Cp4.1LG10g05970 (gene) Cucurbita pepo (MU‐CU‐16) v4.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGATAAAAAAGAAGAGCAAGAAGAAAAAGAAGAAGACGACAGCCAGGTTTGAAAGCAATGGCAATAACAATAACAAGGGAAGAGTTTTCTCCGTGATGCTCCCAAAGGGCTTTGTCCCTCCCTCTGGCTCGTCTCCTTGCCACAACCAAAACCCTCAGTCATCATCTCCCGCCTTTTACTGCCATCTCTCTGCTGCCACCCACCGCCCTTGA ATGGCGATAAAAAAGAAGAGCAAGAAGAAAAAGAAGAAGACGACAGCCAGGTTTGAAAGCAATGGCAATAACAATAACAAGGGAAGAGTTTTCTCCGTGATGCTCCCAAAGGGCTTTGTCCCTCCCTCTGGCTCGTCTCCTTGCCACAACCAAAACCCTCAGTCATCATCTCCCGCCTTTTACTGCCATCTCTCTGCTGCCACCCACCGCCCTTGA ATGGCGATAAAAAAGAAGAGCAAGAAGAAAAAGAAGAAGACGACAGCCAGGTTTGAAAGCAATGGCAATAACAATAACAAGGGAAGAGTTTTCTCCGTGATGCTCCCAAAGGGCTTTGTCCCTCCCTCTGGCTCGTCTCCTTGCCACAACCAAAACCCTCAGTCATCATCTCCCGCCTTTTACTGCCATCTCTCTGCTGCCACCCACCGCCCTTGA MAIKKKSKKKKKKTTARFESNGNNNNKGRVFSVMLPKGFVPPSGSSPCHNQNPQSSSPAFYCHLSAATHRP Homology
BLAST of Cp4.1LG10g05970 vs. NCBI nr
Match: KAG7034719.1 (hypothetical protein SDJN02_04449, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 131 bits (330), Expect = 2.62e-38 Identity = 66/71 (92.96%), Postives = 68/71 (95.77%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. NCBI nr
Match: KAG6581427.1 (hypothetical protein SDJN03_21429, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 129 bits (324), Expect = 1.87e-36 Identity = 65/71 (91.55%), Postives = 67/71 (94.37%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. NCBI nr
Match: KAA0052545.1 (hypothetical protein E6C27_scaffold120G001480 [Cucumis melo var. makuwa] >TYK13280.1 hypothetical protein E5676_scaffold255G008990 [Cucumis melo var. makuwa]) HSP 1 Score: 83.2 bits (204), Expect = 4.21e-18 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. NCBI nr
Match: KGN49393.1 (hypothetical protein Csa_004373 [Cucumis sativus]) HSP 1 Score: 77.8 bits (190), Expect = 5.39e-16 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. NCBI nr
Match: KAG7026467.1 (hypothetical protein SDJN02_10467, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 68.2 bits (165), Expect = 1.33e-12 Identity = 31/41 (75.61%), Postives = 33/41 (80.49%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. ExPASy TrEMBL
Match: A0A5A7UFQ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008990 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.04e-18 Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. ExPASy TrEMBL
Match: A0A0A0KIK1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G523350 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.61e-16 Identity = 34/42 (80.95%), Postives = 37/42 (88.10%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. ExPASy TrEMBL
Match: V7BTK0 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_006G164500g PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.47e-12 Identity = 29/38 (76.32%), Postives = 32/38 (84.21%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. ExPASy TrEMBL
Match: A0A6A2XAG3 (Alpha-mannosidase 3 isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00117032pilonHSYRG00130 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 5.75e-12 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. ExPASy TrEMBL
Match: A0A444WWS8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_B10g100459 PE=4 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 6.40e-12 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
BLAST of Cp4.1LG10g05970 vs. TAIR 10
Match: AT4G18335.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 4.2e-09 Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo (Zucchini) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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