Cp4.1LG10g07270 (gene) Cucurbita pepo (MU‐CU‐16) v4.1

Overview


Name	Cp4.1LG10g07270
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (MU‐CU‐16) v4.1)
Description	KH domain-containing protein
Location	Cp4.1LG10: 5849538 .. 5856353 (-)
RNA-Seq Expression	Cp4.1LG10g07270
Synteny	Cp4.1LG10g07270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGACGACAATTTACAATCATAGATTTTCCTCATTTCAGCTTCCGTATATTTACAGGCGTCCACCCTTTTACTCCTGACCTCTGCCTCCGCCTCCCTCGTCGGAACTGTTCTTATCCACCGTCTTCTCCGGCGACATCGCCGTCTCATTCTTCCGACATCCCTCTTCCATTTCCCAATCCTCCGATTCTCAGAACATCCATTTCTGCTCACAGTTCAATAGCAAAAGGCCATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGGTACCACCTCGGATAATCCACTTCCGAGAATTTTCCTTCTGTTTAATTTAACGATTCTAGAGTTTGCTCAGCTTGTTAAAGCTGAGATTACTAATTGAATAATCAATCCCCCCTTTGGTTCTTTGTTTTTTAATCTTTAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGGTAGTGCTCTTCTCTGAATTTTTGGTGTTCCTGAATTTATTTCAGTGCTTAATTGTTGCGGCGGTGTTTATGTGTATGTCTAGATCGGTGAAGCTGGTGAACTTCTCCTTTTCTTCTTTACTATCATTAGCGATTGCTCTCTTTGCCCTCGGGGTTGACTGTTGAATTGTGCATATGTTAGTCTTGGATAATCTATTTCACTTTATTGAATCTGGTTTTGTGGAGTTCTGCTCTTTTGAGTGCTGGGAAAATCTTAGCTACTCTTGTTGGGTGCTTAATTCTTCTAGTACACATCCATTCTGTTAGATTTTTCTTCTTAAGTTTTGGAGAGTTATGCATTCTTTATACTAATATCTTGTACAAAAGTCTCTTCTGATGTATCACTGTCATGAACTAATATACCATTGAAAGACCAAAAGCCTCGTACATACATTAAGCTTCGAAAAGCGATTTTCAAGCTTTTTGTGTTATAAGAATTGAAGGTTTAAGTCATTAAGTTTGGTTTAGAATGTTATTAGATATTCATTAGTTCTTGTTATGTCAATACGGGGGTATATGATTGTTCACTGAAATCATGTCTACATTTGTTAAAGCTAAAATACCTCGAAGTATATTATAGGAAATGTGTCTAGTTGTTAATTCTTCCTACCCATATTATACGCTGTCAACGATTTCCAAACACTTTCTAAAATTTTCTCTATATCACATTTTTCTAAATTTTTTTTTATGAGAAATGAGACTAGATGACCCAAGTTCTAGTGGGCTGACTCTCGAGGGTGAGAATAAGTGATGCACAATTACGTTGCGAGTCCTGACCTTTCATTTAACATTTTAACGATTTTTCTACTCTAAAAGTAATTTTGAGTTATTTACAAAAACGTGTAATTTTGAAAAAATAAAGATTATTTTTGAAATAGGGAGTAATTATTTATAATTTGAAAATATTGTAAAGAATGAAACAAGTGGACTTCGTCTTCAAATCTTAGCTGTATCATGAAGTGGTGGTTCCATTTGGACCCAATATTTAATCTATTCATCAGTAGCGGAGGTTTGAATTCATCCAAATTGGTGATGCGGCAATCTCATGCTGACAATCTGTTCTTTTTTGGTCATTCACTATACCTTAGTCTTTGACATAAGAACTGGAGGCTGGATGTTGAATGTGGAAAAGCCTTTCAAGTGAAGGTTAATCATTTAAGGCCCCGAAATATGTAGTAGTTTTAGAAATCAATGTGCGAATAAAAAAAATGGTGCTAGTATTAGTTCTTGTGTAAGAGCTTCCTCGATCAGGATCTATTCTTTAGGTTGTACCTCTTGCATTTTTGAGTTCTAAGTCTAGTGCTGTTCGAACTTACGGAGTTGTCCTTGGATTCTTTGGCGTTTGATAGTCACGTAATGCTCCAAGGCTCAAGTTTCGACCTCCATTTAAATTGCCATATTGGATGTTGATGAACTTCATCCTGCTCTGAGCAGCATAGTATTTATTTGCACTTCCTAATTGATCTTGTTATAGAGTTCGGTTTTGTTTATAAGTATTCTTCTCTGTACTTAATGCACAAATATATTTCTATGTCTTCCTTTTGGTATGTTTCTGCTTTTCAATTCTGTCGGTAACTTCTAACAGCAAGCTCTTTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAATTACTATTTTAGCATCAAAACTCCATTGGTACTCCTGATACCTGTTGATCTCATCATTTTGAGTACAATTTTAGTATGTTTTGATATATAGGCTAACATATGCCATCATTGTTACCCGATAGTTTGAAGGTAACATTGTAATTCTCCCTCTAAAGTAGGCTCATAGCTTGAGGGATTGGGGCTGCAACAAATGTTGCAGTGTGCCATTATTTATAGCTAATTACAAAAGTTTGTTCGTTGTTTTATTTAATATGAATTTTGGGAATATATGCAGCGAGAGAAGGAGCGGACTTGAATTTGTCTTTAACTCGGTATTTGTTCTTGAGTTGAACACGTCTCATGAAATTGATAGTTTCTTTTCCATTTGTTAATCTTCTTATTTTTGTGTGTTTGTTCGTTTGTTCGTTCTCAATAAGATCGTAATAAGTCTAATTAATTTGCTTACTAAGATCTAATTTACTCTCATAGATGAGAAAAAACGTGAAACTTATTATTTTTTTCGGTATGAAACTGTGCTTTCATTGAAAGAACTAAATCTACCAGGGAATACATACAAACAAACAAACAAAAAAAGAAAAAAAAGAGAGAGAATTACAAAAAGTGAAACTTGCCTATTGTAACAACCCAAGCCCACCGCTAGCAAATGTTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGATTTCCGCACCCTTATAAAGGATGCTTCGTTCTCTTCTTCAACCGATGTGGGATCTCACGCCTATGTTAGGAGCTAATAGCCGTGAGTACTTTTCTAGCATGTAAACTTCCAATCTTGAAAATCATACTCCAATGACTTAAAAATAAAAGAAGTGTGAAGAGGATTTCTTTGGCTCCATGTTTAGGCTTGTGATAATGAATATATTTGGCTCCATGTTTAGGCTTGTGATAATGAATATATTTCACTATTTTTCTACTTTCTCGTTTGAGTGGCCAAAAAATTCTTCGCCATTCTTGAGGATTGCCTTGCACGGGTTACGCTTATTGGTTCTCCACTATAAAACTCAACTGAAAGCATCATCTATAAGACCAAAGAAGAAGAAGAAGAAGAAAGAAAAAAAGAATTAGTAACAAATCTGGATAATCCCAATGTTTCTAGCAAAAGTTGGCCTCTTGATGTAACATTATTCGAAGTTATTACAAGAACTATTGAANAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGGTAATTACTATTTTAGCATCAAAACTCCATTGGTACTCCTGATACCTGTTGATCTCATCATTTTGAGTACAATTTTAGTATGTTTTGATATATAGGCTAACATATGCCATCATTGTTACCCGATAGTTTGAAGGTAACATTGTAATTCTCCCTCTAAAGTAGGCTCATAGCTTGAGGGATTGGGGCTGCAACAAATGTTGCAGTGTGCCATTATTTATAGCTAATTACAAAAGTTTGTTCGTTGTTTTATTTAATATGAATTTTGGGAATATATGCAGCGAGAGAAGGAGCGGACTTGAATTTGTCTTTAACTCGGTATTTGTTCTTGAGTTGAACACGTCTCATGAAATTGATAGTTTCTTTTCCATTTGTTAATCTTCTTATTTTTGTGTGTTTGTTCGTTTGTTCGTTCTCAATAAGATCGTAATAAGTCTAATTAATTTGCTTACTAAGATCTAATTTACTCTCATAGATGAGAAAAAACGTGAAACTTATTATTTTTTTCGGTATGAAACTGTGCTTTCATTGAAAGAACTAAATCTACCAGGGAATACATACAAACAAACAAACAAAAAAAGAAAAAAAAGAGAGAGAATTACAAAAAGTGAAACTTGCCTATTGTAACAACCCAAGCCCACCGCTAGCAAATGTTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGATTTCCGCACCCTTATAAAGGATGCTTCGTTCTCTTCTTCAACCGATGTGGGATCTCACGCCTATGTTAGGAGCTAATAGCCGTGAGTACTTTTCTAGCATGTAAACTTCCAATCTTGAAAATCATACTCCAATGACTTAAAAATAAAAGAAGTGTGAAGAGGATTTCTTTGGCTCCATGTTTAGGCTTGTGATAATGAATATATTTGGCTCCATGTTTAGGCTTGTGATAATGAATATATTTCACTATTTTTCTACTTTCTCGTTTGAGTGGCCAAAAAATTCTTCGCCATTCTTGAGGATTGCCTTGCACGGGTTACGCTTATTGGTTCTCCACTATAAAACTCAACTGAAAGCATCATCTATAAGACCAAAGAAGAAGAAGAAGAAGAAAGAAAAAAAGAATTAGTAACAAATCTGGATAATCCCAATGTTTCTAGCAAAAGTTGGCCTCTTGATGTAACATTATTCGAAGTTATTACAAGAACTATTGAAGAATGTTTCAAATATATAGATGGCATTATGATAATGTTTTTCCAGGCTACTTTTTTCTGTTGCAGTTCTTTCATCTTCATTTTGGACCCCATGATTGATTATTTGATCGTTGCATACTGATATCTCCTGCACTTCCAGTCCTCATATCCTGTTATATTCATATAGAATTAAATTCTTTCTATGTTAATTAGTCTTCAGGATGGTTTTGTTTTAAAAAAGTTGTATTAATATGGTAGAACCTTTTGAAACATACAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATGTATGTTCTGTCGAAGTACAGATGTTTTTTGTTTGCTGGTCATACGCTAGCCGGTTTGTACGACCTGTACGTACACAAACCTATATATTAATACTTGAAGTTTCTGCTCTTTGTGGATGTCAGTTCAATTTTGTAGGGCGGCTTTTGGGTCCTCGGGGCAACTCGTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGCTCGGTAAAGGATCCAGACAAGGTACTATAAGGGTATCTCTAATTTGGAATCAATGTATCATATGATGGATCTCTCAAGAATCAAGACTATTGTAGTGATATTTTGCTTCTCTCATTGGATTGTTATCATTCTGTTAAGCAGTAGTATTGGTTATAAATTGTATTCGTACTTAATTTGTTTAACTTTTACATTGTCAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCTAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGTATATTTTCTTACCTTGGTTACGTTTTTCGAGCGATTTTGGCTGGCCAAAGTCACTCTTTTCATGCTCAAAAGTACTTCCCACTAAAATCATCATGTTGTGGAAGAAATTTATAAGCATACACCTTTATATTTATTTTACTCGAAGCCTTGTTCTATTACTCATTTACTTGTTTATGAAACTAAAGCTGCTTTCAAGAACCTTTCTTGAATCAATGGGCCAAGTTATCATTCTTACCCATGTTAATCATCAACCCCTCATGGATTTTTTGCATTGCTCATCCTTTGATGCAATCGATTCAGATTTTTCTTTTTTCTTTTCCCCGAACACGCTGTGTTCTAACAGACTTCTGATTCTTCTGGCATATGAATCATCAACTTGCAGGATGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAACGTGCCAAAACAGGTCGTTAAGTGCTCATATCCTTTCTTACCTTAAAGAATTTCTACCCCAGTCCAGAATTCAGTCACTTGTATAACTCGATGTGAATCTGACCGACCGTGTGACGTAGCTAGGAGTAAGGGGAGGCGTAACTTCAGTTCCAGGTGAGCCTTCTCTCTGTGTTCCTTTAATATTCTTGACAGAAAGACTGGAAAAAGTTAAAAAAAAAAGAGTGAAAAGGAAAAAAAAAAAAACAATAGGGGATGGATTATATGTTGAGTGTAGGTTTGAATAGGTCAGTTATTCCAACAAAGTTAGTATATTCATTGGATTTATTCTTGTGTTAGGGACTGCTGAGGAGTGTGTAGTTTTACATTATTAATGCAAAAACATTAGGAAGTGATGAATGTAATATTGTTTGATATTTCTTAGGTGTTGTAATGTAAGCAATGTCAGTGTCAATTATATTTTTGGAATGATATATGAAAGAACAGTGCAAAAACTCAATCAATGTGCTGCTCAGTTTGTGTTTGCTATCAAGTTTCAGAATATGATTCTCCTCT

mRNA sequence

CGACGACAATTTACAATCATAGATTTTCCTCATTTCAGCTTCCGTATATTTACAGGCGTCCACCCTTTTACTCCTGACCTCTGCCTCCGCCTCCCTCGTCGGAACTGTTCTTATCCACCGTCTTCTCCGGCGACATCGCCGTCTCATTCTTCCGACATCCCTCTTCCATTTCCCAATCCTCCGATTCTCAGAACATCCATTTCTGCTCACAGTTCAATAGCAAAAGGCCATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGCAAGCTCTTTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGTCCTCGGGGCAACTCGTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGCTCGGTAAAGGATCCAGACAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCTAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGATGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAACGTGCCAAAACAGGTCGTTAAGTGCTCATATCCTTTCTTACCTTAAAGAATTTCTACCCCAGTCCAGAATTCAGTCACTTGTATAACTCGATGTGAATCTGACCGACCGTGTGACGTAGCTAGGAGTAAGGGGAGGCGTAACTTCAGTTCCAGGTGAGCCTTCTCTCTGTGTTCCTTTAATATTCTTGACAGAAAGACTGGAAAAAGTTAAAAAAAAAAGAGTGAAAAGGAAAAAAAAAAAAACAATAGGGGATGGATTATATGTTGAGTGTAGGTTTGAATAGGTCAGTTATTCCAACAAAGTTAGTATATTCATTGGATTTATTCTTGTGTTAGGGACTGCTGAGGAGTGTGTAGTTTTACATTATTAATGCAAAAACATTAGGAAGTGATGAATGTAATATTGTTTGATATTTCTTAGGTGTTGTAATGTAAGCAATGTCAGTGTCAATTATATTTTTGGTGCTGCTCAGTTTGTGTTTGCTATCAAGTTTCAGAATATGATTCTCCTCT

Coding sequence (CDS)

ATGTCCGGTATGTACGGTACCAACTTCTCCCCTGCAAGAACTGCTTCGCCTCACATCAGGACTACTCCTGATGGAGACAGTCAGTACTTGTCGGAGCTACTAGCGGAGCATCAGAAGTTCGGCCCCTTCATGCAAGTTCTTCCGATCTGTAGCCGACTTTTGAATCAAGCAAGCTCTTTAAATGCAGAAATATTGCGGGTTTCTGGAATGATGTCCAACCAGGGTTTCTGTGACCTCGATAGGCTTCGGCATAGAAGTCCTAGTCCAATGGCTTCTTCAAACCTTATATCTAATGTTAGTACCACAGGTTTGAGTGGCTGGAATGGTCTTCCTCAGGAGCAGAGATTAAGTAGAGCCACCGGAATGACAATGGACTGGCAAAGTGCACCTGCGAGTCCTAGTTCGCTCACCGTGAAGAGAATTCTACGTTTGGAAATACCTGTGGATACTTACCCCAATTTCAATTTTGTAGGGCGGCTTTTGGGTCCTCGGGGCAACTCGTTGAAACGTGTGGAAGTTACTACAGGTTGTCGTGTATACATTCGAGGGAAAGGCTCGGTAAAGGATCCAGACAAGGAAGAGAAGTTACGGGGACGACCCGGCTACGAGCACTTGAACGAACCACTGCACATCTTGATTGAGGCAGATTTACCAGCTAATATTGTTGATATAAGGCTCAGACAGGCACAAGAAATTATTGAAGAACTGCTCAAACCCGTGGATGAGAGCCAAGATTACATAAAAAGGCAGCAGCTACGCGAACTCGCTATGCTAAATTCAAGTTTCAGAGAAGACAGTCCAGGACCTGGTGGTAGCGTCTCTCCATTCAACTCAAGCGGAATGAAACGTGCCAAAACAGGTCGTTAA

Protein sequence

MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR

Homology

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot
Match: Q8GYR4 (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.2e-123
Identity = 227/290 (78.28%), Postives = 250/290 (86.21%), Query Frame = 0


Query: 1   MSGMYG-TNFSPARTASPHIRT-TPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQAS 60
           MSG+Y   NFSP+R ASP IRT + D DSQY+S+LLAEHQK GPFMQVLPICSRLLNQ  
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQ-- 60

Query: 61  SLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSR 120
               EI R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+  
Sbjct: 61  ----EIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGG 120

Query: 121 ATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCR 180
             GM M+WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCR
Sbjct: 121 PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCR 180

Query: 181 VYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLK 240
           VYIRGKGS+KDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+K
Sbjct: 181 VYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVK 240

Query: 241 PVDESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 289
           PVDESQDYIKRQQLRELA+LNS+ RE+SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 PVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot
Match: Q9ZVI3 (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.6e-123
Identity = 238/293 (81.23%), Postives = 255/293 (87.03%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQA 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQ 
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQ- 60

Query: 61  SSLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLS 120
                E+ RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS
Sbjct: 61  -----EMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLS 120

Query: 121 RATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGC 180
              GMTMDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGC
Sbjct: 121 GTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGC 180

Query: 181 RVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELL 240
           RV+IRGKGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELL
Sbjct: 181 RVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELL 240

Query: 241 KPVDESQDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 288
           KPVDESQD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 KPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot
Match: Q75GR5 (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 3.4e-110
Identity = 206/289 (71.28%), Postives = 237/289 (82.01%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTP-DGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASS 60
           MSG+Y   FSPAR  SP IR+ P D DSQYL+ELLAEHQK GPFMQVLPICS+LL+Q   
Sbjct: 1   MSGLYSPGFSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQ--- 60

Query: 61  LNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRA 120
              EI+RVS ++ N GF D DR R RSPSPM+S N  SN S  G S WNGL QE RL   
Sbjct: 61  ---EIMRVSSIVHNHGFGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWNGLHQE-RLGFP 120

Query: 121 TGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRV 180
            G +MDWQ AP SPSS  VK+ILRL++PVD+YPNFNFVGR+LGPRGNSLKRVE +TGCRV
Sbjct: 121 QGTSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRV 180

Query: 181 YIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKP 240
           +IRGKGS+KDP KE+KLRG+PGYEHL++PLHILIEA+ PA+I+D RLR AQE+IEELLKP
Sbjct: 181 FIRGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKP 240

Query: 241 VDESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 289
           VDESQD+ KRQQLRELAMLNS+ REDSP P GSVSPF++ GMKRAKTG+
Sbjct: 241 VDESQDFYKRQQLRELAMLNSTLREDSPHP-GSVSPFSNGGMKRAKTGQ 281

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot
Match: Q0WLR1 (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 3.3e-73
Identity = 150/280 (53.57%), Postives = 194/280 (69.29%), Query Frame = 0


Query: 8   NFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSLNAEILRV 67
           NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQ      EILRV
Sbjct: 43  NFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQ------EILRV 102

Query: 68  SGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDW 127
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P E+ +S  +    +W
Sbjct: 103 TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVS--SSPAPNW 162

Query: 128 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 187
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 163 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 222

Query: 188 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 247
           +KDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL PV+E+ D+
Sbjct: 223 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 282

Query: 248 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKT 287
            K+QQLRELA+LN S RE+     GS+SP+NS GMKRAKT
Sbjct: 283 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot
Match: Q9FKT4 (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.1e-72
Identity = 146/260 (56.15%), Postives = 185/260 (71.15%), Query Frame = 0


Query: 28  QYLSELLAEHQKFGPFMQVLPICSRLLNQASSLNAEILRVSGMMSNQGFCDLDRLRHRSP 87
           +YLSELLAE  K  PF+ VLP   RLLNQ      EILRV+ ++ N        L H  P
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQ------EILRVTTLLENATVLSQSGLDH--P 123

Query: 88  SPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEI 147
           SP+AS  +  N +   ++GW +  P E+ +  + G   +W ++P S S L  KR +R++I
Sbjct: 124 SPLASGGIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDI 183

Query: 148 PVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLN 207
           PVD YPNFNFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP KEE +RG+PGYEHLN
Sbjct: 184 PVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLN 243

Query: 208 EPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDS 267
           EPLHIL+EA+LP  IVD RL QA+EI+++LL P++E+ D  K+QQLRELA+LN + RE+ 
Sbjct: 244 EPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEG 303

Query: 268 PGPGGSVSPFNSSGMKRAKT 287
               GSVSP+NS GMKRAKT
Sbjct: 304 SPMSGSVSPYNSLGMKRAKT 312

[Close]

BLAST of Cp4.1LG10g07270 vs. NCBI nr
Match: KAG7033700.1 (KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572 bits (1475), Expect = 8.08e-206
Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
           NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288

[Close]

BLAST of Cp4.1LG10g07270 vs. NCBI nr
Match: XP_022950933.1 (KH domain-containing protein At2g38610-like isoform X1 [Cucurbita moschata] >XP_023543333.1 KH domain-containing protein At2g38610-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 556 bits (1432), Expect = 2.32e-199
Identity = 282/288 (97.92%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG10g07270 vs. NCBI nr
Match: XP_022978251.1 (KH domain-containing protein At2g38610-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 554 bits (1428), Expect = 9.46e-199
Identity = 281/288 (97.57%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG10g07270 vs. NCBI nr
Match: XP_022950934.1 (KH domain-containing protein At2g38610-like isoform X2 [Cucurbita moschata] >XP_023543334.1 KH domain-containing protein At2g38610-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG6603519.1 KH domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 549 bits (1415), Expect = 8.74e-197
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG10g07270 vs. NCBI nr
Match: XP_022978253.1 (KH domain-containing protein At2g38610-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 548 bits (1411), Expect = 3.56e-196
Identity = 280/288 (97.22%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL
Match: A0A6J1GG96 (KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453879 PE=4 SV=1)

HSP 1 Score: 556 bits (1432), Expect = 1.12e-199
Identity = 282/288 (97.92%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL
Match: A0A6J1IM72 (KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478291 PE=4 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 4.58e-199
Identity = 281/288 (97.57%), Postives = 282/288 (97.92%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL
Match: A0A6J1GH93 (KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453879 PE=4 SV=1)

HSP 1 Score: 549 bits (1415), Expect = 4.23e-197
Identity = 281/288 (97.57%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL
Match: A0A6J1ISI3 (KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478291 PE=4 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 1.72e-196
Identity = 280/288 (97.22%), Postives = 281/288 (97.57%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRL+HRSPSPMASSNLISNVSTTGLSGWNGLPQE RLSRAT
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLQHRSPSPMASSNLISNVSTTGLSGWNGLPQE-RLSRAT 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 281

[Close]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL
Match: A0A6J1EB88 (KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432543 PE=4 SV=1)

HSP 1 Score: 535 bits (1379), Expect = 1.35e-191
Identity = 271/288 (94.10%), Postives = 274/288 (95.14%), Query Frame = 0


Query: 1   MSGMYGTNFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSL 60
           MSGMY TNFSPARTASPHIRTTPD DSQYLSELLAEHQKFGPFMQVLPICSRLLNQ    
Sbjct: 1   MSGMYSTNFSPARTASPHIRTTPDVDSQYLSELLAEHQKFGPFMQVLPICSRLLNQ---- 60

Query: 61  NAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSRAT 120
             EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVS+ GLSGWNGLPQEQRLSR  
Sbjct: 61  --EILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSSAGLSGWNGLPQEQRLSRPP 120

Query: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180
           GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY
Sbjct: 121 GMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVY 180

Query: 181 IRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPV 240
           IRGKGS+KDPDKEEKLRGRPGYEHLNEPLHILIE DLP NIVDIRLRQAQEIIEELLKPV
Sbjct: 181 IRGKGSIKDPDKEEKLRGRPGYEHLNEPLHILIEGDLPVNIVDIRLRQAQEIIEELLKPV 240

Query: 241 DESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 288
           DES DYIKRQQLRELAMLNSSFRE+SPGPGGSVSPFNSSGMKRAKTGR
Sbjct: 241 DESHDYIKRQQLRELAMLNSSFREESPGPGGSVSPFNSSGMKRAKTGR 282

[Close]

BLAST of Cp4.1LG10g07270 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 444.1 bits (1141), Expect = 8.4e-125
Identity = 227/290 (78.28%), Postives = 250/290 (86.21%), Query Frame = 0


Query: 1   MSGMYG-TNFSPARTASPHIRT-TPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQAS 60
           MSG+Y   NFSP+R ASP IRT + D DSQY+S+LLAEHQK GPFMQVLPICSRLLNQ  
Sbjct: 1   MSGLYNYNNFSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQ-- 60

Query: 61  SLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLSR 120
               EI R++GMM NQGF D DRLRHRSPSPMAS NL+SNVS  GL GWNGLP E R+  
Sbjct: 61  ----EIFRITGMMPNQGFTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWNGLPPE-RIGG 120

Query: 121 ATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCR 180
             GM M+WQ APASPSS  VKRILRL++PVDTYPNFNFVGRLLGPRGNSLKRVE TTGCR
Sbjct: 121 PHGMAMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCR 180

Query: 181 VYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLK 240
           VYIRGKGS+KDP+KEEKL+G+PGYEHLNE LHILIEADLP +IVDI+LRQAQEIIEEL+K
Sbjct: 181 VYIRGKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVK 240

Query: 241 PVDESQDYIKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKTGR 289
           PVDESQDYIKRQQLRELA+LNS+ RE+SPGP GSVSPFNS+ MKR KTGR
Sbjct: 241 PVDESQDYIKRQQLRELALLNSNLRENSPGPSGSVSPFNSNAMKRPKTGR 283

[Close]

BLAST of Cp4.1LG10g07270 vs. TAIR 10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-124
Identity = 238/293 (81.23%), Postives = 255/293 (87.03%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQA 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQ 
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQ- 60

Query: 61  SSLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLS 120
                E+ RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS
Sbjct: 61  -----EMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLS 120

Query: 121 RATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGC 180
              GMTMDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGC
Sbjct: 121 GTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGC 180

Query: 181 RVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELL 240
           RV+IRGKGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELL
Sbjct: 181 RVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELL 240

Query: 241 KPVDESQDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 288
           KPVDESQD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 KPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG10g07270 vs. TAIR 10
Match: AT2G38610.2 (RNA-binding KH domain-containing protein )

HSP 1 Score: 443.7 bits (1140), Expect = 1.1e-124
Identity = 238/293 (81.23%), Postives = 255/293 (87.03%), Query Frame = 0


Query: 1   MSGMYGTN--FSPARTASPHIRTTPDGD-SQYLSELLAEHQKFGPFMQVLPICSRLLNQA 60
           MSG+Y  +  FSPAR ASP IR+TP+ D SQYL+ELLAEHQK  PFMQVLPICSRLLNQ 
Sbjct: 1   MSGLYNNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQ- 60

Query: 61  SSLNAEILRVSGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGWNGLPQEQRLS 120
                E+ RVSGMMSNQGF D DRLRHRSPSPMASSNL+SNVS TGL GWNGL QE RLS
Sbjct: 61  -----EMFRVSGMMSNQGFGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLSQE-RLS 120

Query: 121 RATGMTMDWQSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGC 180
              GMTMDWQ AP SPSS TVKRILRLEIPVD YPNFNFVGRLLGPRGNSLKRVE TTGC
Sbjct: 121 GTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGC 180

Query: 181 RVYIRGKGSVKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELL 240
           RV+IRGKGS+KDP+KE+KLRGRPGYEHLNE LHILIEADLPA+IV+IRLRQAQEIIEELL
Sbjct: 181 RVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELL 240

Query: 241 KPVDESQDYIKRQQLRELAMLNS-SFREDSPGP--GGSVSPFNSSGMKRAKTG 288
           KPVDESQD+IKRQQLRELA+LNS + RE+SPGP  GGSVSPFNSSG KR KTG
Sbjct: 241 KPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSSG-KRPKTG 285

[Close]

BLAST of Cp4.1LG10g07270 vs. TAIR 10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 276.6 bits (706), Expect = 2.3e-74
Identity = 150/280 (53.57%), Postives = 194/280 (69.29%), Query Frame = 0


Query: 8   NFSPARTASPHIRTTPDGDSQYLSELLAEHQKFGPFMQVLPICSRLLNQASSLNAEILRV 67
           NFS    + P      +   +YLSELLAE  K  PF+ VLP   RL+NQ      EILRV
Sbjct: 43  NFSGGLRSQPSFLVEQE---KYLSELLAERHKLTPFLPVLPHVCRLMNQ------EILRV 102

Query: 68  SGMMSNQGFCDLDRLRHRSPSPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDW 127
           + ++ N     L + R   PSP+AS  +  N S   ++GW +  P E+ +S  +    +W
Sbjct: 103 TTLLENA----LSQSRFDHPSPLASGGIFQN-SRADMNGWASQFPSERSVS--SSPAPNW 162

Query: 128 QSAPASPSSLTVKRILRLEIPVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGS 187
            ++P S S L VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRVE +T CRV IRG+GS
Sbjct: 163 LNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGS 222

Query: 188 VKDPDKEEKLRGRPGYEHLNEPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDY 247
           +KDP KE+ +RG+PGYEHLNEPLHIL+EA+LP  IVD RL QA+EI+++LL PV+E+ D+
Sbjct: 223 IKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPVEETHDF 282

Query: 248 IKRQQLRELAMLNSSFREDSPGPGGSVSPFNSSGMKRAKT 287
            K+QQLRELA+LN S RE+     GS+SP+NS GMKRAKT
Sbjct: 283 YKKQQLRELALLNGSLREEGSPMSGSISPYNSLGMKRAKT 306

[Close]

BLAST of Cp4.1LG10g07270 vs. TAIR 10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 273.9 bits (699), Expect = 1.5e-73
Identity = 146/260 (56.15%), Postives = 185/260 (71.15%), Query Frame = 0


Query: 28  QYLSELLAEHQKFGPFMQVLPICSRLLNQASSLNAEILRVSGMMSNQGFCDLDRLRHRSP 87
           +YLSELLAE  K  PF+ VLP   RLLNQ      EILRV+ ++ N        L H  P
Sbjct: 64  KYLSELLAERHKLTPFLPVLPHAFRLLNQ------EILRVTTLLENATVLSQSGLDH--P 123

Query: 88  SPMASSNLISNVSTTGLSGW-NGLPQEQRLSRATGMTMDWQSAPASPSSLTVKRILRLEI 147
           SP+AS  +  N +   ++GW +  P E+ +  + G   +W ++P S S L  KR +R++I
Sbjct: 124 SPLASGGIFQN-ARADMNGWASQFPSERSVPSSPG--PNWLNSPGSSSGLIAKRTIRVDI 183

Query: 148 PVDTYPNFNFVGRLLGPRGNSLKRVEVTTGCRVYIRGKGSVKDPDKEEKLRGRPGYEHLN 207
           PVD YPNFNFVGRLLGPRGNSLKRVE +T CRV IRG+GS+KDP KEE +RG+PGYEHLN
Sbjct: 184 PVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLN 243

Query: 208 EPLHILIEADLPANIVDIRLRQAQEIIEELLKPVDESQDYIKRQQLRELAMLNSSFREDS 267
           EPLHIL+EA+LP  IVD RL QA+EI+++LL P++E+ D  K+QQLRELA+LN + RE+ 
Sbjct: 244 EPLHILVEAELPIEIVDARLMQAREILDDLLTPMEETHDMYKKQQLRELALLNGTLREEG 303

Query: 268 PGPGGSVSPFNSSGMKRAKT 287
               GSVSP+NS GMKRAKT
Sbjct: 304 SPMSGSVSPYNSLGMKRAKT 312

The following BLAST results are available for this feature:

BLAST of Cp4.1LG10g07270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GYR4	1.2e-123	78.28	KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08...	[more]
Q9ZVI3	1.6e-123	81.23	KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38...	[more]
Q75GR5	3.4e-110	71.28	KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S...	[more]
Q0WLR1	3.3e-73	53.57	KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26...	[more]
Q9FKT4	2.1e-72	56.15	KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56...	[more]

BLAST of Cp4.1LG10g07270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7033700.1	8.08e-206	100.00	KH domain-containing protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022950933.1	2.32e-199	97.92	KH domain-containing protein At2g38610-like isoform X1 [Cucurbita moschata] >XP_...	[more]
XP_022978251.1	9.46e-199	97.57	KH domain-containing protein At2g38610-like isoform X1 [Cucurbita maxima]	[more]
XP_022950934.1	8.74e-197	97.57	KH domain-containing protein At2g38610-like isoform X2 [Cucurbita moschata] >XP_...	[more]
XP_022978253.1	3.56e-196	97.22	KH domain-containing protein At2g38610-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Cp4.1LG10g07270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GG96	1.12e-199	97.92	KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1IM72	4.58e-199	97.57	KH domain-containing protein At2g38610-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1GH93	4.23e-197	97.57	KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1ISI3	1.72e-196	97.22	KH domain-containing protein At2g38610-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1EB88	1.35e-191	94.10	KH domain-containing protein At3g08620-like isoform X1 OS=Cucurbita moschata OX=...	[more]

BLAST of Cp4.1LG10g07270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08620.1	8.4e-125	78.28	RNA-binding KH domain-containing protein	[more]
AT2G38610.1	1.1e-124	81.23	RNA-binding KH domain-containing protein	[more]
AT2G38610.2	1.1e-124	81.23	RNA-binding KH domain-containing protein	[more]
AT4G26480.1	2.3e-74	53.57	RNA-binding KH domain-containing protein	[more]
AT5G56140.1	1.5e-73	56.15	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 138..238 e-value: 1.0E-5 score: 35.0
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 20..269 e-value: 1.0E-66 score: 226.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 145..261
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 155..191 e-value: 1.2E-4 score: 21.8
IPR032377	STAR protein, homodimerisation region	PFAM	PF16544	STAR_dimer	coord: 23..76 e-value: 1.9E-9 score: 37.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..288
None	No IPR available	PANTHER	PTHR11208:SF114	STAR PROTEIN, HOMODIMERIZATION REGION-RELATED	coord: 2..288
None	No IPR available	CDD	cd02395	SF1_like-KH	coord: 143..263 e-value: 8.68466E-55 score: 171.658
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 2..288

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG10g07270.1	Cp4.1LG10g07270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding