Cp4.1LG10g10200 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview
NameCp4.1LG10g10200
Typegene
OrganismCucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
DescriptionDYW_deaminase domain-containing protein
LocationCp4.1LG10: 4165176 .. 4165646 (+)
RNA-Seq ExpressionCp4.1LG10g10200
SyntenyCp4.1LG10g10200
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGCCGAACAATCTCCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGAAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTCCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCCTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGGGATGGATTGTATCTGGAAGTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG

mRNA sequence

ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGCCGAACAATCTCCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGAAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTCCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCCTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGGGATGGATTGTATCTGGAAGTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG

Coding sequence (CDS)

ATGGACCGCCAAAGCACCAAGCGACCAAGAGAATCATCAGCCGAACAATCTCCGCTGCCGGAGATCGGTAATGGAAAGAAGCAGCGCCTCCACGGCGGAAGTGACGACGCCAAGGAACCTCTTCCTAGAACATTCTTTGATTTCGATCTGTCGTTCGGCGTCTTCGATTTCCCCTGGTTGAAGGAGAGCCTGATTTATTCCGAATCCGAGGACTGGAAATTGGACGATGTTTTCTTCACCTCCTTTTACAATGGACTATCCACCGCCGATGCTACTACGATTGGGACGGAGTTGTCCTCGGGGCAATTGGTTTGGAGTAATCTGCCGGATCCTTGGGAGGCGGAATACGAGGCACAAGTGCCGCCGACGACGCTGGACGACGGCGGAGGAGGACAGGCAGGGGAGGGGATGGATTGTATCTGGAAGTCTCTGCTAAATCAACCGCTTCAACAAGGGAGTAGAGCGTTGTAG

Protein sequence

MDRQSTKRPRESSAEQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQVPPTTLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL
Homology
BLAST of Cp4.1LG10g10200 vs. NCBI nr
Match: KAG6603846.1 (hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 318 bits (814), Expect = 1.96e-109
Identity = 153/156 (98.08%), Postives = 154/156 (98.72%), Query Frame = 0

Query: 1   MDRQSTKRPRESSAEQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
           MDRQSTKRPRESSAEQS LPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL
Sbjct: 1   MDRQSTKRPRESSAEQSSLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60

Query: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
           KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120

Query: 121 PPTTLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           PPTTLDDGGGGQAGEG+DCIW SLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGIDCIWSSLLNQPLQQGSRAL 156

BLAST of Cp4.1LG10g10200 vs. NCBI nr
Match: XP_022977867.1 (uncharacterized protein LOC111478029 [Cucurbita maxima])

HSP 1 Score: 311 bits (797), Expect = 7.67e-107
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0

Query: 1   MDRQSTKRPRESSAEQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
           M+RQSTKRPRESSAEQS L EIGNGKKQRLHGGSDDAKEPLPRTF+DFDLSFGVFDFPWL
Sbjct: 1   MERQSTKRPRESSAEQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDLSFGVFDFPWL 60

Query: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
           KESLIYSESEDWKLDDVFFTSFYNGLSTADAT+IGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPDPWEAEYEAQV 120

Query: 121 PPTTLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           PPTTLDDGGGGQAGEGMDCIW SLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156

BLAST of Cp4.1LG10g10200 vs. NCBI nr
Match: KGN49015.1 (hypothetical protein Csa_004415 [Cucumis sativus])

HSP 1 Score: 181 bits (460), Expect = 1.97e-55
Identity = 102/169 (60.36%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 1   MDRQSTKRPRESSA---------EQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL- 60
           M+R +TKRPRESS+         +QS LPEI N K+Q  H   D+A+E  P T FDFDL 
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60

Query: 61  SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120
           SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD   I T L+ G      LPD
Sbjct: 61  SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120

Query: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           PWE +YEAQ PP    +LD  GG Q GE MDCIW+S+LNQPLQQGS AL
Sbjct: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

BLAST of Cp4.1LG10g10200 vs. NCBI nr
Match: KAG6594718.1 (hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 167 bits (423), Expect = 9.34e-50
Identity = 97/172 (56.40%), Postives = 110/172 (63.95%), Query Frame = 0

Query: 1   MDRQSTKRPRESSA---------------EQSPLPEIGNGKKQRLHGGSDDAKEPLPRTF 60
           MDR++ KRPRESS+               EQS  PEIGNG+K++   G            
Sbjct: 1   MDRRNAKRPRESSSSSSSSSSSSSAGVRNEQSSQPEIGNGEKRQHVEGFG--------RL 60

Query: 61  FDFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVW 120
           FD DLSFGVFDFPWLK+SLIYS+ EDWK++DVFFTSF    +TAD     TE S  QLVW
Sbjct: 61  FDLDLSFGVFDFPWLKDSLIYSKYEDWKVEDVFFTSFDGVSTTADIAL--TEWSE-QLVW 120

Query: 121 SNLPDPWEAEYEAQVPPTTLD----DGGGGQAGEGMDCIWKSLLNQPLQQGS 153
            NLPDPWE EYEA V P T      + G G AGEGMDC+W SLLNQPLQQGS
Sbjct: 121 CNLPDPWEEEYEAHVAPATATATAVEDGEGPAGEGMDCVWNSLLNQPLQQGS 161

BLAST of Cp4.1LG10g10200 vs. NCBI nr
Match: KAA0025593.1 (hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK12468.1 hypothetical protein E5676_scaffold255G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 157 bits (398), Expect = 2.94e-46
Identity = 87/147 (59.18%), Postives = 102/147 (69.39%), Query Frame = 0

Query: 15  EQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL-SFGVFDFPWLKESLIYSESEDWK 74
           +QS  PEI N K+Q  H    D +   P T FDFDL SFGVFDFPWLK+ LIYS+S+DWK
Sbjct: 3   DQSSPPEIANVKRQHSHDA--DQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 62

Query: 75  LDDVFFTSFYNGLSTADATTIGTELSSGQLVWSN-LPDPWEAEYEAQV---PPTTLDDGG 134
            +DVFFTS YNG S+     I T L+ G   ++  LPDPWE +YEAQ    PP +LD  G
Sbjct: 63  FEDVFFTSVYNGASST--FDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLD--G 122

Query: 135 GGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           G Q GEGMDCIW+S+LNQPLQQGS AL
Sbjct: 123 GEQGGEGMDCIWRSVLNQPLQQGSSAL 143

BLAST of Cp4.1LG10g10200 vs. ExPASy TrEMBL
Match: A0A6J1IJM6 (uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029 PE=4 SV=1)

HSP 1 Score: 311 bits (797), Expect = 3.71e-107
Identity = 150/156 (96.15%), Postives = 153/156 (98.08%), Query Frame = 0

Query: 1   MDRQSTKRPRESSAEQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDLSFGVFDFPWL 60
           M+RQSTKRPRESSAEQS L EIGNGKKQRLHGGSDDAKEPLPRTF+DFDLSFGVFDFPWL
Sbjct: 1   MERQSTKRPRESSAEQSSLLEIGNGKKQRLHGGSDDAKEPLPRTFYDFDLSFGVFDFPWL 60

Query: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPDPWEAEYEAQV 120
           KESLIYSESEDWKLDDVFFTSFYNGLSTADAT+IGTELSSGQLVWSNLPDPWEAEYEAQV
Sbjct: 61  KESLIYSESEDWKLDDVFFTSFYNGLSTADATSIGTELSSGQLVWSNLPDPWEAEYEAQV 120

Query: 121 PPTTLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           PPTTLDDGGGGQAGEGMDCIW SLLNQPLQQGSRAL
Sbjct: 121 PPTTLDDGGGGQAGEGMDCIWSSLLNQPLQQGSRAL 156

BLAST of Cp4.1LG10g10200 vs. ExPASy TrEMBL
Match: A0A0A0KH39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1)

HSP 1 Score: 181 bits (460), Expect = 9.53e-56
Identity = 102/169 (60.36%), Postives = 118/169 (69.82%), Query Frame = 0

Query: 1   MDRQSTKRPRESSA---------EQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL- 60
           M+R +TKRPRESS+         +QS LPEI N K+Q  H   D+A+E  P T FDFDL 
Sbjct: 1   MERHNTKRPRESSSLSSPPDGIYDQSSLPEIANVKRQHSH---DNAQESSPGTSFDFDLL 60

Query: 61  SFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTADATTIGTELSSGQLVWSNLPD 120
           SFGVFDFPWLK+ LIYS+S+DWK +DVFFTS YNG STAD   I T L+ G      LPD
Sbjct: 61  SFGVFDFPWLKDGLIYSKSDDWKFEDVFFTSVYNGASTAD---IATPLTIGTAFTEFLPD 120

Query: 121 PWEAEYEAQVPPT---TLDDGGGGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           PWE +YEAQ PP    +LD  GG Q GE MDCIW+S+LNQPLQQGS AL
Sbjct: 121 PWEKDYEAQAPPPPPPSLD--GGEQGGEAMDCIWRSVLNQPLQQGSSAL 161

BLAST of Cp4.1LG10g10200 vs. ExPASy TrEMBL
Match: A0A5A7SLQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00440 PE=4 SV=1)

HSP 1 Score: 157 bits (398), Expect = 1.42e-46
Identity = 87/147 (59.18%), Postives = 102/147 (69.39%), Query Frame = 0

Query: 15  EQSPLPEIGNGKKQRLHGGSDDAKEPLPRTFFDFDL-SFGVFDFPWLKESLIYSESEDWK 74
           +QS  PEI N K+Q  H    D +   P T FDFDL SFGVFDFPWLK+ LIYS+S+DWK
Sbjct: 3   DQSSPPEIANVKRQHSHDA--DQEYSSPGTSFDFDLLSFGVFDFPWLKDGLIYSKSDDWK 62

Query: 75  LDDVFFTSFYNGLSTADATTIGTELSSGQLVWSN-LPDPWEAEYEAQV---PPTTLDDGG 134
            +DVFFTS YNG S+     I T L+ G   ++  LPDPWE +YEAQ    PP +LD  G
Sbjct: 63  FEDVFFTSVYNGASST--FDIATPLTIGTKAFTEFLPDPWEKDYEAQALPQPPPSLD--G 122

Query: 135 GGQAGEGMDCIWKSLLNQPLQQGSRAL 156
           G Q GEGMDCIW+S+LNQPLQQGS AL
Sbjct: 123 GEQGGEGMDCIWRSVLNQPLQQGSSAL 143

BLAST of Cp4.1LG10g10200 vs. ExPASy TrEMBL
Match: A0A6J1BUL5 (uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005508 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.46e-20
Identity = 69/136 (50.74%), Postives = 78/136 (57.35%), Query Frame = 0

Query: 1   MDRQSTKRPRESSAEQ--------------SPLPEIGNGKKQRLHGGSDDAKEPLPRTFF 60
           MDR +TKR RES +                S  PEIGN KKQ   GG          T  
Sbjct: 1   MDRHNTKRARESLSASAASSDDAVSYERSYSSPPEIGNVKKQHTDGGGGQGA-----TGR 60

Query: 61  DFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSF-YNGLSTADAT-TIGTELS--SGQ 115
             DL   VFDFPWLK+SLI S+SEDWK +DVFFTS   NG STAD T TIGT  +  SGQ
Sbjct: 61  SSDLD--VFDFPWLKDSLI-SKSEDWKFEDVFFTSLDSNGASTADDTLTIGTAFTELSGQ 120

BLAST of Cp4.1LG10g10200 vs. ExPASy TrEMBL
Match: A0A7N2LSF2 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 5.01e-15
Identity = 50/130 (38.46%), Postives = 67/130 (51.54%), Query Frame = 0

Query: 30  LHGGSDDAKEPLPRTFFDFDLSFGVFDFPWLKESLIYSESEDWKLDDVFFTSFYNGLSTA 89
           L+  +DD             L  GVFDFPWLK+ +I S+SEDWKL+D F +S Y+  ST 
Sbjct: 38  LNDVNDDKDSEKTSCDSSLALDEGVFDFPWLKDGMI-SKSEDWKLEDTFSSSLYDTSSTN 97

Query: 90  DATTIGTELSSGQLVWS-------NLPDPWEAEYEAQVPPTTLDDGGGGQAGEGMDCIWK 149
           +A     E  +GQ +         N PD  E +++  +     DDG G        CIW 
Sbjct: 98  EAGI--DEFPAGQCLCQTPEPALLNKPDDHEEKFDDNLRRPQEDDGLG--------CIWT 156

Query: 150 SLLNQPLQQG 152
           SLL++PLQQG
Sbjct: 158 SLLSEPLQQG 156

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6603846.11.96e-10998.08hypothetical protein SDJN03_04455, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022977867.17.67e-10796.15uncharacterized protein LOC111478029 [Cucurbita maxima][more]
KGN49015.11.97e-5560.36hypothetical protein Csa_004415 [Cucumis sativus][more]
KAG6594718.19.34e-5056.40hypothetical protein SDJN03_11271, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0025593.12.94e-4659.18hypothetical protein E6C27_scaffold253G00830 [Cucumis melo var. makuwa] >TYK1246... [more]
Match NameE-valueIdentityDescription
A0A6J1IJM63.71e-10796.15uncharacterized protein LOC111478029 OS=Cucurbita maxima OX=3661 GN=LOC111478029... [more]
A0A0A0KH399.53e-5660.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G510330 PE=4 SV=1[more]
A0A5A7SLQ61.42e-4659.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6J1BUL51.46e-2050.74uncharacterized protein LOC111005508 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A7N2LSF25.01e-1538.46Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG10g10200.1Cp4.1LG10g10200.1mRNA