Cp4.1LG10g07940 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g07940
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	trihelix transcription factor GT-3b-like
Location	Cp4.1LG10: 5403241 .. 5405645 (+)
RNA-Seq Expression	Cp4.1LG10g07940
Synteny	Cp4.1LG10g07940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATGAATTTTAAAATAAAATTCAGTTAAAATTATATATATATTTTATTGTAAGCGTGACGACATGTCGACGAAATAGATGACACATAAGAAAATCGCGTGAAAGGATAAAGACGCTATATCGCACTGCACAAAAACTCACTCAGCTTTGTACGCTTTCATACGCCGATTAATTGACGTACCAAATCGTCCTTCTCTAATCTCTCTCTCTCCGCGGGGCGATCTTTCTTTCAAAAGCGGAGATCGACGAACCGGATCTCTCTGCGATTGCGATGGAGGATTGCGATCGCCGTGCTTTTCTTCACCGACGAACGAATCGAATCGGCGTCAATGCGGAGGCGGCAGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTAGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAACAGAATGCTTTGGATTTCGGTCGCCGGTAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAATCTCGTCACGCGCTATAAGGTAATGGATCTTTTGGTGAGCGCGTGATTTTCTTTTAGGGTTTTTGGTAACCGCTAAGGGATATTATCAAAATATTTATTCTTTTACAATTTATTTAAGTTAATGATTTGATTACTAATTTTTTAAAATTATAAATTTTATTCACTGATTTACAATTTTTTTTTATTATTATAAAGAATTACTATACACTAAATTAACTTTTTTTTTACCATTCCAAGTGGATGTTTATTGAAATTGAATAAATATAAGAACTATTGTTATATTTTTTATTTTTGAAAATTGGGTTTGTTTTTTCACATTATAATCTAAATTTAAATATATTAACAATATTATAATTATTGAAGTTTTCCATTAATATATAAATTACCAAGAAAATAACTTATAAAACATATTTATTTTTAATAAGAATTAAATAAAACAAAAAAATATTATCAAAACACAGTTATAAATTTAAAAAGTGATTTTTTTTTAAAGAACCATTCAAAATTTGAGGTTAATTAGGTGGTAATCCTAATCGGGTTGACCCAATAAAAAAATCTTCAAACCAAACCGAATTTTCAGAGTTTTTAAACATTCGGCCCAACCTAAATCAGGAAGAAAAAAAACTTAACTCAATCCAATCTTTATGATTTAGATTGAGTAGTCTACATTAACATTACTGGGTTATATAAACTAAGTAGTCTAGTCTAGGTTAGTTGTGTTACTGGGTTATATGAATTAAGTAGTCTAAGTTAGTTGTGTTACTGGGTTATATGAACTGAGTAGTCTAGGTTAGTTGTGTTTCTGGGCTATACGAGTAGTCTAGGTTAATTGTGTTACTGGGTTATGGGTTATATGAACTGAGTAGTCTAAGTTAGTTGGGTTACTAGGTTATATGAATTGAGTAGTCTAGGTTAGTTGTGTTACTGGGTTATATGAACGGAGTAGTCTAGGTTAATTGTGTTACTGGGTTATGGGTTATATGAATTGAGTAGTCTAGGTTAGTTGTGTTACTCGGTTATATGAACTGAGTAGTCTTCTAGGTTAGTTATGTTACTGGGTTATAGGTTACTTGTGTTACTGGGTTATATGAACGCTCTTAGAGAGACATAATTTACCTTCAAATATGAATAGAGAACTTATTATCAAAGGTGGGTTCGAGAGGCAGAAGATCAAATCCTTCTTATCCCGACCCTACATGTTGTTGAACTAAAAAAATATACGAGCACCAAGATTTTGACTTGTATGACGTTCTCATCAATTAATTTTCACATCTCTTTTTCCTTCGTTCTCTTTACTGTCTGTTATCTTACAGGGGTGTGAAACTATGGATCCTAAAGCTCTAAAGCAACAATTTCCATTTTACGACGACCTCCACACCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCAAAAGACTCGAAAAGGAAAGCCATGACGGAGCGATTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAGAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGAGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGATGATGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTATGCTTTGTTGAGTAGCTTCACTTAATTAATTACCATATTAATTTTATGTTGGATGTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAAT

mRNA sequence

TATGAATTTTAAAATAAAATTCAGTTAAAATTATATATATATTTTATTGTAAGCGTGACGACATGTCGACGAAATAGATGACACATAAGAAAATCGCGTGAAAGGATAAAGACGCTATATCGCACTGCACAAAAACTCACTCAGCTTTGTACGCTTTCATACGCCGATTAATTGACGTACCAAATCGTCCTTCTCTAATCTCTCTCTCTCCGCGGGGCGATCTTTCTTTCAAAAGCGGAGATCGACGAACCGGATCTCTCTGCGATTGCGATGGAGGATTGCGATCGCCGTGCTTTTCTTCACCGACGAACGAATCGAATCGGCGTCAATGCGGAGGCGGCAGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTAGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAACAGAATGCTTTGGATTTCGGTCGCCGGTAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAATCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTCTAAAGCAACAATTTCCATTTTACGACGACCTCCACACCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCAAAAGACTCGAAAAGGAAAGCCATGACGGAGCGATTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAGAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGAGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGATGATGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTATGCTTTGTTGAGTAGCTTCACTTAATTAATTACCATATTAATTTTATGTTGGATGTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATAAT

Coding sequence (CDS)

ATGGAGGATTGCGATCGCCGTGCTTTTCTTCACCGACGAACGAATCGAATCGGCGTCAATGCGGAGGCGGCAGCGGCGGCGGATAGGTTTCCGGCGTGGAGCGTACCGGAGACGAAGGAACTGCTAGCGATAAGAGCGGCGCTGGATAGAAGGTTCTCGGAAATGAAACAGAACAGAATGCTTTGGATTTCGGTCGCCGGTAAGATGAAGGCGAAAGGCTTTAATCGGAACGACGAGCAGTGCAAGTGCAAGTGGAAAAATCTCGTCACGCGCTATAAGGGGTGTGAAACTATGGATCCTAAAGCTCTAAAGCAACAATTTCCATTTTACGACGACCTCCACACCATTTTCACCGCAAGGATGCAAAAGAATTGGTGGATCGAACCCGAAAACCGAGCAAAAGACTCGAAAAGGAAAGCCATGACGGAGCGATTGTCTAGCGAGGACCCGAAAAGGGGAAAAAGGAGGAGAGAAGAAGATGAGAGAAGCAATTTGAAGGAAATAATGAAGGGGTTTGTGGAGAGAGAGAAGGAAATGGAGAGGCAATGGAGAGAAGCGTTTAGGGTTAGAGAGGAAGAGAGAAGGTTGAAGGAGAAGGAATGGAGGATGAAAATGGAAGGTCTAGAGAGAGAGAAGATGATGACGTGGATAATGTGGAGAGAGAAAGATGATGAGAGGAGAGAGAGAGAGGAAGCAAGGGCTTTGAACACTCATGCTTTCATCTATGCTTTGTTGAGTAGCTTCACTTAA

Protein sequence

MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAFIYALLSSFT

Homology

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BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot
Match: O80450 (Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 1.4e-48
Identity = 113/255 (44.31%), Postives = 155/255 (60.78%), Query Frame = 0


Query: 21  AEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQ 80
           A   A  DRFP WSV ETKEL+ IR  LD+ F E K+N++LW  ++ KM+ K F R+ EQ
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQ 89

Query: 81  CKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPE---------- 140
           CKCKWKNLVTR+KGCETM+ +  +QQFPFYDD+  IFT RMQ+  W E E          
Sbjct: 90  CKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAA 149

Query: 141 ---NRAKDSKRKAMTERL--SSEDPK-------RGKRRREEDERSN----LKEIMKGFVE 200
                + D + + + E L   S DPK         K+R+     SN    ++E+++ F+ 
Sbjct: 150 RKREYSSDEEEENVNEELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNNGVREVLEEFMR 209

Query: 201 REKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARA 250
            +  ME +WRE +  RE+ER  KE+EWR KME LE+E++    MWR+++++RR REE RA
Sbjct: 210 HQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRA 269

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot
Match: Q9SDW0 (Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=1 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-43
Identity = 109/262 (41.60%), Postives = 150/262 (57.25%), Query Frame = 0


Query: 28  DRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKN 87
           +R P WS+ ETKELLAIR  LD+ F E K+N++LW  VA KM  KGF R+ EQCK KWKN
Sbjct: 47  ERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKN 106

Query: 88  LVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPENRAKDSKRK-------- 147
           LVTRYK CET +P A++QQFPFY+++ +IF ARMQ+  W E    +  SKRK        
Sbjct: 107 LVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDD 166

Query: 148 ----------------------------AMTERLSSEDPKRGKR-------RREEDERSN 207
                                        +T   S+   KR K+        + E   + 
Sbjct: 167 EEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNT 226

Query: 208 LKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDD 247
           LK+I++ F+ +  +ME++WR+A+ ++E ER  +EKEWR +M  LE E+  T   W E+++
Sbjct: 227 LKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREE 286

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot
Match: Q9LU92 (Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 0


Query: 25  AAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCK 84
           A   R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  K
Sbjct: 47  APKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDK 106

Query: 85  WKNLVTRYKGCETMDPKAL---KQQFPFYDDLHTIFTARMQK 124
           W+N++  +K  +  + KA      +  +Y+++  IF  R +K
Sbjct: 107 WRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKK 148

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot
Match: Q9FX53 (Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.8e-10
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 18  GVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRN 77
           G + E  A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+
Sbjct: 72  GEDHEVKAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRS 131

Query: 78  DEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQK 124
              C  KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 132 PTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot
Match: B2KFW1 (Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus OX=10090 GN=Zscan20 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 1.8e-06
Identity = 29/90 (32.22%), Postives = 47/90 (52.22%), Query Frame = 0


Query: 33  WSVPETKELLAI--RAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVT 92
           W   ETK  LAI   +    +     QNR ++ ++A +++A+GF R  EQC+ + KNL+ 
Sbjct: 318 WGYEETKTFLAILSESPFSEKLQTCHQNRQVYRAIAERLRARGFLRTLEQCRYRVKNLLR 377

Query: 93  RYKGCETMDPKALKQQFPFYDDLHTIFTAR 121
            Y+  +   P       PFY++L  +  AR
Sbjct: 378 NYRKAKNSHPPG---TCPFYEELEALVRAR 404

[Close]

BLAST of Cp4.1LG10g07940 vs. NCBI nr
Match: XP_023544953.1 (trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 491 bits (1263), Expect = 8.26e-175
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60
           MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM
Sbjct: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60

Query: 61  LWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTAR 120
           LWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTAR
Sbjct: 61  LWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTAR 120

Query: 121 MQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180
           MQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME
Sbjct: 121 MQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180

Query: 181 RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAF 240
           RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAF
Sbjct: 181 RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAF 240

Query: 241 IYALLSSFT 249
           IYALLSSFT
Sbjct: 241 IYALLSSFT 249

[Close]

BLAST of Cp4.1LG10g07940 vs. NCBI nr
Match: KAG6603581.1 (Trihelix transcription factor GT-3b, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 472 bits (1214), Expect = 2.44e-167
Identity = 240/249 (96.39%), Postives = 242/249 (97.19%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60
           ME+CDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60

Query: 61  LWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTAR 120
           LWIS+AGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQQFPFYDDLH IFTAR
Sbjct: 61  LWISIAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTAR 120

Query: 121 MQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180
           MQKNWWIEPENRAKDSKRKA  ERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME
Sbjct: 121 MQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180

Query: 181 RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHAF 240
           RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKD ERREREEARALNTHAF
Sbjct: 181 RQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDAERREREEARALNTHAF 240

Query: 241 IYALLSSFT 249
           I ALL SFT
Sbjct: 241 ISALLRSFT 249

[Close]

BLAST of Cp4.1LG10g07940 vs. NCBI nr
Match: XP_022950464.1 (trihelix transcription factor GT-3b-like [Cucurbita moschata])

HSP 1 Score: 466 bits (1198), Expect = 6.95e-165
Identity = 240/250 (96.00%), Postives = 241/250 (96.40%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEA-AAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNR 60
           ME+CDRRAFLHRRTNRIGVNAEA AAAADRFPAWSVPETKELLAIR ALDRRFSEMKQNR
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAEAAAADRFPAWSVPETKELLAIREALDRRFSEMKQNR 60

Query: 61  MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTA 120
           MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQQFPFYDDLH IFTA
Sbjct: 61  MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTA 120

Query: 121 RMQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM 180
           RMQKNWWIEPENRAKDSKRKA  ERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM
Sbjct: 121 RMQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM 180

Query: 181 ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHA 240
           ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKD ERREREEARALNTHA
Sbjct: 181 ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDAERREREEARALNTHA 240

Query: 241 FIYALLSSFT 249
           FI ALL SFT
Sbjct: 241 FISALLRSFT 250

[Close]

BLAST of Cp4.1LG10g07940 vs. NCBI nr
Match: XP_022978267.1 (trihelix transcription factor GT-3b-like [Cucurbita maxima])

HSP 1 Score: 457 bits (1175), Expect = 2.87e-161
Identity = 239/257 (93.00%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAA---DRFPAWSVPETKELLAIRAALDRRFSEMKQ 60
           ME+CDRRAFLHRRTNRIGVNAEAAAAA   DRFPAWSVPETKELLAIRAALDRRFSEMKQ
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAAAAAAAEDRFPAWSVPETKELLAIRAALDRRFSEMKQ 60

Query: 61  NRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIF 120
           NRMLWISVAG MKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQ FPFYDDLHTIF
Sbjct: 61  NRMLWISVAGNMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKARKQPFPFYDDLHTIF 120

Query: 121 TARMQKNWWIEPENRAKDSKRKAMTERLSSED-----PKRGKRRREEDERSNLKEIMKGF 180
           TARMQKNWWIEP+NRAKDSKRKA TERLSSED      KRGKRRREEDERSNLKEIMKGF
Sbjct: 121 TARMQKNWWIEPKNRAKDSKRKATTERLSSEDMNEEEAKRGKRRREEDERSNLKEIMKGF 180

Query: 181 VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEA 240
           VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREK+DERREREEA
Sbjct: 181 VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKEDERREREEA 240

Query: 241 RALNTHAFIYALLSSFT 249
           RALNTHAFI ALL SFT
Sbjct: 241 RALNTHAFISALLRSFT 257

[Close]

BLAST of Cp4.1LG10g07940 vs. NCBI nr
Match: KAG7033768.1 (Trihelix transcription factor GT-3b, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 367 bits (942), Expect = 7.71e-127
Identity = 182/188 (96.81%), Postives = 184/188 (97.87%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60
           ME+CDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRM 60

Query: 61  LWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTAR 120
           LWIS+AGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQQFPFYDDLH IFTAR
Sbjct: 61  LWISIAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTAR 120

Query: 121 MQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180
           MQKNWWIEPENRAKDSKRKA  ERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME
Sbjct: 121 MQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEME 180

Query: 181 RQWREAFR 188
           RQWREAFR
Sbjct: 181 RQWREAFR 188

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL
Match: A0A6J1GFW6 (trihelix transcription factor GT-3b-like OS=Cucurbita moschata OX=3662 GN=LOC111453559 PE=4 SV=1)

HSP 1 Score: 466 bits (1198), Expect = 3.36e-165
Identity = 240/250 (96.00%), Postives = 241/250 (96.40%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEA-AAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNR 60
           ME+CDRRAFLHRRTNRIGVNAEA AAAADRFPAWSVPETKELLAIR ALDRRFSEMKQNR
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAEAAAADRFPAWSVPETKELLAIREALDRRFSEMKQNR 60

Query: 61  MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTA 120
           MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQQFPFYDDLH IFTA
Sbjct: 61  MLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKAFKQQFPFYDDLHAIFTA 120

Query: 121 RMQKNWWIEPENRAKDSKRKAMTERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM 180
           RMQKNWWIEPENRAKDSKRKA  ERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM
Sbjct: 121 RMQKNWWIEPENRAKDSKRKATIERLSSEDPKRGKRRREEDERSNLKEIMKGFVEREKEM 180

Query: 181 ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARALNTHA 240
           ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKD ERREREEARALNTHA
Sbjct: 181 ERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDAERREREEARALNTHA 240

Query: 241 FIYALLSSFT 249
           FI ALL SFT
Sbjct: 241 FISALLRSFT 250

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL
Match: A0A6J1IKN6 (trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC111478302 PE=4 SV=1)

HSP 1 Score: 457 bits (1175), Expect = 1.39e-161
Identity = 239/257 (93.00%), Postives = 242/257 (94.16%), Query Frame = 0


Query: 1   MEDCDRRAFLHRRTNRIGVNAEAAAAA---DRFPAWSVPETKELLAIRAALDRRFSEMKQ 60
           ME+CDRRAFLHRRTNRIGVNAEAAAAA   DRFPAWSVPETKELLAIRAALDRRFSEMKQ
Sbjct: 1   MENCDRRAFLHRRTNRIGVNAEAAAAAAAEDRFPAWSVPETKELLAIRAALDRRFSEMKQ 60

Query: 61  NRMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIF 120
           NRMLWISVAG MKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKA KQ FPFYDDLHTIF
Sbjct: 61  NRMLWISVAGNMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKARKQPFPFYDDLHTIF 120

Query: 121 TARMQKNWWIEPENRAKDSKRKAMTERLSSED-----PKRGKRRREEDERSNLKEIMKGF 180
           TARMQKNWWIEP+NRAKDSKRKA TERLSSED      KRGKRRREEDERSNLKEIMKGF
Sbjct: 121 TARMQKNWWIEPKNRAKDSKRKATTERLSSEDMNEEEAKRGKRRREEDERSNLKEIMKGF 180

Query: 181 VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEA 240
           VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREK+DERREREEA
Sbjct: 181 VEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKEDERREREEA 240

Query: 241 RALNTHAFIYALLSSFT 249
           RALNTHAFI ALL SFT
Sbjct: 241 RALNTHAFISALLRSFT 257

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL
Match: A0A0A0KZY4 (Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE=4 SV=1)

HSP 1 Score: 335 bits (859), Expect = 1.96e-113
Identity = 187/265 (70.57%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 1   MED-CD-RRAFLHRRTNRIGVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQN 60
           MED CD RRA  H    RIGVNAEAA   DRFP WSV ETKELLAIRAALD+ FSEMKQN
Sbjct: 1   MEDFCDLRRAVFH----RIGVNAEAAG--DRFPPWSVLETKELLAIRAALDKNFSEMKQN 60

Query: 61  RMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFT 120
           RMLWISVA KMKAKGFNR+DEQCKCKWKNLVTRYKGCETMDPKALK QFPFYDDLHTIFT
Sbjct: 61  RMLWISVAEKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFT 120

Query: 121 ARMQKNWWIEPENRAKDSKRKA--------------MTERLSSEDPKRGKRRREEDERSN 180
           ARMQKNWW+E ENR+  SKRK                T+  +    ++ KR   E+   N
Sbjct: 121 ARMQKNWWVEAENRSGGSKRKPNEDPNGDRELENEEKTKTKNGTKKRKWKRDNPEEHERN 180

Query: 181 LKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDD 240
           LKEI+K FV+RE EMER+WREAFRVREEERRLKE+EWRMKMEG+EREKMM  I+WRE +D
Sbjct: 181 LKEILKDFVKREMEMEREWREAFRVREEERRLKEEEWRMKMEGIEREKMMMEILWRESED 240

Query: 241 ERREREEARALNTHAFIYALLSSFT 249
           +RREREEARA  T A I ALL++ T
Sbjct: 241 KRREREEARAQKTDALISALLTNLT 259

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL
Match: A0A5D3DZE6 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1212G00080 PE=4 SV=1)

HSP 1 Score: 326 bits (835), Expect = 1.00e-109
Identity = 185/266 (69.55%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 1   MED-CDRRAFLHRRTNRI-GVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQN 60
           MED CD R  +  R +RI GVNA+ AA  DRFP WSV ETKELLAIRAALD+ FSEMKQN
Sbjct: 1   MEDFCDLRRAV--RLHRIAGVNADQAAG-DRFPPWSVLETKELLAIRAALDKNFSEMKQN 60

Query: 61  RMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFT 120
           RMLWISVAGKMKAKGFNR+DEQCKCKWKNLVTRYKGCETMDPKALK QFPFYDDLHTIFT
Sbjct: 61  RMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFT 120

Query: 121 ARMQKNWWIEPENRAKDSKRKAMTE-----RLSSEDP-------KRGKRRRE---EDERS 180
           ARMQKNWW+E ENR+   KRKA  +      L +E+        K+ K +R+   ED   
Sbjct: 121 ARMQKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEDHER 180

Query: 181 NLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKD 240
           NL+EI+KGF++RE EMER+WREAFRVREEERRLKE+EWRMKMEG+EREKM   I+WRE +
Sbjct: 181 NLEEILKGFLKREMEMEREWREAFRVREEERRLKEEEWRMKMEGIEREKMTMEILWRENE 240

Query: 241 DERREREEARALNTHAFIYALLSSFT 249
           ++RREREEARA  T A I ALL++ T
Sbjct: 241 EKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL
Match: A0A5A7UVF8 (Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold612G00040 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 4.06e-109
Identity = 184/266 (69.17%), Postives = 211/266 (79.32%), Query Frame = 0


Query: 1   MED-CDRRAFLHRRTNRI-GVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQN 60
           MED CD R  +  R +RI GVNA+ AA  DRFP WSV ETKELLAIRAALD+ FSEMKQN
Sbjct: 1   MEDFCDLRRAV--RLHRIAGVNADQAAG-DRFPPWSVLETKELLAIRAALDKNFSEMKQN 60

Query: 61  RMLWISVAGKMKAKGFNRNDEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFT 120
           RMLWISVAGKMKAKGFNR+DEQCKCKWKNLVTRYKGCETMDPKALK QFPFYDDLHTIFT
Sbjct: 61  RMLWISVAGKMKAKGFNRSDEQCKCKWKNLVTRYKGCETMDPKALKHQFPFYDDLHTIFT 120

Query: 121 ARMQKNWWIEPENRAKDSKRKAMTE-----RLSSEDP-------KRGKRRRE---EDERS 180
           ARMQKNWW+E ENR+   KRKA  +      L +E+        K+ K +R+   E+   
Sbjct: 121 ARMQKNWWVEAENRSGVLKRKANEDPNGDRELENEEKTKTKNVTKKRKWKRDNDLEEHER 180

Query: 181 NLKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKD 240
           NL+EI+KGF++RE EMER+WREAFRVREEERRLKE+EWRMKMEG+EREKM   I+WRE +
Sbjct: 181 NLEEILKGFLKREMEMEREWREAFRVREEERRLKEEEWRMKMEGIEREKMTMEILWRENE 240

Query: 241 DERREREEARALNTHAFIYALLSSFT 249
           ++RREREEARA  T A I ALL++ T
Sbjct: 241 EKRREREEARAQKTDALISALLTNLT 263

[Close]

BLAST of Cp4.1LG10g07940 vs. TAIR 10
Match: AT2G38250.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 194.5 bits (493), Expect = 1.0e-49
Identity = 113/255 (44.31%), Postives = 155/255 (60.78%), Query Frame = 0


Query: 21  AEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQ 80
           A   A  DRFP WSV ETKEL+ IR  LD+ F E K+N++LW  ++ KM+ K F R+ EQ
Sbjct: 30  ASPVAVGDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQ 89

Query: 81  CKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPE---------- 140
           CKCKWKNLVTR+KGCETM+ +  +QQFPFYDD+  IFT RMQ+  W E E          
Sbjct: 90  CKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRMLWAESEGGGGGTSGAA 149

Query: 141 ---NRAKDSKRKAMTERL--SSEDPK-------RGKRRREEDERSN----LKEIMKGFVE 200
                + D + + + E L   S DPK         K+R+     SN    ++E+++ F+ 
Sbjct: 150 RKREYSSDEEEENVNEELVDVSNDPKILNPKKNIAKKRKGGSNSSNSNNGVREVLEEFMR 209

Query: 201 REKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDDERREREEARA 250
            +  ME +WRE +  RE+ER  KE+EWR KME LE+E++    MWR+++++RR REE RA
Sbjct: 210 HQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREEMRA 269

[Close]

BLAST of Cp4.1LG10g07940 vs. TAIR 10
Match: AT5G01380.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 1.7e-44
Identity = 109/262 (41.60%), Postives = 150/262 (57.25%), Query Frame = 0


Query: 28  DRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCKWKN 87
           +R P WS+ ETKELLAIR  LD+ F E K+N++LW  VA KM  KGF R+ EQCK KWKN
Sbjct: 47  ERIPQWSIEETKELLAIREELDQTFMETKRNKLLWEVVAAKMADKGFVRSAEQCKSKWKN 106

Query: 88  LVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQKNWWIEPENRAKDSKRK-------- 147
           LVTRYK CET +P A++QQFPFY+++ +IF ARMQ+  W E    +  SKRK        
Sbjct: 107 LVTRYKACETTEPDAIRQQFPFYNEIQSIFEARMQRMLWSEATEPSTSSKRKHHQFSSDD 166

Query: 148 ----------------------------AMTERLSSEDPKRGKR-------RREEDERSN 207
                                        +T   S+   KR K+        + E   + 
Sbjct: 167 EEEEVDEPNQDINEELLSLVETQKRETEVITTSTSTNPRKRAKKGKGVASGTKAETAGNT 226

Query: 208 LKEIMKGFVEREKEMERQWREAFRVREEERRLKEKEWRMKMEGLEREKMMTWIMWREKDD 247
           LK+I++ F+ +  +ME++WR+A+ ++E ER  +EKEWR +M  LE E+  T   W E+++
Sbjct: 227 LKDILEEFMRQTVKMEKEWRDAWEMKEIEREKREKEWRRRMAELEEERAATERRWMEREE 286

[Close]

BLAST of Cp4.1LG10g07940 vs. TAIR 10
Match: AT3G25990.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.1e-11
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 0


Query: 25  AAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRNDEQCKCK 84
           A   R   W+  ET+ L+++R  +D  F+  K N+ LW  ++ KM+ KGF+R+   C  K
Sbjct: 47  APKKRAETWAQDETRTLISLRREMDNLFNTSKSNKHLWEQISKKMREKGFDRSPSMCTDK 106

Query: 85  WKNLVTRYKGCETMDPKAL---KQQFPFYDDLHTIFTARMQK 124
           W+N++  +K  +  + KA      +  +Y+++  IF  R +K
Sbjct: 107 WRNILKEFKKAKQHEDKATSGGSTKMSYYNEIEDIFRERKKK 148

[Close]

BLAST of Cp4.1LG10g07940 vs. TAIR 10
Match: AT1G13450.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.1e-11
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 18  GVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRN 77
           G + E  A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+
Sbjct: 72  GEDHEVKAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRS 131

Query: 78  DEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQK 124
              C  KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 132 PTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

[Close]

BLAST of Cp4.1LG10g07940 vs. TAIR 10
Match: AT1G13450.2 (Homeodomain-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 4.1e-11
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 18  GVNAEAAAAADRFPAWSVPETKELLAIRAALDRRFSEMKQNRMLWISVAGKMKAKGFNRN 77
           G + E  A   R   W   ET+ L+  R  +D  F+  K N+ LW  ++ KM+ KGF+R+
Sbjct: 72  GEDHEVKAPKKRAETWVQDETRSLIMFRRGMDGLFNTSKSNKHLWEQISSKMREKGFDRS 131

Query: 78  DEQCKCKWKNLVTRYKGCETMDPKALKQQFPFYDDLHTIFTARMQK 124
              C  KW+NL+  +K  +  D      +  +Y ++  I   R +K
Sbjct: 132 PTMCTDKWRNLLKEFKKAKHHDRGNGSAKMSYYKEIEDILRERSKK 177

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g07940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80450	1.4e-48	44.31	Trihelix transcription factor GT-3b OS=Arabidopsis thaliana OX=3702 GN=GT-3B PE=...	[more]
Q9SDW0	2.3e-43	41.60	Trihelix transcription factor GT-3a OS=Arabidopsis thaliana OX=3702 GN=GT-3A PE=...	[more]
Q9LU92	1.5e-10	30.39	Trihelix transcription factor GT-4 OS=Arabidopsis thaliana OX=3702 GN=GT-4 PE=2 ...	[more]
Q9FX53	5.8e-10	30.19	Trihelix transcription factor GT-1 OS=Arabidopsis thaliana OX=3702 GN=GT-1 PE=1 ...	[more]
B2KFW1	1.8e-06	32.22	Zinc finger and SCAN domain-containing protein 20 OS=Mus musculus OX=10090 GN=Zs...	[more]

BLAST of Cp4.1LG10g07940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544953.1	8.26e-175	100.00	trihelix transcription factor GT-3b-like [Cucurbita pepo subsp. pepo]	[more]
KAG6603581.1	2.44e-167	96.39	Trihelix transcription factor GT-3b, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022950464.1	6.95e-165	96.00	trihelix transcription factor GT-3b-like [Cucurbita moschata]	[more]
XP_022978267.1	2.87e-161	93.00	trihelix transcription factor GT-3b-like [Cucurbita maxima]	[more]
KAG7033768.1	7.71e-127	96.81	Trihelix transcription factor GT-3b, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Cp4.1LG10g07940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GFW6	3.36e-165	96.00	trihelix transcription factor GT-3b-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IKN6	1.39e-161	93.00	trihelix transcription factor GT-3b-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A0A0KZY4	1.96e-113	70.57	Myb-like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G310210 PE...	[more]
A0A5D3DZE6	1.00e-109	69.55	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7UVF8	4.06e-109	69.17	Trihelix transcription factor GT-3b isoform X2 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Cp4.1LG10g07940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38250.1	1.0e-49	44.31	Homeodomain-like superfamily protein	[more]
AT5G01380.1	1.7e-44	41.60	Homeodomain-like superfamily protein	[more]
AT3G25990.1	1.1e-11	30.39	Homeodomain-like superfamily protein	[more]
AT1G13450.1	4.1e-11	30.19	Homeodomain-like superfamily protein	[more]
AT1G13450.2	4.1e-11	30.19	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.10.60		coord: 33..94 e-value: 2.1E-17 score: 64.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..162
None	No IPR available	PANTHER	PTHR21654:SF93	SUBFAMILY NOT NAMED	coord: 9..162 coord: 162..248
None	No IPR available	PANTHER	PTHR21654	FAMILY NOT NAMED	coord: 9..162 coord: 162..248
None	No IPR available	CDD	cd12203	GT1	coord: 33..96 e-value: 1.63866E-16 score: 69.6163
IPR044822	Myb/SANT-like DNA-binding domain 4	PFAM	PF13837	Myb_DNA-bind_4	coord: 32..115 e-value: 8.7E-18 score: 64.5
IPR001005	SANT/Myb domain	PROSITE	PS50090	MYB_LIKE	coord: 33..89 score: 7.061747

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g07940.1	Cp4.1LG10g07940.1	mRNA