAAPPDAHLGYHAGDPPGELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SPRAIPSPLMFTPQVPVVPLPRPDE+ NSS SWM+NSS FDDV SEQGIPTMITWSHGG
Sbjct: 61  HSPRAIPSPLMFTPQVPVVPLPRPDEVHNSSHSWMHNSSWFDDVGSEQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVA+EGSWDNWK KIPLQRSGKDFTIMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVALEGSWDNWKMKIPLQRSGKDFTIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSYS+LQL  ED+SKEPPLAPPHL+TTLL+M
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYSNLQLEPEDYSKEPPLAPPHLQTTLLNM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297
           P PYNEILPP+SRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPLSRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297

[Close]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL
Match: A0A5D3CKN6 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00280 PE=3 SV=1)

HSP 1 Score: 541 bits (1395), Expect = 1.33e-193
Identity = 265/297 (89.23%), Postives = 279/297 (93.94%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGNVNGREDED NPSG EEEDEEVG RR SLPDGLAAPPDAHL Y  GDPP ELMGHSPP
Sbjct: 1   MGNVNGREDEDGNPSGAEEEDEEVGGRRSSLPDGLAAPPDAHLGYHAGDPPAELMGHSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
           +SPRAIPSPLMFTPQVPV+PLPRPDE+ +SS+SWM+NSS FD+V S+QGIPTMITWSHGG
Sbjct: 61  QSPRAIPSPLMFTPQVPVIPLPRPDEVHSSSQSWMHNSSWFDEVGSDQGIPTMITWSHGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
           KEVAVEGSWDNWK KIPLQRSGKDF IMKVL SGVYQYRFIADGQWRYAPDLPWAQDDAG
Sbjct: 121 KEVAVEGSWDNWKMKIPLQRSGKDFAIMKVLPSGVYQYRFIADGQWRYAPDLPWAQDDAG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           NAYNILDLQDYVPEDIESISSFEPP SPESSY+SLQL ++D+SKEPPLAPPHLKTTLLDM
Sbjct: 181 NAYNILDLQDYVPEDIESISSFEPPQSPESSYNSLQLVADDYSKEPPLAPPHLKTTLLDM 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 297
           P PYNEILPP+SRPQHVVLNHLYMQKERGGPSVVALGM+HRFL KYVTVVLYKSLQR
Sbjct: 241 PCPYNEILPPLSRPQHVVLNHLYMQKERGGPSVVALGMSHRFLRKYVTVVLYKSLQR 297

[Close]

BLAST of Cp4.1LG10g10230 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105
Identity = 183/248 (73.79%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 51  PTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQG 110
           P ELMG SPP SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQG
Sbjct: 12  PPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQG 71

Query: 111 IPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYA 170
           IPTMITW HGGKE+AVEGSWDNWK++  LQRSGKDFTIMKVL SGVY+YRFI DGQWR+A
Sbjct: 72  IPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHA 131

Query: 171 PDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLA 230
           P+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPP SPE+SYS+L LG+ED+SKEPP+ 
Sbjct: 132 PELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVV 191

Query: 231 PPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTV 290
           PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTV
Sbjct: 192 PPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 251

Query: 291 VLYKSLQR 298
           VLYKSLQR
Sbjct: 252 VLYKSLQR 259

[Close]

BLAST of Cp4.1LG10g10230 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105
Identity = 183/248 (73.79%), Postives = 213/248 (85.89%), Query Frame = 0


Query: 51  PTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQG 110
           P ELMG SPP SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQG
Sbjct: 14  PPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQG 73

Query: 111 IPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYA 170
           IPTMITW HGGKE+AVEGSWDNWK++  LQRSGKDFTIMKVL SGVY+YRFI DGQWR+A
Sbjct: 74  IPTMITWCHGGKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHA 133

Query: 171 PDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLA 230
           P+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPP SPE+SYS+L LG+ED+SKEPP+ 
Sbjct: 134 PELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVV 193

Query: 231 PPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTV 290
           PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTV
Sbjct: 194 PPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 253

Query: 291 VLYKSLQR 298
           VLYKSLQR
Sbjct: 254 VLYKSLQR 261

[Close]

BLAST of Cp4.1LG10g10230 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 375.2 bits (962), Expect = 5.0e-104
Identity = 183/248 (73.79%), Postives = 212/248 (85.48%), Query Frame = 0


Query: 51  PTELMGHSPPRSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNN-SSLFDDVSSEQG 110
           P ELMG SPP SPRA  SPLMF PQVPV+PL RPDE+   + SWM + SSL+++ S+EQG
Sbjct: 12  PPELMGQSPPHSPRATQSPLMFAPQVPVLPLQRPDEIHIPNPSWMQSPSSLYEEASNEQG 71

Query: 111 IPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYA 170
           IPTMITW HGGKE+AVEGSWDNWK+   LQRSGKDFTIMKVL SGVY+YRFI DGQWR+A
Sbjct: 72  IPTMITWCHGGKEIAVEGSWDNWKTS-RLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHA 131

Query: 171 PDLPWAQDDAGNAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLA 230
           P+LP A+DDAGN +NILDLQDYVPEDI+SIS FEPP SPE+SYS+L LG+ED+SKEPP+ 
Sbjct: 132 PELPLARDDAGNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVV 191

Query: 231 PPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTV 290
           PPHL+ TLL++P+   +I  P+ RPQHV+LNHLYMQK + GPSVVALG THRFLAKYVTV
Sbjct: 192 PPHLQMTLLNLPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTV 251

Query: 291 VLYKSLQR 298
           VLYKSLQR
Sbjct: 252 VLYKSLQR 258

[Close]

BLAST of Cp4.1LG10g10230 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-66
Identity = 140/297 (47.14%), Postives = 188/297 (63.30%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGN NG++++ A  SG    D    S R +  D     P A   +    P ++ M  SPP
Sbjct: 1   MGNANGKDEDAAAGSG--GADVTSSSARSNGGD-----PSARSRHRR--PSSDSMSSSPP 60

Query: 61  RSPRAIPSPLMFTPQVPVVPLPRPDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGG 120
            SP   PSP +F PQVPV PL R +  P ++  W  +  +FD+   EQGIPT+ITW+ GG
Sbjct: 61  GSPARSPSPFLFAPQVPVAPLQRANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGG 120

Query: 121 KEVAVEGSWDNWKSKIPLQRSGKDFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAG 180
            +VAVEGSWDNW+S+  LQ+SGKD +I+ VL SG+Y Y+ I DG+ +Y PDLP+  D+ G
Sbjct: 121 NDVAVEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVG 180

Query: 181 NAYNILDLQDYVPEDIESISSFEPPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDM 240
           N  NILD+ ++VPE+ ESI  FE PPSP+ SY      +ED++KEP   PP L  TLL  
Sbjct: 181 NVCNILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT 240

Query: 241 PSPYNEILPPISRPQHVVLNHLYMQKERGGPSVVALGMTHRFLAKYVTVVLYKSLQR 298
                E     ++PQHVVLNH+++++     S+VALG+THRF +KY+TVVLYK L R
Sbjct: 241 ----TEETAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283

[Close]

BLAST of Cp4.1LG10g10230 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein )

HSP 1 Score: 232.3 bits (591), Expect = 5.2e-61
Identity = 140/334 (41.92%), Postives = 188/334 (56.29%), Query Frame = 0


Query: 1   MGNVNGREDEDANPSGVEEEDEEVGSRRRSLPDGLAAPPDAHLDYLTGDPPTELMGHSPP 60
           MGN NG++++ A  SG    D    S R +  D     P A   +    P ++ M  SPP
Sbjct: 1   MGNANGKDEDAAAGSG--GADVTSSSARSNGGD-----PSARSRHRR--PSSDSMSSSPP 60

Query: 61  RSPRAIPSPLMFTPQ-------------------------------------VPVVPLPR 120
            SP   PSP +F PQ                                     VPV PL R
Sbjct: 61  GSPARSPSPFLFAPQPTLLFHVTSYNICSPMRHLFHCLGLTCVPNGCISCRMVPVAPLQR 120

Query: 121 PDELPNSSESWMNNSSLFDDVSSEQGIPTMITWSHGGKEVAVEGSWDNWKSKIPLQRSGK 180
            +  P ++  W  +  +FD+   EQGIPT+ITW+ GG +VAVEGSWDNW+S+  LQ+SGK
Sbjct: 121 ANAPPPNNIQWNQSQRVFDN-PPEQGIPTIITWNQGGNDVAVEGSWDNWRSRKKLQKSGK 180

Query: 181 DFTIMKVLSSGVYQYRFIADGQWRYAPDLPWAQDDAGNAYNILDLQDYVPEDIESISSFE 240
           D +I+ VL SG+Y Y+ I DG+ +Y PDLP+  D+ GN  NILD+ ++VPE+ ESI  FE
Sbjct: 181 DHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCNILDVHNFVPENPESIVEFE 240

Query: 241 PPPSPESSYSSLQLGSEDFSKEPPLAPPHLKTTLLDMPSPYNEILPPISRPQHVVLNHLY 298
            PPSP+ SY      +ED++KEP   PP L  TLL       E     ++PQHVVLNH++
Sbjct: 241 APPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT----TEETAIATKPQHVVLNHVF 300

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g10230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY5	4.3e-108	67.22	SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX...	[more]
Q84VQ1	2.0e-65	47.14	SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX...	[more]
O43741	3.7e-27	33.59	5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2...	[more]
Q9QZH4	6.3e-27	33.86	5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=...	[more]
Q6PAM0	1.1e-26	33.86	5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab...	[more]

BLAST of Cp4.1LG10g10230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023543083.1	1.72e-217	100.00	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita pepo subsp...	[more]
XP_022949884.1	2.85e-216	99.67	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita moschata] ...	[more]
XP_022977712.1	9.13e-213	97.99	SNF1-related protein kinase regulatory subunit beta-2-like [Cucurbita maxima]	[more]
XP_004134805.1	2.87e-195	90.57	SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN4903...	[more]
XP_022132781.1	6.75e-194	90.24	SNF1-related protein kinase regulatory subunit beta-2-like [Momordica charantia]	[more]

BLAST of Cp4.1LG10g10230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GE75	1.38e-216	99.67	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita moschata...	[more]
A0A6J1IJ92	4.42e-213	97.99	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima O...	[more]
A0A0A0KH57	1.39e-195	90.57	AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511020 PE=3...	[more]
A0A6J1BT93	3.27e-194	90.24	SNF1-related protein kinase regulatory subunit beta-2-like OS=Momordica charanti...	[more]
A0A5D3CKN6	1.33e-193	89.23	SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. ...	[more]

BLAST of Cp4.1LG10g10230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16360.1	2.0e-105	73.79	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.3	2.0e-105	73.79	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT4G16360.2	5.0e-104	73.79	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.1	1.4e-66	47.14	5'-AMP-activated protein kinase beta-2 subunit protein	[more]
AT5G21170.2	5.2e-61	41.92	5'-AMP-activated protein kinase beta-2 subunit protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006828	Association with the SNF1 complex (ASC) domain	SMART	SM01010	AMPKBI_2	coord: 205..295 e-value: 3.9E-19 score: 79.6
IPR006828	Association with the SNF1 complex (ASC) domain	PFAM	PF04739	AMPKBI	coord: 223..293 e-value: 2.9E-18 score: 65.9
IPR032640	AMP-activated protein kinase, glycogen-binding domain	PFAM	PF16561	AMPK1_CBM	coord: 110..189 e-value: 1.3E-31 score: 108.6
IPR013783	Immunoglobulin-like fold	GENE3D	2.60.40.10	Immunoglobulins	coord: 103..192 e-value: 8.8E-25 score: 88.4
None	No IPR available	GENE3D	6.20.250.60		coord: 197..295 e-value: 2.0E-22 score: 81.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..71
None	No IPR available	PANTHER	PTHR46316:SF2	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2	coord: 1..297
None	No IPR available	CDD	cd02859	E_set_AMPKbeta_like_N	coord: 111..187 e-value: 2.74093E-27 score: 99.5956
IPR043554	SNF1-related protein kinase regulatory subunit beta	PANTHER	PTHR46316	SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1	coord: 1..297
IPR014756	Immunoglobulin E-set	SUPERFAMILY	81296	E set domains	coord: 109..195
IPR037256	ASC domain superfamily	SUPERFAMILY	160219	AMPKBI-like	coord: 192..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g10230.1	Cp4.1LG10g10230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0005515	protein binding