Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: five_prime_UTRexonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCTAAACCCTTAAAGCTTGTTCCAACAATGGCTTCCTTACAATCTTCATTTCTCCTCCCTTCCTCCTCTTGTTCTTCAAGAAGAACAATTGCCCCAGCTGCCATTCACGACCCCAAGCTTCCCAATCTCCGTATCTCAGTTCCCACGCTCCCAAACACTTCCACTCCCTCCCTTAACGTCATTGAACAACTTTGTTTAAACCAACCCATTAATGTCCAATCCCCCTTCACATCACACCTTCACCACATCTTAGACGCCGTAGCAGACAGGGTAGAGATGCACAACGATCTCCACCTACAGCGAGACAATTGGAATTCCCTTCTCCTCAATTCCATCAACATGATCACTCTCACCGCCTCCGCTATGGCCGCCGCCGCGCCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGACTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTGTGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAGTGCAGCTAGATTGTTCAAGCAGCTCCAATCCCAAATCGAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTATTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGGCATGCTTGAAAAATTCCCCAAAACGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTTACGAATCCAAGACAGAGAACGAAAACGCCCAATTTGATGGAAACCAACGACAAGATTCCAATGGATGGAGCGATGAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTCATAAAGACAAAAGACGCTCAAGACTACGCCAGACTTGGGAATTTAGTATTGAAGGTTCATAAGAGTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGCTCTGCTTTTGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCTGCCGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAGCGTGGCGGGGTTGTTGTGGCTGATGGAAGAATCCGTTAGAGGGACGCTGGAGGAGACAGATTGGGAGAAGAGGGAAAACGGGGAAGTGTTTGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTAGCTCAGCTCAGACAATTGGCTTCCAAATCCACCGCCGCTAGAACAGAAGGGATTTGCGTGGATGAATTCGCCAGCAAGCTCTTTTGATTTTTTTTTTTCTTTTTTTTTTTTTTTTTAATTTTATTATTATTATTCTACAATTTCTGATCGGTTGATTCCTTGAGATGGGAAACGTACGTATTGTTCATCCGAGCATGTAAAATAAATAAATAAATAATATATATATTGATATTCCGAATTTAACCTTTGGATTAAAATCACACTAATTGATGAGTTTTACTTTTAAAGAGATATATTGAATCTCTCATTTAAAATATTTCCATATATACTTCTTTTTTACAGATTTGAATCTTTCATTTAACATATTTCTATATATACTTTTAAATAATAATAATCTCTTAAACTTTACTTTTGTCTGATAAATTATTATTATTCTATATGACAATTTTTCAAATAAAAATTATATTCGACAAAAAGTTGAAATGTTTAGATTGTAAATTCATTAAACAAAAAAATTGAAAAGTCTGAAGCTATTAAATACTTTGTAAAGTTTAAAAATTTTAAACCATTGTAGCTAAATAAAACTAATATACTAAAATAGATAATTATGATATATTTATTATGAATTTAATATTTAATTAAATCTTACTTAAAATTTCCAATTATAATTAAATACTATATCTGTAGAAAAGTACAAGCTTTTATTTGAATTTAGTGTTAAAAGAAAAAAAAAACACAAAGGTAGTTCTTGTACAATGTCATCATGTATTATTACTAAAAAAAAATAAAAAGAATGACAAGAACAGCTAAATAATTCTAGACTAAACGGCACCATTATAAAAATAAGAAATCTAACTCTAAAAAATAGGATATCCACTTAAACAAACAGACTCTTCGTTCTTTCTCGTCTTCAATGTCATTACCAACAATGACAGTAGTGAATGAGATCCAAACGACAACAACCATAGCAGTTTCATCGACTTTAAAAGTTAAAATTGATACAATTTCATAAATTTATCGATAAACATATATTTTTTTTGCAAAACCAAATAAATAAATAAATTAGTCAAATTCACATGTTTGACTAATTATTTTCGGTTCCCCAATCTAATTTTAGTCGCTCAATATAAATAAAGGATGAAAAATGGAAATAAGAAAGTTGGATGTAGAAGAAAGAGATTATTAATGTCACTTGAGTGATGTAATTGACAATGGGTAAAATATTATGGAGTGGGTCGAATTATTTGACCACAATTAAATTAGAAAACCTATAACATTTAGACGAATTAAAGTATATGTTATTTATTATTTATTTATAGTAATAATAATAATAATTAATAATATATATATAAAAAAACCACGACACGATAGCTTAAAAAAACCGAAAAACCAACAATTTTATACGTCCTGAATGTTTGCATGGACTGATTAAAACAATAGACTTAATTGTCAATTCAAAGGCAGACAACAAATCAACAGTCAAACTTACTGCTTGCTTGCGTATAACCTCATACGCCGTCGTTTTGCTCGGGGACCAAGTCCAACGATGACTTGTCTCTTAATTTAGTTTTCGTTCTTTCCTTATTTTTCTAGTTTTTTTTCTTTTCTTTTCTTTTCAATATTTATGTTTTTTTTTTATATTTTAATATATTGGCAGAAAGTACCAAACAAACAAATTAATAGATGAAGTAATGTTTATACAACCGATTTTTTTTTAAAAAATAAAAGTAAAAAATTAATTATGAAAAGAAATATTAGTTTTTGTATATATTAAAAAAAATATTATCCAAGTGAATCAACACAGACTCTAAATTTGTCATATCATAAAGGAAAATAAAATAAAATAAAAAAATAGAATCCATTTATTCTTAAAATTTTGGAGATTATAGCAATTAAAATCTATATTAATTATATCCATTTAACCCCATAATTGAATCAATTTACATCATTCATTCAAATTTCGTTTTAAATTCTTTTATATATTTGTATAAACTTTTTAAAAATTACAATTATTAACGTAAATTAGAGAAAATATATGAGAATCCATAATTTGATCATTTTTCTTGCTACTTTCCTGAGATTTTTAGATATAATTAGCTACAAATAAATAAAAAAAAAAATAATCACCCACGAATTTATTGTAAAAGTTAATTATTAAAAATGATAATAGATTAAAAAGAAAAATTGAAAAAAAGATAATTATTAAAGAAGAAATGAAGCGTCAAATATAGAAGGACGTAGGATGATAGGGCATGGTTGTTTTGGGAGACCTAATCCAAGCGAGAAGAGAATGTAATATTTTAGAACAAATCGTAATTTTAAACACAAAAAAATGGGGGGAACGAGTCAGGAAGCACGAGTCAGGTAGGTAGCCGAGTCAATTCAGCCTGCTAGTCAAAATTTCTTGCTATCTGACCCTTCAATTCATTTCCCCTATAAAACCCCCAGCCACCATTAGCTACCCTCCCACCTCAATTCCATACAAAACCTTCTCAAACAAGCCCCCATTTGATACAAGCTCCAAACTTGTTCCAACAATGGCTTCCTTACAAGCTTCTTTTCTCCTCCCATCTTCAAGAAAAACAATTACCCAAGCTTCCATTCACGTCCCAAAGCTTCCCAATCTCCGTATCTCTGTTCCCAGACTCCCCAAAACCTCCACTGCCTCCCTCAAACTCATTGAAGAGCTTTGTTTAAACCAACCCCTTAATATCATTCCTCCTACCCAATCCCCCCTCACATCGCACCTCCACGCCATCTTGGACATCGTAGCCGACCGGGTAGAGATGCACAACAATATCTGCCAACAGCGAGACAACTGGAATTCCCTTTTCCTCAATTCCATCAACATGATCACTCTCGCTGCCTCTGTTATGGCCGCCACCGCACCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGGCTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTATGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCAGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCCAAAAAGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTGACGAATCTAAGACACAGAACGAAAACGCCCATTTTGATGGAAACCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAAGCCGAAATGAGAGAAGTTGTTGAAGTCATGAAGACAAAAGACGCTAAAGACTACGTCAGACTTGGGAATTTAGTATTGAAGGTTAATAAAACTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGTTCTGCTTTCGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCGGCCGCCGTGAATGCGTTAGAACACGGTGGGCAAATTGGGATGGTGTTTGAGATGTACAGAAACTCGGCGGGGTTCTTCGGGGTAATGGAGGAATCCATTAGAGGGACGCTTGAGGAGACAGATTGGGAGAAGAGGGAAAATGGGCAAGTGTTCGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTGCCAAATCTGCTGCGGCTAGACAAGAAGGGATTTCCATAGATGAATTCGCCAGCAAACTGTTC
mRNA sequence
TTCTAAACCCTTAAAGCTTGTTCCAACAATGGCTTCCTTACAATCTTCATTTCTCCTCCCTTCCTCCTCTTGTTCTTCAAGAAGAACAATTGCCCCAGCTGCCATTCACGACCCCAAGCTTCCCAATCTCCGTATCTCAGTTCCCACGCTCCCAAACACTTCCACTCCCTCCCTTAACGTCATTGAACAACTTTGTTTAAACCAACCCATTAATGTCCAATCCCCCTTCACATCACACCTTCACCACATCTTAGACGCCGTAGCAGACAGGGTAGAGATGCACAACGATCTCCACCTACAGCGAGACAATTGGAATTCCCTTCTCCTCAATTCCATCAACATGATCACTCTCACCGCCTCCGCTATGGCCGCCGCCGCGCCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGACTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTGTGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAGTGCAGCTAGATTGTTCAAGCAGCTCCAATCCCAAATCGAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTATTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGGCATGCTTGAAAAATTCCCCAAAACGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTTACGAATCCAAGACAGAGAACGAAAACGCCCAATTTGATGGAAACCAACGACAAGATTCCAATGGATGGAGCGATGAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTCATAAAGACAAAAGACGCTCAAGACTACGCCAGACTTGGGAATTTAGTATTGAAGGTTCATAAGAGTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGCTCTGCTTTTGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCTGCCGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAGCGTGGCGGGGTTGTTGTGGCTGATGGAAGAATCCGTTAGAGGGACGCTGGAGGAGACAGATTGGGAGAAGAGGGAAAACGGGGAAGTGTTTGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTAGCTCAGCTCAGACAATTGGCTTCCAAATCCACCGCCGCTAGAACAGAAGGGATTTGCCTTCCCAATCTCCGTATCTCTGTTCCCAGACTCCCCAAAACCTCCACTGCCTCCCTCAAACTCATTGAAGAGCTTTGTTTAAACCAACCCCTTAATATCATTCCTCCTACCCAATCCCCCCTCACATCGCACCTCCACGCCATCTTGGACATCGTAGCCGACCGGGTAGAGATGCACAACAATATCTGCCAACAGCGAGACAACTGGAATTCCCTTTTCCTCAATTCCATCAACATGATCACTCTCGCTGCCTCTGTTATGGCCGCCACCGCACCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGGCTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTATGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCAGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCCAAAAAGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTGACGAATCTAAGACACAGAACGAAAACGCCCATTTTGATGGAAACCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAAGCCGAAATGAGAGAAGTTGTTGAAGTCATGAAGACAAAAGACGCTAAAGACTACGTCAGACTTGGGAATTTAGTATTGAAGGTTAATAAAACTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGTTCTGCTTTCGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCGGCCGCCGTGAATGCGTTAGAACACGGTGGGCAAATTGGGATGGTGTTTGAGATGTACAGAAACTCGGCGGGGTTCTTCGGGGTAATGGAGGAATCCATTAGAGGGACGCTTGAGGAGACAGATTGGGAGAAGAGGGAAAATGGGCAAGTGTTCGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTGCCAAATCTGCTGCGGCTAGACAAGAAGGGATTTCCATAGATGAATTCGCCAGCAAACTGTTC
Coding sequence (CDS)
ATGGCTTCCTTACAATCTTCATTTCTCCTCCCTTCCTCCTCTTGTTCTTCAAGAAGAACAATTGCCCCAGCTGCCATTCACGACCCCAAGCTTCCCAATCTCCGTATCTCAGTTCCCACGCTCCCAAACACTTCCACTCCCTCCCTTAACGTCATTGAACAACTTTGTTTAAACCAACCCATTAATGTCCAATCCCCCTTCACATCACACCTTCACCACATCTTAGACGCCGTAGCAGACAGGGTAGAGATGCACAACGATCTCCACCTACAGCGAGACAATTGGAATTCCCTTCTCCTCAATTCCATCAACATGATCACTCTCACCGCCTCCGCTATGGCCGCCGCCGCGCCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGACTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTGTGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAGTGCAGCTAGATTGTTCAAGCAGCTCCAATCCCAAATCGAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTATTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGGCATGCTTGAAAAATTCCCCAAAACGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTTACGAATCCAAGACAGAGAACGAAAACGCCCAATTTGATGGAAACCAACGACAAGATTCCAATGGATGGAGCGATGAACTTGAGGCGGAAATGAGAGAGGTTGTTGAAGTCATAAAGACAAAAGACGCTCAAGACTACGCCAGACTTGGGAATTTAGTATTGAAGGTTCATAAGAGTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGCTCTGCTTTTGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCTGCCGCCGTGAATGCGTTAGAGCACGGTGGGCAAATTGGGATGGTGTTTGAGATGTATAGAAGCGTGGCGGGGTTGTTGTGGCTGATGGAAGAATCCGTTAGAGGGACGCTGGAGGAGACAGATTGGGAGAAGAGGGAAAACGGGGAAGTGTTTGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTAGCTCAGCTCAGACAATTGGCTTCCAAATCCACCGCCGCTAGAACAGAAGGGATTTGCCTTCCCAATCTCCGTATCTCTGTTCCCAGACTCCCCAAAACCTCCACTGCCTCCCTCAAACTCATTGAAGAGCTTTGTTTAAACCAACCCCTTAATATCATTCCTCCTACCCAATCCCCCCTCACATCGCACCTCCACGCCATCTTGGACATCGTAGCCGACCGGGTAGAGATGCACAACAATATCTGCCAACAGCGAGACAACTGGAATTCCCTTTTCCTCAATTCCATCAACATGATCACTCTCGCTGCCTCTGTTATGGCCGCCACCGCACCCGCTGTCGGAGCCCTTGGAGCTCCTCTTTTGGGTTTGAAATTGTCCTCGGCTCTGCTCTTCTCTGCCGCAACAGGGATGTTGGTTATGGTTAACAAAATCCAACCCTCACAGCTGGCTGAGGAGCAGCGAAATGCAGCTAGATTGTTCAAGCAGCTCCAAACCCAAATCCAGACCTTGATTACGGTTGGAGCTCCCACTCAAAGGGACGTCGATTCCGCCATGGAAAAGGTGTTGGCGCTTGATAAAGCATACCCACTTCCTTTACTTGGTGTAATGCTTGAAAAATTCCCCAAAAAGCTCGAGCCGGCTTCATGGTGGCCCAATTCTTCTCATTCTGACGAATCTAAGACACAGAACGAAAACGCCCATTTTGATGGAAACCAACGACAAGGTTCCAATGGATGGAGCGATCAACTTGAAGCCGAAATGAGAGAAGTTGTTGAAGTCATGAAGACAAAAGACGCTAAAGACTACGTCAGACTTGGGAATTTAGTATTGAAGGTTAATAAAACTTTGGCAATCTCGGGCCCTCTTCTCACCGGCATTGCGGCTTTGGGTTCTGCTTTCGTGGGTGATTGGTCATCCGGGGGGATGGTGGTGGCGGCGGCGGCCGGTTCTTTGGCGGCCGCCGTGAATGCGTTAGAACACGGTGGGCAAATTGGGATGGTGTTTGAGATGTACAGAAACTCGGCGGGGTTCTTCGGGGTAATGGAGGAATCCATTAGAGGGACGCTTGAGGAGACAGATTGGGAGAAGAGGGAAAATGGGCAAGTGTTCGAAAGGAAGGTGGCTTTGAAATTGGGAAGAAGCTTATCTCAGCTCAGACAATTGGCTGCCAAATCTGCTGCGGCTAGACAAGAAGGGATTTCCATAGATGAATTCGCCAGCAAACTGTTC
Protein sequence
MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQPINVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICLPNLRISVPRLPKTSTASLKLIEELCLNQPLNIIPPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKLF
Homology
BLAST of Cp4.1LG10g09690 vs. ExPASy Swiss-Prot
Match:
O65451 (Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE=4 SV=1)
HSP 1 Score: 328.9 bits (842), Expect = 1.5e-88
Identity = 188/351 (53.56%), Postives = 251/351 (71.51%), Query Frame = 0
Query: 451 SHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGALGAPLL 510
S L A+L+ V DRVEMH NI +QR+NWNSL LNS+NMITL A++MA A + +
Sbjct: 86 SRLMAVLEEVIDRVEMHKNIGEQRNNWNSLLLNSVNMITLTAALMAGIASMNASGIDSVS 145
Query: 511 GLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLI---TVGAPTQ 570
+ ++S +L ++ATG+ ++NKIQPSQL EEQRNA RLFKQL+ +I+ ++ + ++
Sbjct: 146 AVSIASTVLLASATGLAALMNKIQPSQLVEEQRNATRLFKQLRNRIEMVLREKSEDGISE 205
Query: 571 RDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGN 630
DV A+++VL LDKAYPLPL+G MLEKFP++ +PA+WWP +T+ E H
Sbjct: 206 EDVKEAIKRVLCLDKAYPLPLVGTMLEKFPQEFKPATWWP--------ETKPEPTH---- 265
Query: 631 QRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGS 690
R +NGW+ +LE EMREVVEV+K++DA++Y +LGN+ LK+N+ LAISGP+LTGIAA+ S
Sbjct: 266 SRTEANGWNSELEMEMREVVEVIKSRDAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSS 325
Query: 691 AFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEE 750
F+G S VVA SLAA VN LEHGGQ+GMV EMYRNSAGFF +ME++I+
Sbjct: 326 GFIGHGSGLAGVVATTCASLAAVVNTLEHGGQVGMVVEMYRNSAGFFSLMEDTIK----- 385
Query: 751 TDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKL 799
E+RENGQVFE KVALKLGRSLS+LR LA +S+ +R +G S + S L
Sbjct: 386 --TERRENGQVFETKVALKLGRSLSELRDLARRSSLSRFDGSSWSKLPSDL 417
BLAST of Cp4.1LG10g09690 vs. NCBI nr
Match:
KAG7033956.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1445 bits (3740), Expect = 0.0
Identity = 778/837 (92.95%), Postives = 788/837 (94.15%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQP 60
MASLQSSFLLPSSSCSSRR IAPAAIHDPKLPNLRISVPTLPNTST SLNVIEQLCLNQP
Sbjct: 1 MASLQSSFLLPSSSCSSRRAIAPAAIHDPKLPNLRISVPTLPNTSTASLNVIEQLCLNQP 60
Query: 61 INVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 120
IN QSPF SHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV
Sbjct: 61 INAQSPFISHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 120
Query: 121 GALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITV 180
GALGAPLLGLKLSS LLFSAATGMLVV+NKIQPSQLAEEQRSAARLFKQLQ+QIETLITV
Sbjct: 121 GALGAPLLGLKLSSALLFSAATGMLVVLNKIQPSQLAEEQRSAARLFKQLQTQIETLITV 180
Query: 181 GAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENA 240
GAPTQRDVDSAMEKVLALD+AYPLPLLG MLEKFPKTLEPASWWPNSSHSYESKTENENA
Sbjct: 181 GAPTQRDVDSAMEKVLALDRAYPLPLLGAMLEKFPKTLEPASWWPNSSHSYESKTENENA 240
Query: 241 QFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 300
QFDGNQRQ SNGWSDELEAEMRE+VEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI
Sbjct: 241 QFDGNQRQGSNGWSDELEAEMREIVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 300
Query: 301 AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVR 360
AALGSAFVGDWS GGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGL+WLMEESVR
Sbjct: 301 AALGSAFVGDWSPGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLMWLMEESVR 360
Query: 361 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGIC------------ 420
GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGIC
Sbjct: 361 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICPPLDTSSKLVPT 420
Query: 421 --------------------------LPNLRISVPRLPKTSTASLKLIEELCLNQPLNII 480
LPNLR+SVPRLPKTSTASLKLIEELCLNQPLNII
Sbjct: 421 MASLQASFLLPSSRKTITQASIHVPKLPNLRVSVPRLPKTSTASLKLIEELCLNQPLNII 480
Query: 481 PPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAV 540
PPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAV
Sbjct: 481 PPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAV 540
Query: 541 GALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITV 600
GALGAPLLGLK SSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITV
Sbjct: 541 GALGAPLLGLKFSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITV 600
Query: 601 GAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENA 660
GAPTQRDVDSAMEKVLALD+AYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKT+NENA
Sbjct: 601 GAPTQRDVDSAMEKVLALDRAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTENENA 660
Query: 661 HFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGI 720
HFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGI
Sbjct: 661 HFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGI 720
Query: 721 AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIR 780
AALGSAFVGDWSS GMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIR
Sbjct: 721 AALGSAFVGDWSSAGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIR 780
Query: 781 GTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKLF 799
GTLEETDWEKRENG+VFERKVALKLGRSLSQLRQL AKSAAARQEGIS+DEFASKLF
Sbjct: 781 GTLEETDWEKRENGEVFERKVALKLGRSLSQLRQLGAKSAAARQEGISMDEFASKLF 837
BLAST of Cp4.1LG10g09690 vs. NCBI nr
Match:
KAA3452598.1 (putative F-box protein isoform X1 [Gossypium australe])
HSP 1 Score: 820 bits (2119), Expect = 3.31e-286
Identity = 491/843 (58.24%), Postives = 610/843 (72.36%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLP---------------NTS 60
MASLQ+S L SSS S++ A AI PKLP++R SVP +P NT+
Sbjct: 46 MASLQASNFLASSSSPSKQIHA--AISVPKLPSIRFSVPKVPTKSLSVELNTRDGFINTT 105
Query: 61 TPSLNVI-EQLCLNQPINVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSIN 120
NVI + Q + S T L+ IL++V DRVEMHN++ QR+NWN+LLLNSIN
Sbjct: 106 PFQKNVIGSETRPVQESSSASMATVQLYAILESVIDRVEMHNNVGQQRENWNTLLLNSIN 165
Query: 121 MITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAA 180
MITLTA+ MA A G G +LGLKL+STLLFSAATGMLV++NKIQPSQL EEQR+A
Sbjct: 166 MITLTAATMAGVT-ATGGAGVSVLGLKLASTLLFSAATGMLVMMNKIQPSQLVEEQRNAT 225
Query: 181 RLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWW 240
RLFKQLQ QIET++ +G+P++ +V AMEKVLALDKAYPLPLLG MLEKFP++LEPA WW
Sbjct: 226 RLFKQLQGQIETILAIGSPSKEEVKDAMEKVLALDKAYPLPLLGVMLEKFPESLEPAVWW 285
Query: 241 PNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVL 300
P + +++ N Q N + +SNGW++ELE EMR+VVEVIK KD++DY RLGN L
Sbjct: 286 PKT------QSQKTNKQKHSNGKVESNGWTEELELEMRQVVEVIKRKDSEDYERLGNKAL 345
Query: 301 KVHKSLAISGPLLTGIAALGSAFVGD----WSSGGMVVAAAAGSLAAAVNALEHGGQIGM 360
K++K LA SGPLLTGIAALGSAF+G W++ ++AA AG+LA+AVN EHGGQ+GM
Sbjct: 346 KMNKVLAASGPLLTGIAALGSAFMGPSNGPWAA---IMAAVAGALASAVNTFEHGGQVGM 405
Query: 361 VFEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKST 420
VFEMYR+ AG L++ES+ TL E+D EKRENGE+FE KVAL+LGRSL+QLR LA K T
Sbjct: 406 VFEMYRNNAGFFKLVQESIESTLSESDLEKRENGEMFEMKVALQLGRSLSQLRDLAKKPT 465
Query: 421 AARTEGIC--------LPNLRISVPRLPKTS-TASLKLIEELCLNQPL--NIIPPTQSPL 480
+ LP++R SVP++P S + L + P N+I P+
Sbjct: 466 FSSPSKQIHAAISVPKLPSIRFSVPKVPTRSLSVELNTRDGFVNTIPFEKNVIGSETRPV 525
Query: 481 ---------TSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAP 540
T L+AIL+ V DRVE+HNN+ QQR+NWN+L LNSINMITL A+ MA
Sbjct: 526 QESSFVAMATVQLYAILESVVDRVEIHNNVGQQRENWNALLLNSINMITLTAATMAGVT- 585
Query: 541 AVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLI 600
A G G +LGLKL+S LLFSAATGMLVM+NKIQPSQL EEQRNA RLFKQLQ QI+TL+
Sbjct: 586 ATGGAGVSVLGLKLASTLLFSAATGMLVMMNKIQPSQLVEEQRNATRLFKQLQGQIETLL 645
Query: 601 TVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNE 660
+G+P++ +V AMEKVLALDKAYPLPLLGVMLEKFP+ LEPA WWP + +S+ N+
Sbjct: 646 AIGSPSKEEVKDAMEKVLALDKAYPLPLLGVMLEKFPESLEPAVWWPKT----QSQKTNK 705
Query: 661 NAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLT 720
H +G + SNGW+++LE EMR+VVEV+K KD++DY RLGN LK+NK LA SGPLLT
Sbjct: 706 QKHSNG--KVESNGWTEELELEMRQVVEVIKRKDSEDYERLGNKALKMNKVLAASGPLLT 765
Query: 721 GIAALGSAFVGD----WSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGV 780
GIAALGSAF+G W++ ++AAAAG+LA+AVN EHGGQ+GMVFEMYRN+AGFF +
Sbjct: 766 GIAALGSAFMGPSNGPWAA---IMAAAAGALASAVNTFEHGGQVGMVFEMYRNNAGFFKL 825
Query: 781 MEESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFAS 799
++ESI L E+D EKRENG++FE KVAL+LGRS+SQLR LA KS +R EG IDEFAS
Sbjct: 826 VQESIESALSESDLEKRENGEMFEMKVALQLGRSVSQLRDLAKKSNYSRLEGNPIDEFAS 866
BLAST of Cp4.1LG10g09690 vs. NCBI nr
Match:
XP_023544283.1 (probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 768 bits (1982), Expect = 3.19e-272
Identity = 408/409 (99.76%), Postives = 409/409 (100.00%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQP 60
MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQP
Sbjct: 16 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQP 75
Query: 61 INVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 120
INVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV
Sbjct: 76 INVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 135
Query: 121 GALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITV 180
GALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITV
Sbjct: 136 GALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITV 195
Query: 181 GAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENA 240
GAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENA
Sbjct: 196 GAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENA 255
Query: 241 QFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 300
QFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI
Sbjct: 256 QFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 315
Query: 301 AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVR 360
AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVR
Sbjct: 316 AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVR 375
Query: 361 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICL 409
GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGIC+
Sbjct: 376 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICV 424
BLAST of Cp4.1LG10g09690 vs. NCBI nr
Match:
KAA3478546.1 (putative F-box protein [Gossypium australe])
HSP 1 Score: 787 bits (2033), Expect = 1.87e-268
Identity = 483/828 (58.33%), Postives = 584/828 (70.53%), Query Frame = 0
Query: 6 SSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTL--PNTSTPSLNVIEQLCLNQPI-- 65
S+F++ SSS S++ AAI PKLP++R S P L P + LN + PI
Sbjct: 408 SNFVVSSSSSSNQIR---AAISLPKLPSVRFSAPKLRKPTIQSEQLNSKDGFINTIPIQN 467
Query: 66 NVQSP-----------FTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTA 125
NV S T L+ IL+A+ DRVEMHN++ QRDNWN+LLLNSINMITLTA
Sbjct: 468 NVHSTPLVQQTSSVSMATIQLYAILEAIGDRVEMHNNIGEQRDNWNTLLLNSINMITLTA 527
Query: 126 SAMA--AAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFK 185
+ MA AAA VGA G ++GLKL+S+++FSAATGMLV++NKIQPSQL EEQR+A RLFK
Sbjct: 528 ATMAGVAAATGVGA-GVSVMGLKLASSVMFSAATGMLVLMNKIQPSQLVEEQRNATRLFK 587
Query: 186 QLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSS 245
QLQSQI+TL+ VG+P Q DV+ AMEKVLALDKAYPLPLLG ML+KFP +LEPA WWP +
Sbjct: 588 QLQSQIKTLLAVGSPCQDDVNDAMEKVLALDKAYPLPLLGVMLDKFPASLEPAVWWPTN- 647
Query: 246 HSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHK 305
+++N N N NGW+ ELE EMREVVEVIK KD++DY RLGN L ++K
Sbjct: 648 -----RSQNSNKALKKN-----NGWTKELEMEMREVVEVIKRKDSEDYERLGNKALNMNK 707
Query: 306 SLAISGPLLTGIAALGSAF-VGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRS 365
LA SGPLLTGIAALGSAF V S VAA AG+LA+AVN EHGGQ+GMVFEMYR+
Sbjct: 708 VLATSGPLLTGIAALGSAFMVSSNSPWAATVAAVAGALASAVNTFEHGGQVGMVFEMYRN 767
Query: 366 VAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGI 425
AG LM+ES+ TL+E D E RENGE+FE KVAL+LGRSL++LR +A KS+ +R EG
Sbjct: 768 NAGFFKLMQESIESTLDECDVENRENGELFEMKVALQLGRSLSELRDVAKKSSYSRIEGS 827
Query: 426 CLPNLR---ISVPRL--PKTSTASLK----LIEELCLNQPLNIIPPTQ-----SPLTSHL 485
+ S P+L PKT + L I + + ++ P Q S T L
Sbjct: 828 PMDEFASKLFSAPKLQQPKTQSDELNSKDGFINTIPIQNNVHSTPLVQQTSSVSMATFQL 887
Query: 486 HAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGA-LGAPLLGL 545
+AIL+ +ADRVEMHNNI +QRDNWN+L LNSINMITL A+ M A A G G +GL
Sbjct: 888 YAILEAIADRVEMHNNIGEQRDNWNTLLLNSINMITLTATTMVGVAAATGVGAGVSAMGL 947
Query: 546 KLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITVGAPTQRDVDS 605
KL+S+++FSAATGMLV++NKIQPSQL EEQRNA RLFKQLQ+QI+TL+ VG+P Q DV+
Sbjct: 948 KLASSVMFSAATGMLVLMNKIQPSQLVEEQRNATRLFKQLQSQIKTLLAVGSPCQDDVND 1007
Query: 606 AMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGNQRQGS 665
AMEKVLALDKAYPLPLLGVML+KFP LEPA WWP + +K N
Sbjct: 1008 AMEKVLALDKAYPLPLLGVMLDKFPASLEPAVWWPTKQSPNSNKALKNN----------- 1067
Query: 666 NGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGSAF-VG 725
NGW+ LE EMREVVEV+K KD++DY RLGN L NK L SGPLLTGIAALGS F V
Sbjct: 1068 NGWTKVLEMEMREVVEVIKRKDSEDYERLGNKAL--NKVLGTSGPLLTGIAALGSVFMVS 1127
Query: 726 DWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEETDWE 785
S VAA AG+LA+AVN EHGGQ+GMVFEMYRN+AGFF M+ESI TL+E D E
Sbjct: 1128 SNSPWAATVAAVAGALASAVNTFEHGGQVGMVFEMYRNNAGFFKHMQESIESTLDECDVE 1187
Query: 786 KRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKLF 799
KRENG++FE KVAL+LGRSL++LR +A KS+ +R EG +DEFASKLF
Sbjct: 1188 KRENGELFEMKVALQLGRSLAELRDVAKKSSYSRIEGSPMDEFASKLF 1207
BLAST of Cp4.1LG10g09690 vs. NCBI nr
Match:
KAF4399606.1 (hypothetical protein G4B88_022689 [Cannabis sativa])
HSP 1 Score: 771 bits (1991), Expect = 2.37e-267
Identity = 464/851 (54.52%), Postives = 597/851 (70.15%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLC-LNQ 60
M++LQ+S L+ SSS SSR TI AIH PKLPN+R +VP + + VIE+L L Q
Sbjct: 1 MSALQASSLILSSS-SSRVTIN-GAIHVPKLPNVRFTVPKKSSLNLTKQMVIEELNNLKQ 60
Query: 61 PINVQSP------------------FTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLN 120
N Q+ T+ L+ IL+AV DRVEMH+++ QRDNWN LLLN
Sbjct: 61 GFNTQNDDVYSNNNNNNANTSTSLTVTAQLYAILEAVNDRVEMHDNIGQQRDNWNKLLLN 120
Query: 121 SINMITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQR 180
SINMITLTA+ +A A A + G L L +SSTLLFSAA GM++V+NK+QPSQLAEEQR
Sbjct: 121 SINMITLTATTIAGVAAATASPGTSSLALNVSSTLLFSAAAGMVLVMNKLQPSQLAEEQR 180
Query: 181 SAARLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPA 240
+A+RLF+Q+++QIET I + +PT+ D+ M+KVL+LDKAYPLPLLG MLEKFP+ E +
Sbjct: 181 NASRLFRQIKTQIETDIALRSPTKYDLKKYMDKVLSLDKAYPLPLLGAMLEKFPQKYEAS 240
Query: 241 SWWPNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGN 300
+WWP+ K +NE+ Q + N NGW++ LE EMREV+EV+KTKD DY RLGN
Sbjct: 241 NWWPSKKSQ---KGQNESFQQENN-----NGWNESLEKEMREVIEVVKTKDRVDYERLGN 300
Query: 301 LVLKVHKSLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMV 360
LVLK++K+LAISGPLLTGIAA+ S FVG S G V+A AG+LA AVN +HGGQIGMV
Sbjct: 301 LVLKINKALAISGPLLTGIAAVSSPFVGHGSWAG-VLAVTAGALATAVNGFQHGGQIGMV 360
Query: 361 FEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTA 420
FE+YR+ G +E+ + T+ E ++EKRENGE+F+ K+ALKLGRSL+QL++L++KS +
Sbjct: 361 FELYRNCGGAFKHIEDEIEATIGEEEFEKRENGELFQVKLALKLGRSLSQLKELSAKSAS 420
Query: 421 ARTEG------------------ICLP----NLRISVPRLPKTSTASLKLIEEL-CLNQP 480
A + I +P N+R +VP+ + +IEEL L Q
Sbjct: 421 APLQASSLILSSSSSSRGTINGAIHIPKLPNNIRFTVPKKSSLNLTKQMVIEELNSLKQG 480
Query: 481 LNII-----------PPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINM 540
N T S +T+ L+AIL+ V DRVEMH+NI QQRDNWN+L LNSINM
Sbjct: 481 FNTQNDDVYNNNNANTSTSSTVTAQLYAILEAVNDRVEMHDNIGQQRDNWNTLLLNSINM 540
Query: 541 ITLAASVMAATAPAVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAAR 600
ITL A+ +A + A G LL L +SS LLFSAA GML+++NK+QPSQLAEEQRNA+R
Sbjct: 541 ITLTATTIAGVSTATAVPGTSLLALNVSSTLLFSAAAGMLLVMNKLQPSQLAEEQRNASR 600
Query: 601 LFKQLQTQIQTLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWP 660
LF+Q++TQI+T I + +PT+ D+ M+KVL+LDKAYPLPLLG MLEKFP+K E A+WWP
Sbjct: 601 LFRQIKTQIETDIALRSPTKYDLKKYMDKVLSLDKAYPLPLLGAMLEKFPQKYEAANWWP 660
Query: 661 NSSHSDESKTQNENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLK 720
+ K QNE+ Q+Q +NGW++ LE EMREVVEV+KTKD DY RLGNLVLK
Sbjct: 661 SKKSQ---KGQNESF-----QQQNNNGWNESLEKEMREVVEVVKTKDRVDYERLGNLVLK 720
Query: 721 VNKTLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMY 780
+NK LAISGPLLTGIAA+ S FVG S G V+A AG+LA AVN +HGGQ+GMVFE+Y
Sbjct: 721 INKALAISGPLLTGIAAVSSPFVGHGSWAG-VLAVTAGALATAVNGFQHGGQVGMVFELY 780
Query: 781 RNSAGFFGVMEESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQE 798
RN G F ++E+ I TL E ++EKRENG++F+ K+ALKLGRSLSQL +LAAKSA++R
Sbjct: 781 RNCGGAFKLVEDEIEATLAEQEFEKRENGELFKMKLALKLGRSLSQLDELAAKSASSRAN 831
BLAST of Cp4.1LG10g09690 vs. ExPASy TrEMBL
Match:
A0A5B6U5G3 (Putative F-box protein isoform X1 OS=Gossypium australe OX=47621 GN=EPI10_034504 PE=4 SV=1)
HSP 1 Score: 820 bits (2119), Expect = 1.60e-286
Identity = 491/843 (58.24%), Postives = 610/843 (72.36%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLP---------------NTS 60
MASLQ+S L SSS S++ A AI PKLP++R SVP +P NT+
Sbjct: 46 MASLQASNFLASSSSPSKQIHA--AISVPKLPSIRFSVPKVPTKSLSVELNTRDGFINTT 105
Query: 61 TPSLNVI-EQLCLNQPINVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSIN 120
NVI + Q + S T L+ IL++V DRVEMHN++ QR+NWN+LLLNSIN
Sbjct: 106 PFQKNVIGSETRPVQESSSASMATVQLYAILESVIDRVEMHNNVGQQRENWNTLLLNSIN 165
Query: 121 MITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAA 180
MITLTA+ MA A G G +LGLKL+STLLFSAATGMLV++NKIQPSQL EEQR+A
Sbjct: 166 MITLTAATMAGVT-ATGGAGVSVLGLKLASTLLFSAATGMLVMMNKIQPSQLVEEQRNAT 225
Query: 181 RLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWW 240
RLFKQLQ QIET++ +G+P++ +V AMEKVLALDKAYPLPLLG MLEKFP++LEPA WW
Sbjct: 226 RLFKQLQGQIETILAIGSPSKEEVKDAMEKVLALDKAYPLPLLGVMLEKFPESLEPAVWW 285
Query: 241 PNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVL 300
P + +++ N Q N + +SNGW++ELE EMR+VVEVIK KD++DY RLGN L
Sbjct: 286 PKT------QSQKTNKQKHSNGKVESNGWTEELELEMRQVVEVIKRKDSEDYERLGNKAL 345
Query: 301 KVHKSLAISGPLLTGIAALGSAFVGD----WSSGGMVVAAAAGSLAAAVNALEHGGQIGM 360
K++K LA SGPLLTGIAALGSAF+G W++ ++AA AG+LA+AVN EHGGQ+GM
Sbjct: 346 KMNKVLAASGPLLTGIAALGSAFMGPSNGPWAA---IMAAVAGALASAVNTFEHGGQVGM 405
Query: 361 VFEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKST 420
VFEMYR+ AG L++ES+ TL E+D EKRENGE+FE KVAL+LGRSL+QLR LA K T
Sbjct: 406 VFEMYRNNAGFFKLVQESIESTLSESDLEKRENGEMFEMKVALQLGRSLSQLRDLAKKPT 465
Query: 421 AARTEGIC--------LPNLRISVPRLPKTS-TASLKLIEELCLNQPL--NIIPPTQSPL 480
+ LP++R SVP++P S + L + P N+I P+
Sbjct: 466 FSSPSKQIHAAISVPKLPSIRFSVPKVPTRSLSVELNTRDGFVNTIPFEKNVIGSETRPV 525
Query: 481 ---------TSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAP 540
T L+AIL+ V DRVE+HNN+ QQR+NWN+L LNSINMITL A+ MA
Sbjct: 526 QESSFVAMATVQLYAILESVVDRVEIHNNVGQQRENWNALLLNSINMITLTAATMAGVT- 585
Query: 541 AVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLI 600
A G G +LGLKL+S LLFSAATGMLVM+NKIQPSQL EEQRNA RLFKQLQ QI+TL+
Sbjct: 586 ATGGAGVSVLGLKLASTLLFSAATGMLVMMNKIQPSQLVEEQRNATRLFKQLQGQIETLL 645
Query: 601 TVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNE 660
+G+P++ +V AMEKVLALDKAYPLPLLGVMLEKFP+ LEPA WWP + +S+ N+
Sbjct: 646 AIGSPSKEEVKDAMEKVLALDKAYPLPLLGVMLEKFPESLEPAVWWPKT----QSQKTNK 705
Query: 661 NAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLT 720
H +G + SNGW+++LE EMR+VVEV+K KD++DY RLGN LK+NK LA SGPLLT
Sbjct: 706 QKHSNG--KVESNGWTEELELEMRQVVEVIKRKDSEDYERLGNKALKMNKVLAASGPLLT 765
Query: 721 GIAALGSAFVGD----WSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGV 780
GIAALGSAF+G W++ ++AAAAG+LA+AVN EHGGQ+GMVFEMYRN+AGFF +
Sbjct: 766 GIAALGSAFMGPSNGPWAA---IMAAAAGALASAVNTFEHGGQVGMVFEMYRNNAGFFKL 825
Query: 781 MEESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFAS 799
++ESI L E+D EKRENG++FE KVAL+LGRS+SQLR LA KS +R EG IDEFAS
Sbjct: 826 VQESIESALSESDLEKRENGEMFEMKVALQLGRSVSQLRDLAKKSNYSRLEGNPIDEFAS 866
BLAST of Cp4.1LG10g09690 vs. ExPASy TrEMBL
Match:
A0A5B6WB13 (Putative F-box protein OS=Gossypium australe OX=47621 GN=EPI10_012337 PE=4 SV=1)
HSP 1 Score: 787 bits (2033), Expect = 9.06e-269
Identity = 483/828 (58.33%), Postives = 584/828 (70.53%), Query Frame = 0
Query: 6 SSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTL--PNTSTPSLNVIEQLCLNQPI-- 65
S+F++ SSS S++ AAI PKLP++R S P L P + LN + PI
Sbjct: 408 SNFVVSSSSSSNQIR---AAISLPKLPSVRFSAPKLRKPTIQSEQLNSKDGFINTIPIQN 467
Query: 66 NVQSP-----------FTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTA 125
NV S T L+ IL+A+ DRVEMHN++ QRDNWN+LLLNSINMITLTA
Sbjct: 468 NVHSTPLVQQTSSVSMATIQLYAILEAIGDRVEMHNNIGEQRDNWNTLLLNSINMITLTA 527
Query: 126 SAMA--AAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFK 185
+ MA AAA VGA G ++GLKL+S+++FSAATGMLV++NKIQPSQL EEQR+A RLFK
Sbjct: 528 ATMAGVAAATGVGA-GVSVMGLKLASSVMFSAATGMLVLMNKIQPSQLVEEQRNATRLFK 587
Query: 186 QLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSS 245
QLQSQI+TL+ VG+P Q DV+ AMEKVLALDKAYPLPLLG ML+KFP +LEPA WWP +
Sbjct: 588 QLQSQIKTLLAVGSPCQDDVNDAMEKVLALDKAYPLPLLGVMLDKFPASLEPAVWWPTN- 647
Query: 246 HSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHK 305
+++N N N NGW+ ELE EMREVVEVIK KD++DY RLGN L ++K
Sbjct: 648 -----RSQNSNKALKKN-----NGWTKELEMEMREVVEVIKRKDSEDYERLGNKALNMNK 707
Query: 306 SLAISGPLLTGIAALGSAF-VGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRS 365
LA SGPLLTGIAALGSAF V S VAA AG+LA+AVN EHGGQ+GMVFEMYR+
Sbjct: 708 VLATSGPLLTGIAALGSAFMVSSNSPWAATVAAVAGALASAVNTFEHGGQVGMVFEMYRN 767
Query: 366 VAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGI 425
AG LM+ES+ TL+E D E RENGE+FE KVAL+LGRSL++LR +A KS+ +R EG
Sbjct: 768 NAGFFKLMQESIESTLDECDVENRENGELFEMKVALQLGRSLSELRDVAKKSSYSRIEGS 827
Query: 426 CLPNLR---ISVPRL--PKTSTASLK----LIEELCLNQPLNIIPPTQ-----SPLTSHL 485
+ S P+L PKT + L I + + ++ P Q S T L
Sbjct: 828 PMDEFASKLFSAPKLQQPKTQSDELNSKDGFINTIPIQNNVHSTPLVQQTSSVSMATFQL 887
Query: 486 HAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGA-LGAPLLGL 545
+AIL+ +ADRVEMHNNI +QRDNWN+L LNSINMITL A+ M A A G G +GL
Sbjct: 888 YAILEAIADRVEMHNNIGEQRDNWNTLLLNSINMITLTATTMVGVAAATGVGAGVSAMGL 947
Query: 546 KLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITVGAPTQRDVDS 605
KL+S+++FSAATGMLV++NKIQPSQL EEQRNA RLFKQLQ+QI+TL+ VG+P Q DV+
Sbjct: 948 KLASSVMFSAATGMLVLMNKIQPSQLVEEQRNATRLFKQLQSQIKTLLAVGSPCQDDVND 1007
Query: 606 AMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGNQRQGS 665
AMEKVLALDKAYPLPLLGVML+KFP LEPA WWP + +K N
Sbjct: 1008 AMEKVLALDKAYPLPLLGVMLDKFPASLEPAVWWPTKQSPNSNKALKNN----------- 1067
Query: 666 NGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGSAF-VG 725
NGW+ LE EMREVVEV+K KD++DY RLGN L NK L SGPLLTGIAALGS F V
Sbjct: 1068 NGWTKVLEMEMREVVEVIKRKDSEDYERLGNKAL--NKVLGTSGPLLTGIAALGSVFMVS 1127
Query: 726 DWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEETDWE 785
S VAA AG+LA+AVN EHGGQ+GMVFEMYRN+AGFF M+ESI TL+E D E
Sbjct: 1128 SNSPWAATVAAVAGALASAVNTFEHGGQVGMVFEMYRNNAGFFKHMQESIESTLDECDVE 1187
Query: 786 KRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKLF 799
KRENG++FE KVAL+LGRSL++LR +A KS+ +R EG +DEFASKLF
Sbjct: 1188 KRENGELFEMKVALQLGRSLAELRDVAKKSSYSRIEGSPMDEFASKLF 1207
BLAST of Cp4.1LG10g09690 vs. ExPASy TrEMBL
Match:
A0A6N2KGT6 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS85825 PE=4 SV=1)
HSP 1 Score: 774 bits (1999), Expect = 4.54e-268
Identity = 480/877 (54.73%), Postives = 586/877 (66.82%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCS-SRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIE------ 60
M SLQ+S L SS+CS S RT A AI KLP + S P +P LN+ +
Sbjct: 44 MTSLQASSFLFSSTCSCSTRTHA--AITVAKLPRIPFSAPKIPLKPVEDLNLRDGFKGKI 103
Query: 61 QLCLNQPIN------VQSPF--------TSHLHHILDAVADRVEMHNDLHLQRDNWNSLL 120
L N P N ++P T+ L+ IL+AV DRVEMH ++ QRDNWN LL
Sbjct: 104 PLENNDPANSTGLDQYEAPIISTTSTTATAKLYAILEAVGDRVEMHGNIGEQRDNWNKLL 163
Query: 121 LNSINMITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEE 180
+NSINMITLTA+ MA A A GA GAPLL LKLSSTLLFSAATGM +++NKIQPSQLAEE
Sbjct: 164 MNSINMITLTAATMAGVA-AGGAAGAPLLALKLSSTLLFSAATGMSIIMNKIQPSQLAEE 223
Query: 181 QRSAARLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLE 240
QR+A RLFKQL SQI+ + PT DV+ AM++VLALD+AYPLPLLG M+EKFP+ E
Sbjct: 224 QRNATRLFKQLYSQIKNTLAAHDPTDTDVEDAMDRVLALDEAYPLPLLGKMIEKFPEKFE 283
Query: 241 PASWWPNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARL 300
PA WWP ++ S+ K + + +G NGWS+++E EMR V+EVIK KD++DY RL
Sbjct: 284 PAVWWPQTNKSHSRK----HVKAEG-----KNGWSEDVEEEMRAVIEVIKRKDSEDYMRL 343
Query: 301 GNLVLKVHKSLAISGPLLTGIAALGSAFVG--DWSSGGMVVAAAAGSLAAAVNALEHGGQ 360
GNL LKV+K LA+SGPLLT IAA GSAFVG W++ +VA AG+LA+ VN EHGGQ
Sbjct: 344 GNLALKVNKILAVSGPLLTAIAAAGSAFVGHGSWAA---IVAVTAGALASTVNTFEHGGQ 403
Query: 361 IGMVFEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLAS 420
+GMV EMYR+ AG L+EES+ T++E D E+RE+GE+ E VALKLGRSL+QLR LA
Sbjct: 404 VGMVVEMYRNCAGFFILLEESIESTIQEKDLEEREDGEISEMNVALKLGRSLSQLRDLAR 463
Query: 421 K--STAARTEGICLP--------------------------------NLRISVPRLPKT- 480
K S+++ +G + N ISVP+LP+
Sbjct: 464 KPSSSSSHLDGSTIDESIKETPFYNMASLGASCLLFSSSSYCCSKGINAAISVPKLPRIR 523
Query: 481 ---STASLKLIEELCL-----------NQPLNIIPP----TQSPLTSHLHAILDIVADRV 540
+ LKL+EEL L N L+ P T + ++ L+AIL+ VADRV
Sbjct: 524 FSGTKTPLKLVEELNLRNGFTGKFPSENTGLDQYEPIKSTTSTATSAKLYAILEAVADRV 583
Query: 541 EMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGALGAPLLGLKLSSALLFSAAT 600
EMH NI +QRDNWN+L LNSINMITL A M A GAP+L LKLSS LLFSAAT
Sbjct: 584 EMHKNIGEQRDNWNTLLLNSINMITLTAVTMVGVAA-----GAPVLALKLSSTLLFSAAT 643
Query: 601 GMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLITVGAPTQRDVDSAMEKVLALDKAY 660
GML+++NKIQPSQLAEEQRNA RLFKQL +QIQT + + PT+ DV AMEK LALDKAY
Sbjct: 644 GMLIIMNKIQPSQLAEEQRNATRLFKQLHSQIQTTLALRDPTELDVKDAMEKTLALDKAY 703
Query: 661 PLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGNQRQGSNGWSDQLEAEMR 720
PLPLLG M+EKFP+K EPA WWP S S + ++ QG NGWS+ E EMR
Sbjct: 704 PLPLLGKMIEKFPEKFEPAVWWPKSHESPRKQ----------HKTQGKNGWSEDFEEEMR 763
Query: 721 EVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGSAFVG--DWSSGGMVVAA 780
EV+EV+K KD++DY RLGNL LKVNK LA+SGPLLTGIAA GSAFVG W + +VA
Sbjct: 764 EVIEVIKKKDSEDYTRLGNLALKVNKILAVSGPLLTGIAAAGSAFVGHGSWPA---IVAV 823
Query: 781 AAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEETDWEKRENGQVFERK 799
AG LA+ VN EHGGQ+GMV EMYRNSAGFF +MEESI T++E E+RE+ ++FE
Sbjct: 824 TAGVLASTVNTFEHGGQVGMVVEMYRNSAGFFTLMEESIGSTIQEEGLEEREDEEMFEMN 883
BLAST of Cp4.1LG10g09690 vs. ExPASy TrEMBL
Match:
A0A7J6HWL6 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_022689 PE=4 SV=1)
HSP 1 Score: 771 bits (1991), Expect = 1.15e-267
Identity = 464/851 (54.52%), Postives = 597/851 (70.15%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLC-LNQ 60
M++LQ+S L+ SSS SSR TI AIH PKLPN+R +VP + + VIE+L L Q
Sbjct: 1 MSALQASSLILSSS-SSRVTIN-GAIHVPKLPNVRFTVPKKSSLNLTKQMVIEELNNLKQ 60
Query: 61 PINVQSP------------------FTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLN 120
N Q+ T+ L+ IL+AV DRVEMH+++ QRDNWN LLLN
Sbjct: 61 GFNTQNDDVYSNNNNNNANTSTSLTVTAQLYAILEAVNDRVEMHDNIGQQRDNWNKLLLN 120
Query: 121 SINMITLTASAMAAAAPAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQR 180
SINMITLTA+ +A A A + G L L +SSTLLFSAA GM++V+NK+QPSQLAEEQR
Sbjct: 121 SINMITLTATTIAGVAAATASPGTSSLALNVSSTLLFSAAAGMVLVMNKLQPSQLAEEQR 180
Query: 181 SAARLFKQLQSQIETLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPA 240
+A+RLF+Q+++QIET I + +PT+ D+ M+KVL+LDKAYPLPLLG MLEKFP+ E +
Sbjct: 181 NASRLFRQIKTQIETDIALRSPTKYDLKKYMDKVLSLDKAYPLPLLGAMLEKFPQKYEAS 240
Query: 241 SWWPNSSHSYESKTENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGN 300
+WWP+ K +NE+ Q + N NGW++ LE EMREV+EV+KTKD DY RLGN
Sbjct: 241 NWWPSKKSQ---KGQNESFQQENN-----NGWNESLEKEMREVIEVVKTKDRVDYERLGN 300
Query: 301 LVLKVHKSLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMV 360
LVLK++K+LAISGPLLTGIAA+ S FVG S G V+A AG+LA AVN +HGGQIGMV
Sbjct: 301 LVLKINKALAISGPLLTGIAAVSSPFVGHGSWAG-VLAVTAGALATAVNGFQHGGQIGMV 360
Query: 361 FEMYRSVAGLLWLMEESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTA 420
FE+YR+ G +E+ + T+ E ++EKRENGE+F+ K+ALKLGRSL+QL++L++KS +
Sbjct: 361 FELYRNCGGAFKHIEDEIEATIGEEEFEKRENGELFQVKLALKLGRSLSQLKELSAKSAS 420
Query: 421 ARTEG------------------ICLP----NLRISVPRLPKTSTASLKLIEEL-CLNQP 480
A + I +P N+R +VP+ + +IEEL L Q
Sbjct: 421 APLQASSLILSSSSSSRGTINGAIHIPKLPNNIRFTVPKKSSLNLTKQMVIEELNSLKQG 480
Query: 481 LNII-----------PPTQSPLTSHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINM 540
N T S +T+ L+AIL+ V DRVEMH+NI QQRDNWN+L LNSINM
Sbjct: 481 FNTQNDDVYNNNNANTSTSSTVTAQLYAILEAVNDRVEMHDNIGQQRDNWNTLLLNSINM 540
Query: 541 ITLAASVMAATAPAVGALGAPLLGLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAAR 600
ITL A+ +A + A G LL L +SS LLFSAA GML+++NK+QPSQLAEEQRNA+R
Sbjct: 541 ITLTATTIAGVSTATAVPGTSLLALNVSSTLLFSAAAGMLLVMNKLQPSQLAEEQRNASR 600
Query: 601 LFKQLQTQIQTLITVGAPTQRDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWP 660
LF+Q++TQI+T I + +PT+ D+ M+KVL+LDKAYPLPLLG MLEKFP+K E A+WWP
Sbjct: 601 LFRQIKTQIETDIALRSPTKYDLKKYMDKVLSLDKAYPLPLLGAMLEKFPQKYEAANWWP 660
Query: 661 NSSHSDESKTQNENAHFDGNQRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLK 720
+ K QNE+ Q+Q +NGW++ LE EMREVVEV+KTKD DY RLGNLVLK
Sbjct: 661 SKKSQ---KGQNESF-----QQQNNNGWNESLEKEMREVVEVVKTKDRVDYERLGNLVLK 720
Query: 721 VNKTLAISGPLLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMY 780
+NK LAISGPLLTGIAA+ S FVG S G V+A AG+LA AVN +HGGQ+GMVFE+Y
Sbjct: 721 INKALAISGPLLTGIAAVSSPFVGHGSWAG-VLAVTAGALATAVNGFQHGGQVGMVFELY 780
Query: 781 RNSAGFFGVMEESIRGTLEETDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQE 798
RN G F ++E+ I TL E ++EKRENG++F+ K+ALKLGRSLSQL +LAAKSA++R
Sbjct: 781 RNCGGAFKLVEDEIEATLAEQEFEKRENGELFKMKLALKLGRSLSQLDELAAKSASSRAN 831
BLAST of Cp4.1LG10g09690 vs. ExPASy TrEMBL
Match:
A0A6J1GES3 (probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453268 PE=4 SV=1)
HSP 1 Score: 747 bits (1929), Expect = 9.73e-265
Identity = 396/409 (96.82%), Postives = 402/409 (98.29%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTPSLNVIEQLCLNQP 60
MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTST SLNVIEQLCLNQP
Sbjct: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTSTASLNVIEQLCLNQP 60
Query: 61 INVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 120
IN QSPF SHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV
Sbjct: 61 INAQSPFISHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAAAPAV 120
Query: 121 GALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIETLITV 180
GALGAPLLGLKLSS LLFSAATGMLVV+NKIQPSQLAEEQRSAARLFKQLQ+QI+TLITV
Sbjct: 121 GALGAPLLGLKLSSALLFSAATGMLVVLNKIQPSQLAEEQRSAARLFKQLQAQIQTLITV 180
Query: 181 GAPTQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKTENENA 240
GAPTQRDVDSAMEKVLALDKAYPLPLLG MLEKFPKTLEPASWWPNSSHSYESKTENENA
Sbjct: 181 GAPTQRDVDSAMEKVLALDKAYPLPLLGAMLEKFPKTLEPASWWPNSSHSYESKTENENA 240
Query: 241 QFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 300
QFDGNQRQ SNGWSDELEAEMRE+VEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI
Sbjct: 241 QFDGNQRQGSNGWSDELEAEMREIVEVIKTKDAQDYARLGNLVLKVHKSLAISGPLLTGI 300
Query: 301 AALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLMEESVR 360
AALGSAFVGDWS GGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGL+WLMEESVR
Sbjct: 301 AALGSAFVGDWSPGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLIWLMEESVR 360
Query: 361 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICL 409
GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGIC+
Sbjct: 361 GTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTEGICV 409
BLAST of Cp4.1LG10g09690 vs. TAIR 10
Match:
AT4G04480.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: F-box family protein with a domain of unknown function (DUF295) (TAIR:AT4G22030.1); Has 78 Blast hits to 78 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 335.1 bits (858), Expect = 1.5e-91
Identity = 202/410 (49.27%), Postives = 276/410 (67.32%), Query Frame = 0
Query: 1 MASLQSSFLLPSSSCSSRRTIAPAAIHDPKLPNLRISVPTLPNTST--PSLNVIEQ--LC 60
MASLQ S L+ SSS SS R AA+ PKLP +SVP +P S PS +E L
Sbjct: 1 MASLQVSRLVLSSSSSSTR--PKAAVSIPKLPKFHVSVPKIPTLSVKEPSFEFVESLPLS 60
Query: 61 LNQPINVQSPFTSHLHHILDAVADRVEMHNDLHLQRDNWNSLLLNSINMITLTASAMAAA 120
L Q S + L+ +L+ V DR+EMH ++ QR+NWNSLLLNS+NMITLTA+ MA
Sbjct: 61 LKQKRGSDSIQRTRLNAVLEEVMDRIEMHKNIGDQRNNWNSLLLNSVNMITLTAALMAGI 120
Query: 121 APAVGALGAPLLGLKLSSTLLFSAATGMLVVVNKIQPSQLAEEQRSAARLFKQLQSQIET 180
A G + +K++ST+L ++ATG +++KIQPSQLAEEQR+A RLFK+L+ +IE
Sbjct: 121 ASVNGHGVDSVTAVKIASTVLLTSATGFAALMSKIQPSQLAEEQRNATRLFKKLRVEIEM 180
Query: 181 LITVGAP-TQRDVDSAMEKVLALDKAYPLPLLGGMLEKFPKTLEPASWWPNSSHSYESKT 240
+ + DV +++VL+LDKAYPLPL+G MLEKFP+ +PA+WWP E+K
Sbjct: 181 FLRENEEIEEEDVKEVIKRVLSLDKAYPLPLIGTMLEKFPEEFKPATWWP------ENKE 240
Query: 241 ENENAQFDGNQRQDSNGWSDELEAEMREVVEVIKTKDAQDYARLGNLVLKVHKSLAISGP 300
+N +NGWS ELEAEMREV V+K++DA++Y +LG++ LK+++ LAISGP
Sbjct: 241 KNPKTSL-------ANGWSQELEAEMREVAHVVKSRDAEEYEKLGHVALKLNRFLAISGP 300
Query: 301 LLTGIAALGSAFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRSVAGLLWLM 360
+LTG++A+ S F+G S +VA SLAA VN LEHGGQ+GMVFEMYR+ AG L+
Sbjct: 301 VLTGVSAVSSVFIGQDSGLAGIVAMTCASLAAVVNTLEHGGQVGMVFEMYRNSAGFFSLL 360
Query: 361 EESVRGTLEETDWEKRENGEVFERKVALKLGRSLAQLRQLASKSTAARTE 406
EE+++ T EKRENG+VFE +VA+KLGRSL++LR LA +S ++ +
Sbjct: 361 EETMKST------EKRENGQVFETRVAVKLGRSLSELRDLAKRSNLSQVK 389
BLAST of Cp4.1LG10g09690 vs. TAIR 10
Match:
AT4G22030.1 (F-box family protein with a domain of unknown function (DUF295) )
HSP 1 Score: 328.9 bits (842), Expect = 1.1e-89
Identity = 188/351 (53.56%), Postives = 251/351 (71.51%), Query Frame = 0
Query: 451 SHLHAILDIVADRVEMHNNICQQRDNWNSLFLNSINMITLAASVMAATAPAVGALGAPLL 510
S L A+L+ V DRVEMH NI +QR+NWNSL LNS+NMITL A++MA A + +
Sbjct: 86 SRLMAVLEEVIDRVEMHKNIGEQRNNWNSLLLNSVNMITLTAALMAGIASMNASGIDSVS 145
Query: 511 GLKLSSALLFSAATGMLVMVNKIQPSQLAEEQRNAARLFKQLQTQIQTLI---TVGAPTQ 570
+ ++S +L ++ATG+ ++NKIQPSQL EEQRNA RLFKQL+ +I+ ++ + ++
Sbjct: 146 AVSIASTVLLASATGLAALMNKIQPSQLVEEQRNATRLFKQLRNRIEMVLREKSEDGISE 205
Query: 571 RDVDSAMEKVLALDKAYPLPLLGVMLEKFPKKLEPASWWPNSSHSDESKTQNENAHFDGN 630
DV A+++VL LDKAYPLPL+G MLEKFP++ +PA+WWP +T+ E H
Sbjct: 206 EDVKEAIKRVLCLDKAYPLPLVGTMLEKFPQEFKPATWWP--------ETKPEPTH---- 265
Query: 631 QRQGSNGWSDQLEAEMREVVEVMKTKDAKDYVRLGNLVLKVNKTLAISGPLLTGIAALGS 690
R +NGW+ +LE EMREVVEV+K++DA++Y +LGN+ LK+N+ LAISGP+LTGIAA+ S
Sbjct: 266 SRTEANGWNSELEMEMREVVEVIKSRDAEEYEKLGNVALKLNRVLAISGPVLTGIAAVSS 325
Query: 691 AFVGDWSSGGMVVAAAAGSLAAAVNALEHGGQIGMVFEMYRNSAGFFGVMEESIRGTLEE 750
F+G S VVA SLAA VN LEHGGQ+GMV EMYRNSAGFF +ME++I+
Sbjct: 326 GFIGHGSGLAGVVATTCASLAAVVNTLEHGGQVGMVVEMYRNSAGFFSLMEDTIK----- 385
Query: 751 TDWEKRENGQVFERKVALKLGRSLSQLRQLAAKSAAARQEGISIDEFASKL 799
E+RENGQVFE KVALKLGRSLS+LR LA +S+ +R +G S + S L
Sbjct: 386 --TERRENGQVFETKVALKLGRSLSELRDLARRSSLSRFDGSSWSKLPSDL 417
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
O65451 | 1.5e-88 | 53.56 | Probable F-box protein At4g22030 OS=Arabidopsis thaliana OX=3702 GN=At4g22030 PE... | [more] |
Match Name | E-value | Identity | Description | |
KAG7033956.1 | 0.0 | 92.95 | putative F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
KAA3452598.1 | 3.31e-286 | 58.24 | putative F-box protein isoform X1 [Gossypium australe] | [more] |
XP_023544283.1 | 3.19e-272 | 99.76 | probable F-box protein At4g22030 [Cucurbita pepo subsp. pepo] | [more] |
KAA3478546.1 | 1.87e-268 | 58.33 | putative F-box protein [Gossypium australe] | [more] |
KAF4399606.1 | 2.37e-267 | 54.52 | hypothetical protein G4B88_022689 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5B6U5G3 | 1.60e-286 | 58.24 | Putative F-box protein isoform X1 OS=Gossypium australe OX=47621 GN=EPI10_034504... | [more] |
A0A5B6WB13 | 9.06e-269 | 58.33 | Putative F-box protein OS=Gossypium australe OX=47621 GN=EPI10_012337 PE=4 SV=1 | [more] |
A0A6N2KGT6 | 4.54e-268 | 54.73 | Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS85825 PE=4 SV=1 | [more] |
A0A7J6HWL6 | 1.15e-267 | 54.52 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_022689 PE=4 SV=1 | [more] |
A0A6J1GES3 | 9.73e-265 | 96.82 | probable F-box protein At4g22030 OS=Cucurbita moschata OX=3662 GN=LOC111453268 P... | [more] |
Match Name | E-value | Identity | Description | |
AT4G04480.1 | 1.5e-91 | 49.27 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: flower, pollen tube; EXP... | [more] |
AT4G22030.1 | 1.1e-89 | 53.56 | F-box family protein with a domain of unknown function (DUF295) | [more] |